HEADER RNA BINDING PROTEIN 13-MAY-19 6ROL TITLE STRUCTURE OF IMP2 KH34 DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN-LIKE GROWTH FACTOR 2 MRNA-BINDING PROTEIN 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: IMP-2,HEPATOCELLULAR CARCINOMA AUTOANTIGEN P62,IGF-II MRNA- COMPND 5 BINDING PROTEIN 2,VICKZ FAMILY MEMBER 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGF2BP2, IMP2, VICKZ2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SPECIFICITY, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.BHASKAR,J.BISWAS,R.H.SINGER,J.A.CHAO REVDAT 2 24-JAN-24 6ROL 1 REMARK REVDAT 1 16-OCT-19 6ROL 0 JRNL AUTH J.BISWAS,V.L.PATEL,V.BHASKAR,J.A.CHAO,R.H.SINGER, JRNL AUTH 2 C.ELISCOVICH JRNL TITL THE STRUCTURAL BASIS FOR RNA SELECTIVITY BY THE IMP FAMILY JRNL TITL 2 OF RNA-BINDING PROTEINS. JRNL REF NAT COMMUN V. 10 4440 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31570709 JRNL DOI 10.1038/S41467-019-12193-7 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 46167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.1750 - 2.1000 0.00 4631 245 0.2694 0.3026 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ROL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 18-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46202 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 37.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.05660 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.41140 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KRM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG-3350, 200MM AMMONIUM SULFATE, REMARK 280 100MM TRIS PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.19000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 423 REMARK 465 GLY A 424 REMARK 465 GLN A 587 REMARK 465 LYS A 588 REMARK 465 GLY B 423 REMARK 465 GLY B 424 REMARK 465 SER B 425 REMARK 465 GLN B 587 REMARK 465 LYS B 588 REMARK 465 GLY C 423 REMARK 465 GLY C 424 REMARK 465 SER C 425 REMARK 465 GLN C 587 REMARK 465 LYS C 588 REMARK 465 GLY D 423 REMARK 465 GLY D 424 REMARK 465 SER D 425 REMARK 465 GLN D 585 REMARK 465 GLU D 586 REMARK 465 GLN D 587 REMARK 465 LYS D 588 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 425 OG REMARK 470 ASP A 470 CG OD1 OD2 REMARK 470 GLN A 585 CG CD OE1 NE2 REMARK 470 GLU A 586 CG CD OE1 OE2 REMARK 470 GLU B 426 CG CD OE1 OE2 REMARK 470 GLU B 428 CG CD OE1 OE2 REMARK 470 ASP B 470 CG OD1 OD2 REMARK 470 LYS B 505 CG CD CE NZ REMARK 470 LYS B 530 CG CD CE NZ REMARK 470 VAL B 532 CG1 CG2 REMARK 470 ASN B 533 CG OD1 ND2 REMARK 470 GLU B 534 CG CD OE1 OE2 REMARK 470 ASN B 537 CG OD1 ND2 REMARK 470 LYS B 583 CD CE NZ REMARK 470 GLN B 584 CG CD OE1 NE2 REMARK 470 GLN B 585 CG CD OE1 NE2 REMARK 470 GLU B 586 CG CD OE1 OE2 REMARK 470 ASP C 470 CG OD1 OD2 REMARK 470 GLN C 581 CD OE1 NE2 REMARK 470 LYS C 583 CD CE NZ REMARK 470 GLN C 584 CG CD OE1 NE2 REMARK 470 GLN C 585 CG CD OE1 NE2 REMARK 470 GLU C 586 CG CD OE1 OE2 REMARK 470 GLU D 426 CG CD OE1 OE2 REMARK 470 GLU D 467 CG CD OE1 OE2 REMARK 470 ASP D 470 CG OD1 OD2 REMARK 470 ASN D 503 CG OD1 ND2 REMARK 470 LYS D 505 CG CD CE NZ REMARK 470 LYS D 527 CG CD CE NZ REMARK 470 LYS D 530 CG CD CE NZ REMARK 470 ARG D 547 CD NE CZ NH1 NH2 REMARK 470 LYS D 583 CG CD CE NZ REMARK 470 GLN D 584 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD2 PHE C 566 HZ2 LYS D 497 1.30 REMARK 500 H PHE D 566 O HOH D 701 1.56 REMARK 500 HO3 GOL A 603 O HOH A 702 1.59 REMARK 500 O THR B 539 HG SER B 540 1.60 REMARK 500 O4 PEG D 605 O HOH D 701 1.83 REMARK 500 O HOH C 715 O HOH C 742 1.97 REMARK 500 O2 SO4 C 613 O HOH C 701 1.97 REMARK 500 O HOH A 702 O HOH A 755 1.98 REMARK 500 O HOH C 742 O HOH C 747 2.00 REMARK 500 O HOH C 805 O HOH C 810 2.00 REMARK 500 O4 SO4 C 614 O HOH C 702 2.00 REMARK 500 O HOH C 713 O HOH C 772 2.02 REMARK 500 O1 PEG D 606 O HOH D 702 2.02 REMARK 500 OE2 GLU B 577 O HOH B 701 2.03 REMARK 500 O HOH A 790 O HOH A 797 2.06 REMARK 500 N PHE D 566 O HOH D 701 2.07 REMARK 500 O HOH C 757 O HOH C 814 2.07 REMARK 500 O HOH C 704 O HOH C 807 2.07 REMARK 500 O HOH C 796 O HOH C 811 2.08 REMARK 500 O4 PEG D 605 O HOH D 703 2.09 REMARK 500 OE2 GLU A 428 NH1 ARG A 576 2.10 REMARK 500 O HOH B 702 O HOH B 728 2.10 REMARK 500 OE1 GLN B 452 O HOH B 702 2.11 REMARK 500 O PHE A 501 O2 GOL A 601 2.12 REMARK 500 O1 PEG B 603 O HOH B 703 2.12 REMARK 500 O HOH C 701 O HOH C 710 2.12 REMARK 500 O3 GOL C 605 O HOH C 703 2.14 REMARK 500 O HOH A 747 O HOH A 795 2.14 REMARK 500 NH2 ARG A 547 O HOH A 701 2.14 REMARK 500 NH1 ARG C 573 O2 GOL D 602 2.16 REMARK 500 O3 GOL A 603 O HOH A 702 2.18 REMARK 500 OE1 GLU C 428 O HOH C 704 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 503 H GLY C 528 2645 1.53 REMARK 500 O HOH A 714 O HOH C 746 2645 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 501 43.08 -96.27 REMARK 500 SER A 540 -5.09 73.56 REMARK 500 SER B 540 -6.73 76.48 REMARK 500 LYS B 583 1.05 -64.07 REMARK 500 SER C 540 -4.62 73.75 REMARK 500 PRO D 504 -4.97 -56.98 REMARK 500 SER D 540 -4.70 75.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG D 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG D 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG D 606 DBREF 6ROL A 426 588 UNP Q9Y6M1 IF2B2_HUMAN 426 588 DBREF 6ROL B 426 588 UNP Q9Y6M1 IF2B2_HUMAN 426 588 DBREF 6ROL C 426 588 UNP Q9Y6M1 IF2B2_HUMAN 426 588 DBREF 6ROL D 426 588 UNP Q9Y6M1 IF2B2_HUMAN 426 588 SEQADV 6ROL GLY A 423 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY A 424 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL SER A 425 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY B 423 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY B 424 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL SER B 425 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY C 423 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY C 424 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL SER C 425 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY D 423 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL GLY D 424 UNP Q9Y6M1 EXPRESSION TAG SEQADV 6ROL SER D 425 UNP Q9Y6M1 EXPRESSION TAG SEQRES 1 A 166 GLY GLY SER GLU GLN GLU ILE VAL ASN LEU PHE ILE PRO SEQRES 2 A 166 THR GLN ALA VAL GLY ALA ILE ILE GLY LYS LYS GLY ALA SEQRES 3 A 166 HIS ILE LYS GLN LEU ALA ARG PHE ALA GLY ALA SER ILE SEQRES 4 A 166 LYS ILE ALA PRO ALA GLU GLY PRO ASP VAL SER GLU ARG SEQRES 5 A 166 MET VAL ILE ILE THR GLY PRO PRO GLU ALA GLN PHE LYS SEQRES 6 A 166 ALA GLN GLY ARG ILE PHE GLY LYS LEU LYS GLU GLU ASN SEQRES 7 A 166 PHE PHE ASN PRO LYS GLU GLU VAL LYS LEU GLU ALA HIS SEQRES 8 A 166 ILE ARG VAL PRO SER SER THR ALA GLY ARG VAL ILE GLY SEQRES 9 A 166 LYS GLY GLY LYS THR VAL ASN GLU LEU GLN ASN LEU THR SEQRES 10 A 166 SER ALA GLU VAL ILE VAL PRO ARG ASP GLN THR PRO ASP SEQRES 11 A 166 GLU ASN GLU GLU VAL ILE VAL ARG ILE ILE GLY HIS PHE SEQRES 12 A 166 PHE ALA SER GLN THR ALA GLN ARG LYS ILE ARG GLU ILE SEQRES 13 A 166 VAL GLN GLN VAL LYS GLN GLN GLU GLN LYS SEQRES 1 B 166 GLY GLY SER GLU GLN GLU ILE VAL ASN LEU PHE ILE PRO SEQRES 2 B 166 THR GLN ALA VAL GLY ALA ILE ILE GLY LYS LYS GLY ALA SEQRES 3 B 166 HIS ILE LYS GLN LEU ALA ARG PHE ALA GLY ALA SER ILE SEQRES 4 B 166 LYS ILE ALA PRO ALA GLU GLY PRO ASP VAL SER GLU ARG SEQRES 5 B 166 MET VAL ILE ILE THR GLY PRO PRO GLU ALA GLN PHE LYS SEQRES 6 B 166 ALA GLN GLY ARG ILE PHE GLY LYS LEU LYS GLU GLU ASN SEQRES 7 B 166 PHE PHE ASN PRO LYS GLU GLU VAL LYS LEU GLU ALA HIS SEQRES 8 B 166 ILE ARG VAL PRO SER SER THR ALA GLY ARG VAL ILE GLY SEQRES 9 B 166 LYS GLY GLY LYS THR VAL ASN GLU LEU GLN ASN LEU THR SEQRES 10 B 166 SER ALA GLU VAL ILE VAL PRO ARG ASP GLN THR PRO ASP SEQRES 11 B 166 GLU ASN GLU GLU VAL ILE VAL ARG ILE ILE GLY HIS PHE SEQRES 12 B 166 PHE ALA SER GLN THR ALA GLN ARG LYS ILE ARG GLU ILE SEQRES 13 B 166 VAL GLN GLN VAL LYS GLN GLN GLU GLN LYS SEQRES 1 C 166 GLY GLY SER GLU GLN GLU ILE VAL ASN LEU PHE ILE PRO SEQRES 2 C 166 THR GLN ALA VAL GLY ALA ILE ILE GLY LYS LYS GLY ALA SEQRES 3 C 166 HIS ILE LYS GLN LEU ALA ARG PHE ALA GLY ALA SER ILE SEQRES 4 C 166 LYS ILE ALA PRO ALA GLU GLY PRO ASP VAL SER GLU ARG SEQRES 5 C 166 MET VAL ILE ILE THR GLY PRO PRO GLU ALA GLN PHE LYS SEQRES 6 C 166 ALA GLN GLY ARG ILE PHE GLY LYS LEU LYS GLU GLU ASN SEQRES 7 C 166 PHE PHE ASN PRO LYS GLU GLU VAL LYS LEU GLU ALA HIS SEQRES 8 C 166 ILE ARG VAL PRO SER SER THR ALA GLY ARG VAL ILE GLY SEQRES 9 C 166 LYS GLY GLY LYS THR VAL ASN GLU LEU GLN ASN LEU THR SEQRES 10 C 166 SER ALA GLU VAL ILE VAL PRO ARG ASP GLN THR PRO ASP SEQRES 11 C 166 GLU ASN GLU GLU VAL ILE VAL ARG ILE ILE GLY HIS PHE SEQRES 12 C 166 PHE ALA SER GLN THR ALA GLN ARG LYS ILE ARG GLU ILE SEQRES 13 C 166 VAL GLN GLN VAL LYS GLN GLN GLU GLN LYS SEQRES 1 D 166 GLY GLY SER GLU GLN GLU ILE VAL ASN LEU PHE ILE PRO SEQRES 2 D 166 THR GLN ALA VAL GLY ALA ILE ILE GLY LYS LYS GLY ALA SEQRES 3 D 166 HIS ILE LYS GLN LEU ALA ARG PHE ALA GLY ALA SER ILE SEQRES 4 D 166 LYS ILE ALA PRO ALA GLU GLY PRO ASP VAL SER GLU ARG SEQRES 5 D 166 MET VAL ILE ILE THR GLY PRO PRO GLU ALA GLN PHE LYS SEQRES 6 D 166 ALA GLN GLY ARG ILE PHE GLY LYS LEU LYS GLU GLU ASN SEQRES 7 D 166 PHE PHE ASN PRO LYS GLU GLU VAL LYS LEU GLU ALA HIS SEQRES 8 D 166 ILE ARG VAL PRO SER SER THR ALA GLY ARG VAL ILE GLY SEQRES 9 D 166 LYS GLY GLY LYS THR VAL ASN GLU LEU GLN ASN LEU THR SEQRES 10 D 166 SER ALA GLU VAL ILE VAL PRO ARG ASP GLN THR PRO ASP SEQRES 11 D 166 GLU ASN GLU GLU VAL ILE VAL ARG ILE ILE GLY HIS PHE SEQRES 12 D 166 PHE ALA SER GLN THR ALA GLN ARG LYS ILE ARG GLU ILE SEQRES 13 D 166 VAL GLN GLN VAL LYS GLN GLN GLU GLN LYS HET GOL A 601 14 HET GOL A 602 14 HET GOL A 603 14 HET GOL A 604 14 HET GOL A 605 14 HET GOL A 606 14 HET PEG A 607 17 HET SO4 A 608 5 HET SO4 A 609 5 HET GOL B 601 14 HET GOL B 602 14 HET PEG B 603 17 HET GOL C 601 14 HET GOL C 602 14 HET GOL C 603 14 HET GOL C 604 14 HET GOL C 605 14 HET GOL C 606 14 HET GOL C 607 14 HET PEG C 608 17 HET PEG C 609 17 HET PEG C 610 17 HET PEG C 611 17 HET PEG C 612 17 HET SO4 C 613 5 HET SO4 C 614 5 HET GOL D 601 14 HET GOL D 602 14 HET GOL D 603 14 HET PEG D 604 17 HET PEG D 605 17 HET PEG D 606 17 HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 18(C3 H8 O3) FORMUL 11 PEG 10(C4 H10 O3) FORMUL 12 SO4 4(O4 S 2-) FORMUL 37 HOH *335(H2 O) HELIX 1 AA1 ALA A 438 GLY A 444 1 7 HELIX 2 AA2 GLY A 447 GLY A 458 1 12 HELIX 3 AA3 PRO A 481 GLU A 499 1 19 HELIX 4 AA4 THR A 520 GLY A 526 1 7 HELIX 5 AA5 GLY A 529 SER A 540 1 12 HELIX 6 AA6 HIS A 564 GLN A 585 1 22 HELIX 7 AA7 ALA B 438 GLY B 444 1 7 HELIX 8 AA8 GLY B 447 GLY B 458 1 12 HELIX 9 AA9 PRO B 481 GLU B 499 1 19 HELIX 10 AB1 SER B 518 GLY B 526 1 9 HELIX 11 AB2 GLY B 529 SER B 540 1 12 HELIX 12 AB3 PHE B 565 LYS B 583 1 19 HELIX 13 AB4 GLN B 584 GLU B 586 5 3 HELIX 14 AB5 ALA C 438 GLY C 444 1 7 HELIX 15 AB6 GLY C 447 GLY C 458 1 12 HELIX 16 AB7 PRO C 481 GLU C 499 1 19 HELIX 17 AB8 SER C 518 GLY C 526 1 9 HELIX 18 AB9 GLY C 529 SER C 540 1 12 HELIX 19 AC1 HIS C 564 GLU C 586 1 23 HELIX 20 AC2 ALA D 438 GLY D 444 1 7 HELIX 21 AC3 GLY D 447 GLY D 458 1 12 HELIX 22 AC4 PRO D 481 GLU D 499 1 19 HELIX 23 AC5 SER D 518 GLY D 526 1 9 HELIX 24 AC6 GLY D 529 SER D 540 1 12 HELIX 25 AC7 HIS D 564 LYS D 583 1 20 SHEET 1 AA1 6 SER A 460 ILE A 463 0 SHEET 2 AA1 6 GLU A 473 GLY A 480 -1 O ILE A 477 N LYS A 462 SHEET 3 AA1 6 GLU A 428 PRO A 435 -1 N LEU A 432 O VAL A 476 SHEET 4 AA1 6 LEU A 510 PRO A 517 -1 O HIS A 513 N ASN A 431 SHEET 5 AA1 6 GLU A 556 GLY A 563 -1 O VAL A 557 N VAL A 516 SHEET 6 AA1 6 GLU A 542 ILE A 544 -1 N ILE A 544 O ARG A 560 SHEET 1 AA2 6 SER B 460 ILE B 463 0 SHEET 2 AA2 6 GLU B 473 GLY B 480 -1 O ILE B 477 N LYS B 462 SHEET 3 AA2 6 GLU B 428 PRO B 435 -1 N LEU B 432 O VAL B 476 SHEET 4 AA2 6 LYS B 509 PRO B 517 -1 O HIS B 513 N ASN B 431 SHEET 5 AA2 6 GLU B 556 HIS B 564 -1 O VAL B 557 N VAL B 516 SHEET 6 AA2 6 GLU B 542 ILE B 544 -1 N ILE B 544 O ARG B 560 SHEET 1 AA3 6 SER C 460 ILE C 463 0 SHEET 2 AA3 6 GLU C 473 GLY C 480 -1 O ILE C 477 N LYS C 462 SHEET 3 AA3 6 GLU C 428 PRO C 435 -1 N LEU C 432 O VAL C 476 SHEET 4 AA3 6 LEU C 510 PRO C 517 -1 O HIS C 513 N ASN C 431 SHEET 5 AA3 6 GLU C 556 GLY C 563 -1 O ILE C 561 N ALA C 512 SHEET 6 AA3 6 GLU C 542 ILE C 544 -1 N ILE C 544 O ARG C 560 SHEET 1 AA4 6 SER D 460 ILE D 463 0 SHEET 2 AA4 6 GLU D 473 GLY D 480 -1 O ILE D 477 N LYS D 462 SHEET 3 AA4 6 GLU D 428 PRO D 435 -1 N LEU D 432 O VAL D 476 SHEET 4 AA4 6 LEU D 510 PRO D 517 -1 O HIS D 513 N ASN D 431 SHEET 5 AA4 6 GLU D 556 GLY D 563 -1 O VAL D 557 N VAL D 516 SHEET 6 AA4 6 GLU D 542 ILE D 544 -1 N GLU D 542 O ILE D 562 SITE 1 AC1 6 PRO A 435 PHE A 501 PHE A 502 LYS A 509 SITE 2 AC1 6 HOH A 725 HOH A 730 SITE 1 AC2 7 ALA A 441 GLY A 444 LYS A 445 HIS A 449 SITE 2 AC2 7 LYS A 495 HOH A 708 HOH A 750 SITE 1 AC3 7 ILE A 450 LYS A 451 ALA A 454 SER A 460 SITE 2 AC3 7 ILE A 461 LYS A 462 HOH A 702 SITE 1 AC4 4 GLU A 473 GLU A 511 HIS A 513 HOH A 709 SITE 1 AC5 8 GLU A 428 PRO A 482 GLN A 485 PHE A 486 SITE 2 AC5 8 GLN A 569 GLN A 572 ARG A 576 HOH A 723 SITE 1 AC6 8 LYS A 497 GLU A 507 VAL A 508 HIS A 564 SITE 2 AC6 8 HOH A 703 HOH A 753 PHE B 566 PEG B 603 SITE 1 AC7 6 GLN A 452 PHE A 456 ARG A 491 ARG B 573 SITE 2 AC7 6 GLU B 577 HOH B 701 SITE 1 AC8 5 ARG A 523 GLY A 526 LYS A 527 HOH A 728 SITE 2 AC8 5 HOH A 748 SITE 1 AC9 5 ASN A 431 MET A 475 HIS A 513 ARG A 515 SITE 2 AC9 5 ILE A 558 SITE 1 AD1 4 ASN B 431 HIS B 513 ARG B 515 ILE B 558 SITE 1 AD2 4 ALA B 454 SER B 460 ILE B 461 HOH B 708 SITE 1 AD3 10 LYS A 497 GOL A 606 GLU B 507 VAL B 508 SITE 2 AD3 10 HIS B 564 PHE B 565 PHE B 566 ALA B 567 SITE 3 AD3 10 HOH B 703 HOH B 705 SITE 1 AD4 9 LYS C 497 GLU C 507 HIS C 564 PHE C 565 SITE 2 AD4 9 PHE C 566 HOH C 768 HOH C 776 LYS D 497 SITE 3 AD4 9 GLU D 507 SITE 1 AD5 2 GLU C 467 VAL C 471 SITE 1 AD6 3 GLU C 473 GLU C 511 PEG C 612 SITE 1 AD7 8 PRO C 435 PHE C 501 ASN C 503 GLU C 507 SITE 2 AD7 8 VAL C 508 LYS C 509 GOL C 605 HOH C 733 SITE 1 AD8 4 ASN C 503 LYS C 509 GOL C 604 HOH C 703 SITE 1 AD9 4 ILE C 450 ALA C 454 ILE C 461 LYS C 462 SITE 1 AE1 5 ARG C 523 GLY C 526 LYS C 527 HOH C 709 SITE 2 AE1 5 HOH C 751 SITE 1 AE2 5 PRO C 517 SER C 518 SER C 519 GLU C 555 SITE 2 AE2 5 HOH C 800 SITE 1 AE3 3 GLN C 452 ARG C 455 PHE C 456 SITE 1 AE4 7 HIS C 449 GLN C 452 LYS C 495 GLU C 498 SITE 2 AE4 7 HOH C 752 ARG D 573 GLU D 577 SITE 1 AE5 7 ASN C 500 PHE C 502 ASN C 503 GLU C 506 SITE 2 AE5 7 HOH C 713 HOH C 761 HOH C 772 SITE 1 AE6 6 GLU C 511 HIS C 513 ILE C 558 ARG C 560 SITE 2 AE6 6 GOL C 603 HOH C 812 SITE 1 AE7 7 ASN C 503 LYS C 505 GLU C 507 LYS C 509 SITE 2 AE7 7 HIS C 564 HOH C 701 HOH C 710 SITE 1 AE8 6 VAL C 545 PRO C 546 ASP C 548 GLN C 549 SITE 2 AE8 6 HOH C 702 HOH C 725 SITE 1 AE9 4 ALA D 454 SER D 460 ILE D 461 LYS D 462 SITE 1 AF1 6 ARG C 573 LYS C 574 GLU C 577 LYS D 495 SITE 2 AF1 6 GLU D 498 HOH D 726 SITE 1 AF2 3 PHE D 433 GLU D 473 GLU D 511 SITE 1 AF3 4 ILE D 463 PRO D 465 ALA D 466 ARG D 474 SITE 1 AF4 6 LYS C 497 THR D 539 HIS D 564 ALA D 567 SITE 2 AF4 6 HOH D 701 HOH D 703 SITE 1 AF5 4 ASN D 431 HIS D 513 ARG D 515 HOH D 702 CRYST1 76.880 62.380 85.740 90.00 91.32 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013007 0.000000 0.000300 0.00000 SCALE2 0.000000 0.016031 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011666 0.00000