data_6R47 # _entry.id 6R47 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6R47 pdb_00006r47 10.2210/pdb6r47/pdb WWPDB D_1292101362 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-03 2 'Structure model' 1 1 2019-08-21 3 'Structure model' 1 2 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.value' 11 3 'Structure model' '_struct_conn.pdbx_dist_value' 12 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6R47 _pdbx_database_status.recvd_initial_deposition_date 2019-03-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lilley, D.M.J.' 1 ? 'Wilson, T.M.' 2 ? 'Liu, Y.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 141 _citation.language ? _citation.page_first 7865 _citation.page_last 7875 _citation.title 'Comparison of the Structures and Mechanisms of the Pistol and Hammerhead Ribozymes.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.9b02141 _citation.pdbx_database_id_PubMed 31017785 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wilson, T.J.' 1 ? primary 'Liu, Y.' 2 ? primary 'Li, N.S.' 3 0000-0002-1185-3688 primary 'Dai, Q.' 4 ? primary 'Piccirilli, J.A.' 5 0000-0002-0541-6270 primary 'Lilley, D.M.J.' 6 0000-0001-6882-2818 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (50-MER)' 16156.515 1 ? ? ? ? 2 polymer syn RNA 4926.018 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 5 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'GGCCGUUCGGGCGGCCAUAAACAGCCCUCAGACC(CBV)GAAGCGUGGCGUUCC' GGCCGUUCGGGCGGCCAUAAACAGCCCUCAGACCCGAAGCGUGGCGUUCC A ? 2 polyribonucleotide no no GGAACGCCGGUGGGA GGAACGCCGGUGGGA B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 G n 1 6 U n 1 7 U n 1 8 C n 1 9 G n 1 10 G n 1 11 G n 1 12 C n 1 13 G n 1 14 G n 1 15 C n 1 16 C n 1 17 A n 1 18 U n 1 19 A n 1 20 A n 1 21 A n 1 22 C n 1 23 A n 1 24 G n 1 25 C n 1 26 C n 1 27 C n 1 28 U n 1 29 C n 1 30 A n 1 31 G n 1 32 A n 1 33 C n 1 34 C n 1 35 CBV n 1 36 G n 1 37 A n 1 38 A n 1 39 G n 1 40 C n 1 41 G n 1 42 U n 1 43 G n 1 44 G n 1 45 C n 1 46 G n 1 47 U n 1 48 U n 1 49 C n 1 50 C n 2 1 G n 2 2 G n 2 3 A n 2 4 A n 2 5 C n 2 6 G n 2 7 C n 2 8 C n 2 9 G n 2 10 G n 2 11 U n 2 12 G n 2 13 G n 2 14 G n 2 15 A n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 50 'Alistipes putredinis' ? 28117 ? 2 1 sample 1 15 'Alistipes putredinis' ? 28117 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CBV 'RNA linking' n ;5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE) ; ? 'C9 H13 Br N3 O8 P' 402.093 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 2 2 G G A . n A 1 2 G 2 3 3 G G A . n A 1 3 C 3 4 4 C C A . n A 1 4 C 4 5 5 C C A . n A 1 5 G 5 6 6 G G A . n A 1 6 U 6 7 7 U U A . n A 1 7 U 7 8 8 U U A . n A 1 8 C 8 9 9 C C A . n A 1 9 G 9 10 10 G G A . n A 1 10 G 10 11 11 G G A . n A 1 11 G 11 12 12 G G A . n A 1 12 C 12 13 13 C C A . n A 1 13 G 13 14 14 G G A . n A 1 14 G 14 15 15 G G A . n A 1 15 C 15 16 16 C C A . n A 1 16 C 16 17 17 C C A . n A 1 17 A 17 18 18 A A A . n A 1 18 U 18 19 19 U U A . n A 1 19 A 19 20 20 A A A . n A 1 20 A 20 21 21 A A A . n A 1 21 A 21 22 22 A A A . n A 1 22 C 22 23 23 C C A . n A 1 23 A 23 24 24 A A A . n A 1 24 G 24 25 25 G G A . n A 1 25 C 25 26 26 C C A . n A 1 26 C 26 27 27 C C A . n A 1 27 C 27 28 28 C C A . n A 1 28 U 28 29 29 U U A . n A 1 29 C 29 30 30 C C A . n A 1 30 A 30 31 31 A A A . n A 1 31 G 31 32 32 G G A . n A 1 32 A 32 33 33 A A A . n A 1 33 C 33 34 34 C C A . n A 1 34 C 34 35 35 C C A . n A 1 35 CBV 35 36 36 CBV BRC A . n A 1 36 G 36 37 37 G G A . n A 1 37 A 37 38 38 A A A . n A 1 38 A 38 39 39 A A A . n A 1 39 G 39 40 40 G G A . n A 1 40 C 40 41 41 C C A . n A 1 41 G 41 42 42 G G A . n A 1 42 U 42 43 43 U U A . n A 1 43 G 43 44 44 G G A . n A 1 44 G 44 45 45 G G A . n A 1 45 C 45 46 46 C C A . n A 1 46 G 46 47 47 G G A . n A 1 47 U 47 48 48 U U A . n A 1 48 U 48 49 49 U U A . n A 1 49 C 49 50 50 C C A . n A 1 50 C 50 51 51 C C A . n B 2 1 G 1 52 52 G G B . n B 2 2 G 2 53 53 G G B . n B 2 3 A 3 54 54 A A B . n B 2 4 A 4 55 55 A A B . n B 2 5 C 5 56 56 C C B . n B 2 6 G 6 57 57 G G B . n B 2 7 C 7 58 58 C C B . n B 2 8 C 8 59 59 C C B . n B 2 9 G 9 60 60 G G B . n B 2 10 G 10 61 61 G G B . n B 2 11 U 11 62 62 U U B . n B 2 12 G 12 63 63 G G B . n B 2 13 G 13 64 64 G G B . n B 2 14 G 14 65 65 G G B . n B 2 15 A 15 66 66 A A B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 101 67 MG MG A . D 4 HOH 1 201 69 HOH HOH A . D 4 HOH 2 202 71 HOH HOH A . D 4 HOH 3 203 68 HOH HOH A . D 4 HOH 4 204 70 HOH HOH A . E 4 HOH 1 101 72 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A G 2 ? "O5'" ? A G 1 "O5'" 2 1 Y 1 B G 61 ? "O2'" ? B G 10 "O2'" # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6R47 _cell.details ? _cell.formula_units_Z ? _cell.length_a 94.309 _cell.length_a_esd ? _cell.length_b 94.309 _cell.length_b_esd ? _cell.length_c 96.031 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R47 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6R47 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 6.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 79.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.01 M Magnesium sulphate heptahydrate 0.05 M Sodium cacodylate trihydrate pH 6.0 1.8 M Lithium sulphate monohydrate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 94 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-01 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9686 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9686 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6R47 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 81.67 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8853 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 9.4 _reflns.pdbx_netI_over_sigmaI 9.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.971 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.31 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1592 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 209.170 _refine.B_iso_mean 137.45 _refine.B_iso_min 108.910 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6R47 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.1000 _refine.ls_d_res_low 81.67 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8834 _refine.ls_number_reflns_R_free 437 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1762 _refine.ls_R_factor_R_free 0.1802 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1759 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.5 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.6800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 3.1000 _refine_hist.d_res_low 81.67 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 1396 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 65 _refine_hist.pdbx_B_iso_mean_ligand 116.01 _refine_hist.pdbx_B_iso_mean_solvent 140.66 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1390 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 ? 1554 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.400 ? 2424 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.045 ? 321 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 65 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.428 ? 761 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.1001 3.2943 2753 . 139 2614 95.0000 . . . 0.3527 0.0000 0.3215 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 3.2943 3.5486 2746 . 133 2613 95.0000 . . . 0.2452 0.0000 0.2563 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 3.5486 3.9057 2694 . 150 2544 94.0000 . . . 0.2183 0.0000 0.2080 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 3.9057 4.4707 2794 . 136 2658 96.0000 . . . 0.1908 0.0000 0.1787 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 4.4707 5.6321 2789 . 165 2624 96.0000 . . . 0.1794 0.0000 0.1583 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 5.6321 62.2281 2754 . 167 2587 96.0000 . . . 0.1567 0.0000 0.1569 . . . . . . 6 . . . # _struct.entry_id 6R47 _struct.title 'The structure of pistol ribozyme bound to magnesium' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6R47 _struct_keywords.text 'RNA, ribozyme, pseudoknot, Magnesium' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6R47 6R47 ? 1 ? 1 2 PDB 6R47 6R47 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6R47 A 1 ? 50 ? 6R47 2 ? 51 ? 2 51 2 2 6R47 B 1 ? 15 ? 6R47 52 ? 66 ? 52 66 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2520 ? 1 MORE -17 ? 1 'SSA (A^2)' 10280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 34 "O3'" ? ? ? 1_555 A CBV 35 P ? ? A C 35 A CBV 36 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale2 covale one ? A CBV 35 "O3'" ? ? ? 1_555 A G 36 P ? ? A CBV 36 A G 37 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 201 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 202 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 203 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 204 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 B HOH 101 1_555 ? ? ? ? ? ? ? 2.171 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 16 N3 ? ? A G 2 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 16 O2 ? ? A G 2 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 16 N4 ? ? A G 2 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 2 N2 ? ? ? 1_555 A U 18 O4 ? ? A G 3 A U 19 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog8 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 14 N1 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 14 O6 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 14 N2 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 5 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 5 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 5 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 20 N6 ? ? A C 5 A A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog15 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 21 N6 ? ? A C 5 A A 22 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog16 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 12 N3 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 12 O2 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 12 N4 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 24 N3 ? ? A G 6 A G 25 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog20 hydrog ? ? A G 5 N3 ? ? ? 1_555 A G 24 N2 ? ? A G 6 A G 25 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog21 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 7 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 7 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 37 N1 ? ? A U 8 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 37 N6 ? ? A U 8 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 36 N1 ? ? A C 9 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 36 O6 ? ? A C 9 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 36 N2 ? ? A C 9 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 9 N1 ? ? ? 1_555 A CBV 35 N3 ? ? A G 10 A CBV 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 9 N2 ? ? ? 1_555 A CBV 35 O2 ? ? A G 10 A CBV 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 9 O6 ? ? ? 1_555 A CBV 35 N4 ? ? A G 10 A CBV 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 11 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 11 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 11 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 33 N3 ? ? A G 12 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 33 O2 ? ? A G 12 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 33 N4 ? ? A G 12 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 13 N2 ? ? ? 1_555 A A 21 N1 ? ? A G 14 A A 22 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog38 hydrog ? ? A G 14 N3 ? ? ? 1_555 A A 20 N6 ? ? A G 15 A A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog39 hydrog ? ? A C 15 O2 ? ? ? 1_555 A A 19 N6 ? ? A C 16 A A 20 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog40 hydrog ? ? A C 25 N3 ? ? ? 1_555 B G 14 N1 ? ? A C 26 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 25 N4 ? ? ? 1_555 B G 14 O6 ? ? A C 26 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 25 O2 ? ? ? 1_555 B G 14 N2 ? ? A C 26 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 26 N3 ? ? ? 1_555 B G 13 N1 ? ? A C 27 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 26 N4 ? ? ? 1_555 B G 13 O6 ? ? A C 27 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 26 O2 ? ? ? 1_555 B G 13 N2 ? ? A C 27 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 27 N3 ? ? ? 1_555 B G 12 N1 ? ? A C 28 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 27 N4 ? ? ? 1_555 B G 12 O6 ? ? A C 28 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 27 O2 ? ? ? 1_555 B G 12 N2 ? ? A C 28 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 28 N3 ? ? ? 1_555 B U 11 O4 ? ? A U 29 B U 62 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog50 hydrog ? ? A U 28 O2 ? ? ? 1_555 B U 11 N3 ? ? A U 29 B U 62 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog51 hydrog ? ? A A 32 N1 ? ? ? 1_555 A C 40 N4 ? ? A A 33 A C 41 1_555 ? ? ? ? ? ? TYPE_26_PAIR ? ? ? hydrog52 hydrog ? ? A A 32 N6 ? ? ? 1_555 A C 40 N3 ? ? A A 33 A C 41 1_555 ? ? ? ? ? ? TYPE_26_PAIR ? ? ? hydrog53 hydrog ? ? A G 39 N2 ? ? ? 1_555 A G 41 O6 ? ? A G 40 A G 42 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog54 hydrog ? ? A G 41 O6 ? ? ? 1_555 B G 10 N2 ? ? A G 42 B G 61 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog55 hydrog ? ? A U 42 O4 ? ? ? 1_555 B G 9 N2 ? ? A U 43 B G 60 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog56 hydrog ? ? A U 42 O4 ? ? ? 1_555 B G 10 N2 ? ? A U 43 B G 61 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog57 hydrog ? ? A G 43 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 44 B C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 43 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 44 B C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 43 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 44 B C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 44 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 45 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 44 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 45 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 44 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 45 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 45 N3 ? ? ? 1_555 B G 6 N1 ? ? A C 46 B G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 45 N4 ? ? ? 1_555 B G 6 O6 ? ? A C 46 B G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 45 O2 ? ? ? 1_555 B G 6 N2 ? ? A C 46 B G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 46 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 46 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 46 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 47 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A U 47 N3 ? ? ? 1_555 B A 4 N1 ? ? A U 48 B A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A U 47 O4 ? ? ? 1_555 B A 4 N6 ? ? A U 48 B A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A U 48 N3 ? ? ? 1_555 B A 3 N1 ? ? A U 49 B A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A U 48 O4 ? ? ? 1_555 B A 3 N6 ? ? A U 49 B A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 49 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 50 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 49 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 50 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 49 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 50 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 50 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 51 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 50 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 51 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 50 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 51 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? A HOH 201 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 202 ? 1_555 177.2 ? 2 O ? D HOH . ? A HOH 201 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 84.0 ? 3 O ? D HOH . ? A HOH 202 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 94.0 ? 4 O ? D HOH . ? A HOH 201 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 95.4 ? 5 O ? D HOH . ? A HOH 202 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 86.6 ? 6 O ? D HOH . ? A HOH 203 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 179.4 ? 7 O ? D HOH . ? A HOH 201 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 101 ? 1_555 95.6 ? 8 O ? D HOH . ? A HOH 202 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 101 ? 1_555 86.4 ? 9 O ? D HOH . ? A HOH 203 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 101 ? 1_555 91.6 ? 10 O ? D HOH . ? A HOH 204 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 101 ? 1_555 88.7 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue MG A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 A A 32 ? A A 33 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 201 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 202 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 203 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 204 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH B 101 . ? 1_555 ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 165.1601 _pdbx_refine_tls.origin_y 117.6916 _pdbx_refine_tls.origin_z -7.8874 _pdbx_refine_tls.T[1][1] 1.2375 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0107 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.2730 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 1.5260 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0908 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 1.3551 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.8075 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -1.6948 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.2032 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.5684 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.2060 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.4318 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0634 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.1139 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.2441 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0211 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0352 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.1130 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0466 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0862 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0324 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 2 ? ? A 51 ? all 2 'X-RAY DIFFRACTION' 1 ? ? B 52 ? ? B 72 ? all # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CBV O3P O N N 73 CBV P P N N 74 CBV O1P O N N 75 CBV O2P O N N 76 CBV "O5'" O N N 77 CBV "C5'" C N N 78 CBV "C4'" C N R 79 CBV "O4'" O N N 80 CBV "C3'" C N S 81 CBV "O3'" O N N 82 CBV "C2'" C N R 83 CBV "O2'" O N N 84 CBV "C1'" C N R 85 CBV N1 N N N 86 CBV C2 C N N 87 CBV O2 O N N 88 CBV N3 N N N 89 CBV C4 C N N 90 CBV N4 N N N 91 CBV C5 C N N 92 CBV C6 C N N 93 CBV BR BR N N 94 CBV HO3P H N N 95 CBV HO1P H N N 96 CBV "H5'1" H N N 97 CBV "H5'2" H N N 98 CBV "H4'" H N N 99 CBV "H3'" H N N 100 CBV "HO3'" H N N 101 CBV "H2'" H N N 102 CBV "HO2'" H N N 103 CBV "H1'" H N N 104 CBV HN41 H N N 105 CBV HN42 H N N 106 CBV H6 H N N 107 G OP3 O N N 108 G P P N N 109 G OP1 O N N 110 G OP2 O N N 111 G "O5'" O N N 112 G "C5'" C N N 113 G "C4'" C N R 114 G "O4'" O N N 115 G "C3'" C N S 116 G "O3'" O N N 117 G "C2'" C N R 118 G "O2'" O N N 119 G "C1'" C N R 120 G N9 N Y N 121 G C8 C Y N 122 G N7 N Y N 123 G C5 C Y N 124 G C6 C N N 125 G O6 O N N 126 G N1 N N N 127 G C2 C N N 128 G N2 N N N 129 G N3 N N N 130 G C4 C Y N 131 G HOP3 H N N 132 G HOP2 H N N 133 G "H5'" H N N 134 G "H5''" H N N 135 G "H4'" H N N 136 G "H3'" H N N 137 G "HO3'" H N N 138 G "H2'" H N N 139 G "HO2'" H N N 140 G "H1'" H N N 141 G H8 H N N 142 G H1 H N N 143 G H21 H N N 144 G H22 H N N 145 HOH O O N N 146 HOH H1 H N N 147 HOH H2 H N N 148 MG MG MG N N 149 U OP3 O N N 150 U P P N N 151 U OP1 O N N 152 U OP2 O N N 153 U "O5'" O N N 154 U "C5'" C N N 155 U "C4'" C N R 156 U "O4'" O N N 157 U "C3'" C N S 158 U "O3'" O N N 159 U "C2'" C N R 160 U "O2'" O N N 161 U "C1'" C N R 162 U N1 N N N 163 U C2 C N N 164 U O2 O N N 165 U N3 N N N 166 U C4 C N N 167 U O4 O N N 168 U C5 C N N 169 U C6 C N N 170 U HOP3 H N N 171 U HOP2 H N N 172 U "H5'" H N N 173 U "H5''" H N N 174 U "H4'" H N N 175 U "H3'" H N N 176 U "HO3'" H N N 177 U "H2'" H N N 178 U "HO2'" H N N 179 U "H1'" H N N 180 U H3 H N N 181 U H5 H N N 182 U H6 H N N 183 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CBV O3P P sing N N 76 CBV O3P HO3P sing N N 77 CBV P O1P sing N N 78 CBV P O2P doub N N 79 CBV P "O5'" sing N N 80 CBV O1P HO1P sing N N 81 CBV "O5'" "C5'" sing N N 82 CBV "C5'" "C4'" sing N N 83 CBV "C5'" "H5'1" sing N N 84 CBV "C5'" "H5'2" sing N N 85 CBV "C4'" "O4'" sing N N 86 CBV "C4'" "C3'" sing N N 87 CBV "C4'" "H4'" sing N N 88 CBV "O4'" "C1'" sing N N 89 CBV "C3'" "O3'" sing N N 90 CBV "C3'" "C2'" sing N N 91 CBV "C3'" "H3'" sing N N 92 CBV "O3'" "HO3'" sing N N 93 CBV "C2'" "O2'" sing N N 94 CBV "C2'" "C1'" sing N N 95 CBV "C2'" "H2'" sing N N 96 CBV "O2'" "HO2'" sing N N 97 CBV "C1'" N1 sing N N 98 CBV "C1'" "H1'" sing N N 99 CBV N1 C2 sing N N 100 CBV N1 C6 sing N N 101 CBV C2 O2 doub N N 102 CBV C2 N3 sing N N 103 CBV N3 C4 doub N N 104 CBV C4 N4 sing N N 105 CBV C4 C5 sing N N 106 CBV N4 HN41 sing N N 107 CBV N4 HN42 sing N N 108 CBV C5 C6 doub N N 109 CBV C5 BR sing N N 110 CBV C6 H6 sing N N 111 G OP3 P sing N N 112 G OP3 HOP3 sing N N 113 G P OP1 doub N N 114 G P OP2 sing N N 115 G P "O5'" sing N N 116 G OP2 HOP2 sing N N 117 G "O5'" "C5'" sing N N 118 G "C5'" "C4'" sing N N 119 G "C5'" "H5'" sing N N 120 G "C5'" "H5''" sing N N 121 G "C4'" "O4'" sing N N 122 G "C4'" "C3'" sing N N 123 G "C4'" "H4'" sing N N 124 G "O4'" "C1'" sing N N 125 G "C3'" "O3'" sing N N 126 G "C3'" "C2'" sing N N 127 G "C3'" "H3'" sing N N 128 G "O3'" "HO3'" sing N N 129 G "C2'" "O2'" sing N N 130 G "C2'" "C1'" sing N N 131 G "C2'" "H2'" sing N N 132 G "O2'" "HO2'" sing N N 133 G "C1'" N9 sing N N 134 G "C1'" "H1'" sing N N 135 G N9 C8 sing Y N 136 G N9 C4 sing Y N 137 G C8 N7 doub Y N 138 G C8 H8 sing N N 139 G N7 C5 sing Y N 140 G C5 C6 sing N N 141 G C5 C4 doub Y N 142 G C6 O6 doub N N 143 G C6 N1 sing N N 144 G N1 C2 sing N N 145 G N1 H1 sing N N 146 G C2 N2 sing N N 147 G C2 N3 doub N N 148 G N2 H21 sing N N 149 G N2 H22 sing N N 150 G N3 C4 sing N N 151 HOH O H1 sing N N 152 HOH O H2 sing N N 153 U OP3 P sing N N 154 U OP3 HOP3 sing N N 155 U P OP1 doub N N 156 U P OP2 sing N N 157 U P "O5'" sing N N 158 U OP2 HOP2 sing N N 159 U "O5'" "C5'" sing N N 160 U "C5'" "C4'" sing N N 161 U "C5'" "H5'" sing N N 162 U "C5'" "H5''" sing N N 163 U "C4'" "O4'" sing N N 164 U "C4'" "C3'" sing N N 165 U "C4'" "H4'" sing N N 166 U "O4'" "C1'" sing N N 167 U "C3'" "O3'" sing N N 168 U "C3'" "C2'" sing N N 169 U "C3'" "H3'" sing N N 170 U "O3'" "HO3'" sing N N 171 U "C2'" "O2'" sing N N 172 U "C2'" "C1'" sing N N 173 U "C2'" "H2'" sing N N 174 U "O2'" "HO2'" sing N N 175 U "C1'" N1 sing N N 176 U "C1'" "H1'" sing N N 177 U N1 C2 sing N N 178 U N1 C6 sing N N 179 U C2 O2 doub N N 180 U C2 N3 sing N N 181 U N3 C4 sing N N 182 U N3 H3 sing N N 183 U C4 O4 doub N N 184 U C4 C5 sing N N 185 U C5 C6 doub N N 186 U C5 H5 sing N N 187 U C6 H6 sing N N 188 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6R47 'double helix' 6R47 'a-form double helix' 6R47 'bulge loop' 6R47 'mismatched base pair' 6R47 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 16 1_555 0.069 -0.276 -0.197 -5.748 0.701 -10.790 1 A_G2:C17_A A 2 ? A 17 ? 19 1 1 A G 2 1_555 A C 15 1_555 -0.573 -0.188 0.280 0.808 -14.954 3.079 2 A_G3:C16_A A 3 ? A 16 ? 19 1 1 A C 3 1_555 A G 14 1_555 0.217 0.130 -0.038 6.615 -17.103 2.820 3 A_C4:G15_A A 4 ? A 15 ? 19 1 1 A C 4 1_555 A G 13 1_555 0.196 -0.043 0.206 0.644 -5.832 0.590 4 A_C5:G14_A A 5 ? A 14 ? 19 1 1 A G 5 1_555 A C 12 1_555 -0.070 -0.004 0.181 14.206 -2.223 1.550 5 A_G6:C13_A A 6 ? A 13 ? 19 1 1 A C 33 1_555 A G 11 1_555 0.438 -0.005 -0.450 21.401 -24.975 7.766 6 A_C34:G12_A A 34 ? A 12 ? 19 1 1 A C 34 1_555 A G 10 1_555 0.322 -0.227 0.459 -2.359 -7.271 1.076 7 A_C35:G11_A A 35 ? A 11 ? 19 1 1 A CBV 35 1_555 A G 9 1_555 -0.115 -0.072 -0.251 7.338 -13.965 4.071 8 A_CBV36:G10_A A 36 ? A 10 ? 19 1 1 A G 36 1_555 A C 8 1_555 -0.357 -0.347 -0.173 -0.861 -6.871 -1.842 9 A_G37:C9_A A 37 ? A 9 ? 19 1 1 A A 37 1_555 A U 7 1_555 0.291 -0.231 -0.088 -4.480 -16.922 4.031 10 A_A38:U8_A A 38 ? A 8 ? 20 1 1 A A 38 1_555 A U 6 1_555 0.077 -0.180 0.054 -12.759 -16.305 -2.128 11 A_A39:U7_A A 39 ? A 7 ? 20 1 1 A C 40 1_555 A A 32 1_555 0.085 -0.071 0.237 -0.574 -2.758 2.936 12 A_C41:A33_A A 41 ? A 33 ? 26 1 1 A G 41 1_555 B G 10 1_555 -7.192 -2.230 -0.741 5.493 -5.353 -9.032 13 A_G42:G61_B A 42 ? B 61 ? ? 3 1 A U 42 1_555 B G 9 1_555 -3.554 0.810 -0.735 13.328 -12.208 10.126 14 A_U43:G60_B A 43 ? B 60 ? ? 1 1 A G 43 1_555 B C 8 1_555 -0.417 -0.052 -0.034 -0.624 -6.567 4.208 15 A_G44:C59_B A 44 ? B 59 ? 19 1 1 A G 44 1_555 B C 7 1_555 -0.555 -0.372 -0.468 -9.217 -12.986 2.012 16 A_G45:C58_B A 45 ? B 58 ? 19 1 1 A C 45 1_555 B G 6 1_555 -0.164 -0.352 -0.085 2.716 -5.073 -0.449 17 A_C46:G57_B A 46 ? B 57 ? 19 1 1 A G 46 1_555 B C 5 1_555 -0.409 -0.267 -0.074 -12.179 -18.758 3.628 18 A_G47:C56_B A 47 ? B 56 ? 19 1 1 A U 47 1_555 B A 4 1_555 0.176 -0.040 0.319 -18.261 -22.565 5.144 19 A_U48:A55_B A 48 ? B 55 ? 20 1 1 A U 48 1_555 B A 3 1_555 -0.417 0.060 0.619 -13.915 -9.921 -0.939 20 A_U49:A54_B A 49 ? B 54 ? 20 1 1 A C 49 1_555 B G 2 1_555 0.216 0.216 0.080 7.063 -10.089 6.836 21 A_C50:G53_B A 50 ? B 53 ? 19 1 1 A C 50 1_555 B G 1 1_555 0.075 0.014 -0.533 13.071 -13.348 4.928 22 A_C51:G52_B A 51 ? B 52 ? 19 1 1 A C 25 1_555 B G 14 1_555 -0.230 -0.135 0.285 -2.865 -7.606 -4.772 23 A_C26:G65_B A 26 ? B 65 ? 19 1 1 A C 26 1_555 B G 13 1_555 0.115 -0.093 0.081 4.050 -5.164 1.154 24 A_C27:G64_B A 27 ? B 64 ? 19 1 1 A C 27 1_555 B G 12 1_555 0.520 -0.106 0.123 11.035 -12.504 2.571 25 A_C28:G63_B A 28 ? B 63 ? 19 1 1 A U 28 1_555 B U 11 1_555 2.450 -1.879 0.822 20.305 -14.526 8.222 26 A_U29:U62_B A 29 ? B 62 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 16 1_555 A G 2 1_555 A C 15 1_555 0.908 -1.838 3.034 -3.357 8.538 31.985 -4.417 -2.060 2.373 15.110 5.941 33.242 1 AA_G2G3:C16C17_AA A 2 ? A 17 ? A 3 ? A 16 ? 1 A G 2 1_555 A C 15 1_555 A C 3 1_555 A G 14 1_555 0.060 -0.996 3.260 1.362 -1.022 35.743 -1.474 0.098 3.286 -1.664 -2.217 35.782 2 AA_G3C4:G15C16_AA A 3 ? A 16 ? A 4 ? A 15 ? 1 A C 3 1_555 A G 14 1_555 A C 4 1_555 A G 13 1_555 -0.264 -2.018 3.354 -1.731 8.074 29.444 -5.347 0.175 2.728 15.505 3.324 30.555 3 AA_C4C5:G14G15_AA A 4 ? A 15 ? A 5 ? A 14 ? 1 A C 4 1_555 A G 13 1_555 A G 5 1_555 A C 12 1_555 -0.619 -1.967 2.827 2.078 10.337 26.835 -5.688 1.594 1.901 21.261 -4.275 28.797 4 AA_C5G6:C13G14_AA A 5 ? A 14 ? A 6 ? A 13 ? 1 A G 5 1_555 A C 12 1_555 A C 33 1_555 A G 11 1_555 -1.479 -0.395 3.044 5.529 2.012 49.540 -0.601 2.119 2.857 2.392 -6.571 49.866 5 AA_G6C34:G12C13_AA A 6 ? A 13 ? A 34 ? A 12 ? 1 A C 33 1_555 A G 11 1_555 A C 34 1_555 A G 10 1_555 -0.696 -2.138 3.789 -9.753 16.302 32.680 -5.530 -0.250 2.577 26.380 15.782 37.669 6 AA_C34C35:G11G12_AA A 34 ? A 12 ? A 35 ? A 11 ? 1 A C 34 1_555 A G 10 1_555 A CBV 35 1_555 A G 9 1_555 -0.453 -1.684 2.951 5.840 8.356 27.734 -4.758 1.904 2.221 16.733 -11.695 29.514 7 AA_C35CBV36:G10G11_AA A 35 ? A 11 ? A 36 ? A 10 ? 1 A CBV 35 1_555 A G 9 1_555 A G 36 1_555 A C 8 1_555 -0.322 -1.401 3.126 -4.073 25.632 31.876 -4.333 0.091 1.634 39.507 6.277 40.892 8 AA_CBV36G37:C9G10_AA A 36 ? A 10 ? A 37 ? A 9 ? 1 A G 36 1_555 A C 8 1_555 A A 37 1_555 A U 7 1_555 0.718 -1.197 3.251 0.973 16.729 37.325 -3.426 -0.931 2.528 24.674 -1.435 40.792 9 AA_G37A38:U8C9_AA A 37 ? A 9 ? A 38 ? A 8 ? 1 A A 37 1_555 A U 7 1_555 A A 38 1_555 A U 6 1_555 0.631 -2.055 3.416 3.807 7.135 29.359 -5.321 -0.453 2.904 13.752 -7.338 30.428 10 AA_A38A39:U7U8_AA A 38 ? A 8 ? A 39 ? A 7 ? 1 A A 38 1_555 A U 6 1_555 A C 40 1_555 A A 32 1_555 -0.829 -2.837 2.753 3.560 7.567 61.439 -3.032 0.935 2.377 7.369 -3.467 61.951 11 AA_A39C41:A33U7_AA A 39 ? A 7 ? A 41 ? A 33 ? 1 A C 40 1_555 A A 32 1_555 A G 41 1_555 B G 10 1_555 3.987 0.447 3.678 -3.106 0.243 43.549 0.576 -5.684 3.402 0.327 4.180 43.655 12 AA_C41G42:G61A33_BA A 41 ? A 33 ? A 42 ? B 61 ? 1 A G 41 1_555 B G 10 1_555 A U 42 1_555 B G 9 1_555 0.674 -0.929 3.181 -4.359 2.174 39.850 -1.590 -1.457 3.040 3.176 6.367 40.135 13 AA_G42U43:G60G61_BB A 42 ? B 61 ? A 43 ? B 60 ? 1 A U 42 1_555 B G 9 1_555 A G 43 1_555 B C 8 1_555 0.108 -1.563 3.963 -6.742 12.737 37.755 -3.905 -1.023 3.228 18.864 9.986 40.318 14 AA_U43G44:C59G60_BB A 43 ? B 60 ? A 44 ? B 59 ? 1 A G 43 1_555 B C 8 1_555 A G 44 1_555 B C 7 1_555 0.113 -2.062 3.624 1.847 4.864 30.010 -4.955 0.175 3.258 9.304 -3.534 30.448 15 AA_G44G45:C58C59_BB A 44 ? B 59 ? A 45 ? B 58 ? 1 A G 44 1_555 B C 7 1_555 A C 45 1_555 B G 6 1_555 -0.317 -1.466 3.067 -3.958 1.360 33.515 -2.729 -0.053 3.023 2.347 6.831 33.768 16 AA_G45C46:G57C58_BB A 45 ? B 58 ? A 46 ? B 57 ? 1 A C 45 1_555 B G 6 1_555 A G 46 1_555 B C 5 1_555 0.781 -2.085 3.584 3.133 12.164 27.784 -6.357 -0.873 2.540 23.847 -6.142 30.441 17 AA_C46G47:C56G57_BB A 46 ? B 57 ? A 47 ? B 56 ? 1 A G 46 1_555 B C 5 1_555 A U 47 1_555 B A 4 1_555 -0.022 -1.209 3.256 -1.841 9.741 37.185 -2.990 -0.184 2.859 14.952 2.827 38.439 18 AA_G47U48:A55C56_BB A 47 ? B 56 ? A 48 ? B 55 ? 1 A U 47 1_555 B A 4 1_555 A U 48 1_555 B A 3 1_555 -0.155 -1.249 3.009 -4.279 6.064 29.666 -3.435 -0.457 2.702 11.615 8.197 30.560 19 AA_U48U49:A54A55_BB A 48 ? B 55 ? A 49 ? B 54 ? 1 A U 48 1_555 B A 3 1_555 A C 49 1_555 B G 2 1_555 0.903 -2.007 2.651 4.617 -0.094 29.717 -3.854 -0.952 2.762 -0.181 -8.935 30.066 20 AA_U49C50:G53A54_BB A 49 ? B 54 ? A 50 ? B 53 ? 1 A C 49 1_555 B G 2 1_555 A C 50 1_555 B G 1 1_555 -0.306 -1.822 3.013 5.277 6.739 29.006 -4.661 1.499 2.445 13.099 -10.258 30.217 21 AA_C50C51:G52G53_BB A 50 ? B 53 ? A 51 ? B 52 ? 1 A C 25 1_555 B G 14 1_555 A C 26 1_555 B G 13 1_555 -0.446 -1.529 3.015 -2.247 2.269 32.997 -3.028 0.437 2.929 3.984 3.944 33.147 22 AA_C26C27:G64G65_BB A 26 ? B 65 ? A 27 ? B 64 ? 1 A C 26 1_555 B G 13 1_555 A C 27 1_555 B G 12 1_555 0.190 -1.461 3.172 -0.963 1.442 33.081 -2.795 -0.489 3.101 2.530 1.690 33.125 23 AA_C27C28:G63G64_BB A 27 ? B 64 ? A 28 ? B 63 ? 1 A C 27 1_555 B G 12 1_555 A U 28 1_555 B U 11 1_555 0.484 -1.402 2.962 -7.918 -2.831 39.787 -1.734 -1.495 2.907 -4.105 11.480 40.630 24 AA_C28U29:U62G63_BB A 28 ? B 63 ? A 29 ? B 62 ? # _pdbx_audit_support.funding_organization 'Cancer Research UK' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number A18604 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6R47 _atom_sites.fract_transf_matrix[1][1] 0.010603 _atom_sites.fract_transf_matrix[1][2] 0.006122 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010413 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C MG N O P # loop_