HEADER HYDROLASE 21-JUN-19 6S2R TITLE MYCOBACTERIAL HYDROLASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MANNOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE; COMPND 5 EC: 3.1.3.85,3.1.3.70; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: GPGP, RV2419C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYCOBACTERIUM TUBERCULOSIS, HYDROLASE, PHOSPHATASE EXPDTA X-RAY DIFFRACTION AUTHOR T.B.CEREIJA,F.VILELA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 2 24-JAN-24 6S2R 1 LINK REVDAT 1 15-JUL-20 6S2R 0 JRNL AUTH T.B.CEREIJA,N.EMPADINHAS,S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL MYCOBACTERIAL HYDROLASE 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 75972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 3676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5334 - 4.2946 0.99 2926 127 0.1657 0.1721 REMARK 3 2 4.2946 - 3.4090 0.99 2825 149 0.1357 0.1705 REMARK 3 3 3.4090 - 2.9782 0.99 2825 159 0.1504 0.1555 REMARK 3 4 2.9782 - 2.7059 0.99 2791 147 0.1675 0.2092 REMARK 3 5 2.7059 - 2.5120 1.00 2794 153 0.1664 0.1865 REMARK 3 6 2.5120 - 2.3639 0.99 2793 157 0.1645 0.1936 REMARK 3 7 2.3639 - 2.2455 0.99 2796 132 0.1603 0.2023 REMARK 3 8 2.2455 - 2.1478 0.99 2793 141 0.1645 0.1909 REMARK 3 9 2.1478 - 2.0651 1.00 2816 133 0.1694 0.2063 REMARK 3 10 2.0651 - 1.9938 1.00 2811 137 0.1724 0.2078 REMARK 3 11 1.9938 - 1.9315 0.99 2760 147 0.1735 0.1925 REMARK 3 12 1.9315 - 1.8763 0.99 2745 141 0.1755 0.2006 REMARK 3 13 1.8763 - 1.8269 0.98 2762 141 0.1812 0.2307 REMARK 3 14 1.8269 - 1.7823 0.98 2758 143 0.1962 0.2074 REMARK 3 15 1.7823 - 1.7418 0.98 2749 124 0.2117 0.2293 REMARK 3 16 1.7418 - 1.7047 0.98 2772 144 0.2181 0.2848 REMARK 3 17 1.7047 - 1.6706 0.99 2711 140 0.2306 0.2572 REMARK 3 18 1.6706 - 1.6391 0.98 2794 138 0.2610 0.3081 REMARK 3 19 1.6391 - 1.6098 0.98 2770 129 0.2671 0.3204 REMARK 3 20 1.6098 - 1.5825 0.99 2740 141 0.2491 0.2771 REMARK 3 21 1.5825 - 1.5570 0.99 2797 143 0.2510 0.2856 REMARK 3 22 1.5570 - 1.5330 0.99 2718 133 0.2526 0.2891 REMARK 3 23 1.5330 - 1.5105 0.99 2812 148 0.2568 0.2848 REMARK 3 24 1.5105 - 1.4892 0.99 2727 137 0.2693 0.2911 REMARK 3 25 1.4892 - 1.4691 0.99 2789 143 0.2896 0.3189 REMARK 3 26 1.4691 - 1.4500 0.99 2722 149 0.3120 0.3663 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3860 REMARK 3 ANGLE : 1.033 5270 REMARK 3 CHIRALITY : 0.089 571 REMARK 3 PLANARITY : 0.007 700 REMARK 3 DIHEDRAL : 24.765 1405 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 220 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0061 45.6006 32.2446 REMARK 3 T TENSOR REMARK 3 T11: 0.3554 T22: 0.3311 REMARK 3 T33: 0.3150 T12: -0.0233 REMARK 3 T13: -0.0364 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.3927 L22: 8.3923 REMARK 3 L33: 8.5337 L12: -3.0963 REMARK 3 L13: -3.0261 L23: -0.2158 REMARK 3 S TENSOR REMARK 3 S11: -0.3213 S12: -0.6190 S13: -0.2561 REMARK 3 S21: 1.3645 S22: -0.0003 S23: -0.1830 REMARK 3 S31: -0.0404 S32: -0.0432 S33: 0.2046 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7062 13.0147 13.6833 REMARK 3 T TENSOR REMARK 3 T11: 0.0980 T22: 0.1516 REMARK 3 T33: 0.1591 T12: 0.0031 REMARK 3 T13: -0.0144 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.4625 L22: 2.8915 REMARK 3 L33: 3.9880 L12: 0.0111 REMARK 3 L13: -0.3212 L23: 2.8224 REMARK 3 S TENSOR REMARK 3 S11: -0.0874 S12: 0.0655 S13: 0.0432 REMARK 3 S21: -0.1334 S22: 0.0453 S23: 0.0678 REMARK 3 S31: -0.0093 S32: -0.0944 S33: 0.0613 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5735 25.2918 15.1356 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.1778 REMARK 3 T33: 0.3053 T12: -0.0363 REMARK 3 T13: -0.0616 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 4.4182 L22: 6.8304 REMARK 3 L33: 3.9233 L12: 1.1887 REMARK 3 L13: 1.7260 L23: 5.0635 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: 0.2008 S13: 0.4774 REMARK 3 S21: -0.2191 S22: 0.0795 S23: 0.1138 REMARK 3 S31: -0.5104 S32: -0.0593 S33: -0.1250 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7576 10.4333 13.6581 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: 0.1769 REMARK 3 T33: 0.1603 T12: 0.0163 REMARK 3 T13: 0.0211 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 3.0225 L22: 1.7851 REMARK 3 L33: 3.2046 L12: 1.5087 REMARK 3 L13: 1.9917 L23: 1.2853 REMARK 3 S TENSOR REMARK 3 S11: -0.1167 S12: 0.1375 S13: 0.0307 REMARK 3 S21: -0.1478 S22: 0.1067 S23: -0.0820 REMARK 3 S31: -0.1259 S32: 0.1817 S33: -0.0096 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8095 -1.1539 10.1451 REMARK 3 T TENSOR REMARK 3 T11: 0.1971 T22: 0.2291 REMARK 3 T33: 0.1911 T12: -0.0456 REMARK 3 T13: -0.0065 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 6.3128 L22: 0.4265 REMARK 3 L33: 2.4129 L12: -0.8977 REMARK 3 L13: 3.6820 L23: -0.6700 REMARK 3 S TENSOR REMARK 3 S11: 0.0402 S12: 0.4815 S13: -0.2664 REMARK 3 S21: -0.0831 S22: 0.0504 S23: 0.0821 REMARK 3 S31: 0.1379 S32: -0.1644 S33: -0.0623 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9813 2.9176 25.9778 REMARK 3 T TENSOR REMARK 3 T11: 0.1163 T22: 0.1605 REMARK 3 T33: 0.1652 T12: 0.0151 REMARK 3 T13: 0.0173 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 7.0594 L22: 7.0241 REMARK 3 L33: 6.4324 L12: 5.4742 REMARK 3 L13: 4.8671 L23: 5.7419 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.1133 S13: -0.1715 REMARK 3 S21: 0.0663 S22: 0.0230 S23: -0.0613 REMARK 3 S31: 0.1351 S32: 0.1319 S33: -0.0503 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0947 18.4432 36.5662 REMARK 3 T TENSOR REMARK 3 T11: 0.2789 T22: 0.3696 REMARK 3 T33: 0.2384 T12: -0.0409 REMARK 3 T13: -0.0824 T23: -0.0769 REMARK 3 L TENSOR REMARK 3 L11: 5.0284 L22: 5.9929 REMARK 3 L33: 8.4892 L12: -1.6591 REMARK 3 L13: -0.4867 L23: -1.4499 REMARK 3 S TENSOR REMARK 3 S11: -0.0827 S12: -0.8737 S13: 0.5651 REMARK 3 S21: 1.1915 S22: -0.0267 S23: -0.4955 REMARK 3 S31: -0.5856 S32: 0.5390 S33: 0.0802 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0546 11.2012 23.3204 REMARK 3 T TENSOR REMARK 3 T11: 0.1397 T22: 0.1720 REMARK 3 T33: 0.1693 T12: 0.0167 REMARK 3 T13: -0.0109 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.2046 L22: 1.9182 REMARK 3 L33: 0.6799 L12: 0.4865 REMARK 3 L13: -0.1674 L23: 0.2203 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: 0.0322 S13: 0.0114 REMARK 3 S21: 0.0307 S22: 0.0044 S23: 0.0623 REMARK 3 S31: 0.0241 S32: 0.0340 S33: -0.0058 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3624 14.7403 29.9002 REMARK 3 T TENSOR REMARK 3 T11: 0.1012 T22: 0.1927 REMARK 3 T33: 0.1429 T12: 0.0192 REMARK 3 T13: 0.0082 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 3.4768 L22: 5.4455 REMARK 3 L33: 4.0132 L12: -1.9205 REMARK 3 L13: 1.2653 L23: -1.2994 REMARK 3 S TENSOR REMARK 3 S11: -0.1768 S12: -0.3040 S13: 0.0927 REMARK 3 S21: 0.4711 S22: 0.1796 S23: 0.0501 REMARK 3 S31: -0.1892 S32: -0.0676 S33: 0.0309 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3429 28.0148 -1.4882 REMARK 3 T TENSOR REMARK 3 T11: 0.8659 T22: 0.8194 REMARK 3 T33: 0.7663 T12: -0.0641 REMARK 3 T13: -0.1108 T23: 0.2344 REMARK 3 L TENSOR REMARK 3 L11: 9.7018 L22: 9.4030 REMARK 3 L33: 8.8407 L12: 1.5908 REMARK 3 L13: 4.8196 L23: 7.2336 REMARK 3 S TENSOR REMARK 3 S11: 0.2265 S12: 0.9880 S13: 0.3716 REMARK 3 S21: -0.1794 S22: 0.0013 S23: -1.0351 REMARK 3 S31: -0.4698 S32: 0.0352 S33: -0.1601 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.7916 32.6346 23.5822 REMARK 3 T TENSOR REMARK 3 T11: 0.1187 T22: 0.1393 REMARK 3 T33: 0.1835 T12: 0.0193 REMARK 3 T13: -0.0034 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.0973 L22: 2.4653 REMARK 3 L33: 1.4074 L12: 0.6647 REMARK 3 L13: -0.4379 L23: -0.1287 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: -0.0178 S13: 0.0530 REMARK 3 S21: 0.0317 S22: 0.0221 S23: 0.1003 REMARK 3 S31: -0.1343 S32: -0.0412 S33: -0.0587 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.6668 21.1348 44.6238 REMARK 3 T TENSOR REMARK 3 T11: 0.3006 T22: 0.3168 REMARK 3 T33: 0.2485 T12: 0.0444 REMARK 3 T13: 0.0707 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.3270 L22: 1.1541 REMARK 3 L33: 7.6940 L12: 0.5103 REMARK 3 L13: 3.1355 L23: 0.5407 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: -0.0649 S13: 0.0813 REMARK 3 S21: 0.1804 S22: 0.0109 S23: -0.1117 REMARK 3 S31: 0.5053 S32: 0.2644 S33: 0.0416 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.7475 21.1667 14.7715 REMARK 3 T TENSOR REMARK 3 T11: 0.1798 T22: 0.2453 REMARK 3 T33: 0.2502 T12: 0.0180 REMARK 3 T13: -0.0470 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 2.3334 L22: 2.9876 REMARK 3 L33: 4.1624 L12: 0.9329 REMARK 3 L13: -1.6477 L23: -1.5569 REMARK 3 S TENSOR REMARK 3 S11: -0.0888 S12: 0.4264 S13: 0.0144 REMARK 3 S21: -0.4143 S22: 0.0921 S23: 0.2589 REMARK 3 S31: 0.2977 S32: -0.5003 S33: 0.0041 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 154 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1920 17.7708 21.1061 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.1447 REMARK 3 T33: 0.1597 T12: 0.0025 REMARK 3 T13: -0.0075 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.6500 L22: 3.4690 REMARK 3 L33: 2.4499 L12: -0.7771 REMARK 3 L13: -0.3860 L23: -0.4225 REMARK 3 S TENSOR REMARK 3 S11: -0.0529 S12: 0.1218 S13: -0.1190 REMARK 3 S21: -0.1860 S22: 0.0353 S23: 0.2286 REMARK 3 S31: 0.1312 S32: -0.1124 S33: 0.0491 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292102825. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97718 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75999 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 47.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 1.42700 REMARK 200 R SYM FOR SHELL (I) : 1.42700 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S2Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CALCIUM CHLORIDE DIHYDRATE, PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.47650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.41500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.47650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.41500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 49 70.12 51.16 REMARK 500 ALA A 158 -126.32 -152.00 REMARK 500 ASN A 186 103.55 -56.99 REMARK 500 HIS A 233 71.28 -106.49 REMARK 500 ARG B 2 -151.69 -100.70 REMARK 500 TYR B 16 -75.73 -164.94 REMARK 500 PRO B 117 5.45 -63.96 REMARK 500 ALA B 158 -127.39 -155.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 644 DISTANCE = 5.90 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 452 O REMARK 620 2 HOH A 475 O 69.3 REMARK 620 3 HOH A 519 O 74.3 63.8 REMARK 620 4 GLU B 43 OE1 114.7 170.7 124.9 REMARK 620 5 HOH B 579 O 128.3 84.8 132.6 86.3 REMARK 620 6 HOH B 584 O 61.1 84.4 132.3 90.3 72.9 REMARK 620 7 HOH B 628 O 122.1 79.9 48.0 103.6 94.4 160.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 15 OD2 REMARK 620 2 ASP B 101 O 27.4 REMARK 620 3 ASP B 101 OD1 31.2 4.6 REMARK 620 4 GLU B 230 OE1 79.3 98.3 102.9 REMARK 620 5 GLU B 230 OE2 72.2 99.6 103.4 43.8 REMARK 620 6 HOH B 479 O 27.9 1.9 3.4 100.0 100.1 REMARK 620 7 HOH B 563 O 27.9 5.9 4.9 102.5 99.6 4.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 101 OD1 REMARK 620 2 ASP B 101 OD2 53.7 REMARK 620 3 GLU B 230 O 82.8 36.9 REMARK 620 4 GLU B 230 OE2 87.2 38.8 5.7 REMARK 620 5 HOH B 458 O 85.4 39.0 2.5 4.0 REMARK 620 6 HOH B 501 O 84.1 40.2 4.2 8.2 4.2 REMARK 620 7 HOH B 514 O 88.3 41.2 5.5 3.2 3.0 6.2 REMARK 620 8 HOH B 531 O 86.2 41.7 4.9 7.3 3.8 2.1 4.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 303 DBREF 6S2R A 1 223 UNP P9WIC7 GPGP_MYCTU 1 223 DBREF 6S2R B 1 223 UNP P9WIC7 GPGP_MYCTU 1 223 SEQADV 6S2R LYS A 224 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R LEU A 225 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA A 226 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA A 227 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA A 228 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R LEU A 229 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R GLU A 230 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 231 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 232 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 233 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 234 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 235 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS A 236 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R LYS B 224 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R LEU B 225 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA B 226 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA B 227 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R ALA B 228 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R LEU B 229 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R GLU B 230 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 231 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 232 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 233 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 234 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 235 UNP P9WIC7 EXPRESSION TAG SEQADV 6S2R HIS B 236 UNP P9WIC7 EXPRESSION TAG SEQRES 1 A 236 MET ARG ALA ARG ARG LEU VAL MET LEU ARG HIS GLY GLN SEQRES 2 A 236 THR ASP TYR ASN VAL GLY SER ARG MET GLN GLY GLN LEU SEQRES 3 A 236 ASP THR GLU LEU SER GLU LEU GLY ARG THR GLN ALA VAL SEQRES 4 A 236 ALA ALA ALA GLU VAL LEU GLY LYS ARG GLN PRO LEU LEU SEQRES 5 A 236 ILE VAL SER SER ASP LEU ARG ARG ALA TYR ASP THR ALA SEQRES 6 A 236 VAL LYS LEU GLY GLU ARG THR GLY LEU VAL VAL ARG VAL SEQRES 7 A 236 ASP THR ARG LEU ARG GLU THR HIS LEU GLY ASP TRP GLN SEQRES 8 A 236 GLY LEU THR HIS ALA GLN ILE ASP ALA ASP ALA PRO GLY SEQRES 9 A 236 ALA ARG LEU ALA TRP ARG GLU ASP ALA THR TRP ALA PRO SEQRES 10 A 236 HIS GLY GLY GLU SER ARG VAL ASP VAL ALA ALA ARG SER SEQRES 11 A 236 ARG PRO LEU VAL ALA GLU LEU VAL ALA SER GLU PRO GLU SEQRES 12 A 236 TRP GLY GLY ALA ASP GLU PRO ASP ARG PRO VAL VAL LEU SEQRES 13 A 236 VAL ALA HIS GLY GLY LEU ILE ALA ALA LEU SER ALA ALA SEQRES 14 A 236 LEU LEU LYS LEU PRO VAL ALA ASN TRP PRO ALA LEU GLY SEQRES 15 A 236 GLY MET GLY ASN ALA SER TRP THR GLN LEU SER GLY HIS SEQRES 16 A 236 TRP ALA PRO GLY SER ASP PHE GLU SER ILE ARG TRP ARG SEQRES 17 A 236 LEU ASP VAL TRP ASN ALA SER ALA GLN VAL SER SER ASP SEQRES 18 A 236 VAL LEU LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS SEQRES 19 A 236 HIS HIS SEQRES 1 B 236 MET ARG ALA ARG ARG LEU VAL MET LEU ARG HIS GLY GLN SEQRES 2 B 236 THR ASP TYR ASN VAL GLY SER ARG MET GLN GLY GLN LEU SEQRES 3 B 236 ASP THR GLU LEU SER GLU LEU GLY ARG THR GLN ALA VAL SEQRES 4 B 236 ALA ALA ALA GLU VAL LEU GLY LYS ARG GLN PRO LEU LEU SEQRES 5 B 236 ILE VAL SER SER ASP LEU ARG ARG ALA TYR ASP THR ALA SEQRES 6 B 236 VAL LYS LEU GLY GLU ARG THR GLY LEU VAL VAL ARG VAL SEQRES 7 B 236 ASP THR ARG LEU ARG GLU THR HIS LEU GLY ASP TRP GLN SEQRES 8 B 236 GLY LEU THR HIS ALA GLN ILE ASP ALA ASP ALA PRO GLY SEQRES 9 B 236 ALA ARG LEU ALA TRP ARG GLU ASP ALA THR TRP ALA PRO SEQRES 10 B 236 HIS GLY GLY GLU SER ARG VAL ASP VAL ALA ALA ARG SER SEQRES 11 B 236 ARG PRO LEU VAL ALA GLU LEU VAL ALA SER GLU PRO GLU SEQRES 12 B 236 TRP GLY GLY ALA ASP GLU PRO ASP ARG PRO VAL VAL LEU SEQRES 13 B 236 VAL ALA HIS GLY GLY LEU ILE ALA ALA LEU SER ALA ALA SEQRES 14 B 236 LEU LEU LYS LEU PRO VAL ALA ASN TRP PRO ALA LEU GLY SEQRES 15 B 236 GLY MET GLY ASN ALA SER TRP THR GLN LEU SER GLY HIS SEQRES 16 B 236 TRP ALA PRO GLY SER ASP PHE GLU SER ILE ARG TRP ARG SEQRES 17 B 236 LEU ASP VAL TRP ASN ALA SER ALA GLN VAL SER SER ASP SEQRES 18 B 236 VAL LEU LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS SEQRES 19 B 236 HIS HIS HET GOL A 301 6 HET GOL A 302 6 HET CA B 301 1 HET CA B 302 1 HET CA B 303 1 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 CA 3(CA 2+) FORMUL 8 HOH *462(H2 O) HELIX 1 AA1 THR A 14 GLY A 19 1 6 HELIX 2 AA2 SER A 31 LYS A 47 1 17 HELIX 3 AA3 LEU A 58 GLY A 73 1 16 HELIX 4 AA4 THR A 80 ARG A 83 5 4 HELIX 5 AA5 LEU A 87 GLN A 91 5 5 HELIX 6 AA6 THR A 94 ALA A 102 1 9 HELIX 7 AA7 GLY A 104 ASP A 112 1 9 HELIX 8 AA8 SER A 122 GLU A 141 1 20 HELIX 9 AA9 HIS A 159 LEU A 171 1 13 HELIX 10 AB1 PRO A 174 LEU A 181 5 8 HELIX 11 AB2 ASP A 201 ILE A 205 5 5 HELIX 12 AB3 SER A 219 HIS A 233 1 15 HELIX 13 AB4 SER B 31 LYS B 47 1 17 HELIX 14 AB5 LEU B 58 GLY B 73 1 16 HELIX 15 AB6 THR B 80 ARG B 83 5 4 HELIX 16 AB7 LEU B 87 GLN B 91 5 5 HELIX 17 AB8 THR B 94 ALA B 102 1 9 HELIX 18 AB9 GLY B 104 ASP B 112 1 9 HELIX 19 AC1 SER B 122 GLU B 141 1 20 HELIX 20 AC2 HIS B 159 LYS B 172 1 14 HELIX 21 AC3 PRO B 174 LEU B 181 5 8 HELIX 22 AC4 SER B 219 LEU B 229 1 11 SHEET 1 AA1 6 VAL A 76 VAL A 78 0 SHEET 2 AA1 6 LEU A 52 SER A 55 1 N SER A 55 O ARG A 77 SHEET 3 AA1 6 VAL A 154 ALA A 158 1 O VAL A 157 N VAL A 54 SHEET 4 AA1 6 ARG A 2 ARG A 10 1 N VAL A 7 O VAL A 154 SHEET 5 AA1 6 TRP A 189 TRP A 196 -1 O GLY A 194 N ARG A 4 SHEET 6 AA1 6 ARG A 206 ALA A 214 -1 O ARG A 206 N HIS A 195 SHEET 1 AA2 6 VAL B 76 VAL B 78 0 SHEET 2 AA2 6 LEU B 52 SER B 55 1 N SER B 55 O ARG B 77 SHEET 3 AA2 6 VAL B 154 ALA B 158 1 O VAL B 157 N VAL B 54 SHEET 4 AA2 6 ARG B 4 ARG B 10 1 N VAL B 7 O VAL B 154 SHEET 5 AA2 6 TRP B 189 HIS B 195 -1 O LEU B 192 N LEU B 6 SHEET 6 AA2 6 ARG B 206 ALA B 214 -1 O ARG B 206 N HIS B 195 LINK O HOH A 452 CA CA B 303 1565 1555 2.54 LINK O HOH A 475 CA CA B 303 1565 1555 2.28 LINK O HOH A 519 CA CA B 303 1565 1555 2.44 LINK OD2 ASP B 15 CA CA B 302 1555 4456 2.37 LINK OE1 GLU B 43 CA CA B 303 1555 1555 2.55 LINK OD1 ASP B 101 CA CA B 301 1555 4446 2.48 LINK OD2 ASP B 101 CA CA B 301 1555 4446 2.35 LINK O ASP B 101 CA CA B 302 1555 1555 2.37 LINK OD1 ASP B 101 CA CA B 302 1555 1555 2.35 LINK O GLU B 230 CA CA B 301 1555 1555 2.37 LINK OE2 GLU B 230 CA CA B 301 1555 1555 2.42 LINK OE1 GLU B 230 CA CA B 302 1555 4456 3.16 LINK OE2 GLU B 230 CA CA B 302 1555 4456 2.39 LINK CA CA B 301 O HOH B 458 1555 1555 2.53 LINK CA CA B 301 O HOH B 501 1555 1555 2.44 LINK CA CA B 301 O HOH B 514 1555 1555 2.37 LINK CA CA B 301 O HOH B 531 1555 1555 2.43 LINK CA CA B 302 O HOH B 479 1555 4446 2.33 LINK CA CA B 302 O HOH B 563 1555 1555 2.51 LINK CA CA B 303 O HOH B 579 1555 1555 2.36 LINK CA CA B 303 O HOH B 584 1555 1555 2.29 LINK CA CA B 303 O HOH B 628 1555 1555 3.04 SITE 1 AC1 6 GLU A 141 GLU A 143 HOH A 424 HOH A 430 SITE 2 AC1 6 HOH B 408 HOH B 422 SITE 1 AC2 4 ASP A 57 TYR A 62 HOH A 426 ARG B 77 SITE 1 AC3 6 ASP B 101 GLU B 230 HOH B 458 HOH B 501 SITE 2 AC3 6 HOH B 514 HOH B 531 SITE 1 AC4 5 ASP B 15 ASP B 101 GLU B 230 HOH B 479 SITE 2 AC4 5 HOH B 563 SITE 1 AC5 7 HOH A 452 HOH A 475 HOH A 519 GLU B 43 SITE 2 AC5 7 HOH B 579 HOH B 584 HOH B 628 CRYST1 98.953 48.830 93.477 90.00 104.33 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010106 0.000000 0.002581 0.00000 SCALE2 0.000000 0.020479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011041 0.00000