HEADER LIPID BINDING PROTEIN 17-APR-19 6RGO TITLE COMPLEX OF KLATG21 WITH COILED-COIL OF AGATG16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOPHAGY-RELATED PROTEIN 21; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: AUTOPHAGY PROTEIN 16; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS (STRAIN ATCC 8585 / CBS SOURCE 3 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); SOURCE 4 ORGANISM_COMMON: YEAST; SOURCE 5 ORGANISM_TAXID: 284590; SOURCE 6 STRAIN: ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / SOURCE 7 WM37; SOURCE 8 GENE: ATG21, KLLA0E24354G; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ASHBYA GOSSYPII (STRAIN ATCC 10895 / CBS 109.51 SOURCE 13 / FGSC 9923 / NRRL Y-1056); SOURCE 14 ORGANISM_COMMON: YEAST; SOURCE 15 ORGANISM_TAXID: 284811; SOURCE 16 STRAIN: ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056; SOURCE 17 GENE: ATG16, AFL186W; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AUTOPHAGY, YEAST, ATG16, ATG21, ATG8 LIPIDATION, LIPID BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.THUMM,P.NEUMANN REVDAT 3 24-JAN-24 6RGO 1 REMARK REVDAT 2 25-NOV-20 6RGO 1 JRNL REVDAT 1 13-MAY-20 6RGO 0 JRNL AUTH L.MUNZEL,P.NEUMANN,F.B.OTTO,R.KRICK,J.METJE-SPRINK, JRNL AUTH 2 B.KROPPEN,N.KAREDLA,J.ENDERLEIN,M.MEINECKE,R.FICNER,M.THUMM JRNL TITL ATG21 ORGANIZES ATG8 LIPIDATION AT THE CONTACT OF THE JRNL TITL 2 VACUOLE WITH THE PHAGOPHORE. JRNL REF AUTOPHAGY 1 2020 JRNL REFN ESSN 1554-8635 JRNL PMID 32515645 JRNL DOI 10.1080/15548627.2020.1766332 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 17879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.286 REMARK 3 R VALUE (WORKING SET) : 0.285 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2961 - 8.4577 0.99 2655 132 0.1876 0.2525 REMARK 3 2 8.4577 - 6.7197 0.99 2636 140 0.2633 0.3191 REMARK 3 3 6.7197 - 5.8722 1.00 2645 142 0.2967 0.3009 REMARK 3 4 5.8722 - 5.3362 1.00 2677 146 0.2961 0.2760 REMARK 3 5 5.3362 - 4.9542 1.00 2638 137 0.2777 0.2842 REMARK 3 6 4.9542 - 4.6624 0.99 2652 136 0.2799 0.2586 REMARK 3 7 4.6624 - 4.4291 1.00 2654 138 0.3074 0.3054 REMARK 3 8 4.4291 - 4.2364 1.00 2651 139 0.3435 0.3867 REMARK 3 9 4.2364 - 4.0734 1.00 2681 138 0.3815 0.3311 REMARK 3 10 4.0734 - 3.9329 1.00 2633 141 0.3954 0.4179 REMARK 3 11 3.9329 - 3.8100 1.00 2706 143 0.4001 0.4193 REMARK 3 12 3.8100 - 3.7011 1.00 2662 138 0.4322 0.3851 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.650 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5776 REMARK 3 ANGLE : 1.502 7797 REMARK 3 CHIRALITY : 0.086 934 REMARK 3 PLANARITY : 0.009 993 REMARK 3 DIHEDRAL : 11.329 3583 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 56.1311 -53.2048 -39.4254 REMARK 3 T TENSOR REMARK 3 T11: 1.3286 T22: 1.0175 REMARK 3 T33: 1.1436 T12: 0.3037 REMARK 3 T13: 0.2411 T23: 0.0841 REMARK 3 L TENSOR REMARK 3 L11: 3.7778 L22: 1.0290 REMARK 3 L33: 2.1274 L12: 0.9642 REMARK 3 L13: -0.2665 L23: -0.5480 REMARK 3 S TENSOR REMARK 3 S11: -0.3429 S12: -0.2597 S13: -0.3118 REMARK 3 S21: -0.1105 S22: 0.2798 S23: -0.0584 REMARK 3 S31: 0.0754 S32: 0.1471 S33: 0.0069 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 85.2158 -19.9839 -8.4490 REMARK 3 T TENSOR REMARK 3 T11: 1.0743 T22: 1.4450 REMARK 3 T33: 1.4381 T12: 0.2190 REMARK 3 T13: 0.0857 T23: 0.1648 REMARK 3 L TENSOR REMARK 3 L11: 2.0719 L22: 2.4576 REMARK 3 L33: 1.9863 L12: -0.3592 REMARK 3 L13: -0.6397 L23: 1.6063 REMARK 3 S TENSOR REMARK 3 S11: 0.2943 S12: 0.0973 S13: 0.3964 REMARK 3 S21: -0.0674 S22: -0.0817 S23: -0.7968 REMARK 3 S31: -0.1088 S32: 0.3384 S33: -0.0024 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 81.0582 -45.9851 -27.6161 REMARK 3 T TENSOR REMARK 3 T11: 1.1273 T22: 1.4281 REMARK 3 T33: 1.6421 T12: 0.2261 REMARK 3 T13: -0.1557 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.3470 L22: 0.7226 REMARK 3 L33: 0.7428 L12: 0.3270 REMARK 3 L13: -0.5007 L23: -0.2473 REMARK 3 S TENSOR REMARK 3 S11: -0.6381 S12: -0.7780 S13: 0.4254 REMARK 3 S21: 1.0068 S22: 0.0408 S23: -0.2883 REMARK 3 S31: 1.0394 S32: -0.5866 S33: -0.0160 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 83.8017 -37.8051 -28.0286 REMARK 3 T TENSOR REMARK 3 T11: 1.1930 T22: 1.4265 REMARK 3 T33: 1.4898 T12: 0.2501 REMARK 3 T13: 0.0279 T23: -0.2344 REMARK 3 L TENSOR REMARK 3 L11: 0.3842 L22: 0.7991 REMARK 3 L33: 0.1689 L12: 0.5253 REMARK 3 L13: -0.3124 L23: -0.4091 REMARK 3 S TENSOR REMARK 3 S11: 0.3325 S12: 0.9873 S13: 0.2064 REMARK 3 S21: 0.2022 S22: -0.5193 S23: -0.0982 REMARK 3 S31: 0.0463 S32: -0.1758 S33: 0.0020 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RGO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-APR-19. REMARK 100 THE DEPOSITION ID IS D_1292101855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17917 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.700 REMARK 200 RESOLUTION RANGE LOW (A) : 46.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : 0.23000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 14.40 REMARK 200 R MERGE FOR SHELL (I) : 1.69700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LTG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CONCETRATION 13 MG/ML, REMARK 280 CLOSTRIPAIN FOR IN SITU PROTEOLYSIS (1:2000 RATIO). RESERVOIR: REMARK 280 PROCOMPLEX (MOLECULAR DIMENSION) B11: 15 % PEG4000, 0.1 M HEPES REMARK 280 PH 7.5. DROPLET: 2 MICROL PROTEIN (MIT 1:2000 CLOSTRIPAIN) + 3 REMARK 280 MICROL RESERVOIR., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.44533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.72267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.72267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.44533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 136 REMARK 465 LYS A 137 REMARK 465 SER A 138 REMARK 465 THR A 139 REMARK 465 SER A 140 REMARK 465 LYS A 141 REMARK 465 PHE A 142 REMARK 465 ARG A 143 REMARK 465 ASN A 144 REMARK 465 SER A 145 REMARK 465 GLU A 146 REMARK 465 ALA A 147 REMARK 465 VAL A 148 REMARK 465 GLY A 149 REMARK 465 ASP A 150 REMARK 465 THR A 285 REMARK 465 THR A 286 REMARK 465 GLU A 287 REMARK 465 ALA A 288 REMARK 465 ASP A 289 REMARK 465 ALA A 290 REMARK 465 ASN A 291 REMARK 465 GLU A 292 REMARK 465 ASP A 293 REMARK 465 ASP A 294 REMARK 465 THR A 295 REMARK 465 LEU A 296 REMARK 465 GLN A 297 REMARK 465 GLN A 298 REMARK 465 SER A 299 REMARK 465 SER A 300 REMARK 465 HIS A 301 REMARK 465 SER A 302 REMARK 465 LEU A 303 REMARK 465 SER A 304 REMARK 465 SER A 305 REMARK 465 SER A 306 REMARK 465 ILE A 307 REMARK 465 ASN A 308 REMARK 465 GLY A 309 REMARK 465 LEU A 310 REMARK 465 GLN A 311 REMARK 465 TYR A 312 REMARK 465 ILE A 313 REMARK 465 SER A 314 REMARK 465 LYS A 315 REMARK 465 GLY A 316 REMARK 465 LEU A 317 REMARK 465 ALA A 318 REMARK 465 ASN A 319 REMARK 465 ARG A 320 REMARK 465 PHE A 321 REMARK 465 GLY A 322 REMARK 465 LYS A 323 REMARK 465 ILE A 324 REMARK 465 ILE A 325 REMARK 465 VAL A 326 REMARK 465 SER A 327 REMARK 465 LYS A 328 REMARK 465 ILE A 329 REMARK 465 PRO A 330 REMARK 465 THR A 331 REMARK 465 GLN A 332 REMARK 465 SER A 333 REMARK 465 GLN A 334 REMARK 465 LEU B 136 REMARK 465 LYS B 137 REMARK 465 SER B 138 REMARK 465 THR B 139 REMARK 465 SER B 140 REMARK 465 LYS B 141 REMARK 465 PHE B 142 REMARK 465 ARG B 143 REMARK 465 ASN B 144 REMARK 465 SER B 145 REMARK 465 GLU B 146 REMARK 465 ALA B 147 REMARK 465 VAL B 148 REMARK 465 GLY B 149 REMARK 465 ASP B 150 REMARK 465 THR B 285 REMARK 465 THR B 286 REMARK 465 GLU B 287 REMARK 465 ALA B 288 REMARK 465 ASP B 289 REMARK 465 ALA B 290 REMARK 465 ASN B 291 REMARK 465 GLU B 292 REMARK 465 ASP B 293 REMARK 465 ASP B 294 REMARK 465 THR B 295 REMARK 465 LEU B 296 REMARK 465 GLN B 297 REMARK 465 GLN B 298 REMARK 465 SER B 299 REMARK 465 SER B 300 REMARK 465 HIS B 301 REMARK 465 SER B 302 REMARK 465 LEU B 303 REMARK 465 SER B 304 REMARK 465 SER B 305 REMARK 465 SER B 306 REMARK 465 ILE B 307 REMARK 465 ASN B 308 REMARK 465 GLY B 309 REMARK 465 LEU B 310 REMARK 465 GLN B 311 REMARK 465 TYR B 312 REMARK 465 ILE B 313 REMARK 465 SER B 314 REMARK 465 LYS B 315 REMARK 465 GLY B 316 REMARK 465 LEU B 317 REMARK 465 ALA B 318 REMARK 465 ASN B 319 REMARK 465 ARG B 320 REMARK 465 PHE B 321 REMARK 465 GLY B 322 REMARK 465 LYS B 323 REMARK 465 ILE B 324 REMARK 465 ILE B 325 REMARK 465 VAL B 326 REMARK 465 SER B 327 REMARK 465 LYS B 328 REMARK 465 ILE B 329 REMARK 465 PRO B 330 REMARK 465 THR B 331 REMARK 465 GLN B 332 REMARK 465 SER B 333 REMARK 465 GLN B 334 REMARK 465 TRP C 108 REMARK 465 LEU C 109 REMARK 465 ALA C 110 REMARK 465 LYS C 111 REMARK 465 ALA C 112 REMARK 465 GLN C 113 REMARK 465 SER C 114 REMARK 465 GLU C 115 REMARK 465 ALA C 116 REMARK 465 ASP C 117 REMARK 465 ALA C 118 REMARK 465 MET C 119 REMARK 465 ASN C 120 REMARK 465 GLN C 121 REMARK 465 GLY C 122 REMARK 465 LEU C 123 REMARK 465 ALA C 124 REMARK 465 ILE D 105 REMARK 465 GLN D 106 REMARK 465 ARG D 107 REMARK 465 TRP D 108 REMARK 465 LEU D 109 REMARK 465 ALA D 110 REMARK 465 LYS D 111 REMARK 465 ALA D 112 REMARK 465 GLN D 113 REMARK 465 SER D 114 REMARK 465 GLU D 115 REMARK 465 ALA D 116 REMARK 465 ASP D 117 REMARK 465 ALA D 118 REMARK 465 MET D 119 REMARK 465 ASN D 120 REMARK 465 GLN D 121 REMARK 465 GLY D 122 REMARK 465 LEU D 123 REMARK 465 ALA D 124 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 34 97.79 -64.05 REMARK 500 SER A 43 -16.19 -143.09 REMARK 500 PHE A 50 -60.62 -97.27 REMARK 500 VAL A 64 -71.65 -115.46 REMARK 500 LYS A 66 -54.66 -123.64 REMARK 500 LYS A 74 54.66 -113.29 REMARK 500 ILE A 87 -63.69 -101.37 REMARK 500 LYS A 104 -32.99 -132.28 REMARK 500 LYS A 172 57.83 -96.28 REMARK 500 SER A 173 28.63 -141.18 REMARK 500 ILE A 194 -60.04 -92.87 REMARK 500 PRO A 198 -169.61 -70.95 REMARK 500 THR A 232 -61.46 -93.09 REMARK 500 VAL A 243 -62.39 -93.39 REMARK 500 VAL A 338 -64.20 -133.01 REMARK 500 GLU A 345 -71.02 -63.63 REMARK 500 SER B 43 -16.27 -143.09 REMARK 500 PHE B 50 -60.75 -97.32 REMARK 500 VAL B 64 -71.69 -115.59 REMARK 500 LYS B 66 -54.59 -123.78 REMARK 500 LYS B 74 54.83 -113.38 REMARK 500 ILE B 87 -63.68 -101.41 REMARK 500 LYS B 104 -32.91 -132.32 REMARK 500 LYS B 172 57.74 -96.21 REMARK 500 SER B 173 28.52 -141.23 REMARK 500 ILE B 194 -60.06 -92.86 REMARK 500 PRO B 198 -169.63 -75.25 REMARK 500 THR B 232 -61.50 -93.06 REMARK 500 VAL B 243 -62.42 -93.46 REMARK 500 VAL B 338 -64.19 -132.89 REMARK 500 GLU B 345 -70.84 -63.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 6RGO A 1 392 UNP Q6CLZ2 ATG21_KLULA 1 392 DBREF 6RGO B 1 392 UNP Q6CLZ2 ATG21_KLULA 1 392 DBREF 6RGO C 70 124 UNP Q755K3 ATG16_ASHGO 70 124 DBREF 6RGO D 70 124 UNP Q755K3 ATG16_ASHGO 70 124 SEQRES 1 A 392 MET ALA LEU LYS LEU LEU GLY PHE ASN GLN ASP ALA THR SEQRES 2 A 392 CYS PHE SER VAL ILE SER SER ASN LYS GLY VAL THR ILE SEQRES 3 A 392 TYR ASN CYS ASP PRO PHE GLY LYS CYS PHE GLU LEU GLU SEQRES 4 A 392 LYS SER THR SER ASN ASP GLU GLU LEU ASP PHE LEU VAL SEQRES 5 A 392 GLU MET LEU PHE SER THR SER LEU ILE ALA VAL VAL ASP SEQRES 6 A 392 LYS THR ILE GLY ALA SER LYS ARG LYS LYS LEU LYS ILE SEQRES 7 A 392 VAL ASN THR LYS ARG LYS ALA THR ILE CYS GLU LEU THR SEQRES 8 A 392 PHE PRO HIS GLU ILE MET ASP VAL ILE MET ASN ARG LYS SEQRES 9 A 392 ILE ILE CYS VAL VAL LEU LYS SER ASP GLN ILE PHE VAL SEQRES 10 A 392 TYR ASP ILE SER CYS MET LYS LEU LEU ARG THR ILE ASP SEQRES 11 A 392 VAL ARG GLY GLU LYS LEU LYS SER THR SER LYS PHE ARG SEQRES 12 A 392 ASN SER GLU ALA VAL GLY ASP ILE GLY VAL ARG VAL SER SEQRES 13 A 392 LEU SER THR ASP ASN ASN SER ILE LEU CYS TYR SER SER SEQRES 14 A 392 TYR SER LYS SER ASP LYS GLU ASN ALA PRO LEU ASN ASP SEQRES 15 A 392 ILE VAL VAL PHE ASP ALA LEU LYS CYS ILE GLN ILE ASN SEQRES 16 A 392 VAL LEU PRO ALA VAL HIS GLN SER ASN ILE VAL CYS ILE SEQRES 17 A 392 ALA CYS SER PRO ASP GLY MET LEU MET ALA THR ALA SER SEQRES 18 A 392 GLU LYS GLY THR ILE ILE ARG VAL PHE LYS THR ILE ASP SEQRES 19 A 392 THR GLU ASN ASP GLU PRO ILE LEU VAL ASN GLU PHE ARG SEQRES 20 A 392 ARG GLY SER ARG PRO SER ARG ILE SER GLU MET LYS PHE SEQRES 21 A 392 ASN HIS ASP ASN THR LEU LEU ALA CYS VAL GLY GLU SER SEQRES 22 A 392 ASP THR ILE HIS ILE PHE ALA LEU PRO VAL THR THR THR SEQRES 23 A 392 GLU ALA ASP ALA ASN GLU ASP ASP THR LEU GLN GLN SER SEQRES 24 A 392 SER HIS SER LEU SER SER SER ILE ASN GLY LEU GLN TYR SEQRES 25 A 392 ILE SER LYS GLY LEU ALA ASN ARG PHE GLY LYS ILE ILE SEQRES 26 A 392 VAL SER LYS ILE PRO THR GLN SER GLN GLN ARG HIS VAL SEQRES 27 A 392 ALA TYR ILE LYS ILE PRO GLU ASN ALA LYS TYR ARG ILE SEQRES 28 A 392 GLY PHE PRO LYS ASP THR THR ASN THR ILE HIS ILE CYS SEQRES 29 A 392 GLY GLU ASP GLY ASN TYR LEU VAL TYR SER ILE PRO ARG SEQRES 30 A 392 ASN GLU VAL GLY PRO CYS THR LEU VAL LYS SER ASN THR SEQRES 31 A 392 PHE ASP SEQRES 1 B 392 MET ALA LEU LYS LEU LEU GLY PHE ASN GLN ASP ALA THR SEQRES 2 B 392 CYS PHE SER VAL ILE SER SER ASN LYS GLY VAL THR ILE SEQRES 3 B 392 TYR ASN CYS ASP PRO PHE GLY LYS CYS PHE GLU LEU GLU SEQRES 4 B 392 LYS SER THR SER ASN ASP GLU GLU LEU ASP PHE LEU VAL SEQRES 5 B 392 GLU MET LEU PHE SER THR SER LEU ILE ALA VAL VAL ASP SEQRES 6 B 392 LYS THR ILE GLY ALA SER LYS ARG LYS LYS LEU LYS ILE SEQRES 7 B 392 VAL ASN THR LYS ARG LYS ALA THR ILE CYS GLU LEU THR SEQRES 8 B 392 PHE PRO HIS GLU ILE MET ASP VAL ILE MET ASN ARG LYS SEQRES 9 B 392 ILE ILE CYS VAL VAL LEU LYS SER ASP GLN ILE PHE VAL SEQRES 10 B 392 TYR ASP ILE SER CYS MET LYS LEU LEU ARG THR ILE ASP SEQRES 11 B 392 VAL ARG GLY GLU LYS LEU LYS SER THR SER LYS PHE ARG SEQRES 12 B 392 ASN SER GLU ALA VAL GLY ASP ILE GLY VAL ARG VAL SER SEQRES 13 B 392 LEU SER THR ASP ASN ASN SER ILE LEU CYS TYR SER SER SEQRES 14 B 392 TYR SER LYS SER ASP LYS GLU ASN ALA PRO LEU ASN ASP SEQRES 15 B 392 ILE VAL VAL PHE ASP ALA LEU LYS CYS ILE GLN ILE ASN SEQRES 16 B 392 VAL LEU PRO ALA VAL HIS GLN SER ASN ILE VAL CYS ILE SEQRES 17 B 392 ALA CYS SER PRO ASP GLY MET LEU MET ALA THR ALA SER SEQRES 18 B 392 GLU LYS GLY THR ILE ILE ARG VAL PHE LYS THR ILE ASP SEQRES 19 B 392 THR GLU ASN ASP GLU PRO ILE LEU VAL ASN GLU PHE ARG SEQRES 20 B 392 ARG GLY SER ARG PRO SER ARG ILE SER GLU MET LYS PHE SEQRES 21 B 392 ASN HIS ASP ASN THR LEU LEU ALA CYS VAL GLY GLU SER SEQRES 22 B 392 ASP THR ILE HIS ILE PHE ALA LEU PRO VAL THR THR THR SEQRES 23 B 392 GLU ALA ASP ALA ASN GLU ASP ASP THR LEU GLN GLN SER SEQRES 24 B 392 SER HIS SER LEU SER SER SER ILE ASN GLY LEU GLN TYR SEQRES 25 B 392 ILE SER LYS GLY LEU ALA ASN ARG PHE GLY LYS ILE ILE SEQRES 26 B 392 VAL SER LYS ILE PRO THR GLN SER GLN GLN ARG HIS VAL SEQRES 27 B 392 ALA TYR ILE LYS ILE PRO GLU ASN ALA LYS TYR ARG ILE SEQRES 28 B 392 GLY PHE PRO LYS ASP THR THR ASN THR ILE HIS ILE CYS SEQRES 29 B 392 GLY GLU ASP GLY ASN TYR LEU VAL TYR SER ILE PRO ARG SEQRES 30 B 392 ASN GLU VAL GLY PRO CYS THR LEU VAL LYS SER ASN THR SEQRES 31 B 392 PHE ASP SEQRES 1 C 55 SER LYS ASP ALA GLU LYS LEU ASN ASP GLU ILE ILE SER SEQRES 2 C 55 LEU ASN ILE GLU ASN SER LEU LEU GLN ASP LYS LEU THR SEQRES 3 C 55 ALA LEU GLN ALA GLU TYR ASP LYS LEU ILE GLN ARG TRP SEQRES 4 C 55 LEU ALA LYS ALA GLN SER GLU ALA ASP ALA MET ASN GLN SEQRES 5 C 55 GLY LEU ALA SEQRES 1 D 55 SER LYS ASP ALA GLU LYS LEU ASN ASP GLU ILE ILE SER SEQRES 2 D 55 LEU ASN ILE GLU ASN SER LEU LEU GLN ASP LYS LEU THR SEQRES 3 D 55 ALA LEU GLN ALA GLU TYR ASP LYS LEU ILE GLN ARG TRP SEQRES 4 D 55 LEU ALA LYS ALA GLN SER GLU ALA ASP ALA MET ASN GLN SEQRES 5 D 55 GLY LEU ALA HELIX 1 AA1 LYS C 71 ARG C 107 1 37 HELIX 2 AA2 LYS D 71 LEU D 104 1 34 SHEET 1 AA1 4 GLY A 7 PHE A 8 0 SHEET 2 AA1 4 CYS A 14 VAL A 17 -1 O SER A 16 N GLY A 7 SHEET 3 AA1 4 THR A 25 ASN A 28 -1 O THR A 25 N VAL A 17 SHEET 4 AA1 4 GLY A 33 GLU A 37 -1 O PHE A 36 N ILE A 26 SHEET 1 AA2 4 VAL A 52 MET A 54 0 SHEET 2 AA2 4 LEU A 60 VAL A 63 -1 O ALA A 62 N GLU A 53 SHEET 3 AA2 4 LEU A 76 ASN A 80 -1 O LYS A 77 N VAL A 63 SHEET 4 AA2 4 ALA A 85 LEU A 90 -1 O ILE A 87 N ILE A 78 SHEET 1 AA3 4 ILE A 96 MET A 101 0 SHEET 2 AA3 4 ILE A 105 LEU A 110 -1 O VAL A 109 N ASP A 98 SHEET 3 AA3 4 GLN A 114 ASP A 119 -1 O PHE A 116 N VAL A 108 SHEET 4 AA3 4 LEU A 125 ASP A 130 -1 O LEU A 126 N VAL A 117 SHEET 1 AA4 4 VAL A 155 LEU A 157 0 SHEET 2 AA4 4 ILE A 164 SER A 169 -1 O CYS A 166 N SER A 156 SHEET 3 AA4 4 ASP A 182 ASP A 187 -1 O ASP A 182 N SER A 169 SHEET 4 AA4 4 ILE A 192 LEU A 197 -1 O ASN A 195 N VAL A 185 SHEET 1 AA5 4 ILE A 205 CYS A 210 0 SHEET 2 AA5 4 LEU A 216 SER A 221 -1 O ALA A 220 N VAL A 206 SHEET 3 AA5 4 ILE A 227 LYS A 231 -1 O PHE A 230 N MET A 217 SHEET 4 AA5 4 LEU A 242 PHE A 246 -1 O VAL A 243 N VAL A 229 SHEET 1 AA6 4 ILE A 255 PHE A 260 0 SHEET 2 AA6 4 LEU A 266 GLY A 271 -1 O VAL A 270 N SER A 256 SHEET 3 AA6 4 THR A 275 ALA A 280 -1 O PHE A 279 N LEU A 267 SHEET 4 AA6 4 ALA A 339 LYS A 342 -1 O ILE A 341 N ILE A 276 SHEET 1 AA7 4 TYR A 349 GLY A 352 0 SHEET 2 AA7 4 THR A 360 GLY A 365 -1 O HIS A 362 N GLY A 352 SHEET 3 AA7 4 ASN A 369 SER A 374 -1 O LEU A 371 N ILE A 363 SHEET 4 AA7 4 THR A 384 THR A 390 -1 O ASN A 389 N TYR A 370 SHEET 1 AA8 4 GLY B 7 PHE B 8 0 SHEET 2 AA8 4 CYS B 14 ILE B 18 -1 O SER B 16 N GLY B 7 SHEET 3 AA8 4 VAL B 24 ASN B 28 -1 O THR B 25 N VAL B 17 SHEET 4 AA8 4 LYS B 34 GLU B 37 -1 O PHE B 36 N ILE B 26 SHEET 1 AA9 4 VAL B 52 MET B 54 0 SHEET 2 AA9 4 LEU B 60 VAL B 63 -1 O ALA B 62 N GLU B 53 SHEET 3 AA9 4 LEU B 76 ASN B 80 -1 O LYS B 77 N VAL B 63 SHEET 4 AA9 4 ALA B 85 LEU B 90 -1 O ILE B 87 N ILE B 78 SHEET 1 AB1 4 ILE B 96 MET B 101 0 SHEET 2 AB1 4 ILE B 105 LEU B 110 -1 O VAL B 109 N ASP B 98 SHEET 3 AB1 4 GLN B 114 ASP B 119 -1 O PHE B 116 N VAL B 108 SHEET 4 AB1 4 LEU B 125 ASP B 130 -1 O LEU B 126 N VAL B 117 SHEET 1 AB2 4 VAL B 155 LEU B 157 0 SHEET 2 AB2 4 ILE B 164 SER B 169 -1 O CYS B 166 N SER B 156 SHEET 3 AB2 4 ASP B 182 ASP B 187 -1 O ASP B 182 N SER B 169 SHEET 4 AB2 4 ILE B 192 LEU B 197 -1 O ASN B 195 N VAL B 185 SHEET 1 AB3 4 ILE B 205 CYS B 210 0 SHEET 2 AB3 4 LEU B 216 SER B 221 -1 O ALA B 218 N ALA B 209 SHEET 3 AB3 4 ILE B 227 LYS B 231 -1 O PHE B 230 N MET B 217 SHEET 4 AB3 4 LEU B 242 PHE B 246 -1 O VAL B 243 N VAL B 229 SHEET 1 AB4 4 ILE B 255 PHE B 260 0 SHEET 2 AB4 4 LEU B 266 GLY B 271 -1 O VAL B 270 N SER B 256 SHEET 3 AB4 4 THR B 275 ALA B 280 -1 O PHE B 279 N LEU B 267 SHEET 4 AB4 4 ALA B 339 LYS B 342 -1 O ILE B 341 N ILE B 276 SHEET 1 AB5 4 TYR B 349 GLY B 352 0 SHEET 2 AB5 4 THR B 360 GLY B 365 -1 O CYS B 364 N ARG B 350 SHEET 3 AB5 4 ASN B 369 SER B 374 -1 O TYR B 373 N ILE B 361 SHEET 4 AB5 4 THR B 384 THR B 390 -1 O ASN B 389 N TYR B 370 CISPEP 1 ASP A 30 PRO A 31 0 -24.62 CISPEP 2 ASP B 30 PRO B 31 0 -24.69 CRYST1 123.447 123.447 185.168 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008101 0.004677 0.000000 0.00000 SCALE2 0.000000 0.009354 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005401 0.00000