HEADER PROTEIN BINDING 28-MAY-19 6RUH TITLE NI-SUBSTITUTED ALPHA-KEGGIN BOUND TO PROTEINASE K SOLVED BY MR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEINASE K; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENDOPEPTIDASE K,TRITIRACHIUM ALKALINE PROTEINASE; COMPND 5 EC: 3.4.21.64 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARENGYODONTIUM ALBUM; SOURCE 3 ORGANISM_COMMON: TRITIRACHIUM ALBUM; SOURCE 4 ORGANISM_TAXID: 37998 KEYWDS POLYOXOMETALATE, COMPLEX, ALPHA-KEGGIN, PROTEINASE K, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.BREIBECK,A.BIJELIC,A.ROMPEL REVDAT 3 24-JAN-24 6RUH 1 REMARK LINK REVDAT 2 02-OCT-19 6RUH 1 JRNL REVDAT 1 18-SEP-19 6RUH 0 JRNL AUTH J.BREIBECK,A.BIJELIC,A.ROMPEL JRNL TITL TRANSITION METAL-SUBSTITUTED KEGGIN POLYOXOTUNGSTATES JRNL TITL 2 ENABLING COVALENT ATTACHMENT TO PROTEINASE K UPON JRNL TITL 3 CO-CRYSTALLIZATION. JRNL REF CHEM.COMMUN.(CAMB.) V. 55 11519 2019 JRNL REFN ESSN 1364-548X JRNL PMID 31490500 JRNL DOI 10.1039/C9CC05818D REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 184791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 9217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.5782 - 3.4166 1.00 5895 304 0.1664 0.1942 REMARK 3 2 3.4166 - 2.7124 1.00 5898 315 0.1538 0.1574 REMARK 3 3 2.7124 - 2.3697 1.00 5918 311 0.1510 0.1485 REMARK 3 4 2.3697 - 2.1531 1.00 5890 313 0.1462 0.1472 REMARK 3 5 2.1531 - 1.9988 1.00 5882 311 0.1417 0.1524 REMARK 3 6 1.9988 - 1.8810 1.00 5927 311 0.1391 0.1548 REMARK 3 7 1.8810 - 1.7868 1.00 5865 312 0.1380 0.1494 REMARK 3 8 1.7868 - 1.7090 1.00 5934 316 0.1365 0.1442 REMARK 3 9 1.7090 - 1.6432 1.00 5890 310 0.1340 0.1330 REMARK 3 10 1.6432 - 1.5865 1.00 5930 304 0.1320 0.1540 REMARK 3 11 1.5865 - 1.5369 1.00 5879 307 0.1292 0.1440 REMARK 3 12 1.5369 - 1.4930 1.00 5897 310 0.1317 0.1360 REMARK 3 13 1.4930 - 1.4537 1.00 5914 304 0.1315 0.1537 REMARK 3 14 1.4537 - 1.4182 1.00 5892 315 0.1339 0.1451 REMARK 3 15 1.4182 - 1.3860 1.00 5893 311 0.1372 0.1352 REMARK 3 16 1.3860 - 1.3565 1.00 5896 309 0.1380 0.1516 REMARK 3 17 1.3565 - 1.3293 1.00 5913 315 0.1423 0.1646 REMARK 3 18 1.3293 - 1.3043 1.00 5912 314 0.1450 0.1532 REMARK 3 19 1.3043 - 1.2810 1.00 5847 306 0.1491 0.1605 REMARK 3 20 1.2810 - 1.2592 1.00 5922 309 0.1467 0.1807 REMARK 3 21 1.2592 - 1.2389 1.00 5927 309 0.1464 0.1562 REMARK 3 22 1.2389 - 1.2199 1.00 5904 312 0.1460 0.1626 REMARK 3 23 1.2199 - 1.2019 1.00 5908 308 0.1451 0.1778 REMARK 3 24 1.2019 - 1.1850 1.00 5904 309 0.1486 0.1664 REMARK 3 25 1.1850 - 1.1690 1.00 5893 306 0.1493 0.1673 REMARK 3 26 1.1690 - 1.1538 0.99 5842 304 0.1570 0.1621 REMARK 3 27 1.1538 - 1.1394 0.97 5759 304 0.1633 0.1761 REMARK 3 28 1.1394 - 1.1257 0.96 5661 290 0.1747 0.1841 REMARK 3 29 1.1257 - 1.1126 0.94 5542 291 0.1790 0.1916 REMARK 3 30 1.1126 - 1.1001 0.88 5240 277 0.1848 0.1891 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2246 REMARK 3 ANGLE : 1.541 3304 REMARK 3 CHIRALITY : 0.080 317 REMARK 3 PLANARITY : 0.007 376 REMARK 3 DIHEDRAL : 12.236 740 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6RUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1292102619. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 184806 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.21970 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1IC6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE (PH 5.5), 0.7 REMARK 280 -1.2 M AMMONIUM SULPHATE, 5 MM NI-SUBSITUTED ALPHA-KEGGIN, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.33500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.98000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.00250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.98000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.66750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.98000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.00250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.98000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.66750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.33500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 542 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 688 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 34 HG CYS A 123 0.87 REMARK 500 HH TYR A 61 O HOH A 404 1.47 REMARK 500 HG CYS A 178 SG CYS A 249 1.51 REMARK 500 OD2 ASP A 207 NI1 WNI A 301 1.54 REMARK 500 HH22 ARG A 250 O HOH A 405 1.57 REMARK 500 OH TYR A 186 O58 WNI A 301 1.81 REMARK 500 O48 WNI A 302 O HOH A 401 1.83 REMARK 500 O HOH A 510 O HOH A 576 1.84 REMARK 500 O HOH A 442 O HOH A 573 1.85 REMARK 500 O HOH A 737 O HOH A 739 1.85 REMARK 500 O HOH A 721 O HOH A 745 1.90 REMARK 500 O HOH A 409 O HOH A 598 1.95 REMARK 500 O HOH A 575 O HOH A 711 1.97 REMARK 500 O HOH A 411 O HOH A 560 2.06 REMARK 500 O HOH A 554 O HOH A 642 2.07 REMARK 500 O58 WNI A 302 O HOH A 402 2.10 REMARK 500 O70 WNI A 302 O HOH A 403 2.11 REMARK 500 OH TYR A 61 O HOH A 404 2.11 REMARK 500 O HOH A 656 O HOH A 672 2.13 REMARK 500 O63 WNI A 302 O HOH A 403 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 443 O HOH A 525 3644 1.62 REMARK 500 O HOH A 457 O HOH A 654 6465 1.78 REMARK 500 NE2 GLN A 54 OE1 GLN A 278 6465 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 -146.35 -168.51 REMARK 500 ASP A 207 61.54 63.54 REMARK 500 ASN A 270 75.93 -111.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WNI A 302 W14 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 401 O REMARK 620 2 WNI A 302 O43 89.2 REMARK 620 3 WNI A 302 O47 128.3 88.6 REMARK 620 4 WNI A 302 O48 29.5 102.2 101.7 REMARK 620 5 WNI A 302 O49 80.1 81.7 150.0 108.1 REMARK 620 6 WNI A 302 O59 152.9 71.5 71.6 170.6 78.4 REMARK 620 7 WNI A 302 O63 111.2 155.5 88.8 102.2 88.6 84.6 REMARK 620 8 HOH A 403 O 71.7 152.2 118.9 71.0 75.5 117.8 40.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WNI A 302 W19 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 402 O REMARK 620 2 WNI A 302 O46 143.5 REMARK 620 3 WNI A 302 O47 77.4 84.8 REMARK 620 4 WNI A 302 O57 117.8 90.0 157.1 REMARK 620 5 WNI A 302 O58 52.2 101.7 100.8 102.1 REMARK 620 6 WNI A 302 O59 131.8 70.7 74.1 83.2 170.9 REMARK 620 7 WNI A 302 O68 55.9 156.4 89.7 86.2 101.9 85.7 REMARK 620 8 HOH A 411 O 69.3 74.3 62.2 137.3 46.0 125.5 122.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WNI A 302 W20 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 403 O REMARK 620 2 WNI A 302 O62 132.8 REMARK 620 3 WNI A 302 O63 55.3 83.9 REMARK 620 4 WNI A 302 O64 69.8 84.3 83.5 REMARK 620 5 WNI A 302 O69 123.4 70.8 87.7 154.3 REMARK 620 6 WNI A 302 O70 55.2 171.1 101.0 103.5 101.8 REMARK 620 7 WNI A 302 O71 143.0 72.0 155.6 90.0 88.2 103.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WNI A 302 NI1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 476 O REMARK 620 2 WNI A 302 O61 159.3 REMARK 620 3 WNI A 302 O75 104.4 87.6 REMARK 620 4 WNI A 302 O76 107.7 89.2 88.0 REMARK 620 5 WNI A 302 O77 93.5 73.5 161.1 92.1 REMARK 620 6 WNI A 302 O78 91.3 72.2 87.2 161.0 86.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WNI A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WNI A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6RUG RELATED DB: PDB DBREF 6RUH A 1 279 UNP P06873 PRTK_PARAQ 106 384 SEQADV 6RUH ASP A 207 UNP P06873 SER 312 CONFLICT SEQRES 1 A 279 ALA ALA GLN THR ASN ALA PRO TRP GLY LEU ALA ARG ILE SEQRES 2 A 279 SER SER THR SER PRO GLY THR SER THR TYR TYR TYR ASP SEQRES 3 A 279 GLU SER ALA GLY GLN GLY SER CYS VAL TYR VAL ILE ASP SEQRES 4 A 279 THR GLY ILE GLU ALA SER HIS PRO GLU PHE GLU GLY ARG SEQRES 5 A 279 ALA GLN MET VAL LYS THR TYR TYR TYR SER SER ARG ASP SEQRES 6 A 279 GLY ASN GLY HIS GLY THR HIS CYS ALA GLY THR VAL GLY SEQRES 7 A 279 SER ARG THR TYR GLY VAL ALA LYS LYS THR GLN LEU PHE SEQRES 8 A 279 GLY VAL LYS VAL LEU ASP ASP ASN GLY SER GLY GLN TYR SEQRES 9 A 279 SER THR ILE ILE ALA GLY MET ASP PHE VAL ALA SER ASP SEQRES 10 A 279 LYS ASN ASN ARG ASN CYS PRO LYS GLY VAL VAL ALA SER SEQRES 11 A 279 LEU SER LEU GLY GLY GLY TYR SER SER SER VAL ASN SER SEQRES 12 A 279 ALA ALA ALA ARG LEU GLN SER SER GLY VAL MET VAL ALA SEQRES 13 A 279 VAL ALA ALA GLY ASN ASN ASN ALA ASP ALA ARG ASN TYR SEQRES 14 A 279 SER PRO ALA SER GLU PRO SER VAL CYS THR VAL GLY ALA SEQRES 15 A 279 SER ASP ARG TYR ASP ARG ARG SER SER PHE SER ASN TYR SEQRES 16 A 279 GLY SER VAL LEU ASP ILE PHE GLY PRO GLY THR ASP ILE SEQRES 17 A 279 LEU SER THR TRP ILE GLY GLY SER THR ARG SER ILE SER SEQRES 18 A 279 GLY THR SER MET ALA THR PRO HIS VAL ALA GLY LEU ALA SEQRES 19 A 279 ALA TYR LEU MET THR LEU GLY LYS THR THR ALA ALA SER SEQRES 20 A 279 ALA CYS ARG TYR ILE ALA ASP THR ALA ASN LYS GLY ASP SEQRES 21 A 279 LEU SER ASN ILE PRO PHE GLY THR VAL ASN LEU LEU ALA SEQRES 22 A 279 TYR ASN ASN TYR GLN ALA HET WNI A 301 52 HET WNI A 302 52 HET SO4 A 303 5 HETNAM WNI NI-SUBSTITUTED ALPHA-KEGGIN HETNAM SO4 SULFATE ION FORMUL 2 WNI 2(NI O39 P W11) FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *349(H2 O) HELIX 1 AA1 PRO A 7 SER A 14 1 8 HELIX 2 AA2 HIS A 46 GLU A 50 5 5 HELIX 3 AA3 GLY A 68 SER A 79 1 12 HELIX 4 AA4 GLN A 103 LYS A 118 1 16 HELIX 5 AA5 ASN A 119 ARG A 121 5 3 HELIX 6 AA6 SER A 138 SER A 151 1 14 HELIX 7 AA7 ASP A 165 ARG A 167 5 3 HELIX 8 AA8 GLY A 222 LEU A 240 1 19 HELIX 9 AA9 SER A 247 ALA A 256 1 10 SHEET 1 AA1 2 ALA A 2 GLN A 3 0 SHEET 2 AA1 2 TYR A 23 TYR A 24 -1 O TYR A 23 N GLN A 3 SHEET 1 AA2 7 ALA A 53 THR A 58 0 SHEET 2 AA2 7 GLN A 89 LYS A 94 1 O LYS A 94 N LYS A 57 SHEET 3 AA2 7 SER A 33 ASP A 39 1 N VAL A 35 O GLN A 89 SHEET 4 AA2 7 GLY A 126 LEU A 131 1 O SER A 130 N TYR A 36 SHEET 5 AA2 7 MET A 154 ALA A 158 1 O MET A 154 N ALA A 129 SHEET 6 AA2 7 CYS A 178 SER A 183 1 O VAL A 180 N VAL A 157 SHEET 7 AA2 7 ILE A 201 PRO A 204 1 O ILE A 201 N GLY A 181 SHEET 1 AA3 2 GLY A 135 GLY A 136 0 SHEET 2 AA3 2 TYR A 169 SER A 170 -1 O SER A 170 N GLY A 135 SHEET 1 AA4 2 ILE A 208 TRP A 212 0 SHEET 2 AA4 2 SER A 216 ILE A 220 -1 O ILE A 220 N ILE A 208 SHEET 1 AA5 2 ASN A 257 LYS A 258 0 SHEET 2 AA5 2 LEU A 271 LEU A 272 -1 O LEU A 272 N ASN A 257 SSBOND 1 CYS A 34 CYS A 123 1555 1555 2.04 SSBOND 2 CYS A 178 CYS A 249 1555 1555 2.11 LINK W14 WNI A 302 O HOH A 401 1555 1555 3.13 LINK W19 WNI A 302 O HOH A 402 1555 1555 2.65 LINK W14 WNI A 302 O HOH A 403 1555 1555 3.22 LINK W20 WNI A 302 O HOH A 403 1555 1555 2.55 LINK W19 WNI A 302 O HOH A 411 1555 1555 3.26 LINK NI1 WNI A 302 O HOH A 476 1555 1555 2.13 CISPEP 1 SER A 170 PRO A 171 0 1.72 SITE 1 AC1 14 SER A 140 ASP A 184 ARG A 185 TYR A 186 SITE 2 AC1 14 ARG A 188 THR A 206 ASP A 207 THR A 244 SITE 3 AC1 14 ALA A 245 ALA A 246 HOH A 484 HOH A 568 SITE 4 AC1 14 HOH A 628 HOH A 661 SITE 1 AC2 26 ILE A 42 GLU A 43 ALA A 44 SER A 45 SITE 2 AC2 26 GLN A 54 MET A 55 SER A 63 ARG A 64 SITE 3 AC2 26 LYS A 258 GLY A 259 ASN A 270 HOH A 401 SITE 4 AC2 26 HOH A 402 HOH A 403 HOH A 411 HOH A 469 SITE 5 AC2 26 HOH A 476 HOH A 510 HOH A 541 HOH A 553 SITE 6 AC2 26 HOH A 560 HOH A 569 HOH A 576 HOH A 583 SITE 7 AC2 26 HOH A 584 HOH A 647 SITE 1 AC3 6 PRO A 7 TRP A 8 ARG A 185 HOH A 461 SITE 2 AC3 6 HOH A 488 HOH A 597 CRYST1 67.960 67.960 102.670 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014715 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009740 0.00000