data_6QYP # _entry.id 6QYP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6QYP pdb_00006qyp 10.2210/pdb6qyp/pdb WWPDB D_1292101132 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-07 2 'Structure model' 1 1 2019-08-21 3 'Structure model' 1 2 2019-09-18 4 'Structure model' 1 3 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' software 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_software.version' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6QYP _pdbx_database_status.recvd_initial_deposition_date 2019-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6QXJ unspecified PDB . 6qyk unspecified PDB . 6qyl unspecified PDB . 6qyn unspecified PDB . 6qyo unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Dokurno, P.' 1 0000-0002-7332-8889 'Szlavik, Z.' 2 0000-0002-9385-806X 'Ondi, L.' 3 ? 'Csekei, M.' 4 0000-0002-5781-1096 'Paczal, A.' 5 ? 'Szabo, Z.B.' 6 0000-0001-7557-0305 'Radics, G.' 7 0000-0003-4954-3025 'Murray, J.' 8 0000-0003-1007-8218 'Davidson, J.' 9 0000-0002-8301-1607 'Chen, I.' 10 ? 'Davis, B.' 11 0000-0001-6759-7575 'Hubbard, R.E.' 12 0000-0002-8233-7461 'Pedder, C.' 13 ? 'Surgenor, A.E.' 14 ? 'Smith, J.' 15 ? 'Robertson, A.' 16 ? 'LeToumelin-Braizat, G.' 17 ? 'Cauquil, N.' 18 ? 'Zarka, M.' 19 ? 'Demarles, D.' 20 ? 'Perron-Sierra, F.' 21 ? 'Geneste, O.' 22 ? 'Kotschy, A.' 23 0000-0002-7675-3864 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 62 _citation.language ? _citation.page_first 6913 _citation.page_last 6924 _citation.title 'Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.9b00134 _citation.pdbx_database_id_PubMed 31339316 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Szlavik, Z.' 1 ? primary 'Ondi, L.' 2 ? primary 'Csekei, M.' 3 ? primary 'Paczal, A.' 4 ? primary 'Szabo, Z.B.' 5 ? primary 'Radics, G.' 6 ? primary 'Murray, J.' 7 ? primary 'Davidson, J.' 8 ? primary 'Chen, I.' 9 ? primary 'Davis, B.' 10 ? primary 'Hubbard, R.E.' 11 ? primary 'Pedder, C.' 12 ? primary 'Dokurno, P.' 13 ? primary 'Surgenor, A.' 14 ? primary 'Smith, J.' 15 ? primary 'Robertson, A.' 16 ? primary 'LeToumelin-Braizat, G.' 17 ? primary 'Cauquil, N.' 18 ? primary 'Zarka, M.' 19 ? primary 'Demarles, D.' 20 ? primary 'Perron-Sierra, F.' 21 ? primary 'Claperon, A.' 22 ? primary 'Colland, F.' 23 ? primary 'Geneste, O.' 24 ? primary 'Kotschy, A.' 25 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Induced myeloid leukemia cell differentiation protein Mcl-1' 19493.154 1 ? ? ? ? 2 non-polymer syn ;(2~{R})-2-[5-[3-chloranyl-2-methyl-5-(4-methylpiperazin-1-yl)-4-oxidanyl-phenyl]-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid ; 567.099 1 ? ? ? ? 3 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bcl-2-like protein 3,Bcl2-L-3,Bcl-2-related protein EAT/mcl1,mcl1/EAT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHLVPRGSEDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDI KNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVE FFHVEDLEGG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHLVPRGSEDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDI KNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVE FFHVEDLEGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2~{R})-2-[5-[3-chloranyl-2-methyl-5-(4-methylpiperazin-1-yl)-4-oxidanyl-phenyl]-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid ; JL5 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 LEU n 1 9 VAL n 1 10 PRO n 1 11 ARG n 1 12 GLY n 1 13 SER n 1 14 GLU n 1 15 ASP n 1 16 GLU n 1 17 LEU n 1 18 TYR n 1 19 ARG n 1 20 GLN n 1 21 SER n 1 22 LEU n 1 23 GLU n 1 24 ILE n 1 25 ILE n 1 26 SER n 1 27 ARG n 1 28 TYR n 1 29 LEU n 1 30 ARG n 1 31 GLU n 1 32 GLN n 1 33 ALA n 1 34 THR n 1 35 GLY n 1 36 ALA n 1 37 LYS n 1 38 ASP n 1 39 THR n 1 40 LYS n 1 41 PRO n 1 42 MET n 1 43 GLY n 1 44 ARG n 1 45 SER n 1 46 GLY n 1 47 ALA n 1 48 THR n 1 49 SER n 1 50 ARG n 1 51 LYS n 1 52 ALA n 1 53 LEU n 1 54 GLU n 1 55 THR n 1 56 LEU n 1 57 ARG n 1 58 ARG n 1 59 VAL n 1 60 GLY n 1 61 ASP n 1 62 GLY n 1 63 VAL n 1 64 GLN n 1 65 ARG n 1 66 ASN n 1 67 HIS n 1 68 GLU n 1 69 THR n 1 70 ALA n 1 71 PHE n 1 72 GLN n 1 73 GLY n 1 74 MET n 1 75 LEU n 1 76 ARG n 1 77 LYS n 1 78 LEU n 1 79 ASP n 1 80 ILE n 1 81 LYS n 1 82 ASN n 1 83 GLU n 1 84 ASP n 1 85 ASP n 1 86 VAL n 1 87 LYS n 1 88 SER n 1 89 LEU n 1 90 SER n 1 91 ARG n 1 92 VAL n 1 93 MET n 1 94 ILE n 1 95 HIS n 1 96 VAL n 1 97 PHE n 1 98 SER n 1 99 ASP n 1 100 GLY n 1 101 VAL n 1 102 THR n 1 103 ASN n 1 104 TRP n 1 105 GLY n 1 106 ARG n 1 107 ILE n 1 108 VAL n 1 109 THR n 1 110 LEU n 1 111 ILE n 1 112 SER n 1 113 PHE n 1 114 GLY n 1 115 ALA n 1 116 PHE n 1 117 VAL n 1 118 ALA n 1 119 LYS n 1 120 HIS n 1 121 LEU n 1 122 LYS n 1 123 THR n 1 124 ILE n 1 125 ASN n 1 126 GLN n 1 127 GLU n 1 128 SER n 1 129 CYS n 1 130 ILE n 1 131 GLU n 1 132 PRO n 1 133 LEU n 1 134 ALA n 1 135 GLU n 1 136 SER n 1 137 ILE n 1 138 THR n 1 139 ASP n 1 140 VAL n 1 141 LEU n 1 142 VAL n 1 143 ARG n 1 144 THR n 1 145 LYS n 1 146 ARG n 1 147 ASP n 1 148 TRP n 1 149 LEU n 1 150 VAL n 1 151 LYS n 1 152 GLN n 1 153 ARG n 1 154 GLY n 1 155 TRP n 1 156 ASP n 1 157 GLY n 1 158 PHE n 1 159 VAL n 1 160 GLU n 1 161 PHE n 1 162 PHE n 1 163 HIS n 1 164 VAL n 1 165 GLU n 1 166 ASP n 1 167 LEU n 1 168 GLU n 1 169 GLY n 1 170 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 170 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MCL1, BCL2L3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant pLysS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JL5 non-polymer . ;(2~{R})-2-[5-[3-chloranyl-2-methyl-5-(4-methylpiperazin-1-yl)-4-oxidanyl-phenyl]-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid ; ? 'C29 H31 Cl N4 O4 S' 567.099 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 158 ? ? ? A . n A 1 2 HIS 2 159 ? ? ? A . n A 1 3 HIS 3 160 ? ? ? A . n A 1 4 HIS 4 161 ? ? ? A . n A 1 5 HIS 5 162 ? ? ? A . n A 1 6 HIS 6 163 ? ? ? A . n A 1 7 HIS 7 164 ? ? ? A . n A 1 8 LEU 8 165 ? ? ? A . n A 1 9 VAL 9 166 ? ? ? A . n A 1 10 PRO 10 167 ? ? ? A . n A 1 11 ARG 11 168 ? ? ? A . n A 1 12 GLY 12 169 ? ? ? A . n A 1 13 SER 13 170 170 SER SER A . n A 1 14 GLU 14 171 171 GLU GLU A . n A 1 15 ASP 15 172 172 ASP ASP A . n A 1 16 GLU 16 173 173 GLU GLU A . n A 1 17 LEU 17 174 174 LEU LEU A . n A 1 18 TYR 18 175 175 TYR TYR A . n A 1 19 ARG 19 176 176 ARG ARG A . n A 1 20 GLN 20 177 177 GLN GLN A . n A 1 21 SER 21 178 178 SER SER A . n A 1 22 LEU 22 179 179 LEU LEU A . n A 1 23 GLU 23 180 180 GLU GLU A . n A 1 24 ILE 24 181 181 ILE ILE A . n A 1 25 ILE 25 182 182 ILE ILE A . n A 1 26 SER 26 183 183 SER SER A . n A 1 27 ARG 27 184 184 ARG ARG A . n A 1 28 TYR 28 185 185 TYR TYR A . n A 1 29 LEU 29 186 186 LEU LEU A . n A 1 30 ARG 30 187 187 ARG ARG A . n A 1 31 GLU 31 188 188 GLU GLU A . n A 1 32 GLN 32 189 189 GLN GLN A . n A 1 33 ALA 33 190 190 ALA ALA A . n A 1 34 THR 34 191 191 THR THR A . n A 1 35 GLY 35 192 192 GLY GLY A . n A 1 36 ALA 36 193 193 ALA ALA A . n A 1 37 LYS 37 194 194 LYS LYS A . n A 1 38 ASP 38 195 195 ASP ASP A . n A 1 39 THR 39 196 196 THR THR A . n A 1 40 LYS 40 197 197 LYS LYS A . n A 1 41 PRO 41 198 198 PRO PRO A . n A 1 42 MET 42 199 199 MET MET A . n A 1 43 GLY 43 200 200 GLY GLY A . n A 1 44 ARG 44 201 201 ARG ARG A . n A 1 45 SER 45 202 202 SER SER A . n A 1 46 GLY 46 203 203 GLY GLY A . n A 1 47 ALA 47 204 204 ALA ALA A . n A 1 48 THR 48 205 205 THR THR A . n A 1 49 SER 49 206 206 SER SER A . n A 1 50 ARG 50 207 207 ARG ARG A . n A 1 51 LYS 51 208 208 LYS LYS A . n A 1 52 ALA 52 209 209 ALA ALA A . n A 1 53 LEU 53 210 210 LEU LEU A . n A 1 54 GLU 54 211 211 GLU GLU A . n A 1 55 THR 55 212 212 THR THR A . n A 1 56 LEU 56 213 213 LEU LEU A . n A 1 57 ARG 57 214 214 ARG ARG A . n A 1 58 ARG 58 215 215 ARG ARG A . n A 1 59 VAL 59 216 216 VAL VAL A . n A 1 60 GLY 60 217 217 GLY GLY A . n A 1 61 ASP 61 218 218 ASP ASP A . n A 1 62 GLY 62 219 219 GLY GLY A . n A 1 63 VAL 63 220 220 VAL VAL A . n A 1 64 GLN 64 221 221 GLN GLN A . n A 1 65 ARG 65 222 222 ARG ARG A . n A 1 66 ASN 66 223 223 ASN ASN A . n A 1 67 HIS 67 224 224 HIS HIS A . n A 1 68 GLU 68 225 225 GLU GLU A . n A 1 69 THR 69 226 226 THR THR A . n A 1 70 ALA 70 227 227 ALA ALA A . n A 1 71 PHE 71 228 228 PHE PHE A . n A 1 72 GLN 72 229 229 GLN GLN A . n A 1 73 GLY 73 230 230 GLY GLY A . n A 1 74 MET 74 231 231 MET MET A . n A 1 75 LEU 75 232 232 LEU LEU A . n A 1 76 ARG 76 233 233 ARG ARG A . n A 1 77 LYS 77 234 234 LYS LYS A . n A 1 78 LEU 78 235 235 LEU LEU A . n A 1 79 ASP 79 236 236 ASP ASP A . n A 1 80 ILE 80 237 237 ILE ILE A . n A 1 81 LYS 81 238 238 LYS LYS A . n A 1 82 ASN 82 239 239 ASN ASN A . n A 1 83 GLU 83 240 240 GLU GLU A . n A 1 84 ASP 84 241 241 ASP ASP A . n A 1 85 ASP 85 242 242 ASP ASP A . n A 1 86 VAL 86 243 243 VAL VAL A . n A 1 87 LYS 87 244 244 LYS LYS A . n A 1 88 SER 88 245 245 SER SER A . n A 1 89 LEU 89 246 246 LEU LEU A . n A 1 90 SER 90 247 247 SER SER A . n A 1 91 ARG 91 248 248 ARG ARG A . n A 1 92 VAL 92 249 249 VAL VAL A . n A 1 93 MET 93 250 250 MET MET A . n A 1 94 ILE 94 251 251 ILE ILE A . n A 1 95 HIS 95 252 252 HIS HIS A . n A 1 96 VAL 96 253 253 VAL VAL A . n A 1 97 PHE 97 254 254 PHE PHE A . n A 1 98 SER 98 255 255 SER SER A . n A 1 99 ASP 99 256 256 ASP ASP A . n A 1 100 GLY 100 257 257 GLY GLY A . n A 1 101 VAL 101 258 258 VAL VAL A . n A 1 102 THR 102 259 259 THR THR A . n A 1 103 ASN 103 260 260 ASN ASN A . n A 1 104 TRP 104 261 261 TRP TRP A . n A 1 105 GLY 105 262 262 GLY GLY A . n A 1 106 ARG 106 263 263 ARG ARG A . n A 1 107 ILE 107 264 264 ILE ILE A . n A 1 108 VAL 108 265 265 VAL VAL A . n A 1 109 THR 109 266 266 THR THR A . n A 1 110 LEU 110 267 267 LEU LEU A . n A 1 111 ILE 111 268 268 ILE ILE A . n A 1 112 SER 112 269 269 SER SER A . n A 1 113 PHE 113 270 270 PHE PHE A . n A 1 114 GLY 114 271 271 GLY GLY A . n A 1 115 ALA 115 272 272 ALA ALA A . n A 1 116 PHE 116 273 273 PHE PHE A . n A 1 117 VAL 117 274 274 VAL VAL A . n A 1 118 ALA 118 275 275 ALA ALA A . n A 1 119 LYS 119 276 276 LYS LYS A . n A 1 120 HIS 120 277 277 HIS HIS A . n A 1 121 LEU 121 278 278 LEU LEU A . n A 1 122 LYS 122 279 279 LYS LYS A . n A 1 123 THR 123 280 280 THR THR A . n A 1 124 ILE 124 281 281 ILE ILE A . n A 1 125 ASN 125 282 282 ASN ASN A . n A 1 126 GLN 126 283 283 GLN GLN A . n A 1 127 GLU 127 284 284 GLU GLU A . n A 1 128 SER 128 285 285 SER SER A . n A 1 129 CYS 129 286 286 CYS CYS A . n A 1 130 ILE 130 287 287 ILE ILE A . n A 1 131 GLU 131 288 288 GLU GLU A . n A 1 132 PRO 132 289 289 PRO PRO A . n A 1 133 LEU 133 290 290 LEU LEU A . n A 1 134 ALA 134 291 291 ALA ALA A . n A 1 135 GLU 135 292 292 GLU GLU A . n A 1 136 SER 136 293 293 SER SER A . n A 1 137 ILE 137 294 294 ILE ILE A . n A 1 138 THR 138 295 295 THR THR A . n A 1 139 ASP 139 296 296 ASP ASP A . n A 1 140 VAL 140 297 297 VAL VAL A . n A 1 141 LEU 141 298 298 LEU LEU A . n A 1 142 VAL 142 299 299 VAL VAL A . n A 1 143 ARG 143 300 300 ARG ARG A . n A 1 144 THR 144 301 301 THR THR A . n A 1 145 LYS 145 302 302 LYS LYS A . n A 1 146 ARG 146 303 303 ARG ARG A . n A 1 147 ASP 147 304 304 ASP ASP A . n A 1 148 TRP 148 305 305 TRP TRP A . n A 1 149 LEU 149 306 306 LEU LEU A . n A 1 150 VAL 150 307 307 VAL VAL A . n A 1 151 LYS 151 308 308 LYS LYS A . n A 1 152 GLN 152 309 309 GLN GLN A . n A 1 153 ARG 153 310 310 ARG ARG A . n A 1 154 GLY 154 311 311 GLY GLY A . n A 1 155 TRP 155 312 312 TRP TRP A . n A 1 156 ASP 156 313 313 ASP ASP A . n A 1 157 GLY 157 314 314 GLY GLY A . n A 1 158 PHE 158 315 315 PHE PHE A . n A 1 159 VAL 159 316 316 VAL VAL A . n A 1 160 GLU 160 317 317 GLU GLU A . n A 1 161 PHE 161 318 318 PHE PHE A . n A 1 162 PHE 162 319 319 PHE PHE A . n A 1 163 HIS 163 320 320 HIS HIS A . n A 1 164 VAL 164 321 ? ? ? A . n A 1 165 GLU 165 322 ? ? ? A . n A 1 166 ASP 166 323 ? ? ? A . n A 1 167 LEU 167 324 ? ? ? A . n A 1 168 GLU 168 325 ? ? ? A . n A 1 169 GLY 169 326 ? ? ? A . n A 1 170 GLY 170 327 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JL5 1 401 401 JL5 8DP A . C 3 HOH 1 501 3 HOH HOH A . C 3 HOH 2 502 31 HOH HOH A . C 3 HOH 3 503 7 HOH HOH A . C 3 HOH 4 504 13 HOH HOH A . C 3 HOH 5 505 4 HOH HOH A . C 3 HOH 6 506 30 HOH HOH A . C 3 HOH 7 507 36 HOH HOH A . C 3 HOH 8 508 22 HOH HOH A . C 3 HOH 9 509 14 HOH HOH A . C 3 HOH 10 510 34 HOH HOH A . C 3 HOH 11 511 2 HOH HOH A . C 3 HOH 12 512 6 HOH HOH A . C 3 HOH 13 513 1 HOH HOH A . C 3 HOH 14 514 9 HOH HOH A . C 3 HOH 15 515 25 HOH HOH A . C 3 HOH 16 516 11 HOH HOH A . C 3 HOH 17 517 10 HOH HOH A . C 3 HOH 18 518 12 HOH HOH A . C 3 HOH 19 519 33 HOH HOH A . C 3 HOH 20 520 19 HOH HOH A . C 3 HOH 21 521 8 HOH HOH A . C 3 HOH 22 522 27 HOH HOH A . C 3 HOH 23 523 35 HOH HOH A . C 3 HOH 24 524 21 HOH HOH A . C 3 HOH 25 525 32 HOH HOH A . C 3 HOH 26 526 29 HOH HOH A . C 3 HOH 27 527 5 HOH HOH A . C 3 HOH 28 528 28 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 197 ? CG ? A LYS 40 CG 2 1 Y 1 A LYS 197 ? CD ? A LYS 40 CD 3 1 Y 1 A LYS 197 ? CE ? A LYS 40 CE 4 1 Y 1 A LYS 197 ? NZ ? A LYS 40 NZ 5 1 Y 1 A ARG 201 ? CG ? A ARG 44 CG 6 1 Y 1 A ARG 201 ? CD ? A ARG 44 CD 7 1 Y 1 A ARG 201 ? NE ? A ARG 44 NE 8 1 Y 1 A ARG 201 ? CZ ? A ARG 44 CZ 9 1 Y 1 A ARG 201 ? NH1 ? A ARG 44 NH1 10 1 Y 1 A ARG 201 ? NH2 ? A ARG 44 NH2 11 1 Y 1 A LYS 244 ? CG ? A LYS 87 CG 12 1 Y 1 A LYS 244 ? CD ? A LYS 87 CD 13 1 Y 1 A LYS 244 ? CE ? A LYS 87 CE 14 1 Y 1 A LYS 244 ? NZ ? A LYS 87 NZ 15 1 Y 1 A ARG 248 ? CG ? A ARG 91 CG 16 1 Y 1 A ARG 248 ? CD ? A ARG 91 CD 17 1 Y 1 A ARG 248 ? NE ? A ARG 91 NE 18 1 Y 1 A ARG 248 ? CZ ? A ARG 91 CZ 19 1 Y 1 A ARG 248 ? NH1 ? A ARG 91 NH1 20 1 Y 1 A ARG 248 ? NH2 ? A ARG 91 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6QYP _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.165 _cell.length_a_esd ? _cell.length_b 40.165 _cell.length_b_esd ? _cell.length_c 327.800 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QYP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05M BIS-TRIS pH 6.5; 30% Pentaerythritol ethoxylate (15/4 EO/OH), 0.05M Ammonium Sulphate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-01-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Mirrors _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6QYP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 29.3 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10131 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.2 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.15 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 85.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.43 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.6400 _refine.aniso_B[1][2] 0.8200 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 1.6400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -5.3200 _refine.B_iso_max 131.690 _refine.B_iso_mean 59.8470 _refine.B_iso_min 40.150 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9490 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6QYP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2000 _refine.ls_d_res_low 20.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8454 _refine.ls_number_reflns_R_free 482 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_percent_reflns_R_free 5.4000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2006 _refine.ls_R_factor_R_free 0.2533 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1976 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6qfq _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2700 _refine.pdbx_overall_ESU_R_Free 0.2200 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.6470 _refine.overall_SU_ML 0.1810 _refine.overall_SU_R_Cruickshank_DPI 0.2734 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.2000 _refine_hist.d_res_low 20.0000 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 1264 _refine_hist.pdbx_number_residues_total 151 _refine_hist.pdbx_B_iso_mean_ligand 56.18 _refine_hist.pdbx_B_iso_mean_solvent 64.83 _refine_hist.pdbx_number_atoms_protein 1197 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.013 1260 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.018 1166 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.500 1.681 1703 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.356 1.603 2648 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.019 5.000 150 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.029 20.986 71 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 18.069 15.000 219 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.212 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.074 0.200 159 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1413 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 277 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.2000 _refine_ls_shell.d_res_low 2.3170 _refine_ls_shell.number_reflns_all 1229 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_R_work 1171 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3030 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3120 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6QYP _struct.title 'Structure of Mcl-1 in complex with compound 13' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QYP _struct_keywords.text 'Apoptosis-inhibitor complex, Mcl1, Small molecule inhibitor, APOPTOSIS' _struct_keywords.pdbx_keywords APOPTOSIS # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MCL1_HUMAN _struct_ref.pdbx_db_accession Q07820 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG ; _struct_ref.pdbx_align_begin 171 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6QYP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 14 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q07820 _struct_ref_seq.db_align_beg 171 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 327 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 171 _struct_ref_seq.pdbx_auth_seq_align_end 327 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6QYP MET A 1 ? UNP Q07820 ? ? 'initiating methionine' 158 1 1 6QYP HIS A 2 ? UNP Q07820 ? ? 'expression tag' 159 2 1 6QYP HIS A 3 ? UNP Q07820 ? ? 'expression tag' 160 3 1 6QYP HIS A 4 ? UNP Q07820 ? ? 'expression tag' 161 4 1 6QYP HIS A 5 ? UNP Q07820 ? ? 'expression tag' 162 5 1 6QYP HIS A 6 ? UNP Q07820 ? ? 'expression tag' 163 6 1 6QYP HIS A 7 ? UNP Q07820 ? ? 'expression tag' 164 7 1 6QYP LEU A 8 ? UNP Q07820 ? ? 'expression tag' 165 8 1 6QYP VAL A 9 ? UNP Q07820 ? ? 'expression tag' 166 9 1 6QYP PRO A 10 ? UNP Q07820 ? ? 'expression tag' 167 10 1 6QYP ARG A 11 ? UNP Q07820 ? ? 'expression tag' 168 11 1 6QYP GLY A 12 ? UNP Q07820 ? ? 'expression tag' 169 12 1 6QYP SER A 13 ? UNP Q07820 ? ? 'expression tag' 170 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 7970 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 15 ? GLY A 35 ? ASP A 172 GLY A 192 1 ? 21 HELX_P HELX_P2 AA2 SER A 45 ? HIS A 67 ? SER A 202 HIS A 224 1 ? 23 HELX_P HELX_P3 AA3 HIS A 67 ? ASP A 79 ? HIS A 224 ASP A 236 1 ? 13 HELX_P HELX_P4 AA4 ASN A 82 ? SER A 98 ? ASN A 239 SER A 255 1 ? 17 HELX_P HELX_P5 AA5 ASN A 103 ? ILE A 124 ? ASN A 260 ILE A 281 1 ? 22 HELX_P HELX_P6 AA6 GLN A 126 ? SER A 128 ? GLN A 283 SER A 285 5 ? 3 HELX_P HELX_P7 AA7 CYS A 129 ? GLN A 152 ? CYS A 286 GLN A 309 1 ? 24 HELX_P HELX_P8 AA8 ARG A 153 ? HIS A 163 ? ARG A 310 HIS A 320 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id JL5 _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'binding site for residue JL5 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 HIS A 67 ? HIS A 224 . ? 8_555 ? 2 AC1 8 ALA A 70 ? ALA A 227 . ? 1_555 ? 3 AC1 8 PHE A 71 ? PHE A 228 . ? 1_555 ? 4 AC1 8 MET A 74 ? MET A 231 . ? 1_555 ? 5 AC1 8 ARG A 106 ? ARG A 263 . ? 1_555 ? 6 AC1 8 THR A 109 ? THR A 266 . ? 1_555 ? 7 AC1 8 LEU A 110 ? LEU A 267 . ? 1_555 ? 8 AC1 8 HOH C . ? HOH A 509 . ? 1_555 ? # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 526 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 158 ? A MET 1 2 1 Y 1 A HIS 159 ? A HIS 2 3 1 Y 1 A HIS 160 ? A HIS 3 4 1 Y 1 A HIS 161 ? A HIS 4 5 1 Y 1 A HIS 162 ? A HIS 5 6 1 Y 1 A HIS 163 ? A HIS 6 7 1 Y 1 A HIS 164 ? A HIS 7 8 1 Y 1 A LEU 165 ? A LEU 8 9 1 Y 1 A VAL 166 ? A VAL 9 10 1 Y 1 A PRO 167 ? A PRO 10 11 1 Y 1 A ARG 168 ? A ARG 11 12 1 Y 1 A GLY 169 ? A GLY 12 13 1 Y 1 A VAL 321 ? A VAL 164 14 1 Y 1 A GLU 322 ? A GLU 165 15 1 Y 1 A ASP 323 ? A ASP 166 16 1 Y 1 A LEU 324 ? A LEU 167 17 1 Y 1 A GLU 325 ? A GLU 168 18 1 Y 1 A GLY 326 ? A GLY 169 19 1 Y 1 A GLY 327 ? A GLY 170 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 JL5 C4 C Y N 183 JL5 C8 C Y N 184 JL5 N3 N Y N 185 JL5 C2 C Y N 186 JL5 N1 N Y N 187 JL5 C6 C Y N 188 JL5 C12 C N R 189 JL5 C13 C N N 190 JL5 C14 C N N 191 JL5 C7 C Y N 192 JL5 C9 C Y N 193 JL5 C10 C N N 194 JL5 C34 C N N 195 JL5 C35 C N N 196 JL5 N36 N N N 197 JL5 C39 C N N 198 JL5 C37 C N N 199 JL5 C38 C N N 200 JL5 N32 N N N 201 JL5 C26 C Y N 202 JL5 C28 C Y N 203 JL5 C25 C Y N 204 JL5 O30 O N N 205 JL5 C27 C Y N 206 JL5 CL CL N N 207 JL5 C24 C Y N 208 JL5 C29 C N N 209 JL5 C23 C Y N 210 JL5 C22 C N N 211 JL5 S5 S Y N 212 JL5 O11 O N N 213 JL5 O16 O N N 214 JL5 O15 O N N 215 JL5 C17 C Y N 216 JL5 C18 C Y N 217 JL5 C21 C Y N 218 JL5 C19 C Y N 219 JL5 C20 C Y N 220 JL5 C33 C Y N 221 JL5 H1 H N N 222 JL5 H2 H N N 223 JL5 H3 H N N 224 JL5 H4 H N N 225 JL5 H5 H N N 226 JL5 H6 H N N 227 JL5 H7 H N N 228 JL5 H8 H N N 229 JL5 H9 H N N 230 JL5 H10 H N N 231 JL5 H12 H N N 232 JL5 H13 H N N 233 JL5 H14 H N N 234 JL5 H15 H N N 235 JL5 H16 H N N 236 JL5 H17 H N N 237 JL5 H18 H N N 238 JL5 H19 H N N 239 JL5 H20 H N N 240 JL5 H21 H N N 241 JL5 H22 H N N 242 JL5 H23 H N N 243 JL5 H24 H N N 244 JL5 H25 H N N 245 JL5 H26 H N N 246 JL5 H27 H N N 247 JL5 H28 H N N 248 JL5 H29 H N N 249 JL5 H30 H N N 250 JL5 H31 H N N 251 JL5 H32 H N N 252 LEU N N N N 253 LEU CA C N S 254 LEU C C N N 255 LEU O O N N 256 LEU CB C N N 257 LEU CG C N N 258 LEU CD1 C N N 259 LEU CD2 C N N 260 LEU OXT O N N 261 LEU H H N N 262 LEU H2 H N N 263 LEU HA H N N 264 LEU HB2 H N N 265 LEU HB3 H N N 266 LEU HG H N N 267 LEU HD11 H N N 268 LEU HD12 H N N 269 LEU HD13 H N N 270 LEU HD21 H N N 271 LEU HD22 H N N 272 LEU HD23 H N N 273 LEU HXT H N N 274 LYS N N N N 275 LYS CA C N S 276 LYS C C N N 277 LYS O O N N 278 LYS CB C N N 279 LYS CG C N N 280 LYS CD C N N 281 LYS CE C N N 282 LYS NZ N N N 283 LYS OXT O N N 284 LYS H H N N 285 LYS H2 H N N 286 LYS HA H N N 287 LYS HB2 H N N 288 LYS HB3 H N N 289 LYS HG2 H N N 290 LYS HG3 H N N 291 LYS HD2 H N N 292 LYS HD3 H N N 293 LYS HE2 H N N 294 LYS HE3 H N N 295 LYS HZ1 H N N 296 LYS HZ2 H N N 297 LYS HZ3 H N N 298 LYS HXT H N N 299 MET N N N N 300 MET CA C N S 301 MET C C N N 302 MET O O N N 303 MET CB C N N 304 MET CG C N N 305 MET SD S N N 306 MET CE C N N 307 MET OXT O N N 308 MET H H N N 309 MET H2 H N N 310 MET HA H N N 311 MET HB2 H N N 312 MET HB3 H N N 313 MET HG2 H N N 314 MET HG3 H N N 315 MET HE1 H N N 316 MET HE2 H N N 317 MET HE3 H N N 318 MET HXT H N N 319 PHE N N N N 320 PHE CA C N S 321 PHE C C N N 322 PHE O O N N 323 PHE CB C N N 324 PHE CG C Y N 325 PHE CD1 C Y N 326 PHE CD2 C Y N 327 PHE CE1 C Y N 328 PHE CE2 C Y N 329 PHE CZ C Y N 330 PHE OXT O N N 331 PHE H H N N 332 PHE H2 H N N 333 PHE HA H N N 334 PHE HB2 H N N 335 PHE HB3 H N N 336 PHE HD1 H N N 337 PHE HD2 H N N 338 PHE HE1 H N N 339 PHE HE2 H N N 340 PHE HZ H N N 341 PHE HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 THR N N N N 374 THR CA C N S 375 THR C C N N 376 THR O O N N 377 THR CB C N R 378 THR OG1 O N N 379 THR CG2 C N N 380 THR OXT O N N 381 THR H H N N 382 THR H2 H N N 383 THR HA H N N 384 THR HB H N N 385 THR HG1 H N N 386 THR HG21 H N N 387 THR HG22 H N N 388 THR HG23 H N N 389 THR HXT H N N 390 TRP N N N N 391 TRP CA C N S 392 TRP C C N N 393 TRP O O N N 394 TRP CB C N N 395 TRP CG C Y N 396 TRP CD1 C Y N 397 TRP CD2 C Y N 398 TRP NE1 N Y N 399 TRP CE2 C Y N 400 TRP CE3 C Y N 401 TRP CZ2 C Y N 402 TRP CZ3 C Y N 403 TRP CH2 C Y N 404 TRP OXT O N N 405 TRP H H N N 406 TRP H2 H N N 407 TRP HA H N N 408 TRP HB2 H N N 409 TRP HB3 H N N 410 TRP HD1 H N N 411 TRP HE1 H N N 412 TRP HE3 H N N 413 TRP HZ2 H N N 414 TRP HZ3 H N N 415 TRP HH2 H N N 416 TRP HXT H N N 417 TYR N N N N 418 TYR CA C N S 419 TYR C C N N 420 TYR O O N N 421 TYR CB C N N 422 TYR CG C Y N 423 TYR CD1 C Y N 424 TYR CD2 C Y N 425 TYR CE1 C Y N 426 TYR CE2 C Y N 427 TYR CZ C Y N 428 TYR OH O N N 429 TYR OXT O N N 430 TYR H H N N 431 TYR H2 H N N 432 TYR HA H N N 433 TYR HB2 H N N 434 TYR HB3 H N N 435 TYR HD1 H N N 436 TYR HD2 H N N 437 TYR HE1 H N N 438 TYR HE2 H N N 439 TYR HH H N N 440 TYR HXT H N N 441 VAL N N N N 442 VAL CA C N S 443 VAL C C N N 444 VAL O O N N 445 VAL CB C N N 446 VAL CG1 C N N 447 VAL CG2 C N N 448 VAL OXT O N N 449 VAL H H N N 450 VAL H2 H N N 451 VAL HA H N N 452 VAL HB H N N 453 VAL HG11 H N N 454 VAL HG12 H N N 455 VAL HG13 H N N 456 VAL HG21 H N N 457 VAL HG22 H N N 458 VAL HG23 H N N 459 VAL HXT H N N 460 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 JL5 N3 C2 doub Y N 173 JL5 N3 C9 sing Y N 174 JL5 S5 C9 sing Y N 175 JL5 S5 C6 sing Y N 176 JL5 C22 C10 sing N N 177 JL5 C2 N1 sing Y N 178 JL5 C9 C8 doub Y N 179 JL5 C6 C10 sing N N 180 JL5 C6 C7 doub Y N 181 JL5 N1 C4 doub Y N 182 JL5 C8 C7 sing Y N 183 JL5 C8 C4 sing Y N 184 JL5 C7 C23 sing N N 185 JL5 C4 O11 sing N N 186 JL5 O16 C14 doub N N 187 JL5 C14 O15 sing N N 188 JL5 C14 C12 sing N N 189 JL5 C23 C28 doub Y N 190 JL5 C23 C24 sing Y N 191 JL5 O11 C12 sing N N 192 JL5 C28 C26 sing Y N 193 JL5 C12 C13 sing N N 194 JL5 C34 C35 sing N N 195 JL5 C34 N32 sing N N 196 JL5 C29 C24 sing N N 197 JL5 C35 N36 sing N N 198 JL5 C24 C27 doub Y N 199 JL5 N36 C39 sing N N 200 JL5 N36 C37 sing N N 201 JL5 C26 N32 sing N N 202 JL5 C26 C25 doub Y N 203 JL5 N32 C38 sing N N 204 JL5 C13 C17 sing N N 205 JL5 C27 C25 sing Y N 206 JL5 C27 CL sing N N 207 JL5 C25 O30 sing N N 208 JL5 C38 C37 sing N N 209 JL5 C17 C33 doub Y N 210 JL5 C17 C18 sing Y N 211 JL5 C33 C20 sing Y N 212 JL5 C18 C21 doub Y N 213 JL5 C20 C19 doub Y N 214 JL5 C21 C19 sing Y N 215 JL5 C2 H1 sing N N 216 JL5 C12 H2 sing N N 217 JL5 C13 H3 sing N N 218 JL5 C13 H4 sing N N 219 JL5 C10 H5 sing N N 220 JL5 C10 H6 sing N N 221 JL5 C34 H7 sing N N 222 JL5 C34 H8 sing N N 223 JL5 C35 H9 sing N N 224 JL5 C35 H10 sing N N 225 JL5 C39 H12 sing N N 226 JL5 C39 H13 sing N N 227 JL5 C39 H14 sing N N 228 JL5 C37 H15 sing N N 229 JL5 C37 H16 sing N N 230 JL5 C38 H17 sing N N 231 JL5 C38 H18 sing N N 232 JL5 C28 H19 sing N N 233 JL5 O30 H20 sing N N 234 JL5 C29 H21 sing N N 235 JL5 C29 H22 sing N N 236 JL5 C29 H23 sing N N 237 JL5 C22 H24 sing N N 238 JL5 C22 H25 sing N N 239 JL5 C22 H26 sing N N 240 JL5 O15 H27 sing N N 241 JL5 C18 H28 sing N N 242 JL5 C21 H29 sing N N 243 JL5 C19 H30 sing N N 244 JL5 C20 H31 sing N N 245 JL5 C33 H32 sing N N 246 LEU N CA sing N N 247 LEU N H sing N N 248 LEU N H2 sing N N 249 LEU CA C sing N N 250 LEU CA CB sing N N 251 LEU CA HA sing N N 252 LEU C O doub N N 253 LEU C OXT sing N N 254 LEU CB CG sing N N 255 LEU CB HB2 sing N N 256 LEU CB HB3 sing N N 257 LEU CG CD1 sing N N 258 LEU CG CD2 sing N N 259 LEU CG HG sing N N 260 LEU CD1 HD11 sing N N 261 LEU CD1 HD12 sing N N 262 LEU CD1 HD13 sing N N 263 LEU CD2 HD21 sing N N 264 LEU CD2 HD22 sing N N 265 LEU CD2 HD23 sing N N 266 LEU OXT HXT sing N N 267 LYS N CA sing N N 268 LYS N H sing N N 269 LYS N H2 sing N N 270 LYS CA C sing N N 271 LYS CA CB sing N N 272 LYS CA HA sing N N 273 LYS C O doub N N 274 LYS C OXT sing N N 275 LYS CB CG sing N N 276 LYS CB HB2 sing N N 277 LYS CB HB3 sing N N 278 LYS CG CD sing N N 279 LYS CG HG2 sing N N 280 LYS CG HG3 sing N N 281 LYS CD CE sing N N 282 LYS CD HD2 sing N N 283 LYS CD HD3 sing N N 284 LYS CE NZ sing N N 285 LYS CE HE2 sing N N 286 LYS CE HE3 sing N N 287 LYS NZ HZ1 sing N N 288 LYS NZ HZ2 sing N N 289 LYS NZ HZ3 sing N N 290 LYS OXT HXT sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PRO N CA sing N N 334 PRO N CD sing N N 335 PRO N H sing N N 336 PRO CA C sing N N 337 PRO CA CB sing N N 338 PRO CA HA sing N N 339 PRO C O doub N N 340 PRO C OXT sing N N 341 PRO CB CG sing N N 342 PRO CB HB2 sing N N 343 PRO CB HB3 sing N N 344 PRO CG CD sing N N 345 PRO CG HG2 sing N N 346 PRO CG HG3 sing N N 347 PRO CD HD2 sing N N 348 PRO CD HD3 sing N N 349 PRO OXT HXT sing N N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id JL5 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id JL5 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6QFQ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6QYP _atom_sites.fract_transf_matrix[1][1] 0.024897 _atom_sites.fract_transf_matrix[1][2] 0.014374 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028749 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003051 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_