HEADER CHAPERONE 13-JUN-19 6S02 TITLE PLASMODIUM FALCIPARUM HSP70-X CHAPERONE NUCLEOTIDE BINDING DOMAIN - TITLE 2 ADP BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN 70; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HSP70-X; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE 3D7); SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PF3D7_0831700; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MALARIA EXPORTED CHAPERONE INTRA-ERYTHROCYTIC ADP, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR I.VAKONAKIS,J.DAY REVDAT 5 13-NOV-24 6S02 1 SPRSDE REVDAT 4 24-JAN-24 6S02 1 LINK REVDAT 3 11-DEC-19 6S02 1 JRNL REVDAT 2 13-NOV-19 6S02 1 JRNL REVDAT 1 02-OCT-19 6S02 0 SPRSDE 13-NOV-24 6S02 7NQT JRNL AUTH J.DAY,A.PASSECKER,H.P.BECK,I.VAKONAKIS JRNL TITL THEPLASMODIUM FALCIPARUMHSP70-X CHAPERONE ASSISTS THE HEAT JRNL TITL 2 STRESS RESPONSE OF THE MALARIA PARASITE. JRNL REF FASEB J. V. 33 14611 2019 JRNL REFN ESSN 1530-6860 JRNL PMID 31690116 JRNL DOI 10.1096/FJ.201901741R REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 69598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 3386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 72.5645 - 5.3928 0.99 2992 147 0.1849 0.2028 REMARK 3 2 5.3928 - 4.2806 1.00 2870 160 0.1618 0.2087 REMARK 3 3 4.2806 - 3.7395 1.00 2824 157 0.1739 0.2172 REMARK 3 4 3.7395 - 3.3976 1.00 2791 175 0.1970 0.2208 REMARK 3 5 3.3976 - 3.1541 1.00 2804 146 0.2244 0.2209 REMARK 3 6 3.1541 - 2.9681 0.99 2784 123 0.2224 0.2604 REMARK 3 7 2.9681 - 2.8195 1.00 2821 143 0.2290 0.2877 REMARK 3 8 2.8195 - 2.6967 0.99 2767 148 0.2234 0.2571 REMARK 3 9 2.6967 - 2.5929 0.99 2747 139 0.2302 0.2181 REMARK 3 10 2.5929 - 2.5034 0.99 2770 138 0.2394 0.2616 REMARK 3 11 2.5034 - 2.4251 0.99 2720 170 0.2390 0.2665 REMARK 3 12 2.4251 - 2.3558 0.99 2746 142 0.2454 0.3296 REMARK 3 13 2.3558 - 2.2938 0.99 2779 120 0.2520 0.3019 REMARK 3 14 2.2938 - 2.2378 0.99 2738 158 0.2736 0.2839 REMARK 3 15 2.2378 - 2.1870 0.99 2776 140 0.2679 0.3359 REMARK 3 16 2.1870 - 2.1404 0.99 2752 112 0.2768 0.2979 REMARK 3 17 2.1404 - 2.0976 0.99 2763 114 0.2813 0.3116 REMARK 3 18 2.0976 - 2.0580 0.99 2718 161 0.3024 0.2754 REMARK 3 19 2.0580 - 2.0213 0.99 2721 144 0.3134 0.3599 REMARK 3 20 2.0213 - 1.9870 0.98 2732 118 0.3426 0.3956 REMARK 3 21 1.9870 - 1.9549 0.98 2701 133 0.3656 0.4241 REMARK 3 22 1.9549 - 1.9249 0.97 2712 128 0.3836 0.3965 REMARK 3 23 1.9249 - 1.8965 0.96 2619 136 0.4112 0.4198 REMARK 3 24 1.8965 - 1.8698 0.93 2565 134 0.4387 0.4312 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5909 REMARK 3 ANGLE : 0.690 7976 REMARK 3 CHIRALITY : 0.052 910 REMARK 3 PLANARITY : 0.004 1034 REMARK 3 DIHEDRAL : 10.445 3594 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0010 64.5679 55.3315 REMARK 3 T TENSOR REMARK 3 T11: 0.2750 T22: 0.3093 REMARK 3 T33: 0.2841 T12: 0.0242 REMARK 3 T13: 0.0151 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 3.6730 L22: 1.8171 REMARK 3 L33: 2.9814 L12: -0.2622 REMARK 3 L13: -0.4002 L23: 0.4543 REMARK 3 S TENSOR REMARK 3 S11: -0.1044 S12: -0.3498 S13: -0.4411 REMARK 3 S21: 0.2537 S22: 0.0242 S23: -0.0171 REMARK 3 S31: 0.5015 S32: 0.0726 S33: 0.0303 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2833 74.6055 42.1681 REMARK 3 T TENSOR REMARK 3 T11: 0.2042 T22: 0.4040 REMARK 3 T33: 0.2203 T12: 0.0028 REMARK 3 T13: 0.0127 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 2.7490 L22: 3.4430 REMARK 3 L33: 1.4270 L12: -0.5862 REMARK 3 L13: -0.6570 L23: 0.1326 REMARK 3 S TENSOR REMARK 3 S11: 0.0862 S12: 0.2351 S13: -0.0583 REMARK 3 S21: -0.2846 S22: -0.0744 S23: 0.0097 REMARK 3 S31: 0.0288 S32: 0.0193 S33: -0.0055 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6825 82.3549 29.9044 REMARK 3 T TENSOR REMARK 3 T11: 0.7790 T22: 0.7420 REMARK 3 T33: 0.5083 T12: 0.1491 REMARK 3 T13: -0.1746 T23: -0.1044 REMARK 3 L TENSOR REMARK 3 L11: 4.4940 L22: 5.7787 REMARK 3 L33: 0.1379 L12: 5.0890 REMARK 3 L13: 0.4361 L23: 0.5362 REMARK 3 S TENSOR REMARK 3 S11: 0.1769 S12: 2.1150 S13: 0.3398 REMARK 3 S21: -2.1128 S22: 0.1249 S23: 0.9103 REMARK 3 S31: -0.3537 S32: -0.6936 S33: -0.1512 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9591 86.9881 61.4096 REMARK 3 T TENSOR REMARK 3 T11: 0.1966 T22: 0.4698 REMARK 3 T33: 0.2956 T12: 0.0086 REMARK 3 T13: 0.0075 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 2.4639 L22: 1.8842 REMARK 3 L33: 4.4779 L12: -0.6659 REMARK 3 L13: 0.6332 L23: -0.0393 REMARK 3 S TENSOR REMARK 3 S11: -0.0866 S12: -0.4737 S13: 0.0837 REMARK 3 S21: 0.2740 S22: 0.1814 S23: -0.2235 REMARK 3 S31: -0.0580 S32: 0.3258 S33: -0.0403 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.2182 66.2249 16.4530 REMARK 3 T TENSOR REMARK 3 T11: 0.2863 T22: 0.3011 REMARK 3 T33: 0.2495 T12: -0.0620 REMARK 3 T13: 0.0094 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 4.6740 L22: 2.3935 REMARK 3 L33: 4.4652 L12: -0.8814 REMARK 3 L13: -2.2031 L23: 0.5104 REMARK 3 S TENSOR REMARK 3 S11: -0.0274 S12: -0.2763 S13: 0.0732 REMARK 3 S21: -0.0893 S22: 0.1524 S23: -0.1305 REMARK 3 S31: -0.2199 S32: 0.4539 S33: -0.1189 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9453 59.8776 3.5920 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.4464 REMARK 3 T33: 0.2979 T12: -0.0499 REMARK 3 T13: 0.1082 T23: -0.1038 REMARK 3 L TENSOR REMARK 3 L11: 7.0559 L22: 4.2494 REMARK 3 L33: 7.1414 L12: -0.5431 REMARK 3 L13: -0.3904 L23: 0.6651 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: 0.6593 S13: -0.2835 REMARK 3 S21: -0.6003 S22: -0.0174 S23: -0.0565 REMARK 3 S31: 0.0398 S32: 0.8822 S33: -0.0818 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 124 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9432 67.5932 14.7935 REMARK 3 T TENSOR REMARK 3 T11: 0.2588 T22: 0.3220 REMARK 3 T33: 0.2219 T12: 0.0026 REMARK 3 T13: 0.0000 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 2.4989 L22: 3.0657 REMARK 3 L33: 2.5275 L12: -1.0151 REMARK 3 L13: -0.3995 L23: 0.6393 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: 0.1273 S13: -0.0601 REMARK 3 S21: -0.2909 S22: -0.0396 S23: 0.4121 REMARK 3 S31: -0.2073 S32: -0.3420 S33: 0.0292 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 359 THROUGH 394 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5223 82.0348 45.9824 REMARK 3 T TENSOR REMARK 3 T11: 0.1752 T22: 0.4946 REMARK 3 T33: 0.2450 T12: 0.0482 REMARK 3 T13: -0.0233 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 2.0880 L22: 5.3513 REMARK 3 L33: 0.8999 L12: 1.2299 REMARK 3 L13: -1.3284 L23: -0.2951 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: 0.3432 S13: -0.0142 REMARK 3 S21: -0.3136 S22: -0.1362 S23: 0.3499 REMARK 3 S31: -0.1173 S32: -0.3271 S33: 0.1277 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 225 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.9630 87.7906 14.0878 REMARK 3 T TENSOR REMARK 3 T11: 0.7045 T22: 0.4586 REMARK 3 T33: 0.3666 T12: -0.0431 REMARK 3 T13: 0.0079 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 3.2262 L22: 1.3545 REMARK 3 L33: 2.2493 L12: -0.1242 REMARK 3 L13: 0.1335 L23: -0.4886 REMARK 3 S TENSOR REMARK 3 S11: -0.1090 S12: 0.1604 S13: 0.2103 REMARK 3 S21: -0.0710 S22: -0.0907 S23: -0.2249 REMARK 3 S31: -0.5556 S32: 0.5856 S33: 0.1777 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 363 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2905 76.7713 22.0877 REMARK 3 T TENSOR REMARK 3 T11: 0.4199 T22: 0.4728 REMARK 3 T33: 0.3607 T12: 0.1356 REMARK 3 T13: 0.0907 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.9500 L22: 2.7710 REMARK 3 L33: 2.4976 L12: 0.2801 REMARK 3 L13: 0.1926 L23: -0.0947 REMARK 3 S TENSOR REMARK 3 S11: 0.1651 S12: 0.2092 S13: 0.1465 REMARK 3 S21: -0.0154 S22: -0.0326 S23: 0.4141 REMARK 3 S31: -0.5480 S32: -0.5078 S33: 0.0166 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292102899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 72.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6RZQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES 5% W/V PEG 3,000 30% V/V PEG REMARK 280 200, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.05750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.65500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.89800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.65500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.05750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.89800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 27 REMARK 465 PRO A 28 REMARK 465 ALA A 29 REMARK 465 GLU A 30 REMARK 465 GLU A 31 REMARK 465 SER A 32 REMARK 465 GLU A 33 REMARK 465 ASP A 216 REMARK 465 LYS A 217 REMARK 465 LYS A 218 REMARK 465 GLY A 219 REMARK 465 LYS A 220 REMARK 465 SER A 417 REMARK 465 ALA A 418 REMARK 465 VAL A 419 REMARK 465 GLY B 27 REMARK 465 PRO B 28 REMARK 465 ALA B 29 REMARK 465 GLU B 30 REMARK 465 GLU B 31 REMARK 465 LYS B 217 REMARK 465 LYS B 218 REMARK 465 GLY B 219 REMARK 465 LYS B 220 REMARK 465 LYS B 282 REMARK 465 ASP B 283 REMARK 465 VAL B 284 REMARK 465 SER B 285 REMARK 465 GLN B 415 REMARK 465 SER B 416 REMARK 465 SER B 417 REMARK 465 ALA B 418 REMARK 465 VAL B 419 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 373 O HOH A 503 1.50 REMARK 500 O HOH A 645 O HOH A 653 2.07 REMARK 500 O HOH B 584 O HOH B 594 2.11 REMARK 500 O HOH A 643 O HOH A 646 2.11 REMARK 500 O HOH A 591 O HOH A 634 2.11 REMARK 500 O2B ADP A 450 O HOH A 501 2.13 REMARK 500 O1B ADP B 450 O HOH B 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 117 1.85 -62.53 REMARK 500 LYS A 170 -36.66 -130.37 REMARK 500 ARG A 201 142.72 -173.89 REMARK 500 ASP A 320 -133.18 57.10 REMARK 500 THR B 74 -168.50 -119.78 REMARK 500 PHE B 319 -79.92 -105.18 REMARK 500 ASP B 320 62.38 -111.17 REMARK 500 LYS B 392 4.60 -152.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 451 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 39 OD2 REMARK 620 2 TYR A 44 O 110.5 REMARK 620 3 ADP A 450 O1B 119.5 120.9 REMARK 620 4 HOH A 525 O 76.8 169.0 58.5 REMARK 620 5 HOH A 599 O 86.6 88.5 122.4 83.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 452 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 39 OD2 REMARK 620 2 ADP B 450 O3B 156.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 452 DBREF 6S02 A 29 419 UNP K7NTP5 K7NTP5_PLAF7 29 419 DBREF 6S02 B 29 419 UNP K7NTP5 K7NTP5_PLAF7 29 419 SEQADV 6S02 GLY A 27 UNP K7NTP5 EXPRESSION TAG SEQADV 6S02 PRO A 28 UNP K7NTP5 EXPRESSION TAG SEQADV 6S02 GLY B 27 UNP K7NTP5 EXPRESSION TAG SEQADV 6S02 PRO B 28 UNP K7NTP5 EXPRESSION TAG SEQRES 1 A 393 GLY PRO ALA GLU GLU SER GLU VAL ALA ILE GLY ILE ASP SEQRES 2 A 393 LEU GLY THR THR TYR SER CYS VAL GLY ILE CYS ARG ASN SEQRES 3 A 393 GLY VAL VAL ASP ILE ILE ALA ASN ASP GLN GLY ASN ARG SEQRES 4 A 393 THR THR PRO SER TYR VAL ALA PHE THR ASP THR GLU ARG SEQRES 5 A 393 LEU ILE GLY ASP ALA ALA LYS ASN GLN ALA SER ARG ASN SEQRES 6 A 393 PRO GLU ASN THR VAL PHE ASP ALA LYS ARG LEU ILE GLY SEQRES 7 A 393 ARG LYS PHE SER GLU THR THR VAL GLN SER ASP MET LYS SEQRES 8 A 393 HIS TRP PRO PHE THR VAL LYS GLY GLY SER ASP GLY LYS SEQRES 9 A 393 PRO MET ILE GLU VAL SER TYR GLN GLY GLU LYS LYS THR SEQRES 10 A 393 PHE HIS PRO GLU GLU ILE SER SER MET VAL LEU LYS LYS SEQRES 11 A 393 MET LYS GLU VAL ALA GLU THR TYR LEU GLY LYS PRO VAL SEQRES 12 A 393 LYS ASN ALA VAL ILE THR VAL PRO ALA TYR PHE ASN ASP SEQRES 13 A 393 SER GLN ARG GLN ALA THR LYS ASP ALA GLY ALA ILE ALA SEQRES 14 A 393 GLY LEU ASN VAL LEU ARG ILE ILE ASN GLU PRO THR ALA SEQRES 15 A 393 ALA ALA ILE ALA TYR GLY LEU ASP LYS LYS GLY LYS GLY SEQRES 16 A 393 GLU GLN ASN ILE LEU ILE PHE ASP LEU GLY GLY GLY THR SEQRES 17 A 393 PHE ASP VAL SER LEU LEU THR LEU GLU ASP GLY ILE PHE SEQRES 18 A 393 GLU VAL LYS ALA THR SER GLY ASP THR HIS LEU GLY GLY SEQRES 19 A 393 GLU ASP PHE ASP ASN LYS LEU VAL ASN PHE CYS VAL GLN SEQRES 20 A 393 ASP PHE LYS LYS LYS ASN GLY GLY LYS ASP VAL SER LYS SEQRES 21 A 393 ASN SER LYS SER LEU ARG ARG LEU ARG THR GLN CYS GLU SEQRES 22 A 393 LYS ALA LYS ARG VAL LEU SER SER SER ALA GLN ALA THR SEQRES 23 A 393 ILE GLU VAL ASP SER LEU PHE ASP GLY ILE ASP TYR ASN SEQRES 24 A 393 VAL ASN ILE THR ARG ALA LYS PHE GLU GLU LEU CYS MET SEQRES 25 A 393 ASP GLN PHE ARG ASN THR LEU ILE PRO VAL GLU LYS VAL SEQRES 26 A 393 LEU LYS ASP ALA LYS MET ASP LYS SER GLN VAL HIS GLU SEQRES 27 A 393 ILE VAL LEU VAL GLY GLY SER THR ARG ILE PRO LYS ILE SEQRES 28 A 393 GLN GLN LEU ILE LYS ASP PHE PHE ASN GLY LYS GLU PRO SEQRES 29 A 393 CYS LYS ALA ILE ASN PRO ASP GLU ALA VAL ALA TYR GLY SEQRES 30 A 393 ALA ALA VAL GLN ALA ALA ILE LEU SER GLY ASP GLN SER SEQRES 31 A 393 SER ALA VAL SEQRES 1 B 393 GLY PRO ALA GLU GLU SER GLU VAL ALA ILE GLY ILE ASP SEQRES 2 B 393 LEU GLY THR THR TYR SER CYS VAL GLY ILE CYS ARG ASN SEQRES 3 B 393 GLY VAL VAL ASP ILE ILE ALA ASN ASP GLN GLY ASN ARG SEQRES 4 B 393 THR THR PRO SER TYR VAL ALA PHE THR ASP THR GLU ARG SEQRES 5 B 393 LEU ILE GLY ASP ALA ALA LYS ASN GLN ALA SER ARG ASN SEQRES 6 B 393 PRO GLU ASN THR VAL PHE ASP ALA LYS ARG LEU ILE GLY SEQRES 7 B 393 ARG LYS PHE SER GLU THR THR VAL GLN SER ASP MET LYS SEQRES 8 B 393 HIS TRP PRO PHE THR VAL LYS GLY GLY SER ASP GLY LYS SEQRES 9 B 393 PRO MET ILE GLU VAL SER TYR GLN GLY GLU LYS LYS THR SEQRES 10 B 393 PHE HIS PRO GLU GLU ILE SER SER MET VAL LEU LYS LYS SEQRES 11 B 393 MET LYS GLU VAL ALA GLU THR TYR LEU GLY LYS PRO VAL SEQRES 12 B 393 LYS ASN ALA VAL ILE THR VAL PRO ALA TYR PHE ASN ASP SEQRES 13 B 393 SER GLN ARG GLN ALA THR LYS ASP ALA GLY ALA ILE ALA SEQRES 14 B 393 GLY LEU ASN VAL LEU ARG ILE ILE ASN GLU PRO THR ALA SEQRES 15 B 393 ALA ALA ILE ALA TYR GLY LEU ASP LYS LYS GLY LYS GLY SEQRES 16 B 393 GLU GLN ASN ILE LEU ILE PHE ASP LEU GLY GLY GLY THR SEQRES 17 B 393 PHE ASP VAL SER LEU LEU THR LEU GLU ASP GLY ILE PHE SEQRES 18 B 393 GLU VAL LYS ALA THR SER GLY ASP THR HIS LEU GLY GLY SEQRES 19 B 393 GLU ASP PHE ASP ASN LYS LEU VAL ASN PHE CYS VAL GLN SEQRES 20 B 393 ASP PHE LYS LYS LYS ASN GLY GLY LYS ASP VAL SER LYS SEQRES 21 B 393 ASN SER LYS SER LEU ARG ARG LEU ARG THR GLN CYS GLU SEQRES 22 B 393 LYS ALA LYS ARG VAL LEU SER SER SER ALA GLN ALA THR SEQRES 23 B 393 ILE GLU VAL ASP SER LEU PHE ASP GLY ILE ASP TYR ASN SEQRES 24 B 393 VAL ASN ILE THR ARG ALA LYS PHE GLU GLU LEU CYS MET SEQRES 25 B 393 ASP GLN PHE ARG ASN THR LEU ILE PRO VAL GLU LYS VAL SEQRES 26 B 393 LEU LYS ASP ALA LYS MET ASP LYS SER GLN VAL HIS GLU SEQRES 27 B 393 ILE VAL LEU VAL GLY GLY SER THR ARG ILE PRO LYS ILE SEQRES 28 B 393 GLN GLN LEU ILE LYS ASP PHE PHE ASN GLY LYS GLU PRO SEQRES 29 B 393 CYS LYS ALA ILE ASN PRO ASP GLU ALA VAL ALA TYR GLY SEQRES 30 B 393 ALA ALA VAL GLN ALA ALA ILE LEU SER GLY ASP GLN SER SEQRES 31 B 393 SER ALA VAL HET ADP A 450 38 HET MG A 451 1 HET ADP B 450 39 HET MG B 452 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *287(H2 O) HELIX 1 AA1 GLY A 81 GLN A 87 1 7 HELIX 2 AA2 ALA A 88 GLU A 93 5 6 HELIX 3 AA3 ASP A 98 LEU A 102 5 5 HELIX 4 AA4 GLU A 109 MET A 116 1 8 HELIX 5 AA5 LYS A 117 TRP A 119 5 3 HELIX 6 AA6 HIS A 145 GLY A 166 1 22 HELIX 7 AA7 ASN A 181 ALA A 195 1 15 HELIX 8 AA8 GLU A 205 TYR A 213 1 9 HELIX 9 AA9 GLY A 259 ASN A 279 1 21 HELIX 10 AB1 ASP A 283 LYS A 286 5 4 HELIX 11 AB2 ASN A 287 SER A 306 1 20 HELIX 12 AB3 ARG A 330 THR A 344 1 15 HELIX 13 AB4 THR A 344 ALA A 355 1 12 HELIX 14 AB5 ASP A 358 VAL A 362 5 5 HELIX 15 AB6 GLY A 369 ARG A 373 5 5 HELIX 16 AB7 ILE A 374 PHE A 385 1 12 HELIX 17 AB8 GLU A 398 LEU A 411 1 14 HELIX 18 AB9 GLY B 81 GLN B 87 1 7 HELIX 19 AC1 ASN B 91 GLU B 93 5 3 HELIX 20 AC2 ASP B 98 LEU B 102 5 5 HELIX 21 AC3 GLU B 109 LYS B 117 1 9 HELIX 22 AC4 HIS B 145 GLY B 166 1 22 HELIX 23 AC5 ASN B 181 ALA B 195 1 15 HELIX 24 AC6 GLU B 205 TYR B 213 1 9 HELIX 25 AC7 GLY B 259 GLY B 280 1 22 HELIX 26 AC8 ASN B 287 SER B 306 1 20 HELIX 27 AC9 ARG B 330 CYS B 337 1 8 HELIX 28 AD1 CYS B 337 THR B 344 1 8 HELIX 29 AD2 THR B 344 ALA B 355 1 12 HELIX 30 AD3 ASP B 358 VAL B 362 5 5 HELIX 31 AD4 GLY B 369 ARG B 373 5 5 HELIX 32 AD5 ILE B 374 PHE B 385 1 12 HELIX 33 AD6 GLU B 398 SER B 412 1 15 SHEET 1 AA1 3 VAL A 54 ILE A 57 0 SHEET 2 AA1 3 TYR A 44 ARG A 51 -1 N ILE A 49 O ASP A 56 SHEET 3 AA1 3 THR A 67 PRO A 68 -1 O THR A 67 N SER A 45 SHEET 1 AA2 5 VAL A 54 ILE A 57 0 SHEET 2 AA2 5 TYR A 44 ARG A 51 -1 N ILE A 49 O ASP A 56 SHEET 3 AA2 5 ALA A 35 ASP A 39 -1 N ASP A 39 O CYS A 46 SHEET 4 AA2 5 ASN A 171 VAL A 176 1 O VAL A 173 N ILE A 38 SHEET 5 AA2 5 ASN A 198 ASN A 204 1 O LEU A 200 N ALA A 172 SHEET 1 AA3 3 ARG A 78 ILE A 80 0 SHEET 2 AA3 3 VAL A 71 PHE A 73 -1 N ALA A 72 O LEU A 79 SHEET 3 AA3 3 THR A 95 VAL A 96 -1 O VAL A 96 N VAL A 71 SHEET 1 AA4 3 THR A 122 GLY A 125 0 SHEET 2 AA4 3 PRO A 131 TYR A 137 -1 O MET A 132 N LYS A 124 SHEET 3 AA4 3 GLU A 140 PHE A 144 -1 O GLU A 140 N TYR A 137 SHEET 1 AA5 4 ILE A 246 ASP A 255 0 SHEET 2 AA5 4 PHE A 235 GLU A 243 -1 N VAL A 237 O SER A 253 SHEET 3 AA5 4 GLN A 223 LEU A 230 -1 N ILE A 225 O LEU A 240 SHEET 4 AA5 4 GLU A 364 VAL A 368 1 O VAL A 366 N PHE A 228 SHEET 1 AA6 2 GLN A 310 PHE A 319 0 SHEET 2 AA6 2 ILE A 322 THR A 329 -1 O ILE A 328 N ALA A 311 SHEET 1 AA7 3 VAL B 54 ILE B 57 0 SHEET 2 AA7 3 TYR B 44 ARG B 51 -1 N ILE B 49 O ASP B 56 SHEET 3 AA7 3 THR B 67 PRO B 68 -1 O THR B 67 N SER B 45 SHEET 1 AA8 5 VAL B 54 ILE B 57 0 SHEET 2 AA8 5 TYR B 44 ARG B 51 -1 N ILE B 49 O ASP B 56 SHEET 3 AA8 5 ILE B 36 ASP B 39 -1 N ASP B 39 O CYS B 46 SHEET 4 AA8 5 ASN B 171 VAL B 176 1 O VAL B 173 N ILE B 38 SHEET 5 AA8 5 ASN B 198 ASN B 204 1 O LEU B 200 N ALA B 172 SHEET 1 AA9 3 ARG B 78 ILE B 80 0 SHEET 2 AA9 3 VAL B 71 PHE B 73 -1 N ALA B 72 O LEU B 79 SHEET 3 AA9 3 THR B 95 VAL B 96 -1 O VAL B 96 N VAL B 71 SHEET 1 AB1 3 THR B 122 GLY B 125 0 SHEET 2 AB1 3 PRO B 131 TYR B 137 -1 O MET B 132 N LYS B 124 SHEET 3 AB1 3 GLU B 140 PHE B 144 -1 O PHE B 144 N ILE B 133 SHEET 1 AB2 4 ILE B 246 ASP B 255 0 SHEET 2 AB2 4 PHE B 235 GLU B 243 -1 N VAL B 237 O SER B 253 SHEET 3 AB2 4 ASN B 224 LEU B 230 -1 N ASP B 229 O ASP B 236 SHEET 4 AB2 4 GLU B 364 VAL B 368 1 O VAL B 368 N PHE B 228 SHEET 1 AB3 2 GLN B 310 VAL B 315 0 SHEET 2 AB3 2 TYR B 324 THR B 329 -1 O ILE B 328 N ALA B 311 LINK OD2 ASP A 39 MG MG A 451 1555 1555 2.91 LINK O TYR A 44 MG MG A 451 1555 1555 2.44 LINK O1B ADP A 450 MG MG A 451 1555 1555 2.30 LINK MG MG A 451 O HOH A 525 1555 1555 2.95 LINK MG MG A 451 O HOH A 599 1555 1555 2.42 LINK OD2 ASP B 39 MG MG B 452 1555 1555 2.78 LINK O3B ADP B 450 MG MG B 452 1555 1555 2.98 SITE 1 AC1 24 THR A 42 THR A 43 TYR A 44 GLY A 231 SITE 2 AC1 24 GLY A 232 GLY A 260 GLU A 299 LYS A 302 SITE 3 AC1 24 ARG A 303 SER A 306 GLY A 369 GLY A 370 SITE 4 AC1 24 SER A 371 ARG A 373 ILE A 374 ASP A 397 SITE 5 AC1 24 MG A 451 HOH A 501 HOH A 525 HOH A 526 SITE 6 AC1 24 HOH A 550 HOH A 575 HOH A 585 HOH A 603 SITE 1 AC2 5 ASP A 39 TYR A 44 ADP A 450 HOH A 525 SITE 2 AC2 5 HOH A 599 SITE 1 AC3 19 THR B 42 THR B 43 TYR B 44 GLY B 232 SITE 2 AC3 19 GLY B 260 GLU B 299 LYS B 302 ARG B 303 SITE 3 AC3 19 SER B 306 GLY B 369 GLY B 370 SER B 371 SITE 4 AC3 19 ARG B 373 ASP B 397 MG B 452 HOH B 501 SITE 5 AC3 19 HOH B 533 HOH B 542 HOH B 587 SITE 1 AC4 4 ASP B 39 TYR B 44 ADP B 450 HOH B 533 CRYST1 80.115 101.796 103.310 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012482 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009680 0.00000