HEADER PHOTOSYNTHESIS 09-MAY-19 6RNV TITLE THE CRYSTAL STRUCTURE OF THERMOSYNECHOCOCCUS ELONGATUS TITLE 2 PROTOCHLOROPHYLLIDE OXIDOREDUCTASE (POR) COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOSYNECHOCOCCUS ELONGATUS PROTOCHLOROPHYLLIDE COMPND 3 OXIDOREDUCTASE (POR); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS; SOURCE 3 ORGANISM_TAXID: 146786; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIGHT DEPENDENT, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR C.W.LEVY REVDAT 4 24-JAN-24 6RNV 1 REMARK REVDAT 3 27-NOV-19 6RNV 1 JRNL REVDAT 2 06-NOV-19 6RNV 1 JRNL REVDAT 1 30-OCT-19 6RNV 0 JRNL AUTH S.ZHANG,D.J.HEYES,L.FENG,W.SUN,L.O.JOHANNISSEN,H.LIU, JRNL AUTH 2 C.W.LEVY,X.LI,J.YANG,X.YU,M.LIN,S.J.O.HARDMAN,R.HOEVEN, JRNL AUTH 3 M.SAKUMA,S.HAY,D.LEYS,Z.RAO,A.ZHOU,Q.CHENG,N.S.SCRUTTON JRNL TITL STRUCTURAL BASIS FOR ENZYMATIC PHOTOCATALYSIS IN CHLOROPHYLL JRNL TITL 2 BIOSYNTHESIS. JRNL REF NATURE V. 574 722 2019 JRNL REFN ESSN 1476-4687 JRNL PMID 31645759 JRNL DOI 10.1038/S41586-019-1685-2 REMARK 2 REMARK 2 RESOLUTION. 1.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 90346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 4593 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.9500 - 3.9500 1.00 3152 140 0.1659 0.2105 REMARK 3 2 3.9500 - 3.1300 1.00 2986 181 0.1468 0.1770 REMARK 3 3 3.1300 - 2.7400 1.00 2963 146 0.1486 0.1725 REMARK 3 4 2.7400 - 2.4900 1.00 2899 175 0.1376 0.1619 REMARK 3 5 2.4900 - 2.3100 1.00 2930 146 0.1304 0.1404 REMARK 3 6 2.3100 - 2.1700 1.00 2924 148 0.1228 0.1609 REMARK 3 7 2.1700 - 2.0600 1.00 2927 144 0.1286 0.1638 REMARK 3 8 2.0600 - 1.9700 1.00 2893 140 0.1239 0.1657 REMARK 3 9 1.9700 - 1.9000 1.00 2904 140 0.1257 0.1429 REMARK 3 10 1.9000 - 1.8300 1.00 2942 107 0.1189 0.1432 REMARK 3 11 1.8300 - 1.7700 0.99 2858 162 0.1178 0.1629 REMARK 3 12 1.7700 - 1.7200 1.00 2879 145 0.1198 0.1445 REMARK 3 13 1.7200 - 1.6800 0.99 2845 154 0.1228 0.1497 REMARK 3 14 1.6800 - 1.6400 0.99 2842 172 0.1202 0.1505 REMARK 3 15 1.6400 - 1.6000 0.99 2878 148 0.1323 0.1691 REMARK 3 16 1.6000 - 1.5700 0.99 2868 138 0.1350 0.1939 REMARK 3 17 1.5700 - 1.5300 0.99 2833 155 0.1413 0.1896 REMARK 3 18 1.5300 - 1.5100 0.99 2826 165 0.1519 0.1870 REMARK 3 19 1.5100 - 1.4800 0.99 2839 138 0.1627 0.1914 REMARK 3 20 1.4800 - 1.4500 0.98 2808 174 0.1831 0.2553 REMARK 3 21 1.4500 - 1.4300 0.98 2809 150 0.2047 0.2451 REMARK 3 22 1.4300 - 1.4100 0.98 2840 135 0.2146 0.2682 REMARK 3 23 1.4100 - 1.3900 0.98 2758 165 0.2300 0.2472 REMARK 3 24 1.3900 - 1.3700 0.98 2759 182 0.2527 0.2949 REMARK 3 25 1.3700 - 1.3500 0.98 2825 145 0.2691 0.2989 REMARK 3 26 1.3500 - 1.3300 0.97 2779 137 0.2773 0.2966 REMARK 3 27 1.3300 - 1.3200 0.97 2766 155 0.3034 0.3615 REMARK 3 28 1.3200 - 1.3000 0.97 2772 169 0.3084 0.3448 REMARK 3 29 1.3000 - 1.2800 0.96 2718 154 0.3294 0.3242 REMARK 3 30 1.2800 - 1.2700 0.96 2731 183 0.3488 0.3651 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.157 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.785 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2378 REMARK 3 ANGLE : 1.170 3246 REMARK 3 CHIRALITY : 0.193 353 REMARK 3 PLANARITY : 0.008 429 REMARK 3 DIHEDRAL : 4.837 1793 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RNV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102273. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9159 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91463 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.270 REMARK 200 RESOLUTION RANGE LOW (A) : 53.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 17.50 REMARK 200 R MERGE (I) : 0.09280 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 0.87460 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.360 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RD5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M ZINC CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE PH 5.0, 20 % W/V PEG 6K, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.33600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.67200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.67200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.33600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 635 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 GLN A 4 REMARK 465 THR A 147 REMARK 465 ALA A 148 REMARK 465 ASN A 149 REMARK 465 ARG A 150 REMARK 465 LYS A 151 REMARK 465 GLU A 152 REMARK 465 LEU A 153 REMARK 465 GLY A 154 REMARK 465 GLY A 155 REMARK 465 LYS A 156 REMARK 465 ILE A 157 REMARK 465 PRO A 158 REMARK 465 ILE A 159 REMARK 465 PRO A 160 REMARK 465 ALA A 161 REMARK 465 ALA A 228 REMARK 465 ASP A 229 REMARK 465 THR A 230 REMARK 465 PRO A 231 REMARK 465 LEU A 232 REMARK 465 PHE A 233 REMARK 465 ARG A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 PHE A 237 REMARK 465 PRO A 238 REMARK 465 LEU A 239 REMARK 465 PHE A 240 REMARK 465 GLN A 241 REMARK 465 LYS A 242 REMARK 465 LEU A 243 REMARK 465 PHE A 244 REMARK 465 PRO A 245 REMARK 465 LEU A 246 REMARK 465 PHE A 247 REMARK 465 GLN A 248 REMARK 465 LYS A 249 REMARK 465 LYS A 250 REMARK 465 ILE A 251 REMARK 465 THR A 252 REMARK 465 GLY A 253 REMARK 465 GLY A 254 REMARK 465 GLY A 284 REMARK 465 ASN A 285 REMARK 465 ARG A 286 REMARK 465 GLN A 287 REMARK 465 LYS A 288 REMARK 465 GLU A 289 REMARK 465 GLY A 290 REMARK 465 ARG A 291 REMARK 465 LEU A 323 REMARK 465 GLU A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 255 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN A 220 O HOH A 505 1.38 REMARK 500 OE1 GLU A 213 O HOH A 501 1.39 REMARK 500 OE1 GLU A 172 HH21 ARG A 310 1.48 REMARK 500 HZ3 LYS A 185 O HOH A 511 1.51 REMARK 500 O HOH A 747 O HOH A 754 1.74 REMARK 500 NH1 ARG A 275 O HOH A 502 1.84 REMARK 500 O HOH A 516 O HOH A 655 1.89 REMARK 500 O HOH A 508 O HOH A 571 1.90 REMARK 500 O HOH A 736 O HOH A 748 1.94 REMARK 500 OE2 GLU A 100 O HOH A 503 1.98 REMARK 500 O HOH A 527 O HOH A 611 1.98 REMARK 500 O HOH A 766 O HOH A 785 2.00 REMARK 500 O HOH A 712 O HOH A 722 2.07 REMARK 500 O HOH A 553 O HOH A 609 2.08 REMARK 500 O HOH A 609 O HOH A 741 2.08 REMARK 500 OE1 GLU A 100 O HOH A 504 2.09 REMARK 500 O HOH A 550 O HOH A 779 2.16 REMARK 500 O HOH A 590 O HOH A 768 2.16 REMARK 500 ND2 ASN A 220 O HOH A 505 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 675 O HOH A 712 5665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 198 CB - CG - CD1 ANGL. DEV. = 14.4 DEGREES REMARK 500 ARG A 205 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 116 -63.19 -99.42 REMARK 500 ASP A 164 111.78 -164.41 REMARK 500 ASP A 164 116.74 -166.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 DBREF 6RNV A 1 330 PDB 6RNV 6RNV 1 330 SEQRES 1 A 330 MET SER ASP GLN PRO ARG PRO THR VAL ILE ILE THR GLY SEQRES 2 A 330 ALA SER SER GLY VAL GLY LEU TYR ALA THR LYS ALA LEU SEQRES 3 A 330 ALA ASN ARG GLY TRP HIS VAL ILE MET ALA CYS ARG ASN SEQRES 4 A 330 LEU GLU LYS ALA GLU GLN ALA ALA LYS ASN LEU GLN ILE SEQRES 5 A 330 PRO PRO GLU ALA TYR THR ILE LEU HIS LEU ASP LEU SER SEQRES 6 A 330 SER LEU ALA SER VAL ARG GLY PHE VAL GLU SER PHE ARG SEQRES 7 A 330 ALA LEU ASN ARG PRO LEU ARG ALA LEU VAL CYS ASN ALA SEQRES 8 A 330 ALA VAL TYR TYR PRO LEU LEU LYS GLU PRO ILE TYR SER SEQRES 9 A 330 VAL ASP GLY TYR GLU ILE THR VAL ALA THR ASN HIS LEU SEQRES 10 A 330 GLY HIS PHE LEU LEU ILE ASN LEU LEU LEU GLU ASP LEU SEQRES 11 A 330 LYS ASN SER PRO GLU SER ASP LYS ARG LEU VAL ILE LEU SEQRES 12 A 330 GLY THR VAL THR ALA ASN ARG LYS GLU LEU GLY GLY LYS SEQRES 13 A 330 ILE PRO ILE PRO ALA PRO PRO ASP LEU GLY ASN LEU GLU SEQRES 14 A 330 GLY PHE GLU LYS GLY PHE LYS LYS PRO ILE ALA MET ILE SEQRES 15 A 330 ASN GLY LYS PRO PHE LYS SER GLY LYS ALA TYR LYS ASP SEQRES 16 A 330 SER LYS LEU CYS ASN MET LEU THR ALA ARG GLU LEU HIS SEQRES 17 A 330 ARG ARG PHE HIS GLU SER THR GLY ILE VAL PHE ASN SER SEQRES 18 A 330 LEU TYR PRO GLY CYS VAL ALA ASP THR PRO LEU PHE ARG SEQRES 19 A 330 HIS HIS PHE PRO LEU PHE GLN LYS LEU PHE PRO LEU PHE SEQRES 20 A 330 GLN LYS LYS ILE THR GLY GLY TYR VAL SER GLN GLU LEU SEQRES 21 A 330 ALA GLY GLU ARG VAL ALA MET VAL VAL ALA ASP PRO GLU SEQRES 22 A 330 PHE ARG GLN SER GLY VAL HIS TRP SER TRP GLY ASN ARG SEQRES 23 A 330 GLN LYS GLU GLY ARG LYS ALA PHE VAL GLN GLU LEU SER SEQRES 24 A 330 ALA GLU ALA SER ASP GLU GLN LYS ALA ARG ARG LEU TRP SEQRES 25 A 330 GLU LEU SER GLU LYS LEU VAL GLY LEU ALA LEU GLU HIS SEQRES 26 A 330 HIS HIS HIS HIS HIS HET CL A 401 1 HET CL A 402 1 HETNAM CL CHLORIDE ION FORMUL 2 CL 2(CL 1-) FORMUL 4 HOH *362(H2 O) HELIX 1 AA1 SER A 16 ARG A 29 1 14 HELIX 2 AA2 ASN A 39 LEU A 50 1 12 HELIX 3 AA3 PRO A 53 GLU A 55 5 3 HELIX 4 AA4 SER A 66 LEU A 80 1 15 HELIX 5 AA5 GLU A 109 HIS A 116 1 8 HELIX 6 AA6 HIS A 116 SER A 133 1 18 HELIX 7 AA7 LEU A 168 LYS A 173 1 6 HELIX 8 AA8 LYS A 188 GLY A 216 1 29 HELIX 9 AA9 SER A 257 ASP A 271 1 15 HELIX 10 AB1 PRO A 272 ARG A 275 5 4 HELIX 11 AB2 SER A 299 ASP A 304 1 6 HELIX 12 AB3 ASP A 304 VAL A 319 1 16 SHEET 1 AA1 8 TYR A 57 HIS A 61 0 SHEET 2 AA1 8 HIS A 32 CYS A 37 1 N MET A 35 O THR A 58 SHEET 3 AA1 8 THR A 8 THR A 12 1 N VAL A 9 O ILE A 34 SHEET 4 AA1 8 LEU A 84 CYS A 89 1 O VAL A 88 N ILE A 10 SHEET 5 AA1 8 ARG A 139 LEU A 143 1 O VAL A 141 N LEU A 87 SHEET 6 AA1 8 VAL A 218 TYR A 223 1 O VAL A 218 N LEU A 140 SHEET 7 AA1 8 HIS A 280 SER A 282 1 O TRP A 281 N SER A 221 SHEET 8 AA1 8 PHE A 294 VAL A 295 -1 O PHE A 294 N SER A 282 CISPEP 1 LYS A 177 PRO A 178 0 4.85 SITE 1 AC1 4 LYS A 99 GLU A 100 ARG A 209 HOH A 712 SITE 1 AC2 4 TYR A 95 PRO A 96 LEU A 97 ARG A 309 CRYST1 66.847 66.847 133.008 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014960 0.008637 0.000000 0.00000 SCALE2 0.000000 0.017274 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007518 0.00000