HEADER HYDROLASE 20-FEB-19 6QSC TITLE CRYSTAL STRUCTURE OF ARG470HIS MUTANT OF HUMAN PROLIDASE WITH MN IONS TITLE 2 AND GLYPRO LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: XAA-PRO DIPEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: X-PRO DIPEPTIDASE,IMIDODIPEPTIDASE,PEPTIDASE D,PROLINE COMPND 5 DIPEPTIDASE,PROLIDASE; COMPND 6 EC: 3.4.13.9; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PEPD, PRD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HYDROLASE, METAL BINDING, DIPEPTIDASE, MUTATION EXPDTA X-RAY DIFFRACTION AUTHOR P.WILK,E.WATOR,M.S.WEISS REVDAT 3 06-MAR-24 6QSC 1 JRNL REVDAT 2 24-JAN-24 6QSC 1 LINK REVDAT 1 18-MAR-20 6QSC 0 JRNL AUTH N.D.LINHARES,P.WILK,E.WATOR,M.A.TOSTES,M.S.WEISS,S.D.J.PENA JRNL TITL STRUCTURAL ANALYSIS OF NEW COMPOUND HETEROZYGOUS VARIANTS IN JRNL TITL 2 PEPD GENE IDENTIFIED IN A PATIENT WITH PROLIDASE DEFICIENCY JRNL TITL 3 DIAGNOSED BY EXOME SEQUENCING. JRNL REF GENET MOL BIOL V. 44 00393 2021 JRNL REFN ISSN 1415-4757 JRNL PMID 33877262 JRNL DOI 10.1590/1678-4685-GMB-2020-0393 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 165419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3696 - 3.8698 1.00 11309 146 0.1359 0.1405 REMARK 3 2 3.8698 - 3.0717 1.00 11040 142 0.1293 0.1657 REMARK 3 3 3.0717 - 2.6835 1.00 10948 141 0.1390 0.1528 REMARK 3 4 2.6835 - 2.4381 1.00 10957 140 0.1352 0.1512 REMARK 3 5 2.4381 - 2.2634 1.00 10874 140 0.1308 0.1688 REMARK 3 6 2.2634 - 2.1299 1.00 10882 140 0.1312 0.1487 REMARK 3 7 2.1299 - 2.0233 1.00 10871 140 0.1361 0.1728 REMARK 3 8 2.0233 - 1.9352 1.00 10834 139 0.1514 0.1721 REMARK 3 9 1.9352 - 1.8607 1.00 10896 140 0.1620 0.1843 REMARK 3 10 1.8607 - 1.7965 1.00 10800 139 0.1794 0.2244 REMARK 3 11 1.7965 - 1.7403 1.00 10834 139 0.1967 0.1909 REMARK 3 12 1.7403 - 1.6906 1.00 10867 140 0.2163 0.2056 REMARK 3 13 1.6906 - 1.6461 1.00 10784 138 0.2372 0.2891 REMARK 3 14 1.6461 - 1.6059 1.00 10856 140 0.2693 0.2799 REMARK 3 15 1.6059 - 1.5694 0.98 10567 136 0.3146 0.3684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 6 THROUGH 482) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6350 9.0587 81.7294 REMARK 3 T TENSOR REMARK 3 T11: 0.1705 T22: 0.1934 REMARK 3 T33: 0.1714 T12: 0.0166 REMARK 3 T13: -0.0039 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.2028 L22: 0.5107 REMARK 3 L33: 0.3798 L12: -0.0674 REMARK 3 L13: 0.0116 L23: 0.0381 REMARK 3 S TENSOR REMARK 3 S11: 0.0308 S12: -0.0149 S13: -0.0520 REMARK 3 S21: 0.0408 S22: 0.0246 S23: 0.0522 REMARK 3 S31: 0.0106 S32: -0.0047 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 6 THROUGH 488) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6211 40.2055 72.6359 REMARK 3 T TENSOR REMARK 3 T11: 0.1865 T22: 0.1796 REMARK 3 T33: 0.1697 T12: 0.0247 REMARK 3 T13: 0.0188 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.6014 L22: 0.4855 REMARK 3 L33: 0.1526 L12: 0.0068 REMARK 3 L13: -0.0544 L23: -0.0411 REMARK 3 S TENSOR REMARK 3 S11: 0.0265 S12: -0.0175 S13: 0.0758 REMARK 3 S21: -0.0148 S22: 0.0092 S23: 0.0045 REMARK 3 S31: -0.0509 S32: 0.0013 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 509 THROUGH 510) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7482 44.0375 77.5641 REMARK 3 T TENSOR REMARK 3 T11: 0.2647 T22: 0.2956 REMARK 3 T33: 0.3178 T12: 0.0240 REMARK 3 T13: 0.0013 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.0069 L22: 0.9142 REMARK 3 L33: 0.1839 L12: 0.0309 REMARK 3 L13: -0.0083 L23: 0.3288 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.0093 S13: 0.0017 REMARK 3 S21: -0.0091 S22: 0.0084 S23: -0.0038 REMARK 3 S31: 0.0032 S32: -0.0027 S33: -0.0029 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 506 THROUGH 507) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8225 5.4524 76.3141 REMARK 3 T TENSOR REMARK 3 T11: 0.2665 T22: 0.2981 REMARK 3 T33: 0.2624 T12: 0.0182 REMARK 3 T13: -0.0367 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.0526 L22: 0.1655 REMARK 3 L33: 0.0043 L12: -0.0820 REMARK 3 L13: 0.0131 L23: -0.0264 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: 0.0026 S13: 0.0033 REMARK 3 S21: -0.0037 S22: -0.0047 S23: 0.0078 REMARK 3 S31: -0.0031 S32: 0.0055 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QSC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : KMC-1 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 165436 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.569 REMARK 200 RESOLUTION RANGE LOW (A) : 48.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.490 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.66 REMARK 200 R MERGE FOR SHELL (I) : 1.21200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5M4Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM NATETRABORATE, 690-760MM REMARK 280 NACITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.77400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 105.77400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.77050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.35700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.77050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.35700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 105.77400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.77050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.35700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 105.77400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.77050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.35700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 975 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ASP A 483 REMARK 465 LYS A 484 REMARK 465 ALA A 485 REMARK 465 PHE A 486 REMARK 465 THR A 487 REMARK 465 PRO A 488 REMARK 465 PHE A 489 REMARK 465 SER A 490 REMARK 465 GLY A 491 REMARK 465 PRO A 492 REMARK 465 LYS A 493 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 THR B 5 REMARK 465 PHE B 489 REMARK 465 SER B 490 REMARK 465 GLY B 491 REMARK 465 PRO B 492 REMARK 465 LYS B 493 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 28 O HOH A 602 0.84 REMARK 500 HD2 ARG A 331 O HOH A 611 1.29 REMARK 500 C GLY A 506 N PRO A 507 1.34 REMARK 500 C GLY B 509 N PRO B 510 1.34 REMARK 500 OD1 ASP A 390 HH12 ARG A 395 1.47 REMARK 500 OE1 GLU A 131 O HOH A 601 1.51 REMARK 500 OE2 GLU B 453 HD1 HIS B 470 1.56 REMARK 500 NE2 GLN A 28 O HOH A 602 1.63 REMARK 500 CD ARG A 331 O HOH A 611 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 -125.87 49.86 REMARK 500 TYR A 57 -129.62 46.56 REMARK 500 CYS A 245 73.88 -119.27 REMARK 500 PRO A 262 57.13 -92.09 REMARK 500 PRO A 365 39.94 -91.45 REMARK 500 GLU A 412 59.64 -142.32 REMARK 500 ASN B 13 -126.77 52.35 REMARK 500 TYR B 57 -129.04 49.81 REMARK 500 CYS B 245 77.94 -118.38 REMARK 500 TYR B 256 150.48 -49.02 REMARK 500 PRO B 262 57.20 -92.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1158 DISTANCE = 5.87 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GLY A 506 REMARK 610 GLY B 509 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MH2 A 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 276 OD1 REMARK 620 2 MH2 A 500 O1 144.0 REMARK 620 3 ASP A 276 OD2 61.4 85.0 REMARK 620 4 ASP A 287 OD1 87.3 118.8 144.1 REMARK 620 5 GLY A 506 N 103.9 94.5 101.8 102.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 499 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 287 OD2 REMARK 620 2 HIS A 370 NE2 99.0 REMARK 620 3 GLU A 412 OE2 161.8 86.0 REMARK 620 4 GLU A 452 OE2 84.3 118.2 78.0 REMARK 620 5 MH2 A 500 O1 98.7 153.8 83.2 82.7 REMARK 620 6 GLY A 506 O 92.0 86.6 105.9 155.2 73.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MH2 B 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 276 OD1 REMARK 620 2 MH2 B 500 O1 151.7 REMARK 620 3 ASP B 276 OD2 60.7 91.0 REMARK 620 4 ASP B 287 OD1 83.6 124.7 144.3 REMARK 620 5 GLU B 452 OE1 103.5 85.5 110.8 73.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 499 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 287 OD2 REMARK 620 2 HIS B 370 NE2 97.1 REMARK 620 3 GLU B 412 OE2 162.7 84.6 REMARK 620 4 GLU B 452 OE2 83.9 117.3 80.1 REMARK 620 5 MH2 B 500 O1 102.9 152.0 82.2 84.5 REMARK 620 6 GLY B 509 O 91.7 85.7 105.6 156.9 74.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MH2 A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MH2 B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO B 510 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M4G RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: 5M4J RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: 5MBZ RELATED DB: PDB REMARK 900 RELATED MUTANT DBREF 6QSC A 1 493 UNP P12955 PEPD_HUMAN 1 493 DBREF 6QSC B 1 493 UNP P12955 PEPD_HUMAN 1 493 SEQADV 6QSC HIS A 470 UNP P12955 ARG 470 ENGINEERED MUTATION SEQADV 6QSC HIS B 470 UNP P12955 ARG 470 ENGINEERED MUTATION SEQRES 1 A 493 MET ALA ALA ALA THR GLY PRO SER PHE TRP LEU GLY ASN SEQRES 2 A 493 GLU THR LEU LYS VAL PRO LEU ALA LEU PHE ALA LEU ASN SEQRES 3 A 493 ARG GLN ARG LEU CYS GLU ARG LEU ARG LYS ASN PRO ALA SEQRES 4 A 493 VAL GLN ALA GLY SER ILE VAL VAL LEU GLN GLY GLY GLU SEQRES 5 A 493 GLU THR GLN ARG TYR CYS THR ASP THR GLY VAL LEU PHE SEQRES 6 A 493 ARG GLN GLU SER PHE PHE HIS TRP ALA PHE GLY VAL THR SEQRES 7 A 493 GLU PRO GLY CYS TYR GLY VAL ILE ASP VAL ASP THR GLY SEQRES 8 A 493 LYS SER THR LEU PHE VAL PRO ARG LEU PRO ALA SER HIS SEQRES 9 A 493 ALA THR TRP MET GLY LYS ILE HIS SER LYS GLU HIS PHE SEQRES 10 A 493 LYS GLU LYS TYR ALA VAL ASP ASP VAL GLN TYR VAL ASP SEQRES 11 A 493 GLU ILE ALA SER VAL LEU THR SER GLN LYS PRO SER VAL SEQRES 12 A 493 LEU LEU THR LEU ARG GLY VAL ASN THR ASP SER GLY SER SEQRES 13 A 493 VAL CYS ARG GLU ALA SER PHE ASP GLY ILE SER LYS PHE SEQRES 14 A 493 GLU VAL ASN ASN THR ILE LEU HIS PRO GLU ILE VAL GLU SEQRES 15 A 493 CYS ARG VAL PHE LYS THR ASP MET GLU LEU GLU VAL LEU SEQRES 16 A 493 ARG TYR THR ASN LYS ILE SER SER GLU ALA HIS ARG GLU SEQRES 17 A 493 VAL MET LYS ALA VAL LYS VAL GLY MET LYS GLU TYR GLU SEQRES 18 A 493 LEU GLU SER LEU PHE GLU HIS TYR CYS TYR SER ARG GLY SEQRES 19 A 493 GLY MET ARG HIS SER SER TYR THR CYS ILE CYS GLY SER SEQRES 20 A 493 GLY GLU ASN SER ALA VAL LEU HIS TYR GLY HIS ALA GLY SEQRES 21 A 493 ALA PRO ASN ASP ARG THR ILE GLN ASN GLY ASP MET CYS SEQRES 22 A 493 LEU PHE ASP MET GLY GLY GLU TYR TYR CYS PHE ALA SER SEQRES 23 A 493 ASP ILE THR CYS SER PHE PRO ALA ASN GLY LYS PHE THR SEQRES 24 A 493 ALA ASP GLN LYS ALA VAL TYR GLU ALA VAL LEU ARG SER SEQRES 25 A 493 SER ARG ALA VAL MET GLY ALA MET LYS PRO GLY VAL TRP SEQRES 26 A 493 TRP PRO ASP MET HIS ARG LEU ALA ASP ARG ILE HIS LEU SEQRES 27 A 493 GLU GLU LEU ALA HIS MET GLY ILE LEU SER GLY SER VAL SEQRES 28 A 493 ASP ALA MET VAL GLN ALA HIS LEU GLY ALA VAL PHE MET SEQRES 29 A 493 PRO HIS GLY LEU GLY HIS PHE LEU GLY ILE ASP VAL HIS SEQRES 30 A 493 ASP VAL GLY GLY TYR PRO GLU GLY VAL GLU ARG ILE ASP SEQRES 31 A 493 GLU PRO GLY LEU ARG SER LEU ARG THR ALA ARG HIS LEU SEQRES 32 A 493 GLN PRO GLY MET VAL LEU THR VAL GLU PRO GLY ILE TYR SEQRES 33 A 493 PHE ILE ASP HIS LEU LEU ASP GLU ALA LEU ALA ASP PRO SEQRES 34 A 493 ALA ARG ALA SER PHE LEU ASN ARG GLU VAL LEU GLN ARG SEQRES 35 A 493 PHE ARG GLY PHE GLY GLY VAL ARG ILE GLU GLU ASP VAL SEQRES 36 A 493 VAL VAL THR ASP SER GLY ILE GLU LEU LEU THR CYS VAL SEQRES 37 A 493 PRO HIS THR VAL GLU GLU ILE GLU ALA CYS MET ALA GLY SEQRES 38 A 493 CYS ASP LYS ALA PHE THR PRO PHE SER GLY PRO LYS SEQRES 1 B 493 MET ALA ALA ALA THR GLY PRO SER PHE TRP LEU GLY ASN SEQRES 2 B 493 GLU THR LEU LYS VAL PRO LEU ALA LEU PHE ALA LEU ASN SEQRES 3 B 493 ARG GLN ARG LEU CYS GLU ARG LEU ARG LYS ASN PRO ALA SEQRES 4 B 493 VAL GLN ALA GLY SER ILE VAL VAL LEU GLN GLY GLY GLU SEQRES 5 B 493 GLU THR GLN ARG TYR CYS THR ASP THR GLY VAL LEU PHE SEQRES 6 B 493 ARG GLN GLU SER PHE PHE HIS TRP ALA PHE GLY VAL THR SEQRES 7 B 493 GLU PRO GLY CYS TYR GLY VAL ILE ASP VAL ASP THR GLY SEQRES 8 B 493 LYS SER THR LEU PHE VAL PRO ARG LEU PRO ALA SER HIS SEQRES 9 B 493 ALA THR TRP MET GLY LYS ILE HIS SER LYS GLU HIS PHE SEQRES 10 B 493 LYS GLU LYS TYR ALA VAL ASP ASP VAL GLN TYR VAL ASP SEQRES 11 B 493 GLU ILE ALA SER VAL LEU THR SER GLN LYS PRO SER VAL SEQRES 12 B 493 LEU LEU THR LEU ARG GLY VAL ASN THR ASP SER GLY SER SEQRES 13 B 493 VAL CYS ARG GLU ALA SER PHE ASP GLY ILE SER LYS PHE SEQRES 14 B 493 GLU VAL ASN ASN THR ILE LEU HIS PRO GLU ILE VAL GLU SEQRES 15 B 493 CYS ARG VAL PHE LYS THR ASP MET GLU LEU GLU VAL LEU SEQRES 16 B 493 ARG TYR THR ASN LYS ILE SER SER GLU ALA HIS ARG GLU SEQRES 17 B 493 VAL MET LYS ALA VAL LYS VAL GLY MET LYS GLU TYR GLU SEQRES 18 B 493 LEU GLU SER LEU PHE GLU HIS TYR CYS TYR SER ARG GLY SEQRES 19 B 493 GLY MET ARG HIS SER SER TYR THR CYS ILE CYS GLY SER SEQRES 20 B 493 GLY GLU ASN SER ALA VAL LEU HIS TYR GLY HIS ALA GLY SEQRES 21 B 493 ALA PRO ASN ASP ARG THR ILE GLN ASN GLY ASP MET CYS SEQRES 22 B 493 LEU PHE ASP MET GLY GLY GLU TYR TYR CYS PHE ALA SER SEQRES 23 B 493 ASP ILE THR CYS SER PHE PRO ALA ASN GLY LYS PHE THR SEQRES 24 B 493 ALA ASP GLN LYS ALA VAL TYR GLU ALA VAL LEU ARG SER SEQRES 25 B 493 SER ARG ALA VAL MET GLY ALA MET LYS PRO GLY VAL TRP SEQRES 26 B 493 TRP PRO ASP MET HIS ARG LEU ALA ASP ARG ILE HIS LEU SEQRES 27 B 493 GLU GLU LEU ALA HIS MET GLY ILE LEU SER GLY SER VAL SEQRES 28 B 493 ASP ALA MET VAL GLN ALA HIS LEU GLY ALA VAL PHE MET SEQRES 29 B 493 PRO HIS GLY LEU GLY HIS PHE LEU GLY ILE ASP VAL HIS SEQRES 30 B 493 ASP VAL GLY GLY TYR PRO GLU GLY VAL GLU ARG ILE ASP SEQRES 31 B 493 GLU PRO GLY LEU ARG SER LEU ARG THR ALA ARG HIS LEU SEQRES 32 B 493 GLN PRO GLY MET VAL LEU THR VAL GLU PRO GLY ILE TYR SEQRES 33 B 493 PHE ILE ASP HIS LEU LEU ASP GLU ALA LEU ALA ASP PRO SEQRES 34 B 493 ALA ARG ALA SER PHE LEU ASN ARG GLU VAL LEU GLN ARG SEQRES 35 B 493 PHE ARG GLY PHE GLY GLY VAL ARG ILE GLU GLU ASP VAL SEQRES 36 B 493 VAL VAL THR ASP SER GLY ILE GLU LEU LEU THR CYS VAL SEQRES 37 B 493 PRO HIS THR VAL GLU GLU ILE GLU ALA CYS MET ALA GLY SEQRES 38 B 493 CYS ASP LYS ALA PHE THR PRO PHE SER GLY PRO LYS HET MN A 499 1 HET MH2 A 500 2 HET GOL A 503 11 HET GOL A 504 11 HET GOL A 505 11 HET GLY A 506 9 HET PRO A 507 15 HET MN B 499 1 HET MH2 B 500 2 HET GOL B 503 11 HET GOL B 504 11 HET GOL B 505 11 HET GOL B 506 11 HET GOL B 507 11 HET GOL B 508 14 HET GLY B 509 9 HET PRO B 510 15 HETNAM MN MANGANESE (II) ION HETNAM MH2 MANGANESE ION, 1 HYDROXYL COORDINATED HETNAM GOL GLYCEROL HETNAM GLY GLYCINE HETNAM PRO PROLINE HETSYN MH2 [MN(OH)]+ HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MN 2(MN 2+) FORMUL 4 MH2 2(H MN O 2+) FORMUL 5 GOL 9(C3 H8 O3) FORMUL 8 GLY 2(C2 H5 N O2) FORMUL 9 PRO 2(C5 H9 N O2) FORMUL 20 HOH *1130(H2 O) HELIX 1 AA1 LEU A 20 ASN A 37 1 18 HELIX 2 AA2 GLU A 68 GLY A 76 1 9 HELIX 3 AA3 SER A 103 MET A 108 1 6 HELIX 4 AA4 SER A 113 ALA A 122 1 10 HELIX 5 AA5 GLU A 131 GLN A 139 1 9 HELIX 6 AA6 GLY A 165 PHE A 169 5 5 HELIX 7 AA7 ILE A 175 PHE A 186 1 12 HELIX 8 AA8 THR A 188 VAL A 213 1 26 HELIX 9 AA9 LYS A 218 GLY A 235 1 18 HELIX 10 AB1 GLU A 249 VAL A 253 5 5 HELIX 11 AB2 THR A 299 MET A 320 1 22 HELIX 12 AB3 TRP A 325 MET A 344 1 20 HELIX 13 AB4 SER A 350 ALA A 357 1 8 HELIX 14 AB5 LEU A 359 MET A 364 1 6 HELIX 15 AB6 GLY A 393 LEU A 397 5 5 HELIX 16 AB7 ILE A 418 ASP A 428 1 11 HELIX 17 AB8 ASP A 428 SER A 433 1 6 HELIX 18 AB9 ASN A 436 GLN A 441 1 6 HELIX 19 AC1 ARG A 442 ARG A 444 5 3 HELIX 20 AC2 THR A 471 ALA A 480 1 10 HELIX 21 AC3 LEU B 20 ASN B 37 1 18 HELIX 22 AC4 GLU B 68 GLY B 76 1 9 HELIX 23 AC5 SER B 103 MET B 108 1 6 HELIX 24 AC6 SER B 113 ALA B 122 1 10 HELIX 25 AC7 GLU B 131 LYS B 140 1 10 HELIX 26 AC8 GLY B 165 PHE B 169 5 5 HELIX 27 AC9 ILE B 175 PHE B 186 1 12 HELIX 28 AD1 THR B 188 VAL B 213 1 26 HELIX 29 AD2 LYS B 218 GLY B 235 1 18 HELIX 30 AD3 GLU B 249 VAL B 253 5 5 HELIX 31 AD4 THR B 299 MET B 320 1 22 HELIX 32 AD5 TRP B 325 MET B 344 1 20 HELIX 33 AD6 SER B 350 ALA B 357 1 8 HELIX 34 AD7 LEU B 359 MET B 364 1 6 HELIX 35 AD8 GLY B 393 LEU B 397 5 5 HELIX 36 AD9 ILE B 418 ASP B 428 1 11 HELIX 37 AE1 ASP B 428 SER B 433 1 6 HELIX 38 AE2 ASN B 436 GLN B 441 1 6 HELIX 39 AE3 ARG B 442 ARG B 444 5 3 HELIX 40 AE4 THR B 471 ALA B 480 1 10 SHEET 1 AA1 2 SER A 8 PHE A 9 0 SHEET 2 AA1 2 VAL A 18 PRO A 19 -1 O VAL A 18 N PHE A 9 SHEET 1 AA2 6 ASP A 125 TYR A 128 0 SHEET 2 AA2 6 SER A 93 VAL A 97 1 N LEU A 95 O ASP A 125 SHEET 3 AA2 6 TYR A 83 ASP A 87 -1 N TYR A 83 O PHE A 96 SHEET 4 AA2 6 ILE A 45 GLN A 49 -1 N VAL A 46 O ILE A 86 SHEET 5 AA2 6 LEU A 144 LEU A 145 1 O LEU A 145 N ILE A 45 SHEET 6 AA2 6 VAL A 171 ASN A 172 1 O ASN A 172 N LEU A 144 SHEET 1 AA3 2 THR A 54 GLN A 55 0 SHEET 2 AA3 2 GLY A 62 VAL A 63 -1 O VAL A 63 N THR A 54 SHEET 1 AA4 2 HIS A 238 SER A 239 0 SHEET 2 AA4 2 GLY A 279 GLU A 280 -1 O GLU A 280 N HIS A 238 SHEET 1 AA5 3 ILE A 244 SER A 247 0 SHEET 2 AA5 3 MET A 272 MET A 277 -1 O ASP A 276 N ILE A 244 SHEET 3 AA5 3 ILE A 288 PRO A 293 -1 O PHE A 292 N CYS A 273 SHEET 1 AA6 3 VAL A 408 VAL A 411 0 SHEET 2 AA6 3 GLU A 453 VAL A 457 -1 O VAL A 455 N LEU A 409 SHEET 3 AA6 3 ILE A 462 LEU A 464 -1 O GLU A 463 N VAL A 456 SHEET 1 AA7 2 GLY A 414 TYR A 416 0 SHEET 2 AA7 2 GLY A 448 ARG A 450 -1 O VAL A 449 N ILE A 415 SHEET 1 AA8 2 SER B 8 PHE B 9 0 SHEET 2 AA8 2 VAL B 18 PRO B 19 -1 O VAL B 18 N PHE B 9 SHEET 1 AA9 6 ASP B 125 TYR B 128 0 SHEET 2 AA9 6 SER B 93 VAL B 97 1 N LEU B 95 O ASP B 125 SHEET 3 AA9 6 TYR B 83 ASP B 87 -1 N TYR B 83 O PHE B 96 SHEET 4 AA9 6 ILE B 45 GLN B 49 -1 N VAL B 46 O ILE B 86 SHEET 5 AA9 6 LEU B 144 LEU B 145 1 O LEU B 145 N ILE B 45 SHEET 6 AA9 6 VAL B 171 ASN B 172 1 O ASN B 172 N LEU B 144 SHEET 1 AB1 2 THR B 54 GLN B 55 0 SHEET 2 AB1 2 GLY B 62 VAL B 63 -1 O VAL B 63 N THR B 54 SHEET 1 AB2 2 GLY B 149 VAL B 150 0 SHEET 2 AB2 2 VAL B 157 CYS B 158 -1 O CYS B 158 N GLY B 149 SHEET 1 AB3 2 HIS B 238 SER B 239 0 SHEET 2 AB3 2 GLY B 279 GLU B 280 -1 O GLU B 280 N HIS B 238 SHEET 1 AB4 3 ILE B 244 SER B 247 0 SHEET 2 AB4 3 MET B 272 MET B 277 -1 O ASP B 276 N ILE B 244 SHEET 3 AB4 3 ILE B 288 PRO B 293 -1 O PHE B 292 N CYS B 273 SHEET 1 AB5 3 VAL B 408 VAL B 411 0 SHEET 2 AB5 3 GLU B 453 VAL B 457 -1 O VAL B 455 N LEU B 409 SHEET 3 AB5 3 ILE B 462 LEU B 464 -1 O GLU B 463 N VAL B 456 SHEET 1 AB6 2 GLY B 414 TYR B 416 0 SHEET 2 AB6 2 GLY B 448 ARG B 450 -1 O VAL B 449 N ILE B 415 SSBOND 1 CYS A 58 CYS B 158 1555 1555 2.06 SSBOND 2 CYS A 482 CYS A 482 1555 3555 2.05 SSBOND 3 CYS B 482 CYS B 482 1555 3555 2.05 LINK OD1 ASP A 276 MN MH2 A 500 1555 1555 2.06 LINK OD2 ASP A 276 MN MH2 A 500 1555 1555 2.29 LINK OD2 ASP A 287 MN MN A 499 1555 1555 2.28 LINK OD1 ASP A 287 MN MH2 A 500 1555 1555 2.15 LINK NE2 HIS A 370 MN MN A 499 1555 1555 2.26 LINK OE2 GLU A 412 MN MN A 499 1555 1555 2.22 LINK OE2 GLU A 452 MN MN A 499 1555 1555 2.58 LINK MN MN A 499 O1 MH2 A 500 1555 1555 2.37 LINK MN MN A 499 O GLY A 506 1555 1555 2.63 LINK MN MH2 A 500 N GLY A 506 1555 1555 2.66 LINK OD1 ASP B 276 MN MH2 B 500 1555 1555 2.12 LINK OD2 ASP B 276 MN MH2 B 500 1555 1555 2.25 LINK OD2 ASP B 287 MN MN B 499 1555 1555 2.25 LINK OD1 ASP B 287 MN MH2 B 500 1555 1555 2.15 LINK NE2 HIS B 370 MN MN B 499 1555 1555 2.30 LINK OE2 GLU B 412 MN MN B 499 1555 1555 2.26 LINK OE2 GLU B 452 MN MN B 499 1555 1555 2.47 LINK OE1 GLU B 452 MN MH2 B 500 1555 1555 2.36 LINK MN MN B 499 O1 MH2 B 500 1555 1555 2.28 LINK MN MN B 499 O GLY B 509 1555 1555 2.60 SITE 1 AC1 6 ASP A 287 HIS A 370 GLU A 412 GLU A 452 SITE 2 AC1 6 MH2 A 500 GLY A 506 SITE 1 AC2 8 TYR A 241 ASP A 276 ASP A 287 GLU A 412 SITE 2 AC2 8 GLU A 452 MN A 499 GLY A 506 PRO A 507 SITE 1 AC3 6 THR A 152 ARG A 388 HOH A 626 HOH A 653 SITE 2 AC3 6 HOH A 736 HOH A 978 SITE 1 AC4 12 GLU A 227 ARG A 237 HIS A 238 SER A 239 SITE 2 AC4 12 HOH A 607 HOH A 614 HOH A 623 HOH A 659 SITE 3 AC4 12 HOH A 682 HOH A 761 HOH A 963 GLU B 227 SITE 1 AC5 9 PHE A 9 TRP A 10 LEU A 11 LYS A 120 SITE 2 AC5 9 HOH A 603 HOH A 609 HOH A 655 HOH A 894 SITE 3 AC5 9 ASP B 264 SITE 1 AC6 9 TYR A 241 ASP A 276 ASP A 287 HIS A 370 SITE 2 AC6 9 HIS A 377 MN A 499 MH2 A 500 PRO A 507 SITE 3 AC6 9 HOH A 845 SITE 1 AC7 12 LEU A 254 HIS A 255 ASP A 276 HIS A 366 SITE 2 AC7 12 HIS A 377 ARG A 398 GLU A 412 ARG A 450 SITE 3 AC7 12 MH2 A 500 GLY A 506 HOH A 750 HOH A 892 SITE 1 AC8 6 ASP B 287 HIS B 370 GLU B 412 GLU B 452 SITE 2 AC8 6 MH2 B 500 GLY B 509 SITE 1 AC9 8 ASP B 276 ASP B 287 THR B 289 GLU B 412 SITE 2 AC9 8 GLU B 452 MN B 499 GLY B 509 PRO B 510 SITE 1 AD1 3 GLU B 387 ARG B 388 HOH B 772 SITE 1 AD2 6 ARG A 314 ARG B 35 VAL B 40 ASP B 89 SITE 2 AD2 6 HOH B 626 HOH B 701 SITE 1 AD3 6 TYR B 83 VAL B 129 PHE B 163 ASP B 164 SITE 2 AD3 6 HOH B 742 HOH B 987 SITE 1 AD4 8 ALA A 105 GLU B 249 ALA B 252 ILE B 418 SITE 2 AD4 8 ASP B 419 HOH B 894 HOH B 959 HOH B 962 SITE 1 AD5 9 ASP A 264 PHE B 9 TRP B 10 LEU B 11 SITE 2 AD5 9 LYS B 120 HOH B 606 HOH B 609 HOH B 702 SITE 3 AD5 9 HOH B 735 SITE 1 AD6 6 GLU B 14 TYR B 197 LYS B 200 HOH B 619 SITE 2 AD6 6 HOH B 639 HOH B 785 SITE 1 AD7 9 TYR B 241 ASP B 276 ASP B 287 HIS B 370 SITE 2 AD7 9 HIS B 377 MN B 499 MH2 B 500 PRO B 510 SITE 3 AD7 9 HOH B 936 SITE 1 AD8 11 LEU B 254 HIS B 255 HIS B 366 HIS B 377 SITE 2 AD8 11 ARG B 398 GLU B 412 ARG B 450 MH2 B 500 SITE 3 AD8 11 GLY B 509 HOH B 783 HOH B 871 CRYST1 103.541 108.714 211.548 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009658 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004727 0.00000