HEADER STRUCTURAL PROTEIN 10-JUL-19 6S8L TITLE STRUCTURE, THERMODYNAMICS, AND KINETICS OF PLINABULIN BINDING TO TWO TITLE 2 TUBULIN ISOTYPES COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUBULIN ALPHA-1B CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-TUBULIN UBIQUITOUS,TUBULIN K-ALPHA-1,TUBULIN ALPHA- COMPND 5 UBIQUITOUS CHAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TUBULIN BETA-3 CHAIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: TUBULIN BETA-4 CHAIN,TUBULIN BETA-III; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1; COMPND 14 CHAIN: F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TUBA1B; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE CELLS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: TUBB3, TUBB4; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE CELLS; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TUBULIN, MICROTUBULES, MICROTUBULE TARGETING AGENTS, CANCER, KEYWDS 2 STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SHARMA,N.OLIERIC,M.STEINMETZ REVDAT 1 27-NOV-19 6S8L 0 JRNL AUTH G.LA SALA,N.OLIERIC JRNL TITL STRUCTURE, THERMODYNAMICS, AND KINETICS OF PLINABULIN JRNL TITL 2 BINDING TO TWO TUBULIN ISOTYPES JRNL REF CHEM 2019 JRNL REFN ESSN 2451-9294 JRNL DOI 10.1016/J.CHEMPR.2019.08.022 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 93424 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2114 - 5.5924 0.98 3200 172 0.1694 0.2008 REMARK 3 2 5.5924 - 4.4397 0.98 3185 153 0.1450 0.1707 REMARK 3 3 4.4397 - 3.8788 0.99 3177 160 0.1335 0.1759 REMARK 3 4 3.8788 - 3.5243 1.00 3158 169 0.1426 0.2148 REMARK 3 5 3.5243 - 3.2717 1.00 3185 152 0.1577 0.2139 REMARK 3 6 3.2717 - 3.0789 1.00 3163 153 0.1724 0.2332 REMARK 3 7 3.0789 - 2.9247 0.99 3207 139 0.1756 0.2119 REMARK 3 8 2.9247 - 2.7974 0.99 3146 171 0.1837 0.2253 REMARK 3 9 2.7974 - 2.6897 0.99 3130 188 0.1894 0.2544 REMARK 3 10 2.6897 - 2.5969 0.99 3133 159 0.1915 0.2240 REMARK 3 11 2.5969 - 2.5157 0.99 3140 162 0.2406 0.3024 REMARK 3 12 2.5157 - 2.4438 0.98 3092 158 0.2565 0.3306 REMARK 3 13 2.4438 - 2.3795 0.98 3112 172 0.2390 0.3046 REMARK 3 14 2.3795 - 2.3214 0.99 3134 185 0.2429 0.2704 REMARK 3 15 2.3214 - 2.2686 0.98 3118 168 0.2365 0.3021 REMARK 3 16 2.2686 - 2.2203 0.99 3080 172 0.2409 0.3136 REMARK 3 17 2.2203 - 2.1759 0.99 3109 172 0.2410 0.3257 REMARK 3 18 2.1759 - 2.1349 0.99 3173 157 0.2544 0.2801 REMARK 3 19 2.1349 - 2.0967 0.97 3006 187 0.2980 0.3600 REMARK 3 20 2.0967 - 2.0612 0.96 2993 170 0.3426 0.3482 REMARK 3 21 2.0612 - 2.0280 0.96 3023 165 0.3389 0.3465 REMARK 3 22 2.0280 - 1.9968 0.97 3081 166 0.3303 0.3735 REMARK 3 23 1.9968 - 1.9674 0.98 3079 170 0.3325 0.4010 REMARK 3 24 1.9674 - 1.9397 0.98 3074 175 0.3394 0.3775 REMARK 3 25 1.9397 - 1.9135 0.98 3112 147 0.3489 0.4197 REMARK 3 26 1.9135 - 1.8886 0.97 3066 141 0.3490 0.4181 REMARK 3 27 1.8886 - 1.8650 0.87 2783 150 0.3561 0.3798 REMARK 3 28 1.8650 - 1.8425 0.72 2281 99 0.3705 0.3522 REMARK 3 29 1.8425 - 1.8211 0.53 1691 89 0.3522 0.4536 REMARK 3 30 1.8211 - 1.8006 0.29 911 61 0.3476 0.3567 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8079 REMARK 3 ANGLE : 0.721 10986 REMARK 3 CHIRALITY : 0.047 1225 REMARK 3 PLANARITY : 0.005 1421 REMARK 3 DIHEDRAL : 13.883 4781 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5868 2.4551 17.8059 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.2087 REMARK 3 T33: 0.0982 T12: -0.0346 REMARK 3 T13: 0.0246 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.9344 L22: 1.1126 REMARK 3 L33: 1.6153 L12: -0.0963 REMARK 3 L13: 0.3277 L23: -0.2257 REMARK 3 S TENSOR REMARK 3 S11: 0.0790 S12: -0.0243 S13: -0.0024 REMARK 3 S21: -0.0214 S22: -0.0426 S23: -0.1175 REMARK 3 S31: -0.0056 S32: 0.4230 S33: -0.0477 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2283 11.6788 13.8415 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.0872 REMARK 3 T33: 0.1315 T12: -0.0476 REMARK 3 T13: 0.0637 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 2.8042 L22: 0.3272 REMARK 3 L33: 1.3538 L12: -0.9498 REMARK 3 L13: 0.1551 L23: -0.1520 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0554 S13: 0.0238 REMARK 3 S21: -0.0641 S22: 0.0719 S23: 0.0180 REMARK 3 S31: -0.3378 S32: 0.0351 S33: -0.0176 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5749 4.4471 1.8313 REMARK 3 T TENSOR REMARK 3 T11: 0.1605 T22: 0.1378 REMARK 3 T33: 0.0840 T12: -0.0096 REMARK 3 T13: 0.0169 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 2.3239 L22: 2.1923 REMARK 3 L33: 2.4815 L12: 0.4450 REMARK 3 L13: -0.3412 L23: 0.3952 REMARK 3 S TENSOR REMARK 3 S11: 0.1744 S12: 0.1698 S13: -0.0139 REMARK 3 S21: 0.1209 S22: -0.0900 S23: 0.0999 REMARK 3 S31: -0.1483 S32: 0.0532 S33: -0.0520 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 274 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6099 3.4113 -11.7219 REMARK 3 T TENSOR REMARK 3 T11: 0.1456 T22: 0.1935 REMARK 3 T33: 0.1345 T12: -0.0020 REMARK 3 T13: -0.0237 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.8374 L22: 1.8581 REMARK 3 L33: 2.9140 L12: -0.2995 REMARK 3 L13: -1.5284 L23: 0.3442 REMARK 3 S TENSOR REMARK 3 S11: 0.1141 S12: 0.3260 S13: -0.0860 REMARK 3 S21: -0.0890 S22: -0.1493 S23: 0.3134 REMARK 3 S31: -0.1866 S32: -0.1993 S33: 0.0048 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 337 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0863 6.5199 -8.9270 REMARK 3 T TENSOR REMARK 3 T11: 0.2281 T22: 0.2901 REMARK 3 T33: 0.1344 T12: -0.0383 REMARK 3 T13: -0.0667 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.5392 L22: 1.5679 REMARK 3 L33: 1.6194 L12: -0.5575 REMARK 3 L13: -0.6486 L23: 0.9735 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: 0.3554 S13: -0.0550 REMARK 3 S21: -0.0869 S22: -0.0688 S23: 0.2120 REMARK 3 S31: -0.3999 S32: 0.1194 S33: -0.0014 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7861 16.3256 11.9500 REMARK 3 T TENSOR REMARK 3 T11: 0.2730 T22: 0.0941 REMARK 3 T33: 0.1873 T12: -0.0079 REMARK 3 T13: 0.0730 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.8408 L22: 0.3573 REMARK 3 L33: 0.2599 L12: -0.3363 REMARK 3 L13: -0.3200 L23: -0.0153 REMARK 3 S TENSOR REMARK 3 S11: 0.1707 S12: -0.0302 S13: 0.1357 REMARK 3 S21: -0.0903 S22: 0.0062 S23: 0.0763 REMARK 3 S31: -0.4220 S32: -0.0636 S33: -0.1491 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0172 -15.8355 40.3964 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.2051 REMARK 3 T33: 0.3084 T12: 0.0345 REMARK 3 T13: -0.0915 T23: 0.1119 REMARK 3 L TENSOR REMARK 3 L11: 1.2115 L22: 1.8251 REMARK 3 L33: 1.3481 L12: 1.4340 REMARK 3 L13: -0.2850 L23: -0.3363 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: 0.0162 S13: -0.3358 REMARK 3 S21: -0.2232 S22: -0.0061 S23: -0.6103 REMARK 3 S31: 0.3637 S32: 0.0400 S33: -0.1939 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9077 -21.3742 36.7489 REMARK 3 T TENSOR REMARK 3 T11: 0.2144 T22: 0.3186 REMARK 3 T33: 0.5479 T12: 0.0715 REMARK 3 T13: -0.0134 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 5.6767 L22: 3.0923 REMARK 3 L33: 3.6968 L12: -0.8725 REMARK 3 L13: -0.5408 L23: 0.3647 REMARK 3 S TENSOR REMARK 3 S11: 0.0417 S12: 0.3639 S13: -0.4869 REMARK 3 S21: 0.0225 S22: 0.1283 S23: -0.8275 REMARK 3 S31: 0.5432 S32: 0.6309 S33: -0.0109 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9191 -18.9954 51.1705 REMARK 3 T TENSOR REMARK 3 T11: 0.2989 T22: 0.3244 REMARK 3 T33: 0.3248 T12: -0.0054 REMARK 3 T13: -0.0981 T23: 0.1197 REMARK 3 L TENSOR REMARK 3 L11: 1.8497 L22: 4.4779 REMARK 3 L33: 2.4384 L12: -0.6211 REMARK 3 L13: -0.5981 L23: 1.1549 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: -0.7218 S13: -0.5308 REMARK 3 S21: 0.2040 S22: 0.2184 S23: -0.1791 REMARK 3 S31: 0.7811 S32: 0.1760 S33: -0.1073 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 89 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9578 -6.1044 55.4392 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.4033 REMARK 3 T33: 0.3220 T12: 0.0171 REMARK 3 T13: -0.1513 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.2243 L22: 0.2909 REMARK 3 L33: 0.5670 L12: -0.7645 REMARK 3 L13: 0.8209 L23: -0.1643 REMARK 3 S TENSOR REMARK 3 S11: -0.2165 S12: -0.9709 S13: 0.2095 REMARK 3 S21: 0.5403 S22: 0.1649 S23: -0.4061 REMARK 3 S31: -0.0075 S32: 0.2191 S33: -0.0829 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5845 -1.9046 44.0458 REMARK 3 T TENSOR REMARK 3 T11: 0.0986 T22: 0.1769 REMARK 3 T33: 0.2021 T12: -0.0226 REMARK 3 T13: -0.0314 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 3.4124 L22: 0.7310 REMARK 3 L33: 1.1406 L12: -0.4402 REMARK 3 L13: -0.2382 L23: 0.1887 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: -0.1839 S13: 0.2258 REMARK 3 S21: 0.0312 S22: 0.0277 S23: -0.2645 REMARK 3 S31: -0.1594 S32: 0.1728 S33: -0.0288 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3284 -9.7082 31.6176 REMARK 3 T TENSOR REMARK 3 T11: 0.1297 T22: 0.0945 REMARK 3 T33: 0.1570 T12: 0.0243 REMARK 3 T13: -0.0178 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.5880 L22: 1.8546 REMARK 3 L33: 1.3809 L12: 0.3189 REMARK 3 L13: -0.6465 L23: -0.4330 REMARK 3 S TENSOR REMARK 3 S11: 0.0594 S12: -0.0380 S13: -0.2326 REMARK 3 S21: -0.1216 S22: -0.0643 S23: -0.1336 REMARK 3 S31: 0.0999 S32: 0.0142 S33: -0.0285 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 274 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0462 -12.0723 21.8055 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.2593 REMARK 3 T33: 0.1829 T12: -0.0341 REMARK 3 T13: -0.0159 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 3.0976 L22: 2.4314 REMARK 3 L33: 2.6730 L12: 0.1833 REMARK 3 L13: -0.6533 L23: 0.5041 REMARK 3 S TENSOR REMARK 3 S11: -0.0933 S12: 0.3928 S13: -0.5181 REMARK 3 S21: -0.3243 S22: 0.1320 S23: -0.0954 REMARK 3 S31: 0.5613 S32: -0.1408 S33: -0.0229 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 312 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3060 -10.0599 14.3560 REMARK 3 T TENSOR REMARK 3 T11: 0.3146 T22: 0.3316 REMARK 3 T33: 0.2442 T12: 0.0397 REMARK 3 T13: 0.0842 T23: -0.0767 REMARK 3 L TENSOR REMARK 3 L11: 1.5901 L22: 2.7804 REMARK 3 L33: 3.3475 L12: -0.1205 REMARK 3 L13: -0.3625 L23: 1.1033 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: 0.6868 S13: -0.3394 REMARK 3 S21: -0.5855 S22: -0.0329 S23: -0.2361 REMARK 3 S31: 0.2870 S32: 0.0753 S33: 0.0808 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 338 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1304 -3.3393 27.1081 REMARK 3 T TENSOR REMARK 3 T11: 0.1368 T22: 0.1437 REMARK 3 T33: 0.1708 T12: 0.0121 REMARK 3 T13: -0.0162 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.1398 L22: 0.7855 REMARK 3 L33: 1.7009 L12: 0.1965 REMARK 3 L13: -0.4677 L23: 0.1193 REMARK 3 S TENSOR REMARK 3 S11: 0.0444 S12: 0.3848 S13: -0.1476 REMARK 3 S21: -0.1341 S22: -0.0486 S23: -0.1320 REMARK 3 S31: 0.1875 S32: -0.2612 S33: -0.0829 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 402 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9208 8.0953 43.8001 REMARK 3 T TENSOR REMARK 3 T11: 0.1615 T22: 0.1580 REMARK 3 T33: 0.2707 T12: -0.0024 REMARK 3 T13: 0.0126 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.9860 L22: 1.5296 REMARK 3 L33: 4.8628 L12: 0.3583 REMARK 3 L13: -1.3227 L23: -1.3590 REMARK 3 S TENSOR REMARK 3 S11: 0.3097 S12: -0.2656 S13: 0.3897 REMARK 3 S21: 0.2145 S22: -0.0587 S23: -0.1212 REMARK 3 S31: -0.6881 S32: 0.2305 S33: -0.1895 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 13 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7263 2.0839 70.0204 REMARK 3 T TENSOR REMARK 3 T11: 0.2167 T22: 0.6040 REMARK 3 T33: 0.1396 T12: -0.0288 REMARK 3 T13: -0.0173 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.5556 L22: 2.5469 REMARK 3 L33: 5.2041 L12: -0.4177 REMARK 3 L13: -0.1884 L23: 2.8211 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: -0.1652 S13: 0.0466 REMARK 3 S21: -0.1352 S22: 0.1882 S23: -0.2581 REMARK 3 S31: -0.4437 S32: 0.8977 S33: 0.0551 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 25 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0151 -6.1411 73.5224 REMARK 3 T TENSOR REMARK 3 T11: 0.3360 T22: 0.7016 REMARK 3 T33: 0.2453 T12: 0.1128 REMARK 3 T13: 0.0617 T23: 0.1831 REMARK 3 L TENSOR REMARK 3 L11: 5.7531 L22: 3.8056 REMARK 3 L33: 6.0073 L12: -1.7045 REMARK 3 L13: -4.3928 L23: 4.2579 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: -0.5031 S13: -0.3007 REMARK 3 S21: 0.7748 S22: 0.1391 S23: 0.0857 REMARK 3 S31: 0.4431 S32: 0.9402 S33: 0.3513 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 36 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3388 1.9122 63.6108 REMARK 3 T TENSOR REMARK 3 T11: 0.1049 T22: 0.2934 REMARK 3 T33: 0.0858 T12: -0.0124 REMARK 3 T13: -0.0014 T23: 0.0304 REMARK 3 L TENSOR REMARK 3 L11: 0.4121 L22: 3.0578 REMARK 3 L33: 3.4970 L12: 0.0212 REMARK 3 L13: -1.1736 L23: -0.4969 REMARK 3 S TENSOR REMARK 3 S11: 0.0130 S12: -0.4179 S13: -0.0352 REMARK 3 S21: 0.2433 S22: -0.0329 S23: -0.1161 REMARK 3 S31: -0.0320 S32: 0.0989 S33: 0.0233 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 60 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4827 -8.0884 64.2336 REMARK 3 T TENSOR REMARK 3 T11: 0.1817 T22: 0.3185 REMARK 3 T33: 0.1859 T12: 0.0306 REMARK 3 T13: 0.1305 T23: 0.2126 REMARK 3 L TENSOR REMARK 3 L11: 1.0802 L22: 1.6660 REMARK 3 L33: 1.6822 L12: -0.5895 REMARK 3 L13: -0.3503 L23: 0.4698 REMARK 3 S TENSOR REMARK 3 S11: -0.2390 S12: -0.2720 S13: -0.2869 REMARK 3 S21: 0.2276 S22: 0.0119 S23: 0.1311 REMARK 3 S31: 0.2824 S32: 0.0445 S33: -0.1051 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 70 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7524 5.4769 55.6052 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1437 REMARK 3 T33: 0.0885 T12: 0.0141 REMARK 3 T13: 0.0341 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.8438 L22: 2.9887 REMARK 3 L33: 6.6756 L12: -0.2048 REMARK 3 L13: -3.3750 L23: -1.7462 REMARK 3 S TENSOR REMARK 3 S11: 0.0725 S12: -0.0400 S13: 0.3759 REMARK 3 S21: -0.1242 S22: 0.0993 S23: -0.0939 REMARK 3 S31: -0.2543 S32: 0.0324 S33: -0.2066 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 83 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6433 -6.5604 52.1392 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.1080 REMARK 3 T33: 0.0741 T12: 0.0199 REMARK 3 T13: -0.0034 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 6.9611 L22: 2.3328 REMARK 3 L33: 4.1063 L12: 0.4266 REMARK 3 L13: -0.0062 L23: 1.1072 REMARK 3 S TENSOR REMARK 3 S11: -0.2798 S12: -0.1927 S13: -0.5110 REMARK 3 S21: 0.0435 S22: 0.2436 S23: 0.0141 REMARK 3 S31: 0.3018 S32: -0.0077 S33: 0.0146 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 102 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3991 0.8370 45.2276 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.1669 REMARK 3 T33: 0.0538 T12: -0.0166 REMARK 3 T13: -0.0042 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 0.8385 L22: 3.0412 REMARK 3 L33: 1.2735 L12: -0.5037 REMARK 3 L13: -0.2597 L23: 0.5638 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: -0.0622 S13: 0.0386 REMARK 3 S21: -0.1726 S22: 0.1681 S23: 0.0621 REMARK 3 S31: 0.0861 S32: -0.1969 S33: -0.1620 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 126 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5857 -10.6261 42.3163 REMARK 3 T TENSOR REMARK 3 T11: 0.1802 T22: 0.1162 REMARK 3 T33: 0.1786 T12: -0.0221 REMARK 3 T13: 0.0261 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 6.0239 L22: 3.3651 REMARK 3 L33: 7.5859 L12: 1.8773 REMARK 3 L13: -0.1782 L23: 0.5701 REMARK 3 S TENSOR REMARK 3 S11: -0.2363 S12: 0.2681 S13: -0.9574 REMARK 3 S21: 0.1072 S22: -0.0989 S23: 0.1478 REMARK 3 S31: 0.6022 S32: -0.0657 S33: 0.1277 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 135 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6762 1.0010 34.7288 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.2609 REMARK 3 T33: 0.0760 T12: -0.0031 REMARK 3 T13: -0.0099 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.2176 L22: 4.4364 REMARK 3 L33: 0.7649 L12: -0.6237 REMARK 3 L13: -0.4985 L23: -0.8713 REMARK 3 S TENSOR REMARK 3 S11: 0.1414 S12: -0.0006 S13: 0.0222 REMARK 3 S21: -0.4223 S22: -0.0123 S23: -0.2546 REMARK 3 S31: -0.0667 S32: 0.0973 S33: -0.0988 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 159 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5592 -10.4283 32.0509 REMARK 3 T TENSOR REMARK 3 T11: 0.2611 T22: 0.2769 REMARK 3 T33: 0.2156 T12: -0.0514 REMARK 3 T13: -0.0195 T23: -0.0750 REMARK 3 L TENSOR REMARK 3 L11: 3.7897 L22: 4.6044 REMARK 3 L33: 2.3661 L12: -3.9644 REMARK 3 L13: -0.8353 L23: -0.1219 REMARK 3 S TENSOR REMARK 3 S11: -0.0451 S12: 0.6738 S13: -1.0704 REMARK 3 S21: -0.6991 S22: 0.1327 S23: 0.3924 REMARK 3 S31: 0.6183 S32: -0.1870 S33: -0.0346 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6S8L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292101341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98394 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.801 REMARK 200 RESOLUTION RANGE LOW (A) : 45.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.14290 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.89400 REMARK 200 R SYM FOR SHELL (I) : 2.07100 REMARK 200 FOR SHELL : 1.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRISMETHANE, PH 5.5, REMARK 280 SUPPLEMENTED WITH 200 MM AMMONIUM SULFATE AND 25% PEG3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.60000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 38 REMARK 465 ASP A 39 REMARK 465 LYS A 40 REMARK 465 THR A 41 REMARK 465 ILE A 42 REMARK 465 GLY A 43 REMARK 465 GLY A 44 REMARK 465 GLY A 45 REMARK 465 ASP A 46 REMARK 465 GLY A 246 REMARK 465 ARG A 339 REMARK 465 VAL A 437 REMARK 465 ASP A 438 REMARK 465 SER A 439 REMARK 465 VAL A 440 REMARK 465 GLU A 441 REMARK 465 GLY A 442 REMARK 465 GLU A 443 REMARK 465 GLY A 444 REMARK 465 GLU A 445 REMARK 465 GLU A 446 REMARK 465 GLU A 447 REMARK 465 GLY A 448 REMARK 465 GLU A 449 REMARK 465 GLU A 450 REMARK 465 TYR A 451 REMARK 465 MET B 1 REMARK 465 ASP B 179 REMARK 465 GLY B 246 REMARK 465 GLN B 247 REMARK 465 GLY B 279 REMARK 465 SER B 280 REMARK 465 GLN B 281 REMARK 465 GLN B 282 REMARK 465 TYR B 283 REMARK 465 ARG B 284 REMARK 465 GLU B 441 REMARK 465 GLU B 442 REMARK 465 GLU B 443 REMARK 465 GLY B 444 REMARK 465 GLU B 445 REMARK 465 MET B 446 REMARK 465 TYR B 447 REMARK 465 GLU B 448 REMARK 465 ASP B 449 REMARK 465 ASP B 450 REMARK 465 GLU B 451 REMARK 465 GLU B 452 REMARK 465 GLU B 453 REMARK 465 SER B 454 REMARK 465 GLU B 455 REMARK 465 ALA B 456 REMARK 465 GLN B 457 REMARK 465 GLY B 458 REMARK 465 PRO B 459 REMARK 465 LYS B 460 REMARK 465 LEU F 168 REMARK 465 ASN F 169 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 364 O HOH A 601 2.17 REMARK 500 OD1 ASP F 13 O HOH F 201 2.18 REMARK 500 O3' GDP B 502 O HOH B 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 245 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 109 -73.18 -107.62 REMARK 500 PHE A 244 -166.04 -122.29 REMARK 500 CYS A 305 -179.57 -171.85 REMARK 500 THR A 337 66.08 -112.48 REMARK 500 PHE A 404 -0.55 71.00 REMARK 500 THR B 109 -88.58 -114.56 REMARK 500 CYS B 131 81.80 -157.57 REMARK 500 ASN B 249 64.26 -109.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 847 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 848 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH F 382 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH F 383 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH F 384 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH F 385 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH F 386 DISTANCE = 6.99 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP A 501 O1G REMARK 620 2 GTP A 501 O2B 87.1 REMARK 620 3 HOH A 810 O 92.6 91.5 REMARK 620 4 HOH A 696 O 171.9 99.5 91.9 REMARK 620 5 HOH A 669 O 85.5 172.4 90.6 87.8 REMARK 620 6 HOH A 721 O 93.5 89.4 173.9 82.0 89.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP B 502 O2B REMARK 620 2 GDP B 502 O3B 57.9 REMARK 620 3 HOH B 602 O 129.3 71.5 REMARK 620 4 HOH B 650 O 54.9 87.5 123.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PN6 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 503 DBREF 6S8L A 1 451 UNP P68363 TBA1B_HUMAN 1 451 DBREF 6S8L B 1 460 UNP Q13509 TBB3_HUMAN 1 450 DBREF 6S8L F 13 169 PDB 6S8L 6S8L 13 169 SEQRES 1 A 451 MET ARG GLU CYS ILE SER ILE HIS VAL GLY GLN ALA GLY SEQRES 2 A 451 VAL GLN ILE GLY ASN ALA CYS TRP GLU LEU TYR CYS LEU SEQRES 3 A 451 GLU HIS GLY ILE GLN PRO ASP GLY GLN MET PRO SER ASP SEQRES 4 A 451 LYS THR ILE GLY GLY GLY ASP ASP SER PHE ASN THR PHE SEQRES 5 A 451 PHE SER GLU THR GLY ALA GLY LYS HIS VAL PRO ARG ALA SEQRES 6 A 451 VAL PHE VAL ASP LEU GLU PRO THR VAL ILE ASP GLU VAL SEQRES 7 A 451 ARG THR GLY THR TYR ARG GLN LEU PHE HIS PRO GLU GLN SEQRES 8 A 451 LEU ILE THR GLY LYS GLU ASP ALA ALA ASN ASN TYR ALA SEQRES 9 A 451 ARG GLY HIS TYR THR ILE GLY LYS GLU ILE ILE ASP LEU SEQRES 10 A 451 VAL LEU ASP ARG ILE ARG LYS LEU ALA ASP GLN CYS THR SEQRES 11 A 451 GLY LEU GLN GLY PHE LEU VAL PHE HIS SER PHE GLY GLY SEQRES 12 A 451 GLY THR GLY SER GLY PHE THR SER LEU LEU MET GLU ARG SEQRES 13 A 451 LEU SER VAL ASP TYR GLY LYS LYS SER LYS LEU GLU PHE SEQRES 14 A 451 SER ILE TYR PRO ALA PRO GLN VAL SER THR ALA VAL VAL SEQRES 15 A 451 GLU PRO TYR ASN SER ILE LEU THR THR HIS THR THR LEU SEQRES 16 A 451 GLU HIS SER ASP CYS ALA PHE MET VAL ASP ASN GLU ALA SEQRES 17 A 451 ILE TYR ASP ILE CYS ARG ARG ASN LEU ASP ILE GLU ARG SEQRES 18 A 451 PRO THR TYR THR ASN LEU ASN ARG LEU ILE SER GLN ILE SEQRES 19 A 451 VAL SER SER ILE THR ALA SER LEU ARG PHE ASP GLY ALA SEQRES 20 A 451 LEU ASN VAL ASP LEU THR GLU PHE GLN THR ASN LEU VAL SEQRES 21 A 451 PRO TYR PRO ARG ILE HIS PHE PRO LEU ALA THR TYR ALA SEQRES 22 A 451 PRO VAL ILE SER ALA GLU LYS ALA TYR HIS GLU GLN LEU SEQRES 23 A 451 SER VAL ALA GLU ILE THR ASN ALA CYS PHE GLU PRO ALA SEQRES 24 A 451 ASN GLN MET VAL LYS CYS ASP PRO ARG HIS GLY LYS TYR SEQRES 25 A 451 MET ALA CYS CYS LEU LEU TYR ARG GLY ASP VAL VAL PRO SEQRES 26 A 451 LYS ASP VAL ASN ALA ALA ILE ALA THR ILE LYS THR LYS SEQRES 27 A 451 ARG SER ILE GLN PHE VAL ASP TRP CYS PRO THR GLY PHE SEQRES 28 A 451 LYS VAL GLY ILE ASN TYR GLN PRO PRO THR VAL VAL PRO SEQRES 29 A 451 GLY GLY ASP LEU ALA LYS VAL GLN ARG ALA VAL CYS MET SEQRES 30 A 451 LEU SER ASN THR THR ALA ILE ALA GLU ALA TRP ALA ARG SEQRES 31 A 451 LEU ASP HIS LYS PHE ASP LEU MET TYR ALA LYS ARG ALA SEQRES 32 A 451 PHE VAL HIS TRP TYR VAL GLY GLU GLY MET GLU GLU GLY SEQRES 33 A 451 GLU PHE SER GLU ALA ARG GLU ASP MET ALA ALA LEU GLU SEQRES 34 A 451 LYS ASP TYR GLU GLU VAL GLY VAL ASP SER VAL GLU GLY SEQRES 35 A 451 GLU GLY GLU GLU GLU GLY GLU GLU TYR SEQRES 1 B 450 MET ARG GLU ILE VAL HIS ILE GLN ALA GLY GLN CYS GLY SEQRES 2 B 450 ASN GLN ILE GLY ALA LYS PHE TRP GLU VAL ILE SER ASP SEQRES 3 B 450 GLU HIS GLY ILE ASP PRO SER GLY ASN TYR VAL GLY ASP SEQRES 4 B 450 SER ASP LEU GLN LEU GLU ARG ILE SER VAL TYR TYR ASN SEQRES 5 B 450 GLU ALA SER SER HIS LYS TYR VAL PRO ARG ALA ILE LEU SEQRES 6 B 450 VAL ASP LEU GLU PRO GLY THR MET ASP SER VAL ARG SER SEQRES 7 B 450 GLY ALA PHE GLY HIS LEU PHE ARG PRO ASP ASN PHE ILE SEQRES 8 B 450 PHE GLY GLN SER GLY ALA GLY ASN ASN TRP ALA LYS GLY SEQRES 9 B 450 HIS TYR THR GLU GLY ALA GLU LEU VAL ASP SER VAL LEU SEQRES 10 B 450 ASP VAL VAL ARG LYS GLU CYS GLU ASN CYS ASP CYS LEU SEQRES 11 B 450 GLN GLY PHE GLN LEU THR HIS SER LEU GLY GLY GLY THR SEQRES 12 B 450 GLY SER GLY MET GLY THR LEU LEU ILE SER LYS VAL ARG SEQRES 13 B 450 GLU GLU TYR PRO ASP ARG ILE MET ASN THR PHE SER VAL SEQRES 14 B 450 VAL PRO SER PRO LYS VAL SER ASP THR VAL VAL GLU PRO SEQRES 15 B 450 TYR ASN ALA THR LEU SER ILE HIS GLN LEU VAL GLU ASN SEQRES 16 B 450 THR ASP GLU THR TYR CYS ILE ASP ASN GLU ALA LEU TYR SEQRES 17 B 450 ASP ILE CYS PHE ARG THR LEU LYS LEU ALA THR PRO THR SEQRES 18 B 450 TYR GLY ASP LEU ASN HIS LEU VAL SER ALA THR MET SER SEQRES 19 B 450 GLY VAL THR THR SER LEU ARG PHE PRO GLY GLN LEU ASN SEQRES 20 B 450 ALA ASP LEU ARG LYS LEU ALA VAL ASN MET VAL PRO PHE SEQRES 21 B 450 PRO ARG LEU HIS PHE PHE MET PRO GLY PHE ALA PRO LEU SEQRES 22 B 450 THR ALA ARG GLY SER GLN GLN TYR ARG ALA LEU THR VAL SEQRES 23 B 450 PRO GLU LEU THR GLN GLN MET PHE ASP ALA LYS ASN MET SEQRES 24 B 450 MET ALA ALA CYS ASP PRO ARG HIS GLY ARG TYR LEU THR SEQRES 25 B 450 VAL ALA THR VAL PHE ARG GLY ARG MET SER MET LYS GLU SEQRES 26 B 450 VAL ASP GLU GLN MET LEU ALA ILE GLN SER LYS ASN SER SEQRES 27 B 450 SER TYR PHE VAL GLU TRP ILE PRO ASN ASN VAL LYS VAL SEQRES 28 B 450 ALA VAL CYS ASP ILE PRO PRO ARG GLY LEU LYS MET SER SEQRES 29 B 450 SER THR PHE ILE GLY ASN SER THR ALA ILE GLN GLU LEU SEQRES 30 B 450 PHE LYS ARG ILE SER GLU GLN PHE THR ALA MET PHE ARG SEQRES 31 B 450 ARG LYS ALA PHE LEU HIS TRP TYR THR GLY GLU GLY MET SEQRES 32 B 450 ASP GLU MET GLU PHE THR GLU ALA GLU SER ASN MET ASN SEQRES 33 B 450 ASP LEU VAL SER GLU TYR GLN GLN TYR GLN ASP ALA THR SEQRES 34 B 450 ALA GLU GLU GLU GLY GLU MET TYR GLU ASP ASP GLU GLU SEQRES 35 B 450 GLU SER GLU ALA GLN GLY PRO LYS SEQRES 1 F 157 ASP LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY SEQRES 2 F 157 GLN ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA SEQRES 3 F 157 ASP VAL ASN ALA THR ASP ALA SER GLY LEU THR PRO LEU SEQRES 4 F 157 HIS LEU ALA ALA THR TYR GLY HIS LEU GLU ILE VAL GLU SEQRES 5 F 157 VAL LEU LEU LYS HIS GLY ALA ASP VAL ASN ALA ILE ASP SEQRES 6 F 157 ILE MET GLY SER THR PRO LEU HIS LEU ALA ALA LEU ILE SEQRES 7 F 157 GLY HIS LEU GLU ILE VAL GLU VAL LEU LEU LYS HIS GLY SEQRES 8 F 157 ALA ASP VAL ASN ALA VAL ASP THR TRP GLY ASP THR PRO SEQRES 9 F 157 LEU HIS LEU ALA ALA ILE MET GLY HIS LEU GLU ILE VAL SEQRES 10 F 157 GLU VAL LEU LEU LYS HIS GLY ALA ASP VAL ASN ALA GLN SEQRES 11 F 157 ASP LYS PHE GLY LYS THR ALA PHE ASP ILE SER ILE ASP SEQRES 12 F 157 ASN GLY ASN GLU ASP LEU ALA GLU ILE LEU GLN LYS LEU SEQRES 13 F 157 ASN HET GTP A 501 32 HET MG A 502 1 HET PN6 B 501 25 HET GDP B 502 28 HET MG B 503 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM PN6 (3Z,6Z)-3-BENZYLIDENE-6-[(5-TERT-BUTYL-1H-IMIDAZOL-4- HETNAM 2 PN6 YL)METHYLIDENE]PIPERAZINE-2,5-DIONE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETSYN PN6 PLINABULIN FORMUL 4 GTP C10 H16 N5 O14 P3 FORMUL 5 MG 2(MG 2+) FORMUL 6 PN6 C19 H20 N4 O2 FORMUL 7 GDP C10 H15 N5 O11 P2 FORMUL 9 HOH *787(H2 O) HELIX 1 AA1 GLY A 10 GLY A 29 1 20 HELIX 2 AA2 ASP A 47 THR A 51 5 5 HELIX 3 AA3 PRO A 72 GLY A 81 1 10 HELIX 4 AA4 HIS A 88 GLU A 90 5 3 HELIX 5 AA5 ASN A 102 TYR A 108 1 7 HELIX 6 AA6 ILE A 110 GLU A 113 5 4 HELIX 7 AA7 ILE A 114 GLN A 128 1 15 HELIX 8 AA8 GLY A 143 TYR A 161 1 19 HELIX 9 AA9 ALA A 174 SER A 178 5 5 HELIX 10 AB1 VAL A 182 LEU A 195 1 14 HELIX 11 AB2 ASN A 206 ASN A 216 1 11 HELIX 12 AB3 THR A 223 PHE A 244 1 22 HELIX 13 AB4 ASP A 251 VAL A 260 1 10 HELIX 14 AB5 SER A 287 ALA A 294 1 8 HELIX 15 AB6 CYS A 295 GLN A 301 5 7 HELIX 16 AB7 ASP A 306 GLY A 310 5 5 HELIX 17 AB8 VAL A 324 THR A 337 1 14 HELIX 18 AB9 ILE A 384 ALA A 400 1 17 HELIX 19 AC1 PHE A 404 GLY A 410 1 7 HELIX 20 AC2 GLU A 415 GLY A 436 1 22 HELIX 21 AC3 GLY B 10 GLY B 29 1 20 HELIX 22 AC4 ASP B 41 ARG B 48 1 6 HELIX 23 AC5 ILE B 49 VAL B 51 5 3 HELIX 24 AC6 PRO B 72 SER B 80 1 9 HELIX 25 AC7 PHE B 83 PHE B 87 5 5 HELIX 26 AC8 ARG B 88 ASP B 90 5 3 HELIX 27 AC9 ASN B 102 THR B 109 1 8 HELIX 28 AD1 THR B 109 ASN B 128 1 20 HELIX 29 AD2 GLY B 144 TYR B 161 1 18 HELIX 30 AD3 SER B 174 SER B 178 5 5 HELIX 31 AD4 VAL B 182 THR B 198 1 17 HELIX 32 AD5 ASN B 206 THR B 216 1 11 HELIX 33 AD6 THR B 223 PHE B 244 1 22 HELIX 34 AD7 ASP B 251 VAL B 260 1 10 HELIX 35 AD8 THR B 287 ASP B 297 1 11 HELIX 36 AD9 ALA B 298 MET B 301 5 4 HELIX 37 AE1 ASP B 306 GLY B 310 5 5 HELIX 38 AE2 SER B 324 LYS B 338 1 15 HELIX 39 AE3 ASN B 339 PHE B 343 5 5 HELIX 40 AE4 ILE B 384 ARG B 401 1 18 HELIX 41 AE5 PHE B 404 GLY B 410 1 7 HELIX 42 AE6 ASP B 414 ALA B 438 1 25 HELIX 43 AE7 LEU F 14 GLY F 25 1 12 HELIX 44 AE8 GLN F 26 ASN F 36 1 11 HELIX 45 AE9 THR F 49 TYR F 57 1 9 HELIX 46 AF1 HIS F 59 HIS F 69 1 11 HELIX 47 AF2 THR F 82 GLY F 91 1 10 HELIX 48 AF3 HIS F 92 HIS F 102 1 11 HELIX 49 AF4 THR F 115 MET F 123 1 9 HELIX 50 AF5 HIS F 125 HIS F 135 1 11 HELIX 51 AF6 THR F 148 ASN F 156 1 9 HELIX 52 AF7 ASN F 158 GLN F 166 1 9 SHEET 1 AA1 6 LEU A 92 THR A 94 0 SHEET 2 AA1 6 ALA A 65 ASP A 69 1 N PHE A 67 O ILE A 93 SHEET 3 AA1 6 CYS A 4 VAL A 9 1 N HIS A 8 O VAL A 68 SHEET 4 AA1 6 GLY A 134 SER A 140 1 O LEU A 136 N ILE A 7 SHEET 5 AA1 6 SER A 165 TYR A 172 1 O LEU A 167 N PHE A 135 SHEET 6 AA1 6 CYS A 200 ASP A 205 1 O PHE A 202 N GLU A 168 SHEET 1 AA2 2 PHE A 53 GLU A 55 0 SHEET 2 AA2 2 HIS A 61 PRO A 63 -1 O VAL A 62 N SER A 54 SHEET 1 AA3 4 LEU A 269 ALA A 273 0 SHEET 2 AA3 4 ARG A 373 THR A 381 -1 O SER A 379 N LEU A 269 SHEET 3 AA3 4 TYR A 312 GLY A 321 -1 N CYS A 316 O LEU A 378 SHEET 4 AA3 4 LYS A 352 ASN A 356 1 O GLY A 354 N TYR A 319 SHEET 1 AA410 PHE B 92 PHE B 94 0 SHEET 2 AA410 ALA B 65 ASP B 69 1 N LEU B 67 O ILE B 93 SHEET 3 AA410 ILE B 4 ALA B 9 1 N GLN B 8 O VAL B 68 SHEET 4 AA410 GLY B 134 SER B 140 1 O GLN B 136 N ILE B 7 SHEET 5 AA410 ILE B 165 VAL B 172 1 O PHE B 169 N LEU B 137 SHEET 6 AA410 GLU B 200 ASP B 205 1 O TYR B 202 N THR B 168 SHEET 7 AA410 PHE B 267 ALA B 273 1 O PHE B 268 N THR B 201 SHEET 8 AA410 SER B 374 SER B 381 -1 O GLY B 379 N MET B 269 SHEET 9 AA410 TYR B 312 ARG B 320 -1 N LEU B 313 O ASN B 380 SHEET 10 AA410 VAL B 351 CYS B 356 1 O CYS B 356 N PHE B 319 SHEET 1 AA5 2 TYR B 53 GLU B 55 0 SHEET 2 AA5 2 TYR B 61 PRO B 63 -1 O VAL B 62 N ASN B 54 LINK O1G GTP A 501 MG MG A 502 1555 1555 2.06 LINK O2B GTP A 501 MG MG A 502 1555 1555 2.20 LINK MG MG A 502 O HOH A 810 1555 1555 2.07 LINK MG MG A 502 O HOH A 696 1555 1555 2.09 LINK MG MG A 502 O HOH A 669 1555 1555 2.10 LINK MG MG A 502 O HOH A 721 1555 1555 2.03 LINK O2B GDP B 502 MG MG B 503 1555 1555 2.86 LINK O3B GDP B 502 MG MG B 503 1555 1555 2.04 LINK MG MG B 503 O HOH B 602 1555 1555 1.70 LINK MG MG B 503 O HOH B 650 1555 1555 2.88 CISPEP 1 ALA A 273 PRO A 274 0 -6.10 CISPEP 2 ALA B 273 PRO B 274 0 0.65 SITE 1 AC1 27 GLY A 10 GLN A 11 ALA A 12 GLN A 15 SITE 2 AC1 27 ASP A 98 ALA A 99 ALA A 100 ASN A 101 SITE 3 AC1 27 SER A 140 GLY A 143 GLY A 144 THR A 145 SITE 4 AC1 27 GLY A 146 ILE A 171 VAL A 177 GLU A 183 SITE 5 AC1 27 ASN A 206 TYR A 224 ASN A 228 ILE A 231 SITE 6 AC1 27 MG A 502 HOH A 669 HOH A 721 HOH A 760 SITE 7 AC1 27 HOH A 776 HOH A 810 LYS B 254 SITE 1 AC2 5 GTP A 501 HOH A 669 HOH A 696 HOH A 721 SITE 2 AC2 5 HOH A 810 SITE 1 AC3 15 TYR B 52 ASN B 167 GLU B 200 TYR B 202 SITE 2 AC3 15 VAL B 238 THR B 239 SER B 241 LEU B 242 SITE 3 AC3 15 LEU B 248 LEU B 252 LEU B 255 ALA B 316 SITE 4 AC3 15 THR B 317 ILE B 378 HOH B 623 SITE 1 AC4 22 GLY B 10 GLN B 11 CYS B 12 GLN B 15 SITE 2 AC4 22 SER B 140 GLY B 143 GLY B 144 THR B 145 SITE 3 AC4 22 GLY B 146 VAL B 177 GLU B 183 ASN B 206 SITE 4 AC4 22 TYR B 224 ASN B 228 MG B 503 HOH B 601 SITE 5 AC4 22 HOH B 602 HOH B 650 HOH B 656 HOH B 661 SITE 6 AC4 22 HOH B 694 HOH B 725 SITE 1 AC5 4 GDP B 502 HOH B 602 HOH B 650 HOH B 693 CRYST1 73.630 91.200 82.640 90.00 97.49 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013581 0.000000 0.001786 0.00000 SCALE2 0.000000 0.010965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012205 0.00000