HEADER HYDROLASE 07-MAY-19 6RN1 TITLE STRUCTURE OF N-TERMINAL TRUNCATED PLASMODIUM FALCIPARUM IMP- TITLE 2 NUCLEOTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMP-SPECIFIC 5'-NUCLEOTIDASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.5; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: FIRST 59 RESIDUES ARE TRUNCATED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 GENE: PF3D7_1206100; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDASE, HYDROLASE, TRUNCATION EXPDTA X-RAY DIFFRACTION AUTHOR L.CARRIQUE,L.BALLUT,S.VIOLOT,N.AGHAJARI REVDAT 2 24-JAN-24 6RN1 1 REMARK REVDAT 1 15-JUL-20 6RN1 0 JRNL AUTH L.CARRIQUE,L.BALLUT,A.SHUKLA,N.VARMA,R.RAVI,S.VIOLOT, JRNL AUTH 2 B.SRINIVASAN,U.T.GANESHAPPA,S.KULKARNI,H.BALARAM,N.AGHAJARI JRNL TITL STRUCTURE AND CATALYTIC REGULATION OF PLASMODIUM FALCIPARUM JRNL TITL 2 IMP SPECIFIC NUCLEOTIDASE. JRNL REF NAT COMMUN V. 11 3228 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32591529 JRNL DOI 10.1038/S41467-020-17013-X REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.16_3549: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 900 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5700 - 5.4419 1.00 3002 159 0.2382 0.2560 REMARK 3 2 5.4419 - 4.3238 1.00 2869 151 0.2344 0.2828 REMARK 3 3 4.3238 - 3.7785 1.00 2822 149 0.2459 0.2695 REMARK 3 4 3.7785 - 3.4336 1.00 2808 148 0.2721 0.2876 REMARK 3 5 3.4336 - 3.1878 1.00 2795 147 0.3143 0.3420 REMARK 3 6 3.1878 - 3.0000 1.00 2781 146 0.3124 0.3662 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 88.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5244 REMARK 3 ANGLE : 0.497 7176 REMARK 3 CHIRALITY : 0.040 866 REMARK 3 PLANARITY : 0.003 920 REMARK 3 DIHEDRAL : 2.134 3081 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RN1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102225. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.967 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18036 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 27.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6RMD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.06M CITRIC ACID, 0.04M BIS-TRIS REMARK 280 PROPANE PH 4.1 AND 16% PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 70.33000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.49000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.33000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 70.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.49000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.33000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.33000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.49000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 70.33000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.33000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.49000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 178 REMARK 465 GLY A 179 REMARK 465 LYS A 315 REMARK 465 ILE A 316 REMARK 465 PRO A 317 REMARK 465 SER A 318 REMARK 465 LEU A 319 REMARK 465 ASN A 320 REMARK 465 ILE A 321 REMARK 465 LYS A 322 REMARK 465 ASN A 323 REMARK 465 GLU A 324 REMARK 465 GLN A 325 REMARK 465 LYS A 326 REMARK 465 ILE A 432 REMARK 465 LYS A 433 REMARK 465 SER A 434 REMARK 465 PHE A 435 REMARK 465 ILE A 436 REMARK 465 PRO A 437 REMARK 465 GLU A 438 REMARK 465 VAL A 439 REMARK 465 LEU A 440 REMARK 465 TYR A 441 REMARK 465 GLU A 442 REMARK 465 ASN A 443 REMARK 465 GLN A 444 REMARK 465 HIS B 180 REMARK 465 ASP B 181 REMARK 465 PHE B 182 REMARK 465 LYS B 232 REMARK 465 ASP B 233 REMARK 465 GLY B 234 REMARK 465 SER B 235 REMARK 465 LEU B 319 REMARK 465 ASN B 320 REMARK 465 ILE B 321 REMARK 465 LYS B 322 REMARK 465 ASN B 323 REMARK 465 GLU B 324 REMARK 465 PHE B 396 REMARK 465 LEU B 397 REMARK 465 HIS B 398 REMARK 465 SER B 399 REMARK 465 GLY B 400 REMARK 465 ASN B 401 REMARK 465 ASP B 402 REMARK 465 PHE B 403 REMARK 465 PRO B 404 REMARK 465 THR B 405 REMARK 465 LEU B 430 REMARK 465 ASN B 431 REMARK 465 ILE B 432 REMARK 465 LYS B 433 REMARK 465 SER B 434 REMARK 465 PHE B 435 REMARK 465 ILE B 436 REMARK 465 PRO B 437 REMARK 465 GLU B 438 REMARK 465 VAL B 439 REMARK 465 LEU B 440 REMARK 465 TYR B 441 REMARK 465 GLU B 442 REMARK 465 ASN B 443 REMARK 465 GLN B 444 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 ASP A 96 CG OD1 OD2 REMARK 470 GLN A 102 CG CD OE1 NE2 REMARK 470 LYS A 107 CD CE NZ REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 ARG A 134 CD NE CZ NH1 NH2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 ASP A 172 CG OD1 OD2 REMARK 470 HIS A 180 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 181 CG OD1 OD2 REMARK 470 ASN A 183 CG OD1 ND2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 ILE A 191 CD1 REMARK 470 SER A 192 OG REMARK 470 CYS A 193 SG REMARK 470 LEU A 194 CD1 CD2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 GLN A 216 CG CD OE1 NE2 REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 ARG A 218 CD NE CZ NH1 NH2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LEU A 222 CG CD1 CD2 REMARK 470 LEU A 223 CG CD1 CD2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 PHE A 226 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 227 OG REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 ASN A 230 CG OD1 ND2 REMARK 470 ILE A 231 CG1 CG2 CD1 REMARK 470 LYS A 232 CG CD CE NZ REMARK 470 TYR A 236 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 ASN A 238 CG OD1 ND2 REMARK 470 LYS A 251 CE NZ REMARK 470 GLU A 254 CG CD OE1 OE2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 LEU A 258 CG CD1 CD2 REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 268 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 PHE A 272 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 286 CG CD OE1 OE2 REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 GLU A 290 CG CD OE1 OE2 REMARK 470 LYS A 291 CE NZ REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 CYS A 299 SG REMARK 470 LYS A 305 CG CD CE NZ REMARK 470 GLU A 306 CG CD OE1 OE2 REMARK 470 ASN A 327 CG OD1 ND2 REMARK 470 TYR A 328 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 329 CG SD CE REMARK 470 LYS A 331 CG CD CE NZ REMARK 470 LYS A 343 CG CD CE NZ REMARK 470 LYS A 344 CD CE NZ REMARK 470 GLU A 345 CG CD OE1 OE2 REMARK 470 LYS A 348 CG CD CE NZ REMARK 470 LYS A 350 CD CE NZ REMARK 470 PHE A 358 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 362 CG CD OE1 NE2 REMARK 470 LYS A 371 CG CD CE NZ REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 LYS A 380 CG CD CE NZ REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 ILE A 384 CG1 CG2 CD1 REMARK 470 GLN A 385 OE1 NE2 REMARK 470 LYS A 387 CG CD CE NZ REMARK 470 LYS A 388 CG CD CE NZ REMARK 470 ASP A 394 CG OD1 OD2 REMARK 470 GLN A 395 CG CD OE1 NE2 REMARK 470 LEU A 397 CG CD1 CD2 REMARK 470 HIS A 398 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 406 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 425 CG CD CE NZ REMARK 470 ILE A 427 CG1 CG2 CD1 REMARK 470 LEU A 430 CG CD1 CD2 REMARK 470 ASP B 60 CG OD1 OD2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 GLN B 102 CD OE1 NE2 REMARK 470 VAL B 113 CG1 CG2 REMARK 470 ILE B 115 CG1 CG2 CD1 REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 124 CD CE NZ REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 LYS B 132 CD CE NZ REMARK 470 LYS B 137 CE NZ REMARK 470 LEU B 139 CD1 CD2 REMARK 470 GLU B 162 CG CD OE1 OE2 REMARK 470 ASP B 172 CG OD1 OD2 REMARK 470 TYR B 176 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 470 TYR B 190 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 194 CG CD1 CD2 REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 LYS B 197 CG CD CE NZ REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 470 LYS B 214 CG CD CE NZ REMARK 470 GLN B 216 CG CD OE1 NE2 REMARK 470 LYS B 217 CG CD CE NZ REMARK 470 ARG B 218 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 219 CG CD1 CD2 REMARK 470 GLU B 220 CG CD OE1 OE2 REMARK 470 LEU B 222 CG CD1 CD2 REMARK 470 LEU B 223 CG CD1 CD2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 PHE B 226 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 228 CG CD CE NZ REMARK 470 HIS B 229 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 230 CG OD1 ND2 REMARK 470 TYR B 236 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 LYS B 251 CE NZ REMARK 470 ASN B 253 CG OD1 ND2 REMARK 470 GLU B 254 CG CD OE1 OE2 REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 LEU B 258 CG CD1 CD2 REMARK 470 GLU B 263 CG CD OE1 OE2 REMARK 470 ASN B 264 CG OD1 ND2 REMARK 470 GLU B 265 CG CD OE1 OE2 REMARK 470 ARG B 267 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 268 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 271 CG CD CE NZ REMARK 470 PHE B 272 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP B 274 CG OD1 OD2 REMARK 470 LYS B 287 CD CE NZ REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 LYS B 294 CG CD CE NZ REMARK 470 ASP B 295 CG OD1 OD2 REMARK 470 LEU B 298 CG CD1 CD2 REMARK 470 CYS B 299 SG REMARK 470 GLN B 301 CG CD OE1 NE2 REMARK 470 LYS B 305 CE NZ REMARK 470 GLU B 306 CG CD OE1 OE2 REMARK 470 LYS B 315 CG CD CE NZ REMARK 470 ILE B 316 CG1 CG2 CD1 REMARK 470 GLN B 325 CG CD OE1 NE2 REMARK 470 LYS B 326 CG CD CE NZ REMARK 470 ASN B 327 CG OD1 ND2 REMARK 470 TYR B 328 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET B 329 CG SD CE REMARK 470 GLU B 333 CG CD OE1 OE2 REMARK 470 GLU B 336 CG CD OE1 OE2 REMARK 470 LYS B 343 CG CD CE NZ REMARK 470 LYS B 344 CD CE NZ REMARK 470 LYS B 348 CG CD CE NZ REMARK 470 PHE B 358 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 362 CG CD OE1 NE2 REMARK 470 LYS B 371 CD CE NZ REMARK 470 LYS B 380 CG CD CE NZ REMARK 470 LYS B 383 CG CD CE NZ REMARK 470 GLN B 385 CG CD OE1 NE2 REMARK 470 LYS B 386 CG CD CE NZ REMARK 470 LYS B 387 CD CE NZ REMARK 470 LYS B 388 CG CD CE NZ REMARK 470 ASP B 394 CG OD1 OD2 REMARK 470 GLN B 395 CG CD OE1 NE2 REMARK 470 GLN B 418 CG CD OE1 NE2 REMARK 470 LYS B 421 CG CD CE NZ REMARK 470 LEU B 424 CG CD1 CD2 REMARK 470 LYS B 425 CG CD CE NZ REMARK 470 MET B 428 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS A 299 ND2 ASN A 314 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 112 38.60 -97.12 REMARK 500 LEU A 160 35.99 -89.70 REMARK 500 GLU A 173 -14.19 -152.00 REMARK 500 ASN A 183 49.38 -157.69 REMARK 500 ASN A 209 75.31 -66.48 REMARK 500 ASN A 238 48.51 -94.23 REMARK 500 GLU A 245 -53.31 66.91 REMARK 500 SER A 246 40.15 -156.01 REMARK 500 LYS B 81 -156.04 -82.80 REMARK 500 ASP B 112 32.81 -92.45 REMARK 500 LEU B 160 49.21 -83.41 REMARK 500 GLU B 173 -18.86 -145.75 REMARK 500 ASP B 178 -148.36 -119.12 REMARK 500 ASN B 209 -125.67 59.05 REMARK 500 ASP B 211 92.31 -68.22 REMARK 500 LEU B 219 59.84 -147.13 REMARK 500 HIS B 229 12.54 49.85 REMARK 500 ASN B 230 -103.19 -104.13 REMARK 500 GLU B 245 -62.33 63.55 REMARK 500 SER B 246 27.46 -142.40 REMARK 500 ASN B 253 -125.01 -86.33 REMARK 500 LEU B 258 76.76 -168.08 REMARK 500 TRP B 266 12.92 -144.69 REMARK 500 SER B 415 -3.48 -143.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 513 DISTANCE = 9.15 ANGSTROMS REMARK 525 HOH B 522 DISTANCE = 6.60 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6RMD RELATED DB: PDB REMARK 900 ATP BOUND PLASMODIUM FALCIPARUM IMP-NUCLEOTIDASE REMARK 900 RELATED ID: 6RME RELATED DB: PDB REMARK 900 IMP BOUND PLASMODIUM FALCIPARUM IMP-NUCLEOTIDASE REMARK 900 RELATED ID: 6RMO RELATED DB: PDB REMARK 900 NATIVE PLASMODIUM FALCIPARUM IMP-NUCLEOTIDASE REMARK 900 RELATED ID: 6RMW RELATED DB: PDB REMARK 900 N-TERMINAL TRUNCATED (30 RESIDUES) IMP BOUND PLASMODIUM FALCIPARUM REMARK 900 IMP-NUCLEOTIDASE REMARK 900 RELATED ID: 6RNH RELATED DB: PDB REMARK 900 C-TERMINAL TRUNCATED (10 RESIDUES) PLASMODIUM FALCIPARUM IMP- REMARK 900 NUCLEOTIDASE DBREF1 6RN1 A 60 444 UNP A0A144A134_PLAF7 DBREF2 6RN1 A A0A144A134 60 444 DBREF1 6RN1 B 60 444 UNP A0A144A134_PLAF7 DBREF2 6RN1 B A0A144A134 60 444 SEQRES 1 A 385 ASP SER LEU ILE MET PHE LEU VAL GLU ILE PHE ARG SER SEQRES 2 A 385 LEU PHE VAL SER ASN CYS ILE ASP LYS ASN ILE ASP ASN SEQRES 3 A 385 VAL LEU LEU SER ILE GLU GLU MET PHE ILE ASP HIS TYR SEQRES 4 A 385 TYR ASN PRO GLN HIS SER ARG LEU LYS TYR LEU ILE ASP SEQRES 5 A 385 ASP VAL GLY ILE PHE PHE THR LYS LEU PRO ILE THR LYS SEQRES 6 A 385 ALA PHE HIS THR TYR ASN LYS LYS TYR ARG ILE THR LYS SEQRES 7 A 385 ARG LEU TYR ALA PRO PRO THR PHE ASN GLU VAL ARG HIS SEQRES 8 A 385 ILE LEU ASN LEU ALA GLN ILE LEU SER LEU GLU GLU GLY SEQRES 9 A 385 LEU ASP LEU LEU THR PHE ASP ALA ASP GLU THR LEU TYR SEQRES 10 A 385 PRO ASP GLY HIS ASP PHE ASN ASP GLU VAL LEU ALA SER SEQRES 11 A 385 TYR ILE SER CYS LEU LEU LYS LYS MET ASN ILE ALA ILE SEQRES 12 A 385 VAL THR ALA ALA SER TYR ASN ASN ASP ALA GLU LYS TYR SEQRES 13 A 385 GLN LYS ARG LEU GLU ASN LEU LEU LYS TYR PHE SER LYS SEQRES 14 A 385 HIS ASN ILE LYS ASP GLY SER TYR LYS ASN PHE TYR VAL SEQRES 15 A 385 MET GLY GLY GLU SER ASN TYR LEU PHE LYS CYS ASN GLU SEQRES 16 A 385 GLU ALA THR LEU TYR SER VAL PRO GLU ASN GLU TRP ARG SEQRES 17 A 385 HIS TYR LYS LYS PHE VAL ASP TYR ASP THR VAL GLN GLU SEQRES 18 A 385 ILE LEU ASN ILE SER GLU LYS CYS LEU GLU LYS VAL ILE SEQRES 19 A 385 LYS ASP PHE GLY LEU CYS ALA GLN ILE GLN ARG LYS GLU SEQRES 20 A 385 LYS SER ILE GLY LEU VAL PRO ASN LYS ILE PRO SER LEU SEQRES 21 A 385 ASN ILE LYS ASN GLU GLN LYS ASN TYR MET ILE LYS TYR SEQRES 22 A 385 GLU VAL LEU GLU GLU ALA VAL ILE ARG ILE LYS LYS GLU SEQRES 23 A 385 ILE ILE LYS ASN LYS ILE THR ALA PRO TYR CYS ALA PHE SEQRES 24 A 385 ASN GLY GLY GLN ASP LEU TRP VAL ASP VAL GLY ASN LYS SEQRES 25 A 385 ALA GLU GLY LEU LEU ILE LEU GLN LYS LEU LEU LYS ILE SEQRES 26 A 385 GLN LYS LYS LYS CYS CYS HIS ILE GLY ASP GLN PHE LEU SEQRES 27 A 385 HIS SER GLY ASN ASP PHE PRO THR ARG PHE CYS SER LEU SEQRES 28 A 385 THR LEU TRP VAL SER ASN PRO GLN GLU THR LYS ALA CYS SEQRES 29 A 385 LEU LYS SER ILE MET HIS LEU ASN ILE LYS SER PHE ILE SEQRES 30 A 385 PRO GLU VAL LEU TYR GLU ASN GLN SEQRES 1 B 385 ASP SER LEU ILE MET PHE LEU VAL GLU ILE PHE ARG SER SEQRES 2 B 385 LEU PHE VAL SER ASN CYS ILE ASP LYS ASN ILE ASP ASN SEQRES 3 B 385 VAL LEU LEU SER ILE GLU GLU MET PHE ILE ASP HIS TYR SEQRES 4 B 385 TYR ASN PRO GLN HIS SER ARG LEU LYS TYR LEU ILE ASP SEQRES 5 B 385 ASP VAL GLY ILE PHE PHE THR LYS LEU PRO ILE THR LYS SEQRES 6 B 385 ALA PHE HIS THR TYR ASN LYS LYS TYR ARG ILE THR LYS SEQRES 7 B 385 ARG LEU TYR ALA PRO PRO THR PHE ASN GLU VAL ARG HIS SEQRES 8 B 385 ILE LEU ASN LEU ALA GLN ILE LEU SER LEU GLU GLU GLY SEQRES 9 B 385 LEU ASP LEU LEU THR PHE ASP ALA ASP GLU THR LEU TYR SEQRES 10 B 385 PRO ASP GLY HIS ASP PHE ASN ASP GLU VAL LEU ALA SER SEQRES 11 B 385 TYR ILE SER CYS LEU LEU LYS LYS MET ASN ILE ALA ILE SEQRES 12 B 385 VAL THR ALA ALA SER TYR ASN ASN ASP ALA GLU LYS TYR SEQRES 13 B 385 GLN LYS ARG LEU GLU ASN LEU LEU LYS TYR PHE SER LYS SEQRES 14 B 385 HIS ASN ILE LYS ASP GLY SER TYR LYS ASN PHE TYR VAL SEQRES 15 B 385 MET GLY GLY GLU SER ASN TYR LEU PHE LYS CYS ASN GLU SEQRES 16 B 385 GLU ALA THR LEU TYR SER VAL PRO GLU ASN GLU TRP ARG SEQRES 17 B 385 HIS TYR LYS LYS PHE VAL ASP TYR ASP THR VAL GLN GLU SEQRES 18 B 385 ILE LEU ASN ILE SER GLU LYS CYS LEU GLU LYS VAL ILE SEQRES 19 B 385 LYS ASP PHE GLY LEU CYS ALA GLN ILE GLN ARG LYS GLU SEQRES 20 B 385 LYS SER ILE GLY LEU VAL PRO ASN LYS ILE PRO SER LEU SEQRES 21 B 385 ASN ILE LYS ASN GLU GLN LYS ASN TYR MET ILE LYS TYR SEQRES 22 B 385 GLU VAL LEU GLU GLU ALA VAL ILE ARG ILE LYS LYS GLU SEQRES 23 B 385 ILE ILE LYS ASN LYS ILE THR ALA PRO TYR CYS ALA PHE SEQRES 24 B 385 ASN GLY GLY GLN ASP LEU TRP VAL ASP VAL GLY ASN LYS SEQRES 25 B 385 ALA GLU GLY LEU LEU ILE LEU GLN LYS LEU LEU LYS ILE SEQRES 26 B 385 GLN LYS LYS LYS CYS CYS HIS ILE GLY ASP GLN PHE LEU SEQRES 27 B 385 HIS SER GLY ASN ASP PHE PRO THR ARG PHE CYS SER LEU SEQRES 28 B 385 THR LEU TRP VAL SER ASN PRO GLN GLU THR LYS ALA CYS SEQRES 29 B 385 LEU LYS SER ILE MET HIS LEU ASN ILE LYS SER PHE ILE SEQRES 30 B 385 PRO GLU VAL LEU TYR GLU ASN GLN FORMUL 3 HOH *35(H2 O) HELIX 1 AA1 ASP A 60 SER A 76 1 17 HELIX 2 AA2 ILE A 83 ASN A 100 1 18 HELIX 3 AA3 SER A 104 ILE A 110 1 7 HELIX 4 AA4 PRO A 121 ARG A 134 1 14 HELIX 5 AA5 ILE A 135 ARG A 138 5 4 HELIX 6 AA6 THR A 144 SER A 159 1 16 HELIX 7 AA7 ASP A 184 MET A 198 1 15 HELIX 8 AA8 ASP A 211 GLN A 216 1 6 HELIX 9 AA9 LEU A 219 ASN A 230 1 12 HELIX 10 AB1 GLY A 234 LYS A 237 5 4 HELIX 11 AB2 ASP A 274 GLY A 297 1 24 HELIX 12 AB3 LYS A 331 ASN A 349 1 19 HELIX 13 AB4 ASN A 370 LEU A 382 1 13 HELIX 14 AB5 GLN A 385 LYS A 387 5 3 HELIX 15 AB6 ASP A 402 CYS A 408 5 7 HELIX 16 AB7 ASN A 416 MET A 428 1 13 HELIX 17 AB8 SER B 61 SER B 76 1 16 HELIX 18 AB9 ILE B 83 ASN B 100 1 18 HELIX 19 AC1 SER B 104 ILE B 110 1 7 HELIX 20 AC2 PRO B 121 ARG B 134 1 14 HELIX 21 AC3 ILE B 135 ARG B 138 5 4 HELIX 22 AC4 THR B 144 SER B 159 1 16 HELIX 23 AC5 ASP B 184 MET B 198 1 15 HELIX 24 AC6 ASP B 211 LEU B 219 1 9 HELIX 25 AC7 GLU B 220 LYS B 228 1 9 HELIX 26 AC8 PRO B 262 TRP B 266 5 5 HELIX 27 AC9 ASP B 274 GLY B 297 1 24 HELIX 28 AD1 LYS B 331 ASN B 349 1 19 HELIX 29 AD2 ASN B 370 LYS B 383 1 14 HELIX 30 AD3 GLN B 385 LYS B 387 5 3 HELIX 31 AD4 ASN B 416 MET B 428 1 13 SHEET 1 AA1 7 LEU A 258 SER A 260 0 SHEET 2 AA1 7 TYR A 248 CYS A 252 -1 N LYS A 251 O TYR A 259 SHEET 3 AA1 7 PHE A 239 GLY A 243 -1 N GLY A 243 O TYR A 248 SHEET 4 AA1 7 ASN A 199 VAL A 203 1 N ILE A 202 O MET A 242 SHEET 5 AA1 7 LEU A 166 ASP A 170 1 N PHE A 169 O VAL A 203 SHEET 6 AA1 7 CYS A 389 GLY A 393 1 O ILE A 392 N THR A 168 SHEET 7 AA1 7 LEU A 410 TRP A 413 1 O LEU A 410 N HIS A 391 SHEET 1 AA2 4 GLN A 301 LYS A 305 0 SHEET 2 AA2 4 SER A 308 VAL A 312 -1 O VAL A 312 N GLN A 301 SHEET 3 AA2 4 LEU A 364 VAL A 368 -1 O LEU A 364 N LEU A 311 SHEET 4 AA2 4 TYR A 355 ASN A 359 -1 N CYS A 356 O ASP A 367 SHEET 1 AA3 7 TYR B 259 SER B 260 0 SHEET 2 AA3 7 TYR B 248 LYS B 251 -1 N LYS B 251 O TYR B 259 SHEET 3 AA3 7 PHE B 239 GLY B 243 -1 N GLY B 243 O TYR B 248 SHEET 4 AA3 7 ASN B 199 VAL B 203 1 N ILE B 202 O MET B 242 SHEET 5 AA3 7 LEU B 166 ASP B 170 1 N PHE B 169 O VAL B 203 SHEET 6 AA3 7 CYS B 389 GLY B 393 1 O CYS B 390 N THR B 168 SHEET 7 AA3 7 LEU B 410 TRP B 413 1 O LEU B 412 N HIS B 391 SHEET 1 AA4 4 ALA B 300 ARG B 304 0 SHEET 2 AA4 4 SER B 308 PRO B 313 -1 O GLY B 310 N GLN B 303 SHEET 3 AA4 4 LEU B 364 ASP B 367 -1 O VAL B 366 N ILE B 309 SHEET 4 AA4 4 CYS B 356 ASN B 359 -1 N CYS B 356 O ASP B 367 CRYST1 140.660 140.660 86.980 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007109 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011497 0.00000