HEADER LIGASE 02-MAY-19 6RLU TITLE TRYPANOSOMA BRUCEI SERYL-TRNA SYNTHETASE IN COMPLEX WITH 5'-O-(N-(L- TITLE 2 SERYL)-SULFAMOYL)CYTIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERYL-TRNA SYNTHETASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SERYL-TRNA SYNTHETASE; COMPND 5 EC: 6.1.1.11; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI GAMBIENSE; SOURCE 3 ORGANISM_TAXID: 31285; SOURCE 4 GENE: TBGDAL_XI8110; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETRUK KEYWDS COIL-COIL, BETA BARREL, TRNA SYNTHETASE, INHIBITOR, COMPLEX, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR L.PANG,S.DE GRAEF,S.V.STRELKOV,S.D.WEEKS REVDAT 4 24-JAN-24 6RLU 1 LINK REVDAT 3 04-MAR-20 6RLU 1 JRNL REVDAT 2 15-JAN-20 6RLU 1 JRNL REVDAT 1 08-JAN-20 6RLU 0 JRNL AUTH L.PANG,M.NAUTIYAL,S.DE GRAEF,B.GADAKH,V.ZORZINI,A.ECONOMOU, JRNL AUTH 2 S.V.STRELKOV,A.VAN AERSCHOT,S.D.WEEKS JRNL TITL STRUCTURAL INSIGHTS INTO THE BINDING OF NATURAL JRNL TITL 2 PYRIMIDINE-BASED INHIBITORS OF CLASS II AMINOACYL-TRNA JRNL TITL 3 SYNTHETASES. JRNL REF ACS CHEM.BIOL. V. 15 407 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 31869198 JRNL DOI 10.1021/ACSCHEMBIO.9B00887 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 121020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2321 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2421 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1909 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2374 REMARK 3 BIN R VALUE (WORKING SET) : 0.1904 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.94 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 47 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7099 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 121 REMARK 3 SOLVENT ATOMS : 774 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.71580 REMARK 3 B22 (A**2) : -1.71580 REMARK 3 B33 (A**2) : 3.43150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.210 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.098 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.096 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.095 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.094 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7341 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9914 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2594 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1266 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7341 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 971 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9196 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.87 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.70 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|27 } REMARK 3 ORIGIN FOR THE GROUP (A): 24.9009 -85.4397 39.0682 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.4341 REMARK 3 T33: 0.1915 T12: -0.0892 REMARK 3 T13: -0.0235 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 3.9989 L22: 1.1689 REMARK 3 L33: 5.6144 L12: 0.6380 REMARK 3 L13: 3.0186 L23: 1.5793 REMARK 3 S TENSOR REMARK 3 S11: 0.2087 S12: -0.4895 S13: -0.3008 REMARK 3 S21: 0.0949 S22: -0.0858 S23: 0.0501 REMARK 3 S31: 0.3101 S32: -0.6686 S33: -0.1228 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|28 - A|67 } REMARK 3 ORIGIN FOR THE GROUP (A): 6.4031 -83.7689 20.3686 REMARK 3 T TENSOR REMARK 3 T11: 0.1709 T22: 0.3523 REMARK 3 T33: 0.2043 T12: 0.0059 REMARK 3 T13: -0.0281 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 4.2629 L22: 0.0584 REMARK 3 L33: 4.7581 L12: 0.9807 REMARK 3 L13: 3.8185 L23: 0.9513 REMARK 3 S TENSOR REMARK 3 S11: 0.1684 S12: -0.4906 S13: -0.3158 REMARK 3 S21: 0.0796 S22: 0.0286 S23: -0.1342 REMARK 3 S31: 0.0709 S32: -0.0878 S33: -0.1970 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|68 - A|135 } REMARK 3 ORIGIN FOR THE GROUP (A): -1.0672 -79.4987 16.2034 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.2723 REMARK 3 T33: 0.1426 T12: 0.0051 REMARK 3 T13: 0.0185 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 4.3577 L22: 0.8262 REMARK 3 L33: 2.1981 L12: 0.8349 REMARK 3 L13: 2.5570 L23: 0.4042 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: -0.4671 S13: 0.0119 REMARK 3 S21: 0.1168 S22: -0.0343 S23: -0.0329 REMARK 3 S31: -0.0859 S32: -0.1707 S33: 0.0625 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|136 - A|160 } REMARK 3 ORIGIN FOR THE GROUP (A): 42.4327 -82.0935 46.6189 REMARK 3 T TENSOR REMARK 3 T11: 0.1902 T22: 0.2385 REMARK 3 T33: 0.1416 T12: -0.0737 REMARK 3 T13: -0.0195 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.5144 L22: 0.7773 REMARK 3 L33: 2.3866 L12: 1.6877 REMARK 3 L13: 0.9993 L23: 0.3791 REMARK 3 S TENSOR REMARK 3 S11: 0.1659 S12: -0.5582 S13: -0.0367 REMARK 3 S21: 0.0526 S22: -0.1614 S23: 0.0760 REMARK 3 S31: 0.1012 S32: -0.4817 S33: -0.0045 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|161 - A|239 } REMARK 3 ORIGIN FOR THE GROUP (A): 55.8861 -65.2469 29.9863 REMARK 3 T TENSOR REMARK 3 T11: 0.1173 T22: 0.1244 REMARK 3 T33: 0.1377 T12: -0.0095 REMARK 3 T13: -0.0008 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.3562 L22: 0.3734 REMARK 3 L33: 0.6487 L12: -0.0096 REMARK 3 L13: 0.0108 L23: 0.0104 REMARK 3 S TENSOR REMARK 3 S11: 0.0325 S12: 0.0047 S13: 0.0252 REMARK 3 S21: 0.0634 S22: 0.0013 S23: 0.0110 REMARK 3 S31: -0.0047 S32: -0.0350 S33: -0.0337 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|240 - A|294 } REMARK 3 ORIGIN FOR THE GROUP (A): 40.3624 -73.9595 23.0669 REMARK 3 T TENSOR REMARK 3 T11: 0.0807 T22: 0.1609 REMARK 3 T33: 0.1206 T12: -0.0373 REMARK 3 T13: -0.0016 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.9719 L22: 1.8653 REMARK 3 L33: 1.0275 L12: 1.0032 REMARK 3 L13: 0.5096 L23: 0.2253 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: 0.0170 S13: -0.0519 REMARK 3 S21: 0.0131 S22: -0.0357 S23: 0.1606 REMARK 3 S31: 0.1168 S32: -0.2138 S33: -0.0124 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { A|295 - A|328 } REMARK 3 ORIGIN FOR THE GROUP (A): 46.6442 -71.1967 32.5984 REMARK 3 T TENSOR REMARK 3 T11: 0.1023 T22: 0.1605 REMARK 3 T33: 0.1083 T12: -0.0098 REMARK 3 T13: 0.0033 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.0240 L22: 2.6180 REMARK 3 L33: 1.1393 L12: 1.1175 REMARK 3 L13: 0.4173 L23: 0.4864 REMARK 3 S TENSOR REMARK 3 S11: 0.0971 S12: -0.0890 S13: 0.0035 REMARK 3 S21: 0.1082 S22: -0.0503 S23: 0.0741 REMARK 3 S31: 0.0373 S32: -0.1982 S33: -0.0469 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { A|329 - A|399 } REMARK 3 ORIGIN FOR THE GROUP (A): 48.9402 -79.8398 38.5596 REMARK 3 T TENSOR REMARK 3 T11: 0.1597 T22: 0.1546 REMARK 3 T33: 0.1446 T12: -0.0341 REMARK 3 T13: -0.0269 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.4649 L22: 0.1709 REMARK 3 L33: 0.9595 L12: 0.3764 REMARK 3 L13: 0.6302 L23: -0.0920 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.1533 S13: 0.0039 REMARK 3 S21: 0.0434 S22: -0.0410 S23: 0.0088 REMARK 3 S31: 0.1239 S32: -0.1663 S33: 0.0015 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: { A|400 - A|440 } REMARK 3 ORIGIN FOR THE GROUP (A): 43.6069 -81.5854 27.9816 REMARK 3 T TENSOR REMARK 3 T11: 0.1478 T22: 0.1598 REMARK 3 T33: 0.1480 T12: -0.0487 REMARK 3 T13: -0.0338 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.6362 L22: 0.9116 REMARK 3 L33: 1.2965 L12: 0.8518 REMARK 3 L13: 1.0504 L23: 0.9748 REMARK 3 S TENSOR REMARK 3 S11: 0.1625 S12: -0.1578 S13: -0.0729 REMARK 3 S21: 0.0671 S22: -0.1220 S23: 0.0165 REMARK 3 S31: 0.1802 S32: -0.2380 S33: -0.0405 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: { A|441 - A|465 } REMARK 3 ORIGIN FOR THE GROUP (A): 72.5938 -66.1668 32.7516 REMARK 3 T TENSOR REMARK 3 T11: 0.1258 T22: 0.1925 REMARK 3 T33: 0.1978 T12: -0.0160 REMARK 3 T13: -0.0405 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.7542 L22: 2.4968 REMARK 3 L33: 4.0476 L12: -0.8528 REMARK 3 L13: -0.9144 L23: 2.1136 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: -0.0444 S13: 0.1213 REMARK 3 S21: 0.1285 S22: 0.0777 S23: -0.3021 REMARK 3 S31: -0.0530 S32: 0.3896 S33: -0.1115 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: { B|1 - B|160 } REMARK 3 ORIGIN FOR THE GROUP (A): 47.8724 -20.4919 15.0560 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.2480 REMARK 3 T33: 0.2102 T12: 0.0837 REMARK 3 T13: 0.0226 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.3629 L22: 0.9783 REMARK 3 L33: 1.9787 L12: -0.5588 REMARK 3 L13: -0.7066 L23: 0.8747 REMARK 3 S TENSOR REMARK 3 S11: 0.1698 S12: 0.1478 S13: 0.0330 REMARK 3 S21: -0.1342 S22: -0.0841 S23: 0.0495 REMARK 3 S31: -0.5314 S32: -0.4131 S33: -0.0857 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: { B|161 - B|465 } REMARK 3 ORIGIN FOR THE GROUP (A): 58.4916 -57.5358 9.7686 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.1443 REMARK 3 T33: 0.1331 T12: -0.0196 REMARK 3 T13: -0.0095 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.3298 L22: 0.3555 REMARK 3 L33: 0.4675 L12: 0.0845 REMARK 3 L13: -0.0296 L23: 0.0357 REMARK 3 S TENSOR REMARK 3 S11: -0.0164 S12: 0.0444 S13: 0.0172 REMARK 3 S21: -0.0360 S22: 0.0369 S23: 0.0329 REMARK 3 S31: -0.0367 S32: -0.0079 S33: -0.0205 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RLU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.541790 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 121071 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 96.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.80 REMARK 200 R MERGE FOR SHELL (I) : 0.72200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LSQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HOLO PROTEIN AT 10 MG/ML IN 10 MM TRIS REMARK 280 PH 7, 100 MM NACL, 5 MM DTT, 5% (V/V) GLYCEROL WAS MIXED WITH REMARK 280 2.4 M SODIUM MALONATE PH 7.0, 100 MM BIS-TRIS PROPANE PH 7.0 IN REMARK 280 A 2:1 (V/V) RATIO. SUITABLE CRYSTALS WERE SOAKED WITH 2 MM 5'-O- REMARK 280 (N-(L-SERYL)-SULFAMOYL)CYTIDINE IN T CRYSTALLIZATION SOLUTION REMARK 280 CONTAINING A 22% V/V GLYCEROL., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 89.17850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.48723 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 82.22933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 89.17850 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 51.48723 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 82.22933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 89.17850 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 51.48723 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.22933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 89.17850 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 51.48723 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 82.22933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 89.17850 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 51.48723 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 82.22933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 89.17850 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 51.48723 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 82.22933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 102.97446 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 164.45867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 102.97446 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 164.45867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 102.97446 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 164.45867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 102.97446 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 164.45867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 102.97446 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 164.45867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 102.97446 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 164.45867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 255 REMARK 465 GLY A 256 REMARK 465 GLN A 413 REMARK 465 ASN A 414 REMARK 465 ASN A 466 REMARK 465 ASN A 467 REMARK 465 ALA A 468 REMARK 465 GLN A 469 REMARK 465 ALA A 470 REMARK 465 GLU A 471 REMARK 465 GLY A 472 REMARK 465 THR A 473 REMARK 465 THR A 474 REMARK 465 PRO A 475 REMARK 465 ASP A 476 REMARK 465 LYS A 477 REMARK 465 GLY A 478 REMARK 465 GLU A 479 REMARK 465 ASP B 255 REMARK 465 GLY B 256 REMARK 465 ALA B 300 REMARK 465 HIS B 301 REMARK 465 ASN B 466 REMARK 465 ASN B 467 REMARK 465 ALA B 468 REMARK 465 GLN B 469 REMARK 465 ALA B 470 REMARK 465 GLU B 471 REMARK 465 GLY B 472 REMARK 465 THR B 473 REMARK 465 THR B 474 REMARK 465 PRO B 475 REMARK 465 ASP B 476 REMARK 465 LYS B 477 REMARK 465 GLY B 478 REMARK 465 GLU B 479 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 LYS A 39 CE NZ REMARK 470 LYS A 60 CE NZ REMARK 470 LYS A 92 CD CE NZ REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 LYS A 120 CE NZ REMARK 470 GLN A 123 CD OE1 NE2 REMARK 470 GLN A 124 CG CD OE1 NE2 REMARK 470 LYS A 131 CD CE NZ REMARK 470 ASP A 149 CG OD1 OD2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 LYS A 168 CD CE NZ REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 LEU A 242 CG CD1 CD2 REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 ASP A 257 CG OD1 OD2 REMARK 470 LYS A 258 CG CD CE NZ REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 HIS A 301 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 303 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 310 CZ NH1 NH2 REMARK 470 GLU A 443 CG CD OE1 OE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 LYS B 39 CD CE NZ REMARK 470 LYS B 60 CE NZ REMARK 470 LYS B 66 CD CE NZ REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 GLU B 70 CG CD OE1 OE2 REMARK 470 ASP B 74 CG OD1 OD2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLN B 81 CD OE1 NE2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 LYS B 92 CG CD CE NZ REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 GLN B 95 CG CD OE1 NE2 REMARK 470 GLN B 98 CG CD OE1 NE2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 GLN B 123 CG CD OE1 NE2 REMARK 470 GLN B 124 CG CD OE1 NE2 REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 LYS B 168 CE NZ REMARK 470 LYS B 185 NZ REMARK 470 GLN B 241 CD OE1 NE2 REMARK 470 GLU B 247 CG CD OE1 OE2 REMARK 470 LYS B 258 CG CD CE NZ REMARK 470 GLU B 280 CD OE1 OE2 REMARK 470 LYS B 282 CD CE NZ REMARK 470 ARG B 303 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 332 CZ NH1 NH2 REMARK 470 ARG B 408 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 443 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 301 75.98 44.73 REMARK 500 THR A 392 -124.49 37.01 REMARK 500 MET A 456 58.76 -140.78 REMARK 500 VAL B 2 -63.58 -101.70 REMARK 500 THR B 392 -123.64 35.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 506 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 379 OG REMARK 620 2 HOH A 879 O 147.6 REMARK 620 3 HOH A 914 O 106.6 105.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 384 OE2 REMARK 620 2 SER A 387 OG 90.0 REMARK 620 3 FZQ A 507 O2S 88.4 91.7 REMARK 620 4 HOH A 676 O 91.0 91.4 176.9 REMARK 620 5 HOH A 898 O 178.2 89.0 90.2 90.5 REMARK 620 6 HOH A 901 O 105.6 164.2 86.0 91.2 75.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 862 O REMARK 620 2 ASN B 162 OD1 103.3 REMARK 620 3 THR B 164 OG1 174.3 76.9 REMARK 620 4 HOH B 823 O 97.6 100.2 76.8 REMARK 620 5 HOH B 861 O 73.4 92.9 112.3 165.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 506 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 384 OE2 REMARK 620 2 SER B 387 OG 93.5 REMARK 620 3 FZQ B 510 O2S 84.5 94.4 REMARK 620 4 HOH B 619 O 90.8 87.6 174.9 REMARK 620 5 HOH B 821 O 77.8 158.0 104.7 72.5 REMARK 620 6 HOH B 822 O 178.6 87.3 94.3 90.4 101.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 407 O REMARK 620 2 THR B 410 O 88.7 REMARK 620 3 GLN B 413 O 107.0 91.8 REMARK 620 4 HOH B 685 O 167.6 96.4 84.2 REMARK 620 5 HOH B 898 O 81.9 85.7 170.8 87.2 REMARK 620 6 HOH B 915 O 89.9 169.0 99.0 82.9 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 509 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 893 O REMARK 620 2 HOH B 903 O 116.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FZQ A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FZQ B 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI B 511 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6HHY RELATED DB: PDB REMARK 900 RELATED ID: 6HHZ RELATED DB: PDB REMARK 900 RELATED ID: 6HI0 RELATED DB: PDB REMARK 900 RELATED ID: 6HHV RELATED DB: PDB REMARK 900 RELATED ID: 6HHW RELATED DB: PDB REMARK 900 RELATED ID: 6HHX RELATED DB: PDB REMARK 900 RELATED ID: 6HDZ RELATED DB: PDB REMARK 900 RELATED ID: 6HE1 RELATED DB: PDB REMARK 900 RELATED ID: 6HE3 RELATED DB: PDB DBREF 6RLU A 1 479 UNP D0A7P1 D0A7P1_TRYB9 1 479 DBREF 6RLU B 1 479 UNP D0A7P1 D0A7P1_TRYB9 1 479 SEQRES 1 A 479 MET VAL LEU ASP ILE GLN LEU PHE ARG ASP GLU THR GLY SEQRES 2 A 479 ALA ASN ILE ILE ARG GLU SER GLN ARG ARG ARG PHE ALA SEQRES 3 A 479 ASP PRO ASP ILE VAL ASP ALA ILE ILE GLU ALA ASP LYS SEQRES 4 A 479 LYS TRP ARG ARG THR GLN PHE LEU THR GLU ALA SER LYS SEQRES 5 A 479 LYS LEU ILE ASN ILE CYS SER LYS ALA VAL GLY ALA LYS SEQRES 6 A 479 LYS LYS ALA LYS GLU ALA ASP GLY ASP THR SER GLU ILE SEQRES 7 A 479 PRO PRO GLN VAL LYS GLU ALA TYR GLU ASN GLY THR LEU SEQRES 8 A 479 LYS GLY GLU GLN VAL GLU GLN LEU CYS VAL LEU GLN LEU SEQRES 9 A 479 LYS GLN LEU SER LYS ASP LEU SER ASP GLN VAL ALA GLY SEQRES 10 A 479 LEU ALA LYS GLU ALA GLN GLN LEU GLU GLU GLU ARG ASP SEQRES 11 A 479 LYS LEU MET LEU ASN VAL GLY ASN ILE LEU HIS GLU SER SEQRES 12 A 479 VAL PRO ILE ALA GLN ASP GLU GLU THR GLY ASN THR VAL SEQRES 13 A 479 VAL ARG THR PHE GLY ASN THR THR LYS ARG ALA LYS LEU SEQRES 14 A 479 ASN HIS VAL SER ILE MET GLU ARG LEU GLY MET MET ASP SEQRES 15 A 479 THR SER LYS ALA VAL THR SER MET ALA GLY GLY ARG SER SEQRES 16 A 479 TYR VAL LEU LYS GLY GLY LEU VAL GLN LEU GLN VAL ALA SEQRES 17 A 479 LEU VAL SER TYR SER LEU ASP PHE LEU VAL LYS ARG GLY SEQRES 18 A 479 TYR THR PRO PHE TYR PRO PRO PHE PHE LEU ASN ARG ASP SEQRES 19 A 479 VAL MET GLY GLU VAL ALA GLN LEU SER GLN PHE ASP GLU SEQRES 20 A 479 GLU LEU TYR GLN VAL SER GLY ASP GLY ASP LYS LYS TYR SEQRES 21 A 479 LEU ILE ALA THR SER GLU MET PRO ILE ALA ALA TYR HIS SEQRES 22 A 479 ARG GLY ARG TRP PHE THR GLU LEU LYS GLU PRO LEU LYS SEQRES 23 A 479 TYR ALA GLY MET SER THR CYS PHE ARG LYS GLU ALA GLY SEQRES 24 A 479 ALA HIS GLY ARG ASP THR LEU GLY ILE PHE ARG VAL HIS SEQRES 25 A 479 GLN PHE ASP LYS ILE GLU GLN PHE VAL VAL CYS SER PRO SEQRES 26 A 479 ARG GLN GLU GLU SER TRP ARG HIS LEU GLU ASP MET ILE SEQRES 27 A 479 THR THR SER GLU GLU PHE ASN LYS SER LEU GLY LEU PRO SEQRES 28 A 479 TYR ARG VAL VAL ASN ILE CYS SER GLY ALA LEU ASN ASN SEQRES 29 A 479 ALA ALA ALA LYS LYS TYR ASP LEU GLU ALA TRP PHE PRO SEQRES 30 A 479 ALA SER GLY ALA PHE ARG GLU LEU VAL SER CYS SER ASN SEQRES 31 A 479 CYS THR ASP TYR GLN SER GLN SER VAL ASN CYS ARG TYR SEQRES 32 A 479 GLY PRO ASN LEU ARG GLY THR ALA ALA GLN ASN VAL LYS SEQRES 33 A 479 GLU TYR CYS HIS MET LEU ASN GLY THR LEU CYS ALA ILE SEQRES 34 A 479 THR ARG THR MET CYS CYS ILE CYS GLU ASN TYR GLN THR SEQRES 35 A 479 GLU GLU GLY VAL VAL ILE PRO ASP VAL LEU ARG PRO TYR SEQRES 36 A 479 MET MET GLY ILE GLU MET ILE ARG PHE GLU ASN ASN ALA SEQRES 37 A 479 GLN ALA GLU GLY THR THR PRO ASP LYS GLY GLU SEQRES 1 B 479 MET VAL LEU ASP ILE GLN LEU PHE ARG ASP GLU THR GLY SEQRES 2 B 479 ALA ASN ILE ILE ARG GLU SER GLN ARG ARG ARG PHE ALA SEQRES 3 B 479 ASP PRO ASP ILE VAL ASP ALA ILE ILE GLU ALA ASP LYS SEQRES 4 B 479 LYS TRP ARG ARG THR GLN PHE LEU THR GLU ALA SER LYS SEQRES 5 B 479 LYS LEU ILE ASN ILE CYS SER LYS ALA VAL GLY ALA LYS SEQRES 6 B 479 LYS LYS ALA LYS GLU ALA ASP GLY ASP THR SER GLU ILE SEQRES 7 B 479 PRO PRO GLN VAL LYS GLU ALA TYR GLU ASN GLY THR LEU SEQRES 8 B 479 LYS GLY GLU GLN VAL GLU GLN LEU CYS VAL LEU GLN LEU SEQRES 9 B 479 LYS GLN LEU SER LYS ASP LEU SER ASP GLN VAL ALA GLY SEQRES 10 B 479 LEU ALA LYS GLU ALA GLN GLN LEU GLU GLU GLU ARG ASP SEQRES 11 B 479 LYS LEU MET LEU ASN VAL GLY ASN ILE LEU HIS GLU SER SEQRES 12 B 479 VAL PRO ILE ALA GLN ASP GLU GLU THR GLY ASN THR VAL SEQRES 13 B 479 VAL ARG THR PHE GLY ASN THR THR LYS ARG ALA LYS LEU SEQRES 14 B 479 ASN HIS VAL SER ILE MET GLU ARG LEU GLY MET MET ASP SEQRES 15 B 479 THR SER LYS ALA VAL THR SER MET ALA GLY GLY ARG SER SEQRES 16 B 479 TYR VAL LEU LYS GLY GLY LEU VAL GLN LEU GLN VAL ALA SEQRES 17 B 479 LEU VAL SER TYR SER LEU ASP PHE LEU VAL LYS ARG GLY SEQRES 18 B 479 TYR THR PRO PHE TYR PRO PRO PHE PHE LEU ASN ARG ASP SEQRES 19 B 479 VAL MET GLY GLU VAL ALA GLN LEU SER GLN PHE ASP GLU SEQRES 20 B 479 GLU LEU TYR GLN VAL SER GLY ASP GLY ASP LYS LYS TYR SEQRES 21 B 479 LEU ILE ALA THR SER GLU MET PRO ILE ALA ALA TYR HIS SEQRES 22 B 479 ARG GLY ARG TRP PHE THR GLU LEU LYS GLU PRO LEU LYS SEQRES 23 B 479 TYR ALA GLY MET SER THR CYS PHE ARG LYS GLU ALA GLY SEQRES 24 B 479 ALA HIS GLY ARG ASP THR LEU GLY ILE PHE ARG VAL HIS SEQRES 25 B 479 GLN PHE ASP LYS ILE GLU GLN PHE VAL VAL CYS SER PRO SEQRES 26 B 479 ARG GLN GLU GLU SER TRP ARG HIS LEU GLU ASP MET ILE SEQRES 27 B 479 THR THR SER GLU GLU PHE ASN LYS SER LEU GLY LEU PRO SEQRES 28 B 479 TYR ARG VAL VAL ASN ILE CYS SER GLY ALA LEU ASN ASN SEQRES 29 B 479 ALA ALA ALA LYS LYS TYR ASP LEU GLU ALA TRP PHE PRO SEQRES 30 B 479 ALA SER GLY ALA PHE ARG GLU LEU VAL SER CYS SER ASN SEQRES 31 B 479 CYS THR ASP TYR GLN SER GLN SER VAL ASN CYS ARG TYR SEQRES 32 B 479 GLY PRO ASN LEU ARG GLY THR ALA ALA GLN ASN VAL LYS SEQRES 33 B 479 GLU TYR CYS HIS MET LEU ASN GLY THR LEU CYS ALA ILE SEQRES 34 B 479 THR ARG THR MET CYS CYS ILE CYS GLU ASN TYR GLN THR SEQRES 35 B 479 GLU GLU GLY VAL VAL ILE PRO ASP VAL LEU ARG PRO TYR SEQRES 36 B 479 MET MET GLY ILE GLU MET ILE ARG PHE GLU ASN ASN ALA SEQRES 37 B 479 GLN ALA GLU GLY THR THR PRO ASP LYS GLY GLU HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET NA A 505 1 HET NA A 506 1 HET FZQ A 507 27 HET GOL B 501 6 HET GOL B 502 6 HET GOL B 503 6 HET GOL B 504 6 HET GOL B 505 6 HET NA B 506 1 HET NA B 507 1 HET NA B 508 1 HET NA B 509 1 HET FZQ B 510 27 HET MLI B 511 7 HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM FZQ 5'-O-(N-(L-SERYL)-SULFAMOYL)CYTIDINE HETNAM MLI MALONATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 9(C3 H8 O3) FORMUL 7 NA 6(NA 1+) FORMUL 9 FZQ 2(C12 H19 N5 O9 S) FORMUL 20 MLI C3 H2 O4 2- FORMUL 21 HOH *774(H2 O) HELIX 1 AA1 ILE A 5 ASP A 10 1 6 HELIX 2 AA2 ASP A 10 ARG A 24 1 15 HELIX 3 AA3 PRO A 28 ALA A 68 1 41 HELIX 4 AA4 PRO A 79 ASN A 88 1 10 HELIX 5 AA5 LYS A 92 GLU A 97 1 6 HELIX 6 AA6 CYS A 100 LEU A 134 1 35 HELIX 7 AA7 ASP A 149 ASN A 154 1 6 HELIX 8 AA8 ASN A 170 GLY A 179 1 10 HELIX 9 AA9 SER A 184 GLY A 192 1 9 HELIX 10 AB1 GLY A 200 LYS A 219 1 20 HELIX 11 AB2 ARG A 233 ALA A 240 1 8 HELIX 12 AB3 GLN A 241 GLU A 248 1 8 HELIX 13 AB4 SER A 265 HIS A 273 1 9 HELIX 14 AB5 GLU A 328 LEU A 348 1 21 HELIX 15 AB6 ASP A 393 ASN A 400 1 8 HELIX 16 AB7 ILE A 429 GLN A 441 1 13 HELIX 17 AB8 PRO A 449 MET A 457 5 9 HELIX 18 AB9 ILE B 5 ASP B 10 1 6 HELIX 19 AC1 ASP B 10 ARG B 24 1 15 HELIX 20 AC2 PRO B 28 ALA B 68 1 41 HELIX 21 AC3 PRO B 79 ASN B 88 1 10 HELIX 22 AC4 LYS B 92 GLN B 98 1 7 HELIX 23 AC5 CYS B 100 LEU B 134 1 35 HELIX 24 AC6 ASP B 149 ASN B 154 1 6 HELIX 25 AC7 ASN B 170 LEU B 178 1 9 HELIX 26 AC8 SER B 184 GLY B 192 1 9 HELIX 27 AC9 GLY B 200 LYS B 219 1 20 HELIX 28 AD1 ARG B 233 ALA B 240 1 8 HELIX 29 AD2 GLN B 241 GLU B 248 1 8 HELIX 30 AD3 SER B 265 HIS B 273 1 9 HELIX 31 AD4 GLU B 328 GLY B 349 1 22 HELIX 32 AD5 CYS B 358 LEU B 362 5 5 HELIX 33 AD6 ASP B 393 ASN B 400 1 8 HELIX 34 AD7 ILE B 429 GLN B 441 1 13 HELIX 35 AD8 PRO B 449 MET B 456 5 8 SHEET 1 AA110 THR A 155 PHE A 160 0 SHEET 2 AA110 TYR A 352 ASN A 356 -1 O ASN A 356 N THR A 155 SHEET 3 AA110 LYS A 368 PHE A 376 -1 O GLU A 373 N ARG A 353 SHEET 4 AA110 ALA A 381 ASN A 390 -1 O CYS A 388 N TYR A 370 SHEET 5 AA110 HIS A 420 ALA A 428 -1 O ASN A 423 N SER A 389 SHEET 6 AA110 GLN A 313 CYS A 323 -1 N GLN A 319 O GLY A 424 SHEET 7 AA110 LEU A 285 PHE A 294 -1 N TYR A 287 O PHE A 320 SHEET 8 AA110 THR A 223 TYR A 226 1 N THR A 223 O LYS A 286 SHEET 9 AA110 VAL B 197 LYS B 199 -1 O LEU B 198 N TYR A 226 SHEET 10 AA110 MET B 181 ASP B 182 -1 N ASP B 182 O VAL B 197 SHEET 1 AA210 MET A 181 ASP A 182 0 SHEET 2 AA210 VAL A 197 LYS A 199 -1 O VAL A 197 N ASP A 182 SHEET 3 AA210 THR B 223 TYR B 226 -1 O TYR B 226 N LEU A 198 SHEET 4 AA210 LEU B 285 PHE B 294 1 O LYS B 286 N THR B 223 SHEET 5 AA210 GLN B 313 CYS B 323 -1 O PHE B 320 N TYR B 287 SHEET 6 AA210 HIS B 420 ALA B 428 -1 O GLY B 424 N GLN B 319 SHEET 7 AA210 ALA B 381 ASN B 390 -1 N SER B 389 O ASN B 423 SHEET 8 AA210 LYS B 368 PHE B 376 -1 N LEU B 372 O LEU B 385 SHEET 9 AA210 TYR B 352 ASN B 356 -1 N ARG B 353 O GLU B 373 SHEET 10 AA210 THR B 155 PHE B 160 -1 N VAL B 157 O VAL B 354 SHEET 1 AA3 6 PHE A 230 ASN A 232 0 SHEET 2 AA3 6 LYS A 259 LEU A 261 -1 O TYR A 260 N LEU A 231 SHEET 3 AA3 6 GLN A 251 SER A 253 -1 N VAL A 252 O LYS A 259 SHEET 4 AA3 6 GLN B 251 SER B 253 -1 O SER B 253 N GLN A 251 SHEET 5 AA3 6 LYS B 259 LEU B 261 -1 O LYS B 259 N VAL B 252 SHEET 6 AA3 6 PHE B 230 ASN B 232 -1 N LEU B 231 O TYR B 260 SHEET 1 AA4 3 TRP A 277 PHE A 278 0 SHEET 2 AA4 3 ARG A 402 TYR A 403 1 O ARG A 402 N PHE A 278 SHEET 3 AA4 3 GLU A 417 TYR A 418 -1 O GLU A 417 N TYR A 403 SHEET 1 AA5 2 GLY A 445 VAL A 447 0 SHEET 2 AA5 2 MET A 461 ARG A 463 -1 O ILE A 462 N VAL A 446 SHEET 1 AA6 3 TRP B 277 PHE B 278 0 SHEET 2 AA6 3 ARG B 402 TYR B 403 1 O ARG B 402 N PHE B 278 SHEET 3 AA6 3 GLU B 417 TYR B 418 -1 O GLU B 417 N TYR B 403 SHEET 1 AA7 2 GLY B 445 VAL B 447 0 SHEET 2 AA7 2 MET B 461 ARG B 463 -1 O ILE B 462 N VAL B 446 LINK OG SER A 379 NA NA A 506 1555 1555 3.00 LINK OE2 GLU A 384 NA NA A 505 1555 1555 2.27 LINK OG SER A 387 NA NA A 505 1555 1555 2.33 LINK NA NA A 505 O2S FZQ A 507 1555 1555 2.37 LINK NA NA A 505 O HOH A 676 1555 1555 2.37 LINK NA NA A 505 O HOH A 898 1555 1555 2.27 LINK NA NA A 505 O HOH A 901 1555 1555 2.33 LINK NA NA A 506 O HOH A 879 1555 11445 2.85 LINK NA NA A 506 O HOH A 914 1555 11445 2.47 LINK O HOH A 862 NA NA B 508 6555 1555 2.25 LINK OD1 ASN B 162 NA NA B 508 1555 1555 2.59 LINK OG1 THR B 164 NA NA B 508 1555 1555 2.40 LINK OE2 GLU B 384 NA NA B 506 1555 1555 2.25 LINK OG SER B 387 NA NA B 506 1555 1555 2.37 LINK O LEU B 407 NA NA B 507 1555 1555 2.40 LINK O THR B 410 NA NA B 507 1555 1555 2.32 LINK O GLN B 413 NA NA B 507 1555 1555 2.37 LINK NA NA B 506 O2S FZQ B 510 1555 1555 2.29 LINK NA NA B 506 O HOH B 619 1555 1555 2.39 LINK NA NA B 506 O HOH B 821 1555 1555 2.51 LINK NA NA B 506 O HOH B 822 1555 1555 2.28 LINK NA NA B 507 O HOH B 685 1555 1555 2.39 LINK NA NA B 507 O HOH B 898 1555 1555 2.47 LINK NA NA B 507 O HOH B 915 1555 1555 2.38 LINK NA NA B 508 O HOH B 823 1555 1555 2.28 LINK NA NA B 508 O HOH B 861 1555 1555 2.81 LINK NA NA B 509 O HOH B 893 1555 6555 2.70 LINK NA NA B 509 O HOH B 903 1555 6555 2.63 SITE 1 AC1 6 GLY A 137 ASN A 138 ILE A 139 GLN A 397 SITE 2 AC1 6 HOH A 602 HOH A 622 SITE 1 AC2 8 ASN A 170 SER A 173 GLU A 176 MET A 181 SITE 2 AC2 8 ASP A 182 THR A 183 SER A 184 HOH A 731 SITE 1 AC3 8 THR A 223 LEU A 285 LYS A 286 TYR A 287 SITE 2 AC3 8 HOH A 605 HOH A 610 HOH A 632 HOH A 701 SITE 1 AC4 6 TYR A 272 HIS A 273 ARG A 276 TYR A 287 SITE 2 AC4 6 HOH A 605 LYS B 199 SITE 1 AC5 6 GLU A 384 SER A 387 FZQ A 507 HOH A 676 SITE 2 AC5 6 HOH A 898 HOH A 901 SITE 1 AC6 4 ASN A 170 SER A 379 HOH A 879 HOH A 914 SITE 1 AC7 19 THR A 264 GLU A 266 ARG A 295 GLU A 297 SITE 2 AC7 19 VAL A 311 PHE A 314 GLU A 318 GLU A 384 SITE 3 AC7 19 LEU A 385 VAL A 386 SER A 387 ASN A 423 SITE 4 AC7 19 THR A 425 ALA A 428 ARG A 431 NA A 505 SITE 5 AC7 19 HOH A 654 HOH A 785 HOH A 810 SITE 1 AC8 10 THR A 164 LYS A 165 ARG A 166 TRP B 277 SITE 2 AC8 10 THR B 279 GLY B 404 ASN B 406 HOH B 632 SITE 3 AC8 10 HOH B 651 HOH B 704 SITE 1 AC9 6 GLY B 137 ASN B 138 ILE B 139 GLN B 397 SITE 2 AC9 6 HOH B 602 HOH B 624 SITE 1 AD1 9 ARG A 166 ALA A 167 HOH A 827 ARG B 276 SITE 2 AD1 9 TRP B 277 PHE B 278 GOL B 504 HOH B 668 SITE 3 AD1 9 HOH B 853 SITE 1 AD2 7 LYS A 199 TYR B 272 HIS B 273 ARG B 276 SITE 2 AD2 7 TYR B 287 GOL B 503 HOH B 681 SITE 1 AD3 7 THR B 223 LEU B 285 LYS B 286 TYR B 287 SITE 2 AD3 7 HOH B 618 HOH B 681 HOH B 716 SITE 1 AD4 6 GLU B 384 SER B 387 FZQ B 510 HOH B 619 SITE 2 AD4 6 HOH B 821 HOH B 822 SITE 1 AD5 6 LEU B 407 THR B 410 GLN B 413 HOH B 685 SITE 2 AD5 6 HOH B 898 HOH B 915 SITE 1 AD6 5 HOH A 862 ASN B 162 THR B 164 HOH B 823 SITE 2 AD6 5 HOH B 861 SITE 1 AD7 4 ASN B 170 SER B 379 HOH B 893 HOH B 903 SITE 1 AD8 19 THR B 264 GLU B 266 ARG B 295 GLU B 297 SITE 2 AD8 19 VAL B 311 PHE B 314 GLU B 318 GLU B 384 SITE 3 AD8 19 LEU B 385 VAL B 386 SER B 387 ASN B 423 SITE 4 AD8 19 THR B 425 ALA B 428 ARG B 431 NA B 506 SITE 5 AD8 19 HOH B 620 HOH B 802 HOH B 808 SITE 1 AD9 7 ARG B 402 ASN B 406 LEU B 407 ARG B 408 SITE 2 AD9 7 HOH B 706 HOH B 809 HOH B 816 CRYST1 178.357 178.357 246.688 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005607 0.003237 0.000000 0.00000 SCALE2 0.000000 0.006474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004054 0.00000