HEADER STRUCTURAL PROTEIN 18-MAR-19 6R2I TITLE CRYSTAL STRUCTURE OF THE SUN1-KASH5 6:6 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUN DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN UNC-84 HOMOLOG A,SAD1/UNC-84 PROTEIN-LIKE 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: KASH5; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUN1, KIAA0810, UNC84A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUN1, KASH5, LINC COMPLEX, NUCLEOSKELETON, CYTOSKELETON, NUCLEAR KEYWDS 2 ENVELOPE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.GURUSARAN,O.R.DAVIES REVDAT 3 24-JAN-24 6R2I 1 REMARK REVDAT 2 03-FEB-21 6R2I 1 JRNL REMARK REVDAT 1 15-JUL-20 6R2I 0 JRNL AUTH M.GURUSARAN,O.R.DAVIES JRNL TITL A MOLECULAR MECHANISM FOR LINC COMPLEX BRANCHING BY JRNL TITL 2 STRUCTURALLY DIVERSE SUN-KASH 6:6 ASSEMBLIES. JRNL REF ELIFE V. 10 2021 JRNL REFN ESSN 2050-084X JRNL PMID 33393904 JRNL DOI 10.7554/ELIFE.60175 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 49373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.9921 - 4.0328 1.00 2961 157 0.1823 0.1779 REMARK 3 2 4.0328 - 3.2034 1.00 2788 128 0.1435 0.1601 REMARK 3 3 3.2034 - 2.7991 1.00 2738 147 0.1493 0.1649 REMARK 3 4 2.7991 - 2.5435 1.00 2703 138 0.1445 0.1594 REMARK 3 5 2.5435 - 2.3614 1.00 2678 134 0.1372 0.1489 REMARK 3 6 2.3614 - 2.2223 1.00 2666 152 0.1384 0.1436 REMARK 3 7 2.2223 - 2.1110 1.00 2664 132 0.1350 0.1716 REMARK 3 8 2.1110 - 2.0192 1.00 2658 137 0.1350 0.1826 REMARK 3 9 2.0192 - 1.9415 1.00 1792 79 0.1311 0.1660 REMARK 3 10 1.9415 - 1.8745 0.99 2327 114 0.1335 0.1793 REMARK 3 11 1.8745 - 1.8159 1.00 2641 148 0.1213 0.1746 REMARK 3 12 1.8159 - 1.7640 1.00 2628 143 0.1194 0.1627 REMARK 3 13 1.7640 - 1.7176 1.00 2644 120 0.1278 0.1804 REMARK 3 14 1.7176 - 1.6757 1.00 2607 141 0.1284 0.1823 REMARK 3 15 1.6757 - 1.6376 1.00 2615 143 0.1411 0.1789 REMARK 3 16 1.6376 - 1.6028 1.00 2604 150 0.1497 0.2143 REMARK 3 17 1.6028 - 1.5707 1.00 2595 150 0.1682 0.1753 REMARK 3 18 1.5707 - 1.5411 1.00 2602 149 0.1902 0.2387 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1878 REMARK 3 ANGLE : 1.076 2574 REMARK 3 CHIRALITY : 0.066 275 REMARK 3 PLANARITY : 0.008 341 REMARK 3 DIHEDRAL : 12.612 1120 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6R2I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAR-19. REMARK 100 THE DEPOSITION ID IS D_1292101320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS, AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49458 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 88.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 21.30 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.51500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6R15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12M 1,6-HEXANEDIOL; 0.12M 1-BUTANOL REMARK 280 1,2-PROPANEDIOL (RACEMIC); 0.12M 2-PROPANOL; 0.12M 1,4- REMARK 280 BUTANEDIOL; 0.12M 1,3-PROPANEDIOL; 0.1M IMIDAZOLE PH 6.5 ; 0.1M REMARK 280 MES (ACID) PH 6.5; 18% GLYCEROL; 18% PEG 4K, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.81000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 88.81000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.81000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 88.81000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 88.81000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 88.81000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -245.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 40.08150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 69.42319 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -40.08150 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 69.42319 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 40.08150 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 69.42319 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 88.81000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 88.81000 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 -40.08150 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 69.42319 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 88.81000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1155 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1265 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1287 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1300 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 610 REMARK 465 SER A 611 REMARK 465 GLY A 612 REMARK 465 GLY A 613 REMARK 465 SER A 614 REMARK 465 GLY B 530 REMARK 465 SER B 531 REMARK 465 MET B 532 REMARK 465 THR B 533 REMARK 465 SER B 534 REMARK 465 GLY B 535 REMARK 465 THR B 536 REMARK 465 SER B 537 REMARK 465 GLY B 538 REMARK 465 THR B 539 REMARK 465 SER B 540 REMARK 465 GLY B 541 REMARK 465 GLY B 542 REMARK 465 PRO B 543 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 702 O HOH A 1001 1.99 REMARK 500 O HOH A 1151 O HOH A 1222 2.03 REMARK 500 O HOH A 1194 O HOH A 1203 2.04 REMARK 500 O HOH A 1259 O HOH A 1296 2.05 REMARK 500 O HOH A 1113 O HOH A 1210 2.06 REMARK 500 O HOH A 1200 O HOH A 1247 2.08 REMARK 500 O HOH A 1080 O HOH A 1262 2.09 REMARK 500 O HOH A 1082 O HOH A 1251 2.09 REMARK 500 ND2 ASN A 732 O HOH A 1002 2.15 REMARK 500 O HOH A 1029 O HOH A 1044 2.16 REMARK 500 O GLU A 659 O HOH A 1003 2.16 REMARK 500 O HOH A 1015 O HOH A 1225 2.17 REMARK 500 O HOH A 1176 O HOH A 1200 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1184 O HOH A 1184 7556 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 635 59.51 -92.58 REMARK 500 LYS A 637 -26.65 67.39 REMARK 500 LYS A 738 -83.37 -115.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1299 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH A1300 DISTANCE = 6.24 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 901 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 684 O REMARK 620 2 VAL A 684 O 3.4 REMARK 620 3 GLN A 687 O 72.7 76.0 REMARK 620 4 ASP A 689 O 150.2 151.5 89.6 REMARK 620 5 ASN A 694 O 113.0 109.6 169.6 81.5 REMARK 620 6 TYR A 802 O 82.6 82.2 102.2 125.4 87.4 REMARK 620 7 HOH A1186 O 90.7 90.1 91.5 65.4 80.0 162.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6R15 RELATED DB: PDB REMARK 900 6R15 IS THE SAME SUN1 PROTEIN IN COMPLEX WITH PARALOGUE PROTEIN REMARK 900 KASH1 REMARK 900 RELATED ID: 6R16 RELATED DB: PDB REMARK 900 6R16 IS THE SAME SUN1 PROTEIN IN COMPLEX WITH PARALOGUE PROTEIN REMARK 900 KASH4 DBREF 6R2I A 616 812 UNP O94901 SUN1_HUMAN 616 812 DBREF 6R2I B 530 562 PDB 6R2I 6R2I 530 562 SEQADV 6R2I GLY A 610 UNP O94901 EXPRESSION TAG SEQADV 6R2I SER A 611 UNP O94901 EXPRESSION TAG SEQADV 6R2I GLY A 612 UNP O94901 EXPRESSION TAG SEQADV 6R2I GLY A 613 UNP O94901 EXPRESSION TAG SEQADV 6R2I SER A 614 UNP O94901 EXPRESSION TAG SEQADV 6R2I GLY A 615 UNP O94901 EXPRESSION TAG SEQRES 1 A 203 GLY SER GLY GLY SER GLY GLY ILE THR GLU ALA GLN ALA SEQRES 2 A 203 ARG ALA ILE VAL ASN SER ALA LEU LYS LEU TYR SER GLN SEQRES 3 A 203 ASP LYS THR GLY MET VAL ASP PHE ALA LEU GLU SER GLY SEQRES 4 A 203 GLY GLY SER ILE LEU SER THR ARG CYS SER GLU THR TYR SEQRES 5 A 203 GLU THR LYS THR ALA LEU MET SER LEU PHE GLY ILE PRO SEQRES 6 A 203 LEU TRP TYR PHE SER GLN SER PRO ARG VAL VAL ILE GLN SEQRES 7 A 203 PRO ASP ILE TYR PRO GLY ASN CYS TRP ALA PHE LYS GLY SEQRES 8 A 203 SER GLN GLY TYR LEU VAL VAL ARG LEU SER MET MET ILE SEQRES 9 A 203 HIS PRO ALA ALA PHE THR LEU GLU HIS ILE PRO LYS THR SEQRES 10 A 203 LEU SER PRO THR GLY ASN ILE SER SER ALA PRO LYS ASP SEQRES 11 A 203 PHE ALA VAL TYR GLY LEU GLU ASN GLU TYR GLN GLU GLU SEQRES 12 A 203 GLY GLN LEU LEU GLY GLN PHE THR TYR ASP GLN ASP GLY SEQRES 13 A 203 GLU SER LEU GLN MET PHE GLN ALA LEU LYS ARG PRO ASP SEQRES 14 A 203 ASP THR ALA PHE GLN ILE VAL GLU LEU ARG ILE PHE SER SEQRES 15 A 203 ASN TRP GLY HIS PRO GLU TYR THR CYS LEU TYR ARG PHE SEQRES 16 A 203 ARG VAL HIS GLY GLU PRO VAL LYS SEQRES 1 B 33 GLY SER MET THR SER GLY THR SER GLY THR SER GLY GLY SEQRES 2 B 33 PRO SER PRO PRO PRO THR TRP PRO HIS LEU GLN LEU CYS SEQRES 3 B 33 TYR LEU GLN PRO PRO PRO VAL HET K A 901 1 HETNAM K POTASSIUM ION FORMUL 3 K K 1+ FORMUL 4 HOH *309(H2 O) HELIX 1 AA1 THR A 618 GLN A 635 1 18 HELIX 2 AA2 LEU A 645 GLY A 649 5 5 HELIX 3 AA3 SER A 654 CYS A 657 5 4 HELIX 4 AA4 SER A 681 GLN A 687 5 7 HELIX 5 AA5 PRO A 724 SER A 728 5 5 SHEET 1 AA1 3 SER A 651 ILE A 652 0 SHEET 2 AA1 3 GLY A 703 GLU A 721 -1 O ARG A 708 N SER A 651 SHEET 3 AA1 3 LEU A 768 GLN A 772 -1 O PHE A 771 N PHE A 718 SHEET 1 AA2 5 GLN A 754 THR A 760 0 SHEET 2 AA2 5 ASP A 739 LEU A 745 -1 N VAL A 742 O LEU A 756 SHEET 3 AA2 5 PHE A 782 ILE A 789 -1 O ARG A 788 N ALA A 741 SHEET 4 AA2 5 GLY A 703 GLU A 721 -1 N LEU A 705 O LEU A 787 SHEET 5 AA2 5 ARG A 803 PRO A 810 -1 O HIS A 807 N ALA A 717 SHEET 1 AA3 2 ALA A 666 LEU A 670 0 SHEET 2 AA3 2 ILE A 673 PHE A 678 -1 O TRP A 676 N MET A 668 SHEET 1 AA4 2 TRP A 696 LYS A 699 0 SHEET 2 AA4 2 TYR A 798 LEU A 801 -1 O LEU A 801 N TRP A 696 LINK O AVAL A 684 K K A 901 1555 1555 2.67 LINK O BVAL A 684 K K A 901 1555 1555 2.61 LINK O GLN A 687 K K A 901 1555 1555 2.91 LINK O ASP A 689 K K A 901 1555 1555 2.65 LINK O ASN A 694 K K A 901 1555 1555 3.04 LINK O TYR A 802 K K A 901 1555 1555 2.66 LINK K K A 901 O HOH A1186 1555 1555 3.02 SITE 1 AC1 6 VAL A 684 GLN A 687 ASP A 689 ASN A 694 SITE 2 AC1 6 TYR A 802 HOH A1186 CRYST1 80.163 80.163 177.620 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012475 0.007202 0.000000 0.00000 SCALE2 0.000000 0.014404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005630 0.00000