HEADER HYDROLASE 06-MAY-19 6RMA TITLE CRYSTAL STRUCTURE OF THE DEAH-BOX ATPASE PRP2 IN COMPLEX WITH SPP2 AND TITLE 2 ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MRNA SPLICING FACTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PUTATIVE PRE-MRNA SPLICING PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 3 1495; SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 GENE: CTHT_0063660; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 10 1495; SOURCE 11 ORGANISM_TAXID: 759272; SOURCE 12 GENE: CTHT_0071470; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PRP2, DEAH-BOX ATPASE, G-PATCH, SPLICEOSOME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.HAMANN,P.NEUMANN,R.FICNER REVDAT 3 15-MAY-24 6RMA 1 REMARK LINK REVDAT 2 19-FEB-20 6RMA 1 JRNL REVDAT 1 05-FEB-20 6RMA 0 JRNL AUTH F.HAMANN,A.SCHMITT,F.FAVRETTO,R.HOFELE,P.NEUMANN,S.XIANG, JRNL AUTH 2 H.URLAUB,M.ZWECKSTETTER,R.FICNER JRNL TITL STRUCTURAL ANALYSIS OF THE INTRINSICALLY DISORDERED SPLICING JRNL TITL 2 FACTOR SPP2 AND ITS BINDING TO THE DEAH-BOX ATPASE PRP2. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 2948 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 31974312 JRNL DOI 10.1073/PNAS.1907960117 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 46795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5592 - 5.3968 0.99 2792 147 0.1974 0.2055 REMARK 3 2 5.3968 - 4.2846 1.00 2694 142 0.1789 0.1566 REMARK 3 3 4.2846 - 3.7433 1.00 2650 140 0.1824 0.2432 REMARK 3 4 3.7433 - 3.4012 0.99 2638 139 0.2111 0.2057 REMARK 3 5 3.4012 - 3.1575 1.00 2622 138 0.2400 0.2602 REMARK 3 6 3.1575 - 2.9714 1.00 2621 138 0.2571 0.3490 REMARK 3 7 2.9714 - 2.8226 1.00 2629 138 0.2703 0.3049 REMARK 3 8 2.8226 - 2.6997 1.00 2599 137 0.2703 0.3298 REMARK 3 9 2.6997 - 2.5958 1.00 2619 138 0.2676 0.3168 REMARK 3 10 2.5958 - 2.5062 0.99 2578 136 0.2770 0.2678 REMARK 3 11 2.5062 - 2.4279 0.99 2597 137 0.2761 0.3261 REMARK 3 12 2.4279 - 2.3585 0.99 2575 135 0.2822 0.2998 REMARK 3 13 2.3585 - 2.2964 0.99 2555 135 0.2920 0.3426 REMARK 3 14 2.2964 - 2.2404 0.99 2565 135 0.3082 0.2945 REMARK 3 15 2.2404 - 2.1894 0.99 2565 135 0.3187 0.3625 REMARK 3 16 2.1894 - 2.1428 0.99 2584 136 0.3326 0.3598 REMARK 3 17 2.1428 - 2.1000 0.99 2570 136 0.3409 0.3455 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4132 5.3556 10.5146 REMARK 3 T TENSOR REMARK 3 T11: 0.5292 T22: 0.6501 REMARK 3 T33: 0.5365 T12: 0.0833 REMARK 3 T13: -0.0475 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.4014 L22: 1.7821 REMARK 3 L33: 1.1929 L12: 0.3651 REMARK 3 L13: -0.0283 L23: -0.1473 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: -0.2132 S13: -0.0368 REMARK 3 S21: 0.2148 S22: 0.0183 S23: -0.0770 REMARK 3 S31: 0.3676 S32: 0.0597 S33: -0.0138 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 476 THROUGH 652 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8366 2.2060 -5.7684 REMARK 3 T TENSOR REMARK 3 T11: 0.4075 T22: 0.4097 REMARK 3 T33: 0.3985 T12: -0.0928 REMARK 3 T13: -0.0335 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.9253 L22: 1.2593 REMARK 3 L33: 2.4322 L12: -0.1339 REMARK 3 L13: -0.7499 L23: 0.3322 REMARK 3 S TENSOR REMARK 3 S11: -0.0942 S12: -0.0210 S13: 0.1223 REMARK 3 S21: 0.0519 S22: 0.0093 S23: 0.2003 REMARK 3 S31: 0.3655 S32: -0.3721 S33: 0.1064 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 653 THROUGH 919 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3794 -1.0822 -23.7277 REMARK 3 T TENSOR REMARK 3 T11: 0.4290 T22: 0.4366 REMARK 3 T33: 0.4950 T12: 0.0688 REMARK 3 T13: -0.0103 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 1.0706 L22: 1.0406 REMARK 3 L33: 2.5043 L12: 0.1630 REMARK 3 L13: -0.4155 L23: 0.2266 REMARK 3 S TENSOR REMARK 3 S11: -0.0811 S12: 0.1022 S13: 0.0566 REMARK 3 S21: 0.0228 S22: 0.0388 S23: -0.0426 REMARK 3 S31: 0.3382 S32: 0.2774 S33: -0.0030 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 213 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0967 -21.6024 -13.1117 REMARK 3 T TENSOR REMARK 3 T11: 1.1655 T22: 0.6064 REMARK 3 T33: 0.6822 T12: 0.1633 REMARK 3 T13: 0.0898 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 1.4730 L22: 0.6402 REMARK 3 L33: 0.5194 L12: -0.8550 REMARK 3 L13: 0.0549 L23: 0.0385 REMARK 3 S TENSOR REMARK 3 S11: 0.1887 S12: 0.1497 S13: -0.8106 REMARK 3 S21: -0.0004 S22: -0.2519 S23: 0.5129 REMARK 3 S31: 1.0570 S32: 0.1907 S33: -0.0215 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46827 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 45.549 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.543 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.65 REMARK 200 R MERGE FOR SHELL (I) : 1.14400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CACODYLATE PH 6, 33 MM REMARK 280 KCL, 12% (V/V) ISOPROPYL ALCOHOL, 25 MM MGCL2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.33500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.37500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.63000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.37500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.33500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.63000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 262 REMARK 465 PRO A 263 REMARK 465 LEU A 264 REMARK 465 GLY A 265 REMARK 465 PRO A 887 REMARK 465 ALA A 921 REMARK 465 GLY B 208 REMARK 465 PRO B 209 REMARK 465 MET B 210 REMARK 465 VAL B 211 REMARK 465 ASP B 212 REMARK 465 ARG B 247 REMARK 465 ASN B 248 REMARK 465 VAL B 249 REMARK 465 LYS B 250 REMARK 465 GLU B 251 REMARK 465 ALA B 252 REMARK 465 GLU B 253 REMARK 465 ASP B 254 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 387 CG CD OE1 OE2 REMARK 470 GLU A 791 CG CD OE1 OE2 REMARK 470 LYS A 869 CG CD CE NZ REMARK 470 LYS B 231 CG CD CE NZ REMARK 470 LYS B 233 CG CD CE NZ REMARK 470 GLU B 234 CG CD OE1 OE2 REMARK 470 LYS B 236 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 282 CD REMARK 480 GLU A 284 CD REMARK 480 GLU A 292 CD REMARK 480 GLU A 456 CD REMARK 480 GLU A 517 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 373 -113.02 -99.62 REMARK 500 PHE A 381 -6.41 64.79 REMARK 500 PHE A 462 35.55 -98.74 REMARK 500 THR A 577 -16.30 -144.51 REMARK 500 LEU A 637 48.74 -87.54 REMARK 500 ARG A 756 89.37 -150.79 REMARK 500 THR A 900 -153.66 -93.20 REMARK 500 SER A 907 77.87 63.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1288 DISTANCE = 6.41 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 327 OG1 REMARK 620 2 ADP A1002 O2B 97.7 REMARK 620 3 HOH A1118 O 84.9 95.3 REMARK 620 4 HOH A1119 O 100.1 107.7 155.4 REMARK 620 5 HOH A1151 O 157.6 95.9 76.2 92.5 REMARK 620 6 HOH A1159 O 90.6 171.7 85.2 70.7 76.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1005 DBREF 6RMA A 270 921 UNP G0SEG4 G0SEG4_CHATD 270 921 DBREF 6RMA B 211 254 UNP G0SFN3 G0SFN3_CHATD 211 254 SEQADV 6RMA GLY A 262 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA PRO A 263 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA LEU A 264 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA GLY A 265 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA SER A 266 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA PRO A 267 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA GLU A 268 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA PHE A 269 UNP G0SEG4 EXPRESSION TAG SEQADV 6RMA GLY B 208 UNP G0SFN3 EXPRESSION TAG SEQADV 6RMA PRO B 209 UNP G0SFN3 EXPRESSION TAG SEQADV 6RMA MET B 210 UNP G0SFN3 EXPRESSION TAG SEQRES 1 A 660 GLY PRO LEU GLY SER PRO GLU PHE THR PRO GLU GLN ARG SEQRES 2 A 660 LEU LEU LYS GLN LYS ILE GLU GLU ALA GLU ARG ALA GLN SEQRES 3 A 660 ARG THR ILE GLN GLU VAL ARG LYS SER LEU PRO VAL TYR SEQRES 4 A 660 ALA TYR ARG ASP ALA PHE LEU ASP ALA VAL LYS GLU TYR SEQRES 5 A 660 GLN VAL LEU ILE LEU VAL GLY GLU THR GLY SER GLY LYS SEQRES 6 A 660 THR THR GLN ILE PRO GLN TYR LEU HIS GLU ALA GLY TYR SEQRES 7 A 660 THR LYS GLY ASN ARG LYS ILE ALA CYS THR GLN PRO ARG SEQRES 8 A 660 ARG VAL ALA ALA MET SER VAL ALA ALA ARG VAL ALA ASP SEQRES 9 A 660 GLU MET GLY VAL ARG LEU GLY HIS GLU VAL GLY TYR SER SEQRES 10 A 660 ILE ARG PHE GLU ASP CYS THR SER GLU LYS THR ILE LEU SEQRES 11 A 660 LYS TYR MET THR ASP GLY MET LEU LEU ARG GLU MET VAL SEQRES 12 A 660 THR SER PRO ASP LEU ALA ASP TYR SER CYS ILE MET ILE SEQRES 13 A 660 ASP GLU ALA HIS GLU ARG THR VAL HIS THR ASP ILE LEU SEQRES 14 A 660 LEU ALA LEU ILE LYS ASP LEU THR ARG ALA ARG PRO GLU SEQRES 15 A 660 LEU ARG LEU ILE ILE SER SER ALA THR LEU ASN ALA GLU SEQRES 16 A 660 LYS PHE SER ALA TYR PHE ASP ASP ALA PRO ILE PHE ASN SEQRES 17 A 660 VAL PRO GLY ARG VAL HIS PRO VAL GLU VAL TYR TYR THR SEQRES 18 A 660 SER ALA PRO GLU SER ASN TYR LEU GLU ALA ALA LEU VAL SEQRES 19 A 660 THR VAL PHE GLN ILE HIS ALA THR GLN PRO GLU GLY ASP SEQRES 20 A 660 ILE LEU VAL PHE LEU THR GLY GLN GLU GLU ILE GLU ARG SEQRES 21 A 660 ALA CYS GLU ARG VAL GLU GLU ILE ARG ARG LYS LEU GLY SEQRES 22 A 660 LYS ARG VAL PRO GLU ILE ILE ALA LEU PRO ILE TYR SER SEQRES 23 A 660 ASN MET PRO SER GLU MET GLN ALA LYS ILE PHE GLU PRO SEQRES 24 A 660 THR PRO PRO GLY ALA ARG LYS VAL VAL PHE SER THR ASN SEQRES 25 A 660 ILE ALA GLU THR SER LEU THR ILE ASP GLY ILE VAL TYR SEQRES 26 A 660 VAL ILE ASP SER GLY TYR VAL LYS GLU ASN THR PHE SER SEQRES 27 A 660 PRO VAL GLY THR THR GLY GLN SER THR LEU ALA VAL VAL SEQRES 28 A 660 PRO CYS SER ARG ALA ALA ALA ASN GLN ARG MET GLY ARG SEQRES 29 A 660 ALA GLY ARG VAL LYS PRO GLY LYS CYS PHE ARG LEU TYR SEQRES 30 A 660 THR LYS TYR ALA TYR LEU SER GLU MET ASP GLU SER PRO SEQRES 31 A 660 THR PRO GLU ILE GLN ARG THR SER LEU SER SER VAL VAL SEQRES 32 A 660 LEU GLN LEU LYS ALA LEU GLY ILE ASP ASP LEU LEU GLY SEQRES 33 A 660 PHE ASP PHE LEU ASP PRO PRO PRO THR GLU LEU LEU ILE SEQRES 34 A 660 LYS SER LEU ASN MET LEU TYR ALA LEU GLY ALA LEU ASN SEQRES 35 A 660 SER ALA GLY GLN LEU THR ARG VAL GLY ARG GLN MET GLY SEQRES 36 A 660 GLU PHE PRO THR GLU PRO MET LEU ALA LYS ALA LEU ILE SEQRES 37 A 660 ALA ALA THR GLN GLU GLY CYS VAL SER GLU VAL LEU THR SEQRES 38 A 660 ILE VAL SER MET LEU GLY GLU VAL GLY THR LEU PHE PHE SEQRES 39 A 660 ARG PRO LYS ASP LYS LYS VAL HIS ALA ASP SER ALA ARG SEQRES 40 A 660 ALA ARG PHE THR VAL ARG ASP GLY GLY ASP HIS LEU THR SEQRES 41 A 660 LEU LEU ASN ILE TYR ASN GLN TRP VAL GLU ALA GLU TYR SEQRES 42 A 660 SER PRO ILE TRP ALA ARG GLU ASN PHE LEU ALA GLN ARG SEQRES 43 A 660 SER LEU THR ARG ALA ARG ASP VAL ARG ASP GLN LEU ALA SEQRES 44 A 660 LYS LEU CYS ASP ARG ILE LEU ASP GLY SER GLU ALA SER SEQRES 45 A 660 CYS GLY GLY VAL ASN ASN PRO THR PRO ILE LEU ARG ALA SEQRES 46 A 660 LEU THR ALA ALA PHE PHE LEU ASN ALA ALA ARG LEU ASN SEQRES 47 A 660 ARG ALA GLY ASP GLY TYR ARG THR LEU LYS ASN ASN ILE SEQRES 48 A 660 THR VAL TYR VAL HIS PRO SER SER VAL VAL ARG GLY MET SEQRES 49 A 660 ASP PRO PRO PRO LYS VAL ILE ILE TYR HIS GLU LEU VAL SEQRES 50 A 660 VAL THR SER LYS GLU TYR VAL ARG SER VAL ILE PRO VAL SEQRES 51 A 660 GLU PRO ARG TRP LEU SER GLU PHE GLY ALA SEQRES 1 B 47 GLY PRO MET VAL ASP ASP PHE GLY GLU ASN LEU LEU ARG SEQRES 2 B 47 SER PHE GLY TRP ASP GLY LYS MET ARG GLY LYS VAL LYS SEQRES 3 B 47 GLU VAL LYS ARG TYR ALA ASN LEU ALA GLY LEU GLY ALA SEQRES 4 B 47 ARG ASN VAL LYS GLU ALA GLU ASP HET CL A1001 1 HET ADP A1002 27 HET MG A1003 1 HET IPA A1004 4 HET GOL A1005 6 HETNAM CL CHLORIDE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM IPA ISOPROPYL ALCOHOL HETNAM GOL GLYCEROL HETSYN IPA 2-PROPANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL CL 1- FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 MG MG 2+ FORMUL 6 IPA C3 H8 O FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *192(H2 O) HELIX 1 AA1 GLU A 272 SER A 296 1 25 HELIX 2 AA2 VAL A 299 ALA A 301 5 3 HELIX 3 AA3 TYR A 302 TYR A 313 1 12 HELIX 4 AA4 GLY A 325 ALA A 337 1 13 HELIX 5 AA5 ARG A 352 MET A 367 1 16 HELIX 6 AA6 ASP A 396 SER A 406 1 11 HELIX 7 AA7 ALA A 420 ARG A 423 5 4 HELIX 8 AA8 THR A 424 ARG A 441 1 18 HELIX 9 AA9 ALA A 455 PHE A 462 1 8 HELIX 10 AB1 ASN A 488 GLN A 504 1 17 HELIX 11 AB2 GLY A 515 GLY A 534 1 20 HELIX 12 AB3 LYS A 535 VAL A 537 5 3 HELIX 13 AB4 PRO A 550 PHE A 558 1 9 HELIX 14 AB5 ASN A 573 SER A 578 1 6 HELIX 15 AB6 SER A 615 ARG A 625 1 11 HELIX 16 AB7 ALA A 626 ARG A 628 5 3 HELIX 17 AB8 THR A 639 GLU A 646 1 8 HELIX 18 AB9 PRO A 653 ARG A 657 5 5 HELIX 19 AC1 LEU A 660 LEU A 670 1 11 HELIX 20 AC2 PRO A 685 LEU A 699 1 15 HELIX 21 AC3 THR A 709 GLU A 717 1 9 HELIX 22 AC4 GLU A 721 GLY A 735 1 15 HELIX 23 AC5 CYS A 736 LEU A 747 1 12 HELIX 24 AC6 GLY A 748 VAL A 750 5 3 HELIX 25 AC7 LYS A 760 ARG A 770 1 11 HELIX 26 AC8 GLY A 776 ALA A 792 1 17 HELIX 27 AC9 SER A 795 ASN A 802 1 8 HELIX 28 AD1 ALA A 805 ILE A 826 1 22 HELIX 29 AD2 PRO A 840 PHE A 852 1 13 HELIX 30 AD3 SER A 880 MET A 885 5 6 HELIX 31 AD4 GLU A 912 GLY A 920 1 9 HELIX 32 AD5 PHE B 214 SER B 221 1 8 SHEET 1 AA1 8 GLU A 382 CYS A 384 0 SHEET 2 AA1 8 VAL A 375 ILE A 379 -1 N ILE A 379 O GLU A 382 SHEET 3 AA1 8 LEU A 391 THR A 395 1 O LEU A 391 N GLY A 376 SHEET 4 AA1 8 LYS A 345 GLN A 350 1 N ILE A 346 O LYS A 392 SHEET 5 AA1 8 TYR A 412 ASP A 418 1 O MET A 416 N ALA A 347 SHEET 6 AA1 8 ARG A 445 SER A 450 1 O ARG A 445 N ILE A 415 SHEET 7 AA1 8 VAL A 315 GLY A 320 1 N LEU A 316 O ILE A 448 SHEET 8 AA1 8 ILE A 467 VAL A 470 1 O PHE A 468 N ILE A 317 SHEET 1 AA2 6 VAL A 477 TYR A 480 0 SHEET 2 AA2 6 GLY A 632 ARG A 636 1 O CYS A 634 N TYR A 480 SHEET 3 AA2 6 ILE A 584 ASP A 589 1 N VAL A 587 O PHE A 635 SHEET 4 AA2 6 ASP A 508 PHE A 512 1 N PHE A 512 O ILE A 588 SHEET 5 AA2 6 ARG A 566 SER A 571 1 O VAL A 569 N VAL A 511 SHEET 6 AA2 6 ILE A 540 ILE A 545 1 N ILE A 541 O VAL A 568 SHEET 1 AA3 8 TYR A 592 SER A 599 0 SHEET 2 AA3 8 GLN A 606 PRO A 613 -1 O VAL A 612 N VAL A 593 SHEET 3 AA3 8 VAL A 891 VAL A 899 1 O LEU A 897 N LEU A 609 SHEET 4 AA3 8 GLU A 903 PRO A 910 -1 O TYR A 904 N VAL A 898 SHEET 5 AA3 8 THR A 873 VAL A 876 1 N TYR A 875 O VAL A 905 SHEET 6 AA3 8 TYR A 865 THR A 867 -1 N TYR A 865 O VAL A 874 SHEET 7 AA3 8 ALA A 855 LEU A 858 -1 N ARG A 857 O ARG A 866 SHEET 8 AA3 8 VAL A 891 VAL A 899 -1 O ILE A 892 N ALA A 856 LINK OG1 THR A 327 MG MG A1003 1555 1555 1.98 LINK O2B ADP A1002 MG MG A1003 1555 1555 2.02 LINK MG MG A1003 O HOH A1118 1555 1555 2.05 LINK MG MG A1003 O HOH A1119 1555 1555 2.06 LINK MG MG A1003 O HOH A1151 1555 1555 2.06 LINK MG MG A1003 O HOH A1159 1555 1555 2.09 SITE 1 AC1 4 ARG A 353 VAL A 354 SER A 547 ILE A 574 SITE 1 AC2 20 GLU A 321 THR A 322 GLY A 323 SER A 324 SITE 2 AC2 20 GLY A 325 LYS A 326 THR A 327 THR A 328 SITE 3 AC2 20 SER A 358 ARG A 362 PHE A 558 THR A 580 SITE 4 AC2 20 ASP A 582 MG A1003 HOH A1118 HOH A1119 SITE 5 AC2 20 HOH A1139 HOH A1151 HOH A1161 HOH A1221 SITE 1 AC3 6 THR A 327 ADP A1002 HOH A1118 HOH A1119 SITE 2 AC3 6 HOH A1151 HOH A1159 SITE 1 AC4 3 ALA A 337 GLY A 338 ARG A 845 SITE 1 AC5 8 ALA A 610 VAL A 611 VAL A 899 THR A 900 SITE 2 AC5 8 HOH A1194 TYR B 238 ALA B 239 ASN B 240 CRYST1 66.670 95.260 124.750 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014999 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008016 0.00000