HEADER STRUCTURAL PROTEIN 05-MAR-19 6QW3 TITLE CALCIUM-BOUND GELSOLIN DOMAIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELSOLIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AGEL,ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: GELSOLIN DOMAIN 2 (G2) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMYLOIDOSIS, GELSOLIN, ACTIN-BINDING, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.SCALONE,F.BONI,M.MILANI,E.MASTRANGELO,M.DE ROSA REVDAT 3 24-JAN-24 6QW3 1 LINK REVDAT 2 11-SEP-19 6QW3 1 JRNL REVDAT 1 28-AUG-19 6QW3 0 JRNL AUTH M.BOLLATI,E.SCALONE,F.BONI,E.MASTRANGELO,T.GIORGINO, JRNL AUTH 2 M.MILANI,M.DE ROSA JRNL TITL HIGH-RESOLUTION CRYSTAL STRUCTURE OF GELSOLIN DOMAIN 2 IN JRNL TITL 2 COMPLEX WITH THE PHYSIOLOGICAL CALCIUM ION. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 518 94 2019 JRNL REFN ESSN 1090-2104 JRNL PMID 31416615 JRNL DOI 10.1016/J.BBRC.2019.08.013 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 24046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.310 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0153 - 3.1331 1.00 1723 156 0.1391 0.1520 REMARK 3 2 3.1331 - 2.4870 1.00 1623 147 0.1559 0.1893 REMARK 3 3 2.4870 - 2.1726 1.00 1603 146 0.1468 0.1590 REMARK 3 4 2.1726 - 1.9740 1.00 1586 144 0.1433 0.1711 REMARK 3 5 1.9740 - 1.8325 1.00 1585 144 0.1586 0.1728 REMARK 3 6 1.8325 - 1.7244 1.00 1571 142 0.1536 0.1825 REMARK 3 7 1.7244 - 1.6381 1.00 1568 143 0.1540 0.1820 REMARK 3 8 1.6381 - 1.5668 1.00 1558 141 0.1608 0.1792 REMARK 3 9 1.5668 - 1.5065 1.00 1572 143 0.1606 0.2184 REMARK 3 10 1.5065 - 1.4545 1.00 1559 141 0.1710 0.1752 REMARK 3 11 1.4545 - 1.4090 1.00 1543 139 0.1923 0.2061 REMARK 3 12 1.4090 - 1.3687 1.00 1573 143 0.2039 0.2433 REMARK 3 13 1.3687 - 1.3327 0.99 1503 136 0.2243 0.2594 REMARK 3 14 1.3327 - 1.3002 0.94 1480 134 0.2402 0.2662 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 975 REMARK 3 ANGLE : 1.469 1337 REMARK 3 CHIRALITY : 0.108 142 REMARK 3 PLANARITY : 0.009 184 REMARK 3 DIHEDRAL : 29.627 404 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4678 15.9503 0.7136 REMARK 3 T TENSOR REMARK 3 T11: 0.1203 T22: 0.0969 REMARK 3 T33: 0.0985 T12: -0.0133 REMARK 3 T13: 0.0000 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 5.0489 L22: 4.9124 REMARK 3 L33: 5.2048 L12: -1.1561 REMARK 3 L13: -0.7295 L23: 0.8040 REMARK 3 S TENSOR REMARK 3 S11: 0.1818 S12: 0.2687 S13: 0.0120 REMARK 3 S21: -0.5127 S22: -0.1501 S23: -0.1170 REMARK 3 S31: -0.2102 S32: -0.1084 S33: -0.0714 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1823 14.4944 9.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.0998 T22: 0.1229 REMARK 3 T33: 0.1248 T12: 0.0004 REMARK 3 T13: 0.0001 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.3497 L22: 2.7919 REMARK 3 L33: 2.2714 L12: -0.2755 REMARK 3 L13: -0.3383 L23: 0.8435 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: -0.0235 S13: -0.0283 REMARK 3 S21: 0.1135 S22: -0.0278 S23: 0.0947 REMARK 3 S31: -0.0085 S32: -0.0472 S33: 0.0262 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3705 16.5733 4.1244 REMARK 3 T TENSOR REMARK 3 T11: 0.1081 T22: 0.1650 REMARK 3 T33: 0.1533 T12: -0.0050 REMARK 3 T13: 0.0053 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.8996 L22: 6.8313 REMARK 3 L33: 1.5590 L12: 0.5783 REMARK 3 L13: -0.2259 L23: 1.0138 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.0186 S13: -0.0899 REMARK 3 S21: -0.2300 S22: 0.0844 S23: -0.5525 REMARK 3 S31: -0.0542 S32: 0.1803 S33: -0.0668 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7186 32.6611 8.5774 REMARK 3 T TENSOR REMARK 3 T11: 0.3136 T22: 0.1795 REMARK 3 T33: 0.1532 T12: -0.0581 REMARK 3 T13: -0.0213 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.4050 L22: 3.5843 REMARK 3 L33: 2.0280 L12: 1.6831 REMARK 3 L13: 1.0184 L23: 1.3735 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: -0.1367 S13: 0.2430 REMARK 3 S21: 0.3891 S22: 0.0328 S23: -0.0786 REMARK 3 S31: -0.4846 S32: 0.1949 S33: 0.0240 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8393 18.9931 15.7504 REMARK 3 T TENSOR REMARK 3 T11: 0.0998 T22: 0.1663 REMARK 3 T33: 0.0786 T12: -0.0073 REMARK 3 T13: -0.0318 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 8.8129 L22: 5.5805 REMARK 3 L33: 7.7004 L12: 4.1649 REMARK 3 L13: -0.8379 L23: -2.8583 REMARK 3 S TENSOR REMARK 3 S11: 0.1451 S12: -0.4040 S13: -0.2111 REMARK 3 S21: 0.4328 S22: -0.1473 S23: -0.3668 REMARK 3 S31: -0.1889 S32: 0.4076 S33: 0.0095 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7249 11.6080 18.5960 REMARK 3 T TENSOR REMARK 3 T11: 0.3295 T22: 0.2232 REMARK 3 T33: 0.1788 T12: -0.0410 REMARK 3 T13: -0.0075 T23: 0.0304 REMARK 3 L TENSOR REMARK 3 L11: 5.1112 L22: 9.5409 REMARK 3 L33: 6.8897 L12: 0.4733 REMARK 3 L13: 1.3056 L23: 3.1220 REMARK 3 S TENSOR REMARK 3 S11: 0.2062 S12: -0.2530 S13: -0.3656 REMARK 3 S21: 0.2316 S22: -0.2313 S23: 0.0558 REMARK 3 S31: 1.0992 S32: -0.1257 S33: 0.0460 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5237 19.1776 18.5173 REMARK 3 T TENSOR REMARK 3 T11: 0.1761 T22: 0.1907 REMARK 3 T33: 0.1707 T12: 0.0075 REMARK 3 T13: 0.0359 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 8.5058 L22: 1.4241 REMARK 3 L33: 8.6335 L12: 0.1620 REMARK 3 L13: 6.2561 L23: -2.2526 REMARK 3 S TENSOR REMARK 3 S11: -0.0362 S12: -0.5525 S13: 0.0876 REMARK 3 S21: 0.3326 S22: -0.1170 S23: 0.2091 REMARK 3 S31: -0.4111 S32: -0.6752 S33: 0.1708 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8725 6.5485 11.3806 REMARK 3 T TENSOR REMARK 3 T11: 0.1588 T22: 0.1866 REMARK 3 T33: 0.2157 T12: -0.0105 REMARK 3 T13: 0.0397 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.0002 L22: 1.7384 REMARK 3 L33: 1.6144 L12: -1.2590 REMARK 3 L13: -1.1992 L23: 1.3858 REMARK 3 S TENSOR REMARK 3 S11: -0.1956 S12: 0.0391 S13: -0.2098 REMARK 3 S21: 0.2153 S22: -0.0495 S23: 0.3513 REMARK 3 S31: 0.2584 S32: -0.2084 S33: 0.2717 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5512 3.9839 -9.3797 REMARK 3 T TENSOR REMARK 3 T11: 0.2588 T22: 0.1739 REMARK 3 T33: 0.1297 T12: -0.0293 REMARK 3 T13: 0.0015 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.2322 L22: 0.6519 REMARK 3 L33: 2.1933 L12: -0.0911 REMARK 3 L13: -0.4690 L23: -1.1450 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: 0.2753 S13: 0.0652 REMARK 3 S21: -0.3440 S22: 0.0903 S23: 0.0040 REMARK 3 S31: -0.4622 S32: 0.0239 S33: -0.0543 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QW3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292100948. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24096 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 70.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.76400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1KCQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 36% PEG5000 MME, 0.1M SODIUM ACETATE, REMARK 280 PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.13750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.40950 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.13750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.40950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 434 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 514 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 148 REMARK 465 SER A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 VAL A 152 REMARK 465 VAL A 153 REMARK 465 PRO A 154 REMARK 465 ASN A 155 REMARK 465 GLU A 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 157 N CA CB CG1 CG2 REMARK 470 LYS A 262 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 168 O HOH A 401 2.02 REMARK 500 NH2 ARG A 168 O HOH A 402 2.06 REMARK 500 OE1 GLN A 245 O HOH A 403 2.08 REMARK 500 O HOH A 491 O HOH A 513 2.14 REMARK 500 OE1 GLN A 215 O HOH A 404 2.14 REMARK 500 O HOH A 412 O HOH A 439 2.16 REMARK 500 NH2 ARG A 230 O HOH A 405 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 243 CG - SD - CE ANGL. DEV. = 11.3 DEGREES REMARK 500 MET A 243 CG - SD - CE ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 168 -84.65 -124.22 REMARK 500 ARG A 168 -85.85 -123.25 REMARK 500 ARG A 228 52.34 -104.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 186 O REMARK 620 2 ASP A 187 OD1 77.5 REMARK 620 3 GLU A 209 OE1 76.6 100.7 REMARK 620 4 GLU A 209 OE2 120.5 84.0 52.1 REMARK 620 5 ASP A 259 OD1 142.6 138.6 99.7 80.9 REMARK 620 6 ASP A 259 OD2 155.6 88.0 126.0 76.6 51.0 REMARK 620 7 HOH A 457 O 82.2 85.3 156.0 151.8 90.3 77.0 REMARK 620 8 HOH A 473 O 74.0 150.9 78.3 115.6 68.9 116.4 85.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 DBREF 6QW3 A 151 266 UNP P06396 GELS_HUMAN 178 293 SEQADV 6QW3 GLY A 148 UNP P06396 EXPRESSION TAG SEQADV 6QW3 SER A 149 UNP P06396 EXPRESSION TAG SEQADV 6QW3 HIS A 150 UNP P06396 EXPRESSION TAG SEQRES 1 A 119 GLY SER HIS HIS VAL VAL PRO ASN GLU VAL VAL VAL GLN SEQRES 2 A 119 ARG LEU PHE GLN VAL LYS GLY ARG ARG VAL VAL ARG ALA SEQRES 3 A 119 THR GLU VAL PRO VAL SER TRP GLU SER PHE ASN ASN GLY SEQRES 4 A 119 ASP CYS PHE ILE LEU ASP LEU GLY ASN ASN ILE HIS GLN SEQRES 5 A 119 TRP CYS GLY SER ASN SER ASN ARG TYR GLU ARG LEU LYS SEQRES 6 A 119 ALA THR GLN VAL SER LYS GLY ILE ARG ASP ASN GLU ARG SEQRES 7 A 119 SER GLY ARG ALA ARG VAL HIS VAL SER GLU GLU GLY THR SEQRES 8 A 119 GLU PRO GLU ALA MET LEU GLN VAL LEU GLY PRO LYS PRO SEQRES 9 A 119 ALA LEU PRO ALA GLY THR GLU ASP THR ALA LYS GLU ASP SEQRES 10 A 119 ALA ALA HET CA A 301 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *150(H2 O) HELIX 1 AA1 SER A 179 PHE A 183 5 5 HELIX 2 AA2 ASN A 206 GLU A 224 1 19 HELIX 3 AA3 PRO A 240 GLY A 248 1 9 SHEET 1 AA1 5 ARG A 172 VAL A 176 0 SHEET 2 AA1 5 ARG A 161 LYS A 166 -1 N GLN A 164 O THR A 174 SHEET 3 AA1 5 CYS A 188 ASP A 192 -1 O CYS A 188 N VAL A 165 SHEET 4 AA1 5 ASN A 196 CYS A 201 -1 O TRP A 200 N PHE A 189 SHEET 5 AA1 5 ARG A 230 GLU A 235 1 O HIS A 232 N ILE A 197 SSBOND 1 CYS A 188 CYS A 201 1555 1555 2.09 LINK O GLY A 186 CA CA A 301 1555 1555 2.38 LINK OD1 ASP A 187 CA CA A 301 1555 1555 2.31 LINK OE1 GLU A 209 CA CA A 301 1555 1555 2.59 LINK OE2 GLU A 209 CA CA A 301 1555 1555 2.38 LINK OD1 ASP A 259 CA CA A 301 1555 1555 2.48 LINK OD2 ASP A 259 CA CA A 301 1555 1555 2.58 LINK CA CA A 301 O HOH A 457 1555 2555 2.45 LINK CA CA A 301 O HOH A 473 1555 1555 2.53 SITE 1 AC1 6 GLY A 186 ASP A 187 GLU A 209 ASP A 259 SITE 2 AC1 6 HOH A 457 HOH A 473 CRYST1 26.653 50.275 70.819 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.037519 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014121 0.00000