HEADER TRANSFERASE 01-FEB-19 6QLH TITLE CRYSTAL STRUCTURE OF UBIX IN COMPLEX WITH REDUCED FMN AND ISOPENTYL TITLE 2 MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN PRENYLTRANSFERASE UBIX; COMPND 3 CHAIN: A; COMPND 4 EC: 2.5.1.129; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: UBIX, C0044_29760, C8257_05245, CAZ10_26235, CGU42_07325, SOURCE 5 DT376_15100, DZ940_19110, DZ962_23875, NCTC13719_00955, SOURCE 6 PAERUG_E15_LONDON_28_01_14_05236, PAMH19_1010, RW109_RW109_01660; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIX PRENYLTRANSFERASE FLAVIN BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.MARSHALL,D.LEYS REVDAT 3 24-JAN-24 6QLH 1 LINK REVDAT 2 12-JUN-19 6QLH 1 JRNL REVDAT 1 05-JUN-19 6QLH 0 JRNL AUTH S.A.MARSHALL,K.A.P.PAYNE,K.FISHER,M.D.WHITE,A.NI CHEALLAIGH, JRNL AUTH 2 A.BALAIKAITE,S.E.J.RIGBY,D.LEYS JRNL TITL THE UBIX FLAVIN PRENYLTRANSFERASE REACTION MECHANISM JRNL TITL 2 RESEMBLES CLASS I TERPENE CYCLASE CHEMISTRY. JRNL REF NAT COMMUN V. 10 2357 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31142738 JRNL DOI 10.1038/S41467-019-10220-1 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 32908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.0300 - 3.5900 1.00 2692 163 0.1347 0.1329 REMARK 3 2 3.5900 - 2.8500 1.00 2665 131 0.1464 0.1898 REMARK 3 3 2.8500 - 2.4900 1.00 2638 149 0.1623 0.1657 REMARK 3 4 2.4900 - 2.2600 1.00 2616 121 0.1596 0.1848 REMARK 3 5 2.2600 - 2.1000 1.00 2639 134 0.1644 0.1848 REMARK 3 6 2.1000 - 1.9800 0.99 2529 182 0.1852 0.2356 REMARK 3 7 1.9800 - 1.8800 0.99 2595 155 0.2009 0.2094 REMARK 3 8 1.8800 - 1.8000 0.99 2581 144 0.2190 0.2268 REMARK 3 9 1.8000 - 1.7300 0.99 2568 136 0.2504 0.2913 REMARK 3 10 1.7300 - 1.6700 0.98 2575 139 0.2833 0.3221 REMARK 3 11 1.6700 - 1.6200 0.98 2531 131 0.2968 0.3984 REMARK 3 12 1.6200 - 1.5700 0.98 2548 146 0.3223 0.3524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.181 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.298 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1631 REMARK 3 ANGLE : 0.757 2230 REMARK 3 CHIRALITY : 0.047 256 REMARK 3 PLANARITY : 0.004 291 REMARK 3 DIHEDRAL : 3.107 1356 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QLH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100152. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33160 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 24.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.10610 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ZAF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SG1 SCREEN (MOLECULAR DIMENSIONS) F4 1 REMARK 280 M SODIUM CITRATE TRIBASIC DIHYDRATE, 0.1 M SODIUM CACODYLATE, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z+1/2 REMARK 290 15555 -X,Y+1/2,-Z+1/2 REMARK 290 16555 X,-Y+1/2,-Z+1/2 REMARK 290 17555 Z,X+1/2,Y+1/2 REMARK 290 18555 Z,-X+1/2,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y+1/2 REMARK 290 20555 -Z,X+1/2,-Y+1/2 REMARK 290 21555 Y,Z+1/2,X+1/2 REMARK 290 22555 -Y,Z+1/2,-X+1/2 REMARK 290 23555 Y,-Z+1/2,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X+1/2 REMARK 290 25555 X+1/2,Y,Z+1/2 REMARK 290 26555 -X+1/2,-Y,Z+1/2 REMARK 290 27555 -X+1/2,Y,-Z+1/2 REMARK 290 28555 X+1/2,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X,Y+1/2 REMARK 290 30555 Z+1/2,-X,-Y+1/2 REMARK 290 31555 -Z+1/2,-X,Y+1/2 REMARK 290 32555 -Z+1/2,X,-Y+1/2 REMARK 290 33555 Y+1/2,Z,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X+1/2 REMARK 290 35555 Y+1/2,-Z,-X+1/2 REMARK 290 36555 -Y+1/2,-Z,X+1/2 REMARK 290 37555 X+1/2,Y+1/2,Z REMARK 290 38555 -X+1/2,-Y+1/2,Z REMARK 290 39555 -X+1/2,Y+1/2,-Z REMARK 290 40555 X+1/2,-Y+1/2,-Z REMARK 290 41555 Z+1/2,X+1/2,Y REMARK 290 42555 Z+1/2,-X+1/2,-Y REMARK 290 43555 -Z+1/2,-X+1/2,Y REMARK 290 44555 -Z+1/2,X+1/2,-Y REMARK 290 45555 Y+1/2,Z+1/2,X REMARK 290 46555 -Y+1/2,Z+1/2,-X REMARK 290 47555 Y+1/2,-Z+1/2,-X REMARK 290 48555 -Y+1/2,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY1 37 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 37 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY3 37 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 38 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 38 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY3 38 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 39 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 39 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY3 39 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 40 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY2 40 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY3 40 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 41 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY2 41 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 41 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 42 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY2 42 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 42 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 43 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY2 43 -1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 43 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 44 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY2 44 1.000000 0.000000 0.000000 71.06200 REMARK 290 SMTRY3 44 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 45 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY2 45 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY3 45 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 46 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY2 46 0.000000 0.000000 1.000000 71.06200 REMARK 290 SMTRY3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 47 0.000000 1.000000 0.000000 71.06200 REMARK 290 SMTRY2 47 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY3 47 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 48 0.000000 -1.000000 0.000000 71.06200 REMARK 290 SMTRY2 48 0.000000 0.000000 -1.000000 71.06200 REMARK 290 SMTRY3 48 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -450.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -142.12400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -142.12400 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 -71.06200 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 71.06200 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 -71.06200 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 -71.06200 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 -71.06200 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 71.06200 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 -71.06200 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 -71.06200 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 71.06200 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 -71.06200 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 -71.06200 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 -71.06200 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 71.06200 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 -71.06200 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 -71.06200 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 -71.06200 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 547 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 549 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 553 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 559 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 597 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 VAL A -10 REMARK 465 ASP A -9 REMARK 465 LEU A -8 REMARK 465 GLY A -7 REMARK 465 THR A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 GLU A 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 40 CG CD CE NZ REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 597 DISTANCE = 6.59 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 117 OD1 REMARK 620 2 HOH A 411 O 97.3 REMARK 620 3 HOH A 430 O 79.0 100.6 REMARK 620 4 HOH A 436 O 90.5 168.8 88.8 REMARK 620 5 HOH A 481 O 164.8 81.6 86.2 93.0 REMARK 620 6 HOH A 511 O 111.1 87.9 166.1 81.8 84.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IP8 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FNR A 303 DBREF1 6QLH A 1 209 UNP A0A072ZCW8_PSEAI DBREF2 6QLH A A0A072ZCW8 1 209 SEQADV 6QLH MET A -20 UNP A0A072ZCW INITIATING METHIONINE SEQADV 6QLH HIS A -19 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH HIS A -18 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH HIS A -17 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH HIS A -16 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH HIS A -15 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH HIS A -14 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH SER A -13 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH SER A -12 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH GLY A -11 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH VAL A -10 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH ASP A -9 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH LEU A -8 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH GLY A -7 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH THR A -6 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH GLU A -5 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH ASN A -4 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH LEU A -3 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH TYR A -2 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH GLN A -1 UNP A0A072ZCW EXPRESSION TAG SEQADV 6QLH SER A 0 UNP A0A072ZCW EXPRESSION TAG SEQRES 1 A 230 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 230 GLY THR GLU ASN LEU TYR GLN SER MET SER GLY PRO GLU SEQRES 3 A 230 ARG ILE THR LEU ALA MET THR GLY ALA SER GLY ALA GLN SEQRES 4 A 230 TYR GLY LEU ARG LEU LEU ASP CYS LEU VAL GLN GLU GLU SEQRES 5 A 230 ARG GLU VAL HIS PHE LEU ILE SER LYS ALA ALA GLN LEU SEQRES 6 A 230 VAL MET ALA THR GLU THR ASP VAL ALA LEU PRO ALA LYS SEQRES 7 A 230 PRO GLN ALA MET GLN ALA PHE LEU THR GLU TYR CYS GLY SEQRES 8 A 230 ALA ALA ALA GLY GLN ILE ARG VAL PHE GLY GLN ASN ASP SEQRES 9 A 230 TRP MET ALA PRO PRO ALA SER GLY SER SER ALA PRO ASN SEQRES 10 A 230 ALA MET VAL ILE CYS PRO CYS SER THR GLY THR LEU SER SEQRES 11 A 230 ALA VAL ALA THR GLY ALA CYS ASN ASN LEU ILE GLU ARG SEQRES 12 A 230 ALA ALA ASP VAL ALA LEU LYS GLU ARG ARG PRO LEU VAL SEQRES 13 A 230 LEU VAL PRO ARG GLU ALA PRO PHE SER SER ILE HIS LEU SEQRES 14 A 230 GLU ASN MET LEU LYS LEU SER ASN LEU GLY ALA VAL ILE SEQRES 15 A 230 LEU PRO ALA ALA PRO GLY PHE TYR HIS GLN PRO GLN SER SEQRES 16 A 230 VAL GLU ASP LEU VAL ASP PHE VAL VAL ALA ARG ILE LEU SEQRES 17 A 230 ASN THR LEU GLY ILE PRO GLN ASP MET LEU PRO ARG TRP SEQRES 18 A 230 GLY GLU GLN HIS LEU VAL SER ASP GLU HET NA A 301 1 HET IP8 A 302 10 HET FNR A 303 31 HETNAM NA SODIUM ION HETNAM IP8 ISOPENTENYL PHOSPHATE HETNAM FNR 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 FNR BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D- HETNAM 3 FNR RIBITOL HETSYN IP8 3-METHYLBUT-3-EN-1-YL DIHYDROGEN PHOSPHATE HETSYN FNR TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE FORMUL 2 NA NA 1+ FORMUL 3 IP8 C5 H11 O4 P FORMUL 4 FNR C17 H23 N4 O9 P FORMUL 5 HOH *197(H2 O) HELIX 1 AA1 GLY A 16 GLU A 30 1 15 HELIX 2 AA2 SER A 39 THR A 50 1 12 HELIX 3 AA3 LYS A 57 GLY A 70 1 14 HELIX 4 AA4 ALA A 86 SER A 90 5 5 HELIX 5 AA5 SER A 104 GLY A 114 1 11 HELIX 6 AA6 ASN A 118 ARG A 131 1 14 HELIX 7 AA7 SER A 144 LEU A 157 1 14 HELIX 8 AA8 SER A 174 GLY A 191 1 18 SHEET 1 AA1 6 ILE A 76 VAL A 78 0 SHEET 2 AA1 6 GLU A 33 ILE A 38 1 N PHE A 36 O ARG A 77 SHEET 3 AA1 6 ARG A 6 MET A 11 1 N ILE A 7 O GLU A 33 SHEET 4 AA1 6 ALA A 97 CYS A 103 1 O ALA A 97 N THR A 8 SHEET 5 AA1 6 LEU A 134 PRO A 138 1 O VAL A 135 N ILE A 100 SHEET 6 AA1 6 VAL A 160 ILE A 161 1 O VAL A 160 N LEU A 134 LINK OD1 ASN A 117 NA NA A 301 1555 1555 2.26 LINK NA NA A 301 O HOH A 411 1555 1555 2.50 LINK NA NA A 301 O HOH A 430 1555 18544 2.52 LINK NA NA A 301 O HOH A 436 1555 18544 2.47 LINK NA NA A 301 O HOH A 481 1555 18544 2.29 LINK NA NA A 301 O HOH A 511 1555 1555 2.40 CISPEP 1 CYS A 101 PRO A 102 0 -3.45 CISPEP 2 ALA A 141 PRO A 142 0 -9.58 SITE 1 AC1 6 ASN A 117 HOH A 411 HOH A 430 HOH A 436 SITE 2 AC1 6 HOH A 481 HOH A 511 SITE 1 AC2 13 TRP A 84 ALA A 89 SER A 90 GLY A 91 SITE 2 AC2 13 ARG A 122 LYS A 129 ARG A 139 GLU A 140 SITE 3 AC2 13 TYR A 169 ARG A 185 TRP A 200 FNR A 303 SITE 4 AC2 13 HOH A 420 SITE 1 AC3 20 THR A 12 GLY A 13 ALA A 14 SER A 15 SITE 2 AC3 20 SER A 39 ALA A 41 LEU A 44 VAL A 45 SITE 3 AC3 20 TRP A 84 SER A 104 THR A 105 THR A 107 SITE 4 AC3 20 CYS A 116 ARG A 139 IP8 A 302 HOH A 409 SITE 5 AC3 20 HOH A 436 HOH A 453 HOH A 457 HOH A 492 CRYST1 142.124 142.124 142.124 90.00 90.00 90.00 F 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007036 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007036 0.00000