data_6QYV # _entry.id 6QYV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6QYV pdb_00006qyv 10.2210/pdb6qyv/pdb WWPDB D_1292101155 ? ? BMRB 34373 ? 10.13018/BMR34373 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-11 2 'Structure model' 1 1 2019-10-02 3 'Structure model' 1 2 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_entry_details 7 3 'Structure model' pdbx_modification_feature 8 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_struct_conn.pdbx_dist_value' 8 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6QYV _pdbx_database_status.recvd_initial_deposition_date 2019-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 1WCO unspecified PDB 'solution nmr of synthetic Nisin Ring B (Lan8,11) analogue' 6QM1 unspecified PDB 'solution nmr of synthetic Mutacin I Ring B, major conformer' 6QTF unspecified PDB 'solution nmr of synthetic Mutacin I Ring B, minor conformer' 6QYR unspecified PDB 'solution nmr of synthetic nisin ring B' 6QYS unspecified PDB 'solution nmr of synthetic Mutacin I Ring A truncated analogue' 6QYT unspecified PDB 'solution nmr of synthetic mutacin I ring A' 6QYU unspecified BMRB 'Solution NMR of synthetic analogues of nisin and mutacin ring A and ring B - Mutacin I Ring A (Ser2, Ala5, Ala8) analogue' 34373 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Dickman, R.' 1 0000-0003-3139-5423 'Mitchell, S.A.' 2 ? 'Figueiredo, A.' 3 0000-0001-7039-5341 'Hansen, D.F.' 4 0000-0003-0891-220X 'Tabor, A.B.' 5 0000-0001-8216-0347 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary J.Org.Chem. JOCEAH 0035 0022-3263 ? ? 84 ? 11493 11512 ;Molecular Recognition of Lipid II by Lantibiotics: Synthesis and Conformational Studies of Analogues of Nisin and Mutacin Rings A and B. ; 2019 ? 10.1021/acs.joc.9b01253 31464129 ? ? ? ? ? ? ? ? ? ? ? 1 'To Be Published' ? 0353 ? ? ? ? ? ? ? ;A chemical biology approach to understanding molecular recognition of lipid II by nisin: Solid-phase synthesis and NMR ensemble analysis of nisin(1-12) and a synthetic ana-logue. ; ? ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dickman, R.' 1 ? primary 'Mitchell, S.A.' 2 ? primary 'Figueiredo, A.M.' 3 ? primary 'Hansen, D.F.' 4 ? primary 'Tabor, A.B.' 5 ? 1 'Dickman, R.' 6 0000-0003-3139-5423 1 'Danelius, E.' 7 0000-0002-7322-9661 1 'Mitchell, S.A.' 8 ? 1 'Hansen, D.F.' 9 0000-0003-0891-220X 1 'Erdelyi, M.' 10 0000-0003-0359-5970 1 'Tabor, A.B.' 11 0000-0001-8216-0347 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description PHE-SER-DAL-LEU-ALA-LEU-CYS-ALA _entity.formula_weight 794.959 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'FS(DAL)LALCA' _entity_poly.pdbx_seq_one_letter_code_can FSALALCA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 SER n 1 3 DAL n 1 4 LEU n 1 5 ALA n 1 6 LEU n 1 7 CYS n 1 8 ALA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Lactococcus lactis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1358 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 DAL 3 3 3 DAL DAL A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QYV _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6QYV _struct.title 'Solution NMR of synthetic analogues of nisin and mutacin ring A and ring B - Mutacin I Ring A (Ser2, Ala5, Ala8) analogue' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QYV _struct_keywords.text 'PEPTIDE ANTIBIOTIC, LANTIBIOTIC, ANTIMICROBIAL, BACTERIOCIN, THIOESTER, ANTIBIOTIC' _struct_keywords.pdbx_keywords ANTIBIOTIC # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6QYV _struct_ref.pdbx_db_accession 6QYV _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6QYV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6QYV _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 980 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 2 C ? ? ? 1_555 A DAL 3 N ? ? A SER 2 A DAL 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A DAL 3 C ? ? ? 1_555 A LEU 4 N ? ? A DAL 3 A LEU 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale none ? A DAL 3 CB ? ? ? 1_555 A CYS 7 SG ? ? A DAL 3 A CYS 7 1_555 ? ? ? ? ? ? ? 1.810 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id DAL _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 3 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 7 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id DAL _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 3 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 7 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom CB _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Non-standard linkage' # _pdbx_entry_details.entry_id 6QYV _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 9 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 2 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 H _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 DAL _pdbx_validate_close_contact.auth_seq_id_2 3 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.55 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 DAL A 3 ? ? 107.14 99.92 2 1 LEU A 4 ? ? -126.62 -69.66 3 1 LEU A 6 ? ? -147.09 47.74 4 2 LEU A 4 ? ? -151.14 -68.55 5 3 SER A 2 ? ? -75.49 38.22 6 3 LEU A 4 ? ? 150.52 -53.54 7 3 ALA A 5 ? ? -143.76 -58.24 8 3 LEU A 6 ? ? -151.77 66.43 9 4 DAL A 3 ? ? 33.88 -153.93 10 4 LEU A 4 ? ? 175.87 -62.24 11 4 ALA A 5 ? ? -144.02 -57.92 12 4 LEU A 6 ? ? -144.30 45.26 13 5 DAL A 3 ? ? 60.19 171.47 14 5 LEU A 4 ? ? 170.41 -55.85 15 5 ALA A 5 ? ? -144.30 -36.87 16 6 DAL A 3 ? ? 66.08 145.87 17 6 LEU A 4 ? ? -151.70 -68.77 18 6 ALA A 5 ? ? -143.39 -17.19 19 6 LEU A 6 ? ? -151.00 60.33 20 7 SER A 2 ? ? -45.26 159.92 21 7 DAL A 3 ? ? -58.68 -146.97 22 7 LEU A 4 ? ? 170.98 -56.32 23 7 ALA A 5 ? ? -144.52 -56.42 24 7 LEU A 6 ? ? -150.39 58.83 25 8 DAL A 3 ? ? 64.21 78.28 26 8 LEU A 4 ? ? -141.70 -68.85 27 8 ALA A 5 ? ? -142.79 -20.81 28 8 LEU A 6 ? ? -143.78 56.88 29 8 CYS A 7 ? ? -128.55 -64.45 30 9 SER A 2 ? ? -168.76 -128.06 31 9 DAL A 3 ? ? -51.99 82.43 32 9 ALA A 5 ? ? -143.54 -20.57 33 9 LEU A 6 ? ? -151.72 66.87 34 10 DAL A 3 ? ? 54.14 143.87 35 10 LEU A 4 ? ? -176.35 -63.38 36 10 CYS A 7 ? ? -162.01 -64.35 37 11 DAL A 3 ? ? 59.59 148.97 38 11 LEU A 4 ? ? -117.77 -70.40 39 11 ALA A 5 ? ? -144.29 -27.38 40 11 LEU A 6 ? ? -151.18 69.60 41 11 CYS A 7 ? ? -124.85 -71.47 42 12 DAL A 3 ? ? 77.67 71.74 43 12 LEU A 4 ? ? -119.28 -71.27 44 12 ALA A 5 ? ? -143.48 -7.13 45 13 DAL A 3 ? ? 33.01 79.78 46 13 LEU A 4 ? ? -144.28 -68.64 47 13 ALA A 5 ? ? -142.95 12.12 48 13 LEU A 6 ? ? -114.16 -73.90 49 14 LEU A 4 ? ? -154.94 -68.60 50 14 ALA A 5 ? ? -143.64 -24.81 51 14 CYS A 7 ? ? -158.40 -67.42 52 15 DAL A 3 ? ? 53.71 115.93 53 15 LEU A 4 ? ? -124.71 -69.40 54 15 ALA A 5 ? ? -143.10 -19.67 55 15 CYS A 7 ? ? -46.14 -13.50 # _pdbx_nmr_ensemble.entry_id 6QYV _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6QYV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.7 mg/mL Mutacin I Ring A (Ser2, Ala5, Ala8) analogue, DMSO' _pdbx_nmr_sample_details.solvent_system DMSO _pdbx_nmr_sample_details.label sample_1 _pdbx_nmr_sample_details.type 'lyophilized powder' _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'Mutacin I Ring A (Ser2, Ala5, Ala8) analogue' _pdbx_nmr_exptl_sample.concentration 0.7 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mg/mL _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 'TFA salt' _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label DMSO_rt _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H COSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-13C HSQC' 1 isotropic 4 1 1 '2D 1H-13C HMBC' 1 isotropic # _pdbx_nmr_refine.entry_id 6QYV _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' Xplor-NIH 2.45 'Schwieters, Kuszewski, Tjandra and Clore' 2 refinement Xplor-NIH 2.45 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 4 'peak picking' 'CcpNmr Analysis' ? CCPN # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CYS N N N N 14 CYS CA C N R 15 CYS C C N N 16 CYS O O N N 17 CYS CB C N N 18 CYS SG S N N 19 CYS OXT O N N 20 CYS H H N N 21 CYS H2 H N N 22 CYS HA H N N 23 CYS HB2 H N N 24 CYS HB3 H N N 25 CYS HG H N N 26 CYS HXT H N N 27 DAL N N N N 28 DAL CA C N R 29 DAL CB C N N 30 DAL C C N N 31 DAL O O N N 32 DAL OXT O N N 33 DAL H H N N 34 DAL H2 H N N 35 DAL HA H N N 36 DAL HB1 H N N 37 DAL HB2 H N N 38 DAL HB3 H N N 39 DAL HXT H N N 40 LEU N N N N 41 LEU CA C N S 42 LEU C C N N 43 LEU O O N N 44 LEU CB C N N 45 LEU CG C N N 46 LEU CD1 C N N 47 LEU CD2 C N N 48 LEU OXT O N N 49 LEU H H N N 50 LEU H2 H N N 51 LEU HA H N N 52 LEU HB2 H N N 53 LEU HB3 H N N 54 LEU HG H N N 55 LEU HD11 H N N 56 LEU HD12 H N N 57 LEU HD13 H N N 58 LEU HD21 H N N 59 LEU HD22 H N N 60 LEU HD23 H N N 61 LEU HXT H N N 62 PHE N N N N 63 PHE CA C N S 64 PHE C C N N 65 PHE O O N N 66 PHE CB C N N 67 PHE CG C Y N 68 PHE CD1 C Y N 69 PHE CD2 C Y N 70 PHE CE1 C Y N 71 PHE CE2 C Y N 72 PHE CZ C Y N 73 PHE OXT O N N 74 PHE H H N N 75 PHE H2 H N N 76 PHE HA H N N 77 PHE HB2 H N N 78 PHE HB3 H N N 79 PHE HD1 H N N 80 PHE HD2 H N N 81 PHE HE1 H N N 82 PHE HE2 H N N 83 PHE HZ H N N 84 PHE HXT H N N 85 SER N N N N 86 SER CA C N S 87 SER C C N N 88 SER O O N N 89 SER CB C N N 90 SER OG O N N 91 SER OXT O N N 92 SER H H N N 93 SER H2 H N N 94 SER HA H N N 95 SER HB2 H N N 96 SER HB3 H N N 97 SER HG H N N 98 SER HXT H N N 99 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 CYS N CA sing N N 13 CYS N H sing N N 14 CYS N H2 sing N N 15 CYS CA C sing N N 16 CYS CA CB sing N N 17 CYS CA HA sing N N 18 CYS C O doub N N 19 CYS C OXT sing N N 20 CYS CB SG sing N N 21 CYS CB HB2 sing N N 22 CYS CB HB3 sing N N 23 CYS SG HG sing N N 24 CYS OXT HXT sing N N 25 DAL N CA sing N N 26 DAL N H sing N N 27 DAL N H2 sing N N 28 DAL CA CB sing N N 29 DAL CA C sing N N 30 DAL CA HA sing N N 31 DAL CB HB1 sing N N 32 DAL CB HB2 sing N N 33 DAL CB HB3 sing N N 34 DAL C O doub N N 35 DAL C OXT sing N N 36 DAL OXT HXT sing N N 37 LEU N CA sing N N 38 LEU N H sing N N 39 LEU N H2 sing N N 40 LEU CA C sing N N 41 LEU CA CB sing N N 42 LEU CA HA sing N N 43 LEU C O doub N N 44 LEU C OXT sing N N 45 LEU CB CG sing N N 46 LEU CB HB2 sing N N 47 LEU CB HB3 sing N N 48 LEU CG CD1 sing N N 49 LEU CG CD2 sing N N 50 LEU CG HG sing N N 51 LEU CD1 HD11 sing N N 52 LEU CD1 HD12 sing N N 53 LEU CD1 HD13 sing N N 54 LEU CD2 HD21 sing N N 55 LEU CD2 HD22 sing N N 56 LEU CD2 HD23 sing N N 57 LEU OXT HXT sing N N 58 PHE N CA sing N N 59 PHE N H sing N N 60 PHE N H2 sing N N 61 PHE CA C sing N N 62 PHE CA CB sing N N 63 PHE CA HA sing N N 64 PHE C O doub N N 65 PHE C OXT sing N N 66 PHE CB CG sing N N 67 PHE CB HB2 sing N N 68 PHE CB HB3 sing N N 69 PHE CG CD1 doub Y N 70 PHE CG CD2 sing Y N 71 PHE CD1 CE1 sing Y N 72 PHE CD1 HD1 sing N N 73 PHE CD2 CE2 doub Y N 74 PHE CD2 HD2 sing N N 75 PHE CE1 CZ doub Y N 76 PHE CE1 HE1 sing N N 77 PHE CE2 CZ sing Y N 78 PHE CE2 HE2 sing N N 79 PHE CZ HZ sing N N 80 PHE OXT HXT sing N N 81 SER N CA sing N N 82 SER N H sing N N 83 SER N H2 sing N N 84 SER CA C sing N N 85 SER CA CB sing N N 86 SER CA HA sing N N 87 SER C O doub N N 88 SER C OXT sing N N 89 SER CB OG sing N N 90 SER CB HB2 sing N N 91 SER CB HB3 sing N N 92 SER OG HG sing N N 93 SER OXT HXT sing N N 94 # _pdbx_audit_support.funding_organization 'Engineering and Physical Sciences Research Council' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number EP/L504889/1 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6QYV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ #