HEADER HYDROLASE 26-JUN-19 6S42 TITLE THE DOUBLE MUTANT(ILE44LEU+GLN102HIS) OF HALOALKANE DEHALOGENASE DBEA TITLE 2 FROM BRADYRHIZOBIUM ELKANII USDA94 WITH AN ELIMINATED HALIDE-BINDING TITLE 3 SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOALKANE DEHALOGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.8.1.5; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: CHAIN A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRADYRHIZOBIUM ELKANII; SOURCE 3 ORGANISM_TAXID: 29448; SOURCE 4 GENE: DBEA, DHAA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-21B KEYWDS HALOALKANE DEHALOGENASE, HALIDE-BINDING SITE, DOUBLE MUTANT, RANDOM KEYWDS 2 MICROSEEDING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.PUDNIKOVA,J.R.MESTERS,I.KUTA SMATANOVA REVDAT 2 24-JAN-24 6S42 1 REMARK REVDAT 1 05-FEB-20 6S42 0 JRNL AUTH T.PRUDNIKOVA,I.KUTA SMATANOVA JRNL TITL CRYSTALLIZATION AND CRYSTALLOGRAPHIC ANALYSIS OF A JRNL TITL 2 BRADYRHIZOBIUM ELKANII USDA94 HALOALKANE DEHALOGENASE JRNL TITL 3 VARIANT WITH AN ELIMINATED HALIDE-BINDING SITE JRNL REF CRYSTALS 2019 JRNL REFN ESSN 2073-4352 JRNL DOI 10.3390/CRYST9070375 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 68322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3417 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.1980 - 4.0305 0.98 2831 150 0.1315 0.1533 REMARK 3 2 4.0305 - 3.1995 0.97 2770 145 0.1308 0.1315 REMARK 3 3 3.1995 - 2.7951 0.97 2734 144 0.1315 0.1443 REMARK 3 4 2.7951 - 2.5396 0.97 2751 145 0.1315 0.1769 REMARK 3 5 2.5396 - 2.3576 0.97 2756 145 0.1315 0.1623 REMARK 3 6 2.3576 - 2.2186 0.98 2742 144 0.1315 0.1319 REMARK 3 7 2.2186 - 2.1075 0.97 2727 144 0.1315 0.1451 REMARK 3 8 2.1075 - 2.0158 0.97 2726 143 0.1315 0.1601 REMARK 3 9 2.0158 - 1.9382 0.97 2718 143 0.1315 0.1667 REMARK 3 10 1.9382 - 1.8713 0.97 2738 144 0.1315 0.1555 REMARK 3 11 1.8713 - 1.8128 0.97 2713 143 0.1315 0.1626 REMARK 3 12 1.8128 - 1.7610 0.97 2690 142 0.1315 0.1528 REMARK 3 13 1.7610 - 1.7146 0.97 2712 143 0.1296 0.1393 REMARK 3 14 1.7146 - 1.6728 0.96 2675 140 0.1310 0.1412 REMARK 3 15 1.6728 - 1.6347 0.96 2682 142 0.1315 0.1564 REMARK 3 16 1.6347 - 1.5999 0.96 2716 142 0.1297 0.1542 REMARK 3 17 1.5999 - 1.5679 0.95 2692 142 0.1315 0.1430 REMARK 3 18 1.5679 - 1.5384 0.96 2670 141 0.1315 0.1549 REMARK 3 19 1.5384 - 1.5109 0.95 2689 141 0.1315 0.1363 REMARK 3 20 1.5109 - 1.4853 0.96 2653 140 0.1315 0.1550 REMARK 3 21 1.4853 - 1.4613 0.95 2672 141 0.1315 0.1666 REMARK 3 22 1.4613 - 1.4388 0.96 2656 139 0.1315 0.1813 REMARK 3 23 1.4388 - 1.4177 0.94 2652 140 0.1315 0.2113 REMARK 3 24 1.4177 - 1.4000 0.90 2540 134 0.1315 0.2070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2414 REMARK 3 ANGLE : 0.873 3293 REMARK 3 CHIRALITY : 0.080 353 REMARK 3 PLANARITY : 0.006 436 REMARK 3 DIHEDRAL : 8.987 1352 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2900 2.0645 23.8297 REMARK 3 T TENSOR REMARK 3 T11: 0.0754 T22: 0.1439 REMARK 3 T33: 0.0400 T12: 0.0222 REMARK 3 T13: 0.0234 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.8904 L22: 1.5137 REMARK 3 L33: 0.7337 L12: 0.2958 REMARK 3 L13: -0.3770 L23: -0.0100 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: -0.3123 S13: 0.0262 REMARK 3 S21: 0.2410 S22: 0.0093 S23: 0.0647 REMARK 3 S31: -0.0204 S32: -0.1973 S33: 0.0238 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7294 8.8778 15.3399 REMARK 3 T TENSOR REMARK 3 T11: 0.0938 T22: 0.0977 REMARK 3 T33: 0.0846 T12: 0.0186 REMARK 3 T13: -0.0052 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.9183 L22: 0.6521 REMARK 3 L33: 0.4173 L12: -0.4787 REMARK 3 L13: 0.0561 L23: -0.4220 REMARK 3 S TENSOR REMARK 3 S11: -0.1151 S12: -0.0589 S13: 0.1193 REMARK 3 S21: 0.0931 S22: 0.1044 S23: -0.0580 REMARK 3 S31: -0.1380 S32: -0.0099 S33: -0.0456 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3737 -8.4148 5.4932 REMARK 3 T TENSOR REMARK 3 T11: 0.0653 T22: 0.0590 REMARK 3 T33: 0.0474 T12: -0.0186 REMARK 3 T13: 0.0185 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.4266 L22: 1.6886 REMARK 3 L33: 0.8910 L12: 0.1708 REMARK 3 L13: 0.7251 L23: 0.5255 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: 0.0284 S13: -0.1256 REMARK 3 S21: -0.2232 S22: 0.0315 S23: -0.0287 REMARK 3 S31: 0.0314 S32: -0.0422 S33: 0.0339 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5202 4.6989 11.6554 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0765 REMARK 3 T33: 0.1090 T12: 0.0029 REMARK 3 T13: 0.0134 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.9640 L22: 1.3649 REMARK 3 L33: 0.6985 L12: 0.2343 REMARK 3 L13: 0.3841 L23: -0.1766 REMARK 3 S TENSOR REMARK 3 S11: -0.0463 S12: 0.0439 S13: 0.0182 REMARK 3 S21: -0.0516 S22: 0.0088 S23: -0.2606 REMARK 3 S31: -0.0465 S32: 0.0761 S33: -0.0312 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1292103026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68322 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 41.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 2.180 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4K2A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MGCL2, TRIS-HCL 7.5, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.47250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.97500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.47250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.97500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 411 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ASP A 6 REMARK 465 ARG A 299 REMARK 465 HIS A 300 REMARK 465 ALA A 301 REMARK 465 ALA A 302 REMARK 465 LEU A 303 REMARK 465 GLU A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 298 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 847 O HOH A 877 1.96 REMARK 500 O HOH A 894 O HOH A 896 1.97 REMARK 500 O HOH A 789 O HOH A 823 1.97 REMARK 500 NE2 GLN A 140 O HOH A 501 2.03 REMARK 500 O HOH A 699 O HOH A 813 2.04 REMARK 500 O HOH A 809 O HOH A 920 2.08 REMARK 500 O HOH A 796 O HOH A 820 2.09 REMARK 500 O HOH A 502 O HOH A 810 2.11 REMARK 500 NH2 ARG A 145 O HOH A 502 2.15 REMARK 500 O HOH A 807 O HOH A 865 2.16 REMARK 500 O HOH A 516 O HOH A 675 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 560 O HOH A 760 2556 1.74 REMARK 500 O HOH A 741 O HOH A 801 4456 2.00 REMARK 500 O HOH A 760 O HOH A 832 2556 2.07 REMARK 500 O HOH A 624 O HOH A 831 2556 2.11 REMARK 500 O HOH A 850 O HOH A 861 4456 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 17 -153.28 -123.48 REMARK 500 PRO A 39 56.39 -107.57 REMARK 500 THR A 40 -154.52 -99.43 REMARK 500 SER A 41 -168.09 -162.93 REMARK 500 ASP A 103 -129.46 63.36 REMARK 500 HIS A 139 -175.14 71.63 REMARK 500 ALA A 244 -71.74 -132.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 962 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 963 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 964 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 965 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 966 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 967 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 968 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 969 DISTANCE = 7.46 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEZ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 412 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4K2A RELATED DB: PDB REMARK 900 WILD TYPE DBREF 6S42 A 1 302 UNP E2RV62 E2RV62_BRAEL 1 302 SEQADV 6S42 LEU A 44 UNP E2RV62 ILE 44 ENGINEERED MUTATION SEQADV 6S42 HIS A 102 UNP E2RV62 GLN 102 ENGINEERED MUTATION SEQADV 6S42 LEU A 303 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 GLU A 304 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 305 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 306 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 307 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 308 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 309 UNP E2RV62 EXPRESSION TAG SEQADV 6S42 HIS A 310 UNP E2RV62 EXPRESSION TAG SEQRES 1 A 310 MET THR ILE SER ALA ASP ILE SER LEU HIS HIS ARG ALA SEQRES 2 A 310 VAL LEU GLY SER THR MET ALA TYR ARG GLU THR GLY ARG SEQRES 3 A 310 SER ASP ALA PRO HIS VAL LEU PHE LEU HIS GLY ASN PRO SEQRES 4 A 310 THR SER SER TYR LEU TRP ARG ASN ILE MET PRO LEU VAL SEQRES 5 A 310 ALA PRO VAL GLY HIS CYS ILE ALA PRO ASP LEU ILE GLY SEQRES 6 A 310 TYR GLY GLN SER GLY LYS PRO ASP ILE SER TYR ARG PHE SEQRES 7 A 310 PHE ASP GLN ALA ASP TYR LEU ASP ALA LEU ILE ASP GLU SEQRES 8 A 310 LEU GLY ILE ALA SER ALA TYR LEU VAL ALA HIS ASP TRP SEQRES 9 A 310 GLY THR ALA LEU ALA PHE HIS LEU ALA ALA ARG ARG PRO SEQRES 10 A 310 GLN LEU VAL ARG GLY LEU ALA PHE MET GLU PHE ILE ARG SEQRES 11 A 310 PRO MET ARG ASP TRP SER ASP PHE HIS GLN HIS ASP ALA SEQRES 12 A 310 ALA ARG GLU THR PHE ARG LYS PHE ARG THR PRO GLY VAL SEQRES 13 A 310 GLY GLU ALA MET ILE LEU ASP ASN ASN ALA PHE VAL GLU SEQRES 14 A 310 ARG VAL LEU PRO GLY SER ILE LEU ARG THR LEU SER GLU SEQRES 15 A 310 GLU GLU MET ALA ALA TYR ARG ALA PRO PHE ALA THR ARG SEQRES 16 A 310 GLU SER ARG MET PRO THR LEU MET LEU PRO ARG GLU LEU SEQRES 17 A 310 PRO ILE ALA GLY GLU PRO ALA ASP VAL THR GLN ALA LEU SEQRES 18 A 310 THR ALA ALA HIS ALA ALA LEU ALA ALA SER THR TYR PRO SEQRES 19 A 310 LYS LEU LEU PHE VAL GLY SER PRO GLY ALA LEU VAL SER SEQRES 20 A 310 PRO ALA PHE ALA ALA GLU PHE ALA LYS THR LEU LYS HIS SEQRES 21 A 310 CYS ALA VAL ILE GLN LEU GLY ALA GLY GLY HIS TYR LEU SEQRES 22 A 310 GLN GLU ASP HIS PRO GLU ALA ILE GLY ARG SER VAL ALA SEQRES 23 A 310 GLY TRP ILE ALA GLY ILE GLU ALA ALA SER ALA GLN ARG SEQRES 24 A 310 HIS ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS HET HEZ A 401 8 HET IOD A 402 1 HET IOD A 403 1 HET IOD A 404 1 HET IOD A 405 1 HET IOD A 406 1 HET IOD A 407 1 HET IOD A 408 1 HET IOD A 409 1 HET CL A 410 1 HET CL A 411 1 HET CL A 412 1 HETNAM HEZ HEXANE-1,6-DIOL HETNAM IOD IODIDE ION HETNAM CL CHLORIDE ION FORMUL 2 HEZ C6 H14 O2 FORMUL 3 IOD 8(I 1-) FORMUL 11 CL 3(CL 1-) FORMUL 14 HOH *469(H2 O) HELIX 1 AA1 SER A 41 ARG A 46 5 6 HELIX 2 AA2 ILE A 48 ALA A 53 1 6 HELIX 3 AA3 ARG A 77 LEU A 92 1 16 HELIX 4 AA4 ASP A 103 ARG A 116 1 14 HELIX 5 AA5 ASP A 134 PHE A 138 5 5 HELIX 6 AA6 HIS A 141 ARG A 152 1 12 HELIX 7 AA7 GLY A 155 LEU A 162 1 8 HELIX 8 AA8 ASN A 165 ARG A 170 1 6 HELIX 9 AA9 ARG A 170 SER A 175 1 6 HELIX 10 AB1 SER A 181 ALA A 190 1 10 HELIX 11 AB2 PRO A 191 ALA A 193 5 3 HELIX 12 AB3 ARG A 195 SER A 197 5 3 HELIX 13 AB4 ARG A 198 LEU A 208 1 11 HELIX 14 AB5 PRO A 214 SER A 231 1 18 HELIX 15 AB6 SER A 247 THR A 257 1 11 HELIX 16 AB7 TYR A 272 HIS A 277 1 6 HELIX 17 AB8 HIS A 277 ALA A 297 1 21 SHEET 1 AA1 8 HIS A 10 VAL A 14 0 SHEET 2 AA1 8 SER A 17 THR A 24 -1 O SER A 17 N VAL A 14 SHEET 3 AA1 8 HIS A 57 PRO A 61 -1 O CYS A 58 N THR A 24 SHEET 4 AA1 8 HIS A 31 LEU A 35 1 N VAL A 32 O ILE A 59 SHEET 5 AA1 8 ALA A 97 HIS A 102 1 O VAL A 100 N LEU A 33 SHEET 6 AA1 8 VAL A 120 MET A 126 1 O ALA A 124 N LEU A 99 SHEET 7 AA1 8 LYS A 235 PRO A 242 1 O LEU A 236 N PHE A 125 SHEET 8 AA1 8 CYS A 261 GLY A 269 1 O LEU A 266 N VAL A 239 CISPEP 1 ASN A 38 PRO A 39 0 -12.31 CISPEP 2 GLU A 213 PRO A 214 0 -4.46 CISPEP 3 SER A 241 PRO A 242 0 4.45 SITE 1 AC1 7 ASP A 103 HIS A 139 PHE A 148 VAL A 171 SITE 2 AC1 7 SER A 175 HIS A 271 IOD A 402 SITE 1 AC2 5 ASN A 38 TRP A 104 PHE A 167 PRO A 205 SITE 2 AC2 5 HEZ A 401 SITE 1 AC3 1 ASN A 164 SITE 1 AC4 1 HOH A 853 SITE 1 AC5 1 ARG A 22 SITE 1 AC6 1 LYS A 150 SITE 1 AC7 1 ARG A 149 SITE 1 AC8 2 GLN A 265 GLY A 267 SITE 1 AC9 5 HIS A 31 ALA A 95 SER A 96 HOH A 701 SITE 2 AC9 5 HOH A 899 SITE 1 AD1 3 GLU A 279 ALA A 280 HOH A 797 SITE 1 AD2 2 ARG A 133 HOH A 716 CRYST1 128.945 63.950 46.053 90.00 106.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007755 0.000000 0.002263 0.00000 SCALE2 0.000000 0.015637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022620 0.00000