HEADER HYDROLASE 14-MAY-19 6RPP TITLE CRYSTAL STRUCTURE OF PABCDC21-1 INTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MCM INTEINS CONTAINING HELICASE,MINICHROMOSOME MAINTENANCE COMPND 5 PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: INCLUDING THREE RESIDUES OF N-TERMINAL "SER-ALA-LYS", COMPND 9 AND ONE RESIDUE C-TERMINAL "ALA" EXTEIN SEQUENCES. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI (STRAIN GE5 / ORSAY); SOURCE 3 ORGANISM_TAXID: 272844; SOURCE 4 GENE: CDC21, PAB2373; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: T7 EXPRESS; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PBHRSF399 KEYWDS INTEIN, PROTEIN-SPLICING, HINT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.MIKULA,H.M.BEYER,H.IWAI REVDAT 3 24-JAN-24 6RPP 1 REMARK REVDAT 2 30-OCT-19 6RPP 1 JRNL REVDAT 1 14-AUG-19 6RPP 0 JRNL AUTH H.M.BEYER,K.M.MIKULA,T.V.KUDLING,H.IWAI JRNL TITL CRYSTAL STRUCTURES OF CDC21-1 INTEINS FROM HYPERTHERMOPHILIC JRNL TITL 2 ARCHAEA REVEAL THE SELECTION MECHANISM FOR THE HIGHLY JRNL TITL 3 CONSERVED HOMING ENDONUCLEASE INSERTION SITE. JRNL REF EXTREMOPHILES V. 23 669 2019 JRNL REFN ESSN 1433-4909 JRNL PMID 31363851 JRNL DOI 10.1007/S00792-019-01117-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20124702 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.1_3469 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3800 - 3.2100 1.00 2923 167 0.1611 0.2147 REMARK 3 2 3.2100 - 2.5400 1.00 2807 160 0.1872 0.1949 REMARK 3 3 2.5400 - 2.2200 1.00 2782 145 0.1824 0.2258 REMARK 3 4 2.2200 - 2.0200 1.00 2793 136 0.1814 0.2330 REMARK 3 5 2.0200 - 1.8800 1.00 2770 135 0.1854 0.2301 REMARK 3 6 1.8800 - 1.7600 1.00 2740 154 0.1983 0.2323 REMARK 3 7 1.7600 - 1.6800 1.00 2770 121 0.2050 0.2573 REMARK 3 8 1.6800 - 1.6000 0.99 2735 160 0.2219 0.2455 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.186 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1397 REMARK 3 ANGLE : 1.384 1885 REMARK 3 CHIRALITY : 0.085 204 REMARK 3 PLANARITY : 0.009 245 REMARK 3 DIHEDRAL : 6.331 1181 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2011 18.8636 18.8749 REMARK 3 T TENSOR REMARK 3 T11: 0.1749 T22: 0.1380 REMARK 3 T33: 0.1890 T12: 0.0015 REMARK 3 T13: 0.0049 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 3.2637 L22: 2.7644 REMARK 3 L33: 4.5072 L12: -0.8293 REMARK 3 L13: -0.7181 L23: -0.5545 REMARK 3 S TENSOR REMARK 3 S11: -0.0934 S12: 0.0260 S13: 0.1014 REMARK 3 S21: -0.0210 S22: 0.0946 S23: -0.2060 REMARK 3 S31: -0.2107 S32: 0.2421 S33: -0.0523 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1607 12.2004 6.9637 REMARK 3 T TENSOR REMARK 3 T11: 0.2212 T22: 0.2346 REMARK 3 T33: 0.2228 T12: 0.0362 REMARK 3 T13: 0.0206 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 4.0472 L22: 3.7354 REMARK 3 L33: 4.3335 L12: -0.9853 REMARK 3 L13: -1.8680 L23: -0.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.0322 S12: 0.4178 S13: -0.1606 REMARK 3 S21: -0.4209 S22: -0.2838 S23: -0.1720 REMARK 3 S31: 0.1962 S32: 0.1066 S33: 0.0730 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6217 6.8107 29.5733 REMARK 3 T TENSOR REMARK 3 T11: 0.2835 T22: 0.1909 REMARK 3 T33: 0.2226 T12: 0.0241 REMARK 3 T13: -0.0385 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 5.1722 L22: 3.2490 REMARK 3 L33: 4.2953 L12: 1.9238 REMARK 3 L13: -3.1286 L23: -1.7740 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.3997 S13: -0.3542 REMARK 3 S21: 0.4799 S22: -0.1358 S23: -0.3164 REMARK 3 S31: 0.1829 S32: 0.4210 S33: 0.2314 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1007 8.9006 17.1251 REMARK 3 T TENSOR REMARK 3 T11: 0.1386 T22: 0.1291 REMARK 3 T33: 0.2231 T12: -0.0379 REMARK 3 T13: -0.0022 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.8844 L22: 3.7597 REMARK 3 L33: 6.3905 L12: -1.5169 REMARK 3 L13: 0.2111 L23: -1.3307 REMARK 3 S TENSOR REMARK 3 S11: -0.0558 S12: 0.0535 S13: -0.0693 REMARK 3 S21: -0.0846 S22: -0.2785 S23: -0.2868 REMARK 3 S31: 0.5857 S32: 0.6214 S33: 0.0705 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5357 20.8740 17.2586 REMARK 3 T TENSOR REMARK 3 T11: 0.1411 T22: 0.1498 REMARK 3 T33: 0.1730 T12: 0.0170 REMARK 3 T13: -0.0304 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.3666 L22: 2.0375 REMARK 3 L33: 7.5750 L12: -0.0141 REMARK 3 L13: -0.3885 L23: 0.5169 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: -0.0682 S13: 0.1417 REMARK 3 S21: -0.0333 S22: 0.0035 S23: 0.2086 REMARK 3 S31: -0.3926 S32: -0.3542 S33: 0.0646 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6606 9.1464 23.2009 REMARK 3 T TENSOR REMARK 3 T11: 0.2700 T22: 0.3174 REMARK 3 T33: 0.3365 T12: -0.0922 REMARK 3 T13: 0.0361 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 3.8854 L22: 5.7782 REMARK 3 L33: 4.8749 L12: 0.3921 REMARK 3 L13: -1.2271 L23: -2.5515 REMARK 3 S TENSOR REMARK 3 S11: 0.0977 S12: -0.3982 S13: -0.3648 REMARK 3 S21: 0.1776 S22: -0.1878 S23: 0.7403 REMARK 3 S31: 0.7667 S32: -0.7128 S33: 0.0275 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9104 16.0704 21.8679 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.1484 REMARK 3 T33: 0.1816 T12: -0.0215 REMARK 3 T13: -0.0132 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.4496 L22: 1.3562 REMARK 3 L33: 2.4837 L12: -0.0939 REMARK 3 L13: -0.4367 L23: -0.7084 REMARK 3 S TENSOR REMARK 3 S11: -0.0276 S12: -0.0466 S13: -0.1094 REMARK 3 S21: 0.0493 S22: 0.0070 S23: 0.1603 REMARK 3 S31: 0.0168 S32: -0.2167 S33: 0.0154 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23504 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O1S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, POLYETHYLENE GLYCOL REMARK 280 4000, AMMONIUM ACETATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.87300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 24.87300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.74050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.79400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.74050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.79400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.87300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.74050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.79400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 24.87300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.74050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.79400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C ACT A 201 LIES ON A SPECIAL POSITION. REMARK 375 CH3 ACT A 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 411 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 429 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 55 CA - CB - CG ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 12 26.94 -143.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 202 DBREF 6RPP A -1 164 UNP Q9UYR7 Q9UYR7_PYRAB 333 498 SEQADV 6RPP SER A -2 UNP Q9UYR7 EXPRESSION TAG SEQADV 6RPP ALA A 1 UNP Q9UYR7 CYS 335 ENGINEERED MUTATION SEQADV 6RPP ALA A 164 UNP Q9UYR7 ASN 498 ENGINEERED MUTATION SEQADV 6RPP ALA A 165 UNP Q9UYR7 EXPRESSION TAG SEQRES 1 A 168 SER ALA LYS ALA VAL ASP TYR GLU THR GLU VAL VAL LEU SEQRES 2 A 168 GLY ASN GLY GLU ARG LYS LYS ILE GLY GLU ILE VAL GLU SEQRES 3 A 168 ARG ALA ILE GLU GLU ALA GLU LYS ASN GLY LYS LEU GLY SEQRES 4 A 168 ARG VAL ASP ASP GLY PHE TYR ALA PRO ILE ASP ILE GLU SEQRES 5 A 168 VAL TYR SER LEU ASP LEU GLU THR LEU LYS VAL ARG LYS SEQRES 6 A 168 ALA ARG ALA ASN ILE ALA TRP LYS ARG THR ALA PRO LYS SEQRES 7 A 168 LYS MET MET LEU VAL LYS THR ARG GLY GLY LYS ARG ILE SEQRES 8 A 168 ARG VAL THR PRO THR HIS PRO PHE PHE VAL LEU GLU GLU SEQRES 9 A 168 GLY LYS VAL ALA MET ARG LYS ALA ARG ASP LEU GLU GLU SEQRES 10 A 168 GLY ASN LYS ILE ALA THR ILE GLU GLY LEU SER VAL SER SEQRES 11 A 168 TRP ASP GLU VAL ALA GLU ILE LEU GLU TYR GLU PRO LYS SEQRES 12 A 168 ASP PRO TRP VAL TYR ASP LEU GLN VAL PRO GLY TYR HIS SEQRES 13 A 168 ASN PHE LEU ALA ASN GLY ILE PHE VAL HIS ALA ALA HET ACT A 201 4 HET PEG A 202 7 HETNAM ACT ACETATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 PEG C4 H10 O3 FORMUL 4 HOH *132(H2 O) HELIX 1 AA1 ILE A 18 GLY A 33 1 16 HELIX 2 AA2 ARG A 110 LEU A 112 5 3 SHEET 1 AA1 2 GLU A 7 VAL A 8 0 SHEET 2 AA1 2 LYS A 16 LYS A 17 -1 O LYS A 16 N VAL A 8 SHEET 1 AA2 4 GLY A 36 VAL A 38 0 SHEET 2 AA2 4 GLY A 41 LEU A 53 -1 O TYR A 43 N GLY A 36 SHEET 3 AA2 4 VAL A 60 THR A 72 -1 O ALA A 63 N VAL A 50 SHEET 4 AA2 4 TRP A 143 GLN A 148 -1 O VAL A 144 N ARG A 71 SHEET 1 AA3 6 ARG A 87 VAL A 90 0 SHEET 2 AA3 6 MET A 77 THR A 82 -1 N VAL A 80 O ILE A 88 SHEET 3 AA3 6 SER A 125 TYR A 137 -1 O LEU A 135 N LEU A 79 SHEET 4 AA3 6 LYS A 117 GLU A 122 -1 N GLU A 122 O SER A 125 SHEET 5 AA3 6 PRO A 95 GLU A 100 -1 N LEU A 99 O LYS A 117 SHEET 6 AA3 6 LYS A 103 LYS A 108 -1 O ALA A 105 N VAL A 98 SHEET 1 AA4 2 ASN A 154 ALA A 157 0 SHEET 2 AA4 2 ILE A 160 HIS A 163 -1 O VAL A 162 N PHE A 155 SITE 1 AC1 1 VAL A 104 SITE 1 AC2 4 GLY A 11 ASN A 12 LYS A 62 GLU A 138 CRYST1 75.481 93.588 49.746 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013248 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020102 0.00000