HEADER TRANSFERASE 21-AUG-19 6SM8 TITLE HUMAN JAK1 KINASE DOMAIN IN COMPLEX WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: JANUS KINASE 1,JAK-1; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: HUMAN JAK1 KINASE DOMAIN; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TYROSINE-PROTEIN KINASE JAK1; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: JANUS KINASE 1,JAK-1; COMPND 13 EC: 2.7.10.2; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK1, JAK1A, JAK1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: JAK1, JAK1A, JAK1B; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS JANUS KINASE 1 KINASE DOMAIN (JAK1), TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.READ,H.STEUBER REVDAT 3 27-MAY-20 6SM8 1 JRNL REVDAT 2 13-MAY-20 6SM8 1 JRNL REVDAT 1 29-APR-20 6SM8 0 JRNL AUTH Q.SU,E.BANKS,G.BEBERNITZ,K.BELL,C.F.BORENSTEIN,H.CHEN, JRNL AUTH 2 C.E.CHUAQUI,N.DENG,A.D.FERGUSON,S.KAWATKAR,N.P.GRIMSTER, JRNL AUTH 3 L.RUSTON,P.D.LYNE,J.A.READ,X.PENG,X.PEI,S.FAWELL,Z.TANG, JRNL AUTH 4 S.THRONER,M.M.VASBINDER,H.WANG,J.WINTER-HOLT,R.WOESSNER, JRNL AUTH 5 A.WU,W.YANG,M.ZINDA,J.G.KETTLE JRNL TITL DISCOVERY OF JRNL TITL 2 (2R)-N-[3-[2-[(3-METHOXY-1-METHYL-PYRAZOL-4-YL) JRNL TITL 3 AMINO]PYRIMIDIN-4-YL]-1H-INDOL-7-YL]-2-(4-METHYLPIPERAZIN-1- JRNL TITL 4 YL)PROPENAMIDE (AZD4205) AS A POTENT AND SELECTIVE JANUS JRNL TITL 5 KINASE 1 INHIBITOR. JRNL REF J.MED.CHEM. V. 63 4517 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32297743 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01392 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 56072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.420 REMARK 3 FREE R VALUE TEST SET COUNT : 2477 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.86 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.72 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1122 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2697 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1067 REMARK 3 BIN R VALUE (WORKING SET) : 0.2662 REMARK 3 BIN FREE R VALUE : 0.3434 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 55 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4717 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 254 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13330 REMARK 3 B22 (A**2) : 3.03870 REMARK 3 B33 (A**2) : -2.90540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.19920 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.280 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.147 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.133 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.150 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.135 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5041 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6818 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1815 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 841 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5041 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 620 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5932 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.22 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.11 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|867 - A|959 } REMARK 3 ORIGIN FOR THE GROUP (A): -3.8870 58.7370 -2.4940 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.2322 REMARK 3 T33: 0.4714 T12: -0.0324 REMARK 3 T13: 0.0066 T23: -0.1409 REMARK 3 L TENSOR REMARK 3 L11: 3.4096 L22: 1.2077 REMARK 3 L33: 4.1845 L12: -1.6011 REMARK 3 L13: 2.7135 L23: -1.6710 REMARK 3 S TENSOR REMARK 3 S11: 0.3009 S12: 0.4065 S13: -0.9029 REMARK 3 S21: -0.2631 S22: 0.1461 S23: 0.4607 REMARK 3 S31: 0.1433 S32: 0.1844 S33: -0.4470 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|961 - A|1154 } REMARK 3 ORIGIN FOR THE GROUP (A): 12.7600 51.5870 16.4720 REMARK 3 T TENSOR REMARK 3 T11: 0.1414 T22: 0.1132 REMARK 3 T33: 0.4383 T12: -0.0210 REMARK 3 T13: 0.0752 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 6.5681 L22: 3.3445 REMARK 3 L33: 1.5109 L12: -0.2104 REMARK 3 L13: 1.3861 L23: -0.7330 REMARK 3 S TENSOR REMARK 3 S11: 0.0549 S12: -0.2164 S13: -1.3777 REMARK 3 S21: 0.4453 S22: 0.1837 S23: 0.2046 REMARK 3 S31: -0.0614 S32: -0.0303 S33: -0.2386 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { B|867 - B|959 } REMARK 3 ORIGIN FOR THE GROUP (A): 25.4690 3.2030 -2.8980 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1688 REMARK 3 T33: 0.0817 T12: -0.0213 REMARK 3 T13: 0.0327 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 4.1951 L22: 1.8181 REMARK 3 L33: 3.4075 L12: -0.0707 REMARK 3 L13: -1.8282 L23: -0.3855 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.1919 S13: 0.0196 REMARK 3 S21: -0.3655 S22: 0.0374 S23: -0.2193 REMARK 3 S31: -0.0001 S32: 0.0175 S33: -0.0313 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|961 - B|1154 } REMARK 3 ORIGIN FOR THE GROUP (A): 9.0310 10.1700 16.1370 REMARK 3 T TENSOR REMARK 3 T11: 0.1257 T22: 0.2900 REMARK 3 T33: 0.2729 T12: -0.1037 REMARK 3 T13: 0.1386 T23: -0.1978 REMARK 3 L TENSOR REMARK 3 L11: 8.3043 L22: 3.8016 REMARK 3 L33: 1.3796 L12: 3.4280 REMARK 3 L13: -2.0120 L23: -0.4986 REMARK 3 S TENSOR REMARK 3 S11: 0.6853 S12: -1.1987 S13: 1.4367 REMARK 3 S21: 0.4995 S22: -0.3661 S23: 0.8119 REMARK 3 S31: -0.2188 S32: 0.3142 S33: -0.3192 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103926. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 87.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27% (M/V) PEG6000, 0.1 M MES/NAOH PH REMARK 280 6.0 AND 5 MM DTT, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 87.03250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 914 REMARK 465 GLY A 915 REMARK 465 GLY A 916 REMARK 465 ASP A 947 REMARK 465 GLY A 948 REMARK 465 ASP B 854 REMARK 465 ILE B 855 REMARK 465 VAL B 856 REMARK 465 SER B 857 REMARK 465 GLU B 858 REMARK 465 LYS B 859 REMARK 465 LYS B 860 REMARK 465 PRO B 861 REMARK 465 ALA B 862 REMARK 465 THR B 863 REMARK 465 GLU B 864 REMARK 465 SER B 914 REMARK 465 GLY B 915 REMARK 465 ASP B 947 REMARK 465 GLY B 948 REMARK 465 THR B 1030 REMARK 465 ASP B 1031 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 859 CG CD CE NZ REMARK 480 LYS A 860 CG CD CE NZ REMARK 480 GLU A 864 CG CD OE1 OE2 REMARK 480 LYS A 872 CE NZ REMARK 480 LYS A 876 CE NZ REMARK 480 GLU A 913 CG CD OE1 OE2 REMARK 480 LYS A 923 CD CE NZ REMARK 480 LYS A 924 CD CE NZ REMARK 480 LYS A 939 CD CE NZ REMARK 480 GLU A 946 CG CD OE1 OE2 REMARK 480 LYS A 965 CD CE NZ REMARK 480 LYS A 970 CD CE NZ REMARK 480 LYS A 1032 CD CE NZ REMARK 480 GLU A 1033 CD OE1 OE2 REMARK 480 LYS A 1038 CD CE NZ REMARK 480 ARG A 1041 CG CD NE CZ NH1 NH2 REMARK 480 GLN A 1055 CD OE1 NE2 REMARK 480 LYS A 1057 CG CD CE NZ REMARK 480 LYS A 1090 CE NZ REMARK 480 GLN A 1098 CG CD OE1 NE2 REMARK 480 LYS A 1109 CD CE NZ REMARK 480 LYS A 1112 CD CE NZ REMARK 480 LYS A 1130 CE NZ REMARK 480 GLN A 1135 CG CD OE1 NE2 REMARK 480 SER A 1137 OG REMARK 480 GLN A 1143 CD OE1 NE2 REMARK 480 GLU A 1147 CG CD OE1 OE2 REMARK 480 LYS A 1154 CD CE NZ REMARK 480 LYS B 872 CE NZ REMARK 480 LYS B 876 CD CE NZ REMARK 480 GLU B 913 CG CD OE1 OE2 REMARK 480 ILE B 919 CD1 REMARK 480 LYS B 1057 CG CD CE NZ REMARK 480 LYS B 1090 CG CD CE NZ REMARK 480 GLN B 1098 CG CD OE1 NE2 REMARK 480 LEU B 1108 CG CD1 CD2 REMARK 480 LYS B 1109 CG CD CE NZ REMARK 480 LYS B 1112 CE NZ REMARK 480 LYS B 1130 CE NZ REMARK 480 LYS B 1154 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 885 -115.67 53.84 REMARK 500 ASP A 895 67.95 -116.88 REMARK 500 HIS A 918 -6.29 76.30 REMARK 500 ASP A1003 32.99 -145.20 REMARK 500 ILE B 878 -63.48 -102.13 REMARK 500 ILE B 878 -65.15 -99.70 REMARK 500 HIS B 885 -117.59 54.92 REMARK 500 ASP B 895 67.25 -117.03 REMARK 500 ARG B1002 -0.07 74.01 REMARK 500 ASP B1003 33.30 -150.99 REMARK 500 ASP B1003 33.30 -141.68 REMARK 500 PRO B1094 -110.67 -64.75 REMARK 500 HIS B1096 -0.05 -140.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LKT A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LKT B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1203 DBREF 6SM8 A 854 1154 UNP P23458 JAK1_HUMAN 854 1154 DBREF 6SM8 B 854 1154 UNP P23458 JAK1_HUMAN 854 1154 SEQADV 6SM8 GLY A 853 UNP P23458 EXPRESSION TAG SEQRES 1 A 302 GLY ASP ILE VAL SER GLU LYS LYS PRO ALA THR GLU VAL SEQRES 2 A 302 ASP PRO THR HIS PHE GLU LYS ARG PHE LEU LYS ARG ILE SEQRES 3 A 302 ARG ASP LEU GLY GLU GLY HIS PHE GLY LYS VAL GLU LEU SEQRES 4 A 302 CYS ARG TYR ASP PRO GLU GLY ASP ASN THR GLY GLU GLN SEQRES 5 A 302 VAL ALA VAL LYS SER LEU LYS PRO GLU SER GLY GLY ASN SEQRES 6 A 302 HIS ILE ALA ASP LEU LYS LYS GLU ILE GLU ILE LEU ARG SEQRES 7 A 302 ASN LEU TYR HIS GLU ASN ILE VAL LYS TYR LYS GLY ILE SEQRES 8 A 302 CYS THR GLU ASP GLY GLY ASN GLY ILE LYS LEU ILE MET SEQRES 9 A 302 GLU PHE LEU PRO SER GLY SER LEU LYS GLU TYR LEU PRO SEQRES 10 A 302 LYS ASN LYS ASN LYS ILE ASN LEU LYS GLN GLN LEU LYS SEQRES 11 A 302 TYR ALA VAL GLN ILE CYS LYS GLY MET ASP TYR LEU GLY SEQRES 12 A 302 SER ARG GLN TYR VAL HIS ARG ASP LEU ALA ALA ARG ASN SEQRES 13 A 302 VAL LEU VAL GLU SER GLU HIS GLN VAL LYS ILE GLY ASP SEQRES 14 A 302 PHE GLY LEU THR LYS ALA ILE GLU THR ASP LYS GLU PTR SEQRES 15 A 302 PTR THR VAL LYS ASP ASP ARG ASP SER PRO VAL PHE TRP SEQRES 16 A 302 TYR ALA PRO GLU CYS LEU MET GLN SER LYS PHE TYR ILE SEQRES 17 A 302 ALA SER ASP VAL TRP SER PHE GLY VAL THR LEU HIS GLU SEQRES 18 A 302 LEU LEU THR TYR CYS ASP SER ASP SER SER PRO MET ALA SEQRES 19 A 302 LEU PHE LEU LYS MET ILE GLY PRO THR HIS GLY GLN MET SEQRES 20 A 302 THR VAL THR ARG LEU VAL ASN THR LEU LYS GLU GLY LYS SEQRES 21 A 302 ARG LEU PRO CYS PRO PRO ASN CYS PRO ASP GLU VAL TYR SEQRES 22 A 302 GLN LEU MET ARG LYS CYS TRP GLU PHE GLN PRO SER ASN SEQRES 23 A 302 ARG THR SER PHE GLN ASN LEU ILE GLU GLY PHE GLU ALA SEQRES 24 A 302 LEU LEU LYS SEQRES 1 B 301 ASP ILE VAL SER GLU LYS LYS PRO ALA THR GLU VAL ASP SEQRES 2 B 301 PRO THR HIS PHE GLU LYS ARG PHE LEU LYS ARG ILE ARG SEQRES 3 B 301 ASP LEU GLY GLU GLY HIS PHE GLY LYS VAL GLU LEU CYS SEQRES 4 B 301 ARG TYR ASP PRO GLU GLY ASP ASN THR GLY GLU GLN VAL SEQRES 5 B 301 ALA VAL LYS SER LEU LYS PRO GLU SER GLY GLY ASN HIS SEQRES 6 B 301 ILE ALA ASP LEU LYS LYS GLU ILE GLU ILE LEU ARG ASN SEQRES 7 B 301 LEU TYR HIS GLU ASN ILE VAL LYS TYR LYS GLY ILE CYS SEQRES 8 B 301 THR GLU ASP GLY GLY ASN GLY ILE LYS LEU ILE MET GLU SEQRES 9 B 301 PHE LEU PRO SER GLY SER LEU LYS GLU TYR LEU PRO LYS SEQRES 10 B 301 ASN LYS ASN LYS ILE ASN LEU LYS GLN GLN LEU LYS TYR SEQRES 11 B 301 ALA VAL GLN ILE CYS LYS GLY MET ASP TYR LEU GLY SER SEQRES 12 B 301 ARG GLN TYR VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL SEQRES 13 B 301 LEU VAL GLU SER GLU HIS GLN VAL LYS ILE GLY ASP PHE SEQRES 14 B 301 GLY LEU THR LYS ALA ILE GLU THR ASP LYS GLU PTR PTR SEQRES 15 B 301 THR VAL LYS ASP ASP ARG ASP SER PRO VAL PHE TRP TYR SEQRES 16 B 301 ALA PRO GLU CYS LEU MET GLN SER LYS PHE TYR ILE ALA SEQRES 17 B 301 SER ASP VAL TRP SER PHE GLY VAL THR LEU HIS GLU LEU SEQRES 18 B 301 LEU THR TYR CYS ASP SER ASP SER SER PRO MET ALA LEU SEQRES 19 B 301 PHE LEU LYS MET ILE GLY PRO THR HIS GLY GLN MET THR SEQRES 20 B 301 VAL THR ARG LEU VAL ASN THR LEU LYS GLU GLY LYS ARG SEQRES 21 B 301 LEU PRO CYS PRO PRO ASN CYS PRO ASP GLU VAL TYR GLN SEQRES 22 B 301 LEU MET ARG LYS CYS TRP GLU PHE GLN PRO SER ASN ARG SEQRES 23 B 301 THR SER PHE GLN ASN LEU ILE GLU GLY PHE GLU ALA LEU SEQRES 24 B 301 LEU LYS MODRES 6SM8 PTR A 1034 TYR MODIFIED RESIDUE MODRES 6SM8 PTR A 1035 TYR MODIFIED RESIDUE MODRES 6SM8 PTR B 1034 TYR MODIFIED RESIDUE MODRES 6SM8 PTR B 1035 TYR MODIFIED RESIDUE HET PTR A1034 16 HET PTR A1035 16 HET PTR B1034 16 HET PTR B1035 16 HET LKT A1201 32 HET LKT B1201 32 HET EDO B1202 4 HET EDO B1203 4 HETNAM PTR O-PHOSPHOTYROSINE HETNAM LKT 2-CHLORANYL-6-[(3~{S})-3-[(1~{S})-2-CYANO-1-[4-(7~{H}- HETNAM 2 LKT PYRROLO[2,3-D]PYRIMIDIN-4-YL)PYRAZOL-1- HETNAM 3 LKT YL]ETHYL]PYRROLIDIN-1-YL]BENZENECARBONITRILE HETNAM EDO 1,2-ETHANEDIOL HETSYN PTR PHOSPHONOTYROSINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PTR 4(C9 H12 N O6 P) FORMUL 3 LKT 2(C23 H19 CL N8) FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *254(H2 O) HELIX 1 AA1 GLU A 871 ARG A 873 5 3 HELIX 2 AA2 HIS A 918 ASN A 931 1 14 HELIX 3 AA3 SER A 963 LYS A 972 1 10 HELIX 4 AA4 ASN A 976 ARG A 997 1 22 HELIX 5 AA5 ALA A 1005 ARG A 1007 5 3 HELIX 6 AA6 PRO A 1044 TYR A 1048 5 5 HELIX 7 AA7 ALA A 1049 SER A 1056 1 8 HELIX 8 AA8 ILE A 1060 THR A 1076 1 17 HELIX 9 AA9 ASP A 1079 SER A 1082 5 4 HELIX 10 AB1 SER A 1083 GLY A 1093 1 11 HELIX 11 AB2 HIS A 1096 GLN A 1098 5 3 HELIX 12 AB3 MET A 1099 GLU A 1110 1 12 HELIX 13 AB4 PRO A 1121 LYS A 1130 1 10 HELIX 14 AB5 CYS A 1131 GLU A 1133 5 3 HELIX 15 AB6 GLN A 1135 ARG A 1139 5 5 HELIX 16 AB7 SER A 1141 LEU A 1153 1 13 HELIX 17 AB8 GLU B 871 ARG B 873 5 3 HELIX 18 AB9 HIS B 918 ASN B 931 1 14 HELIX 19 AC1 SER B 963 LYS B 972 1 10 HELIX 20 AC2 ASN B 976 ARG B 997 1 22 HELIX 21 AC3 ALA B 1005 ARG B 1007 5 3 HELIX 22 AC4 PRO B 1044 TYR B 1048 5 5 HELIX 23 AC5 ALA B 1049 SER B 1056 1 8 HELIX 24 AC6 ILE B 1060 THR B 1076 1 17 HELIX 25 AC7 ASP B 1079 SER B 1082 5 4 HELIX 26 AC8 SER B 1083 GLY B 1093 1 11 HELIX 27 AC9 HIS B 1096 GLN B 1098 5 3 HELIX 28 AD1 MET B 1099 GLU B 1110 1 12 HELIX 29 AD2 PRO B 1121 LYS B 1130 1 10 HELIX 30 AD3 CYS B 1131 GLU B 1133 5 3 HELIX 31 AD4 GLN B 1135 ARG B 1139 5 5 HELIX 32 AD5 SER B 1141 LEU B 1153 1 13 SHEET 1 AA1 5 LEU A 875 GLY A 884 0 SHEET 2 AA1 5 GLY A 887 TYR A 894 -1 O VAL A 889 N GLY A 882 SHEET 3 AA1 5 GLU A 903 LEU A 910 -1 O GLU A 903 N TYR A 894 SHEET 4 AA1 5 ILE A 952 GLU A 957 -1 O LEU A 954 N LYS A 908 SHEET 5 AA1 5 TYR A 940 THR A 945 -1 N LYS A 941 O ILE A 955 SHEET 1 AA2 2 TYR A 999 VAL A1000 0 SHEET 2 AA2 2 LYS A1026 ALA A1027 -1 O LYS A1026 N VAL A1000 SHEET 1 AA3 2 VAL A1009 SER A1013 0 SHEET 2 AA3 2 GLN A1016 ILE A1019 -1 O LYS A1018 N LEU A1010 SHEET 1 AA4 2 PTR A1034 THR A1036 0 SHEET 2 AA4 2 LYS A1057 TYR A1059 -1 O PHE A1058 N PTR A1035 SHEET 1 AA5 5 LEU B 875 GLY B 884 0 SHEET 2 AA5 5 GLY B 887 TYR B 894 -1 O LEU B 891 N ILE B 878 SHEET 3 AA5 5 GLU B 903 LEU B 910 -1 O GLU B 903 N TYR B 894 SHEET 4 AA5 5 ILE B 952 GLU B 957 -1 O LEU B 954 N LYS B 908 SHEET 5 AA5 5 TYR B 940 THR B 945 -1 N LYS B 941 O ILE B 955 SHEET 1 AA6 2 TYR B 999 VAL B1000 0 SHEET 2 AA6 2 LYS B1026 ALA B1027 -1 O LYS B1026 N VAL B1000 SHEET 1 AA7 2 VAL B1009 SER B1013 0 SHEET 2 AA7 2 GLN B1016 ILE B1019 -1 O LYS B1018 N LEU B1010 SHEET 1 AA8 2 PTR B1034 THR B1036 0 SHEET 2 AA8 2 LYS B1057 TYR B1059 -1 O PHE B1058 N PTR B1035 LINK C GLU A1033 N PTR A1034 1555 1555 1.34 LINK C PTR A1034 N PTR A1035 1555 1555 1.35 LINK C PTR A1035 N THR A1036 1555 1555 1.35 LINK C GLU B1033 N PTR B1034 1555 1555 1.34 LINK C PTR B1034 N PTR B1035 1555 1555 1.35 LINK C PTR B1035 N THR B1036 1555 1555 1.34 SITE 1 AC1 20 LEU A 881 GLY A 882 GLU A 883 GLY A 884 SITE 2 AC1 20 HIS A 885 GLY A 887 LYS A 888 ALA A 906 SITE 3 AC1 20 LYS A 908 GLU A 957 PHE A 958 LEU A 959 SITE 4 AC1 20 ASP A1003 ARG A1007 ASN A1008 LEU A1010 SITE 5 AC1 20 GLY A1020 ASP A1021 HOH A1358 HOH A1364 SITE 1 AC2 22 LEU B 881 GLY B 882 GLU B 883 GLY B 884 SITE 2 AC2 22 HIS B 885 PHE B 886 GLY B 887 LYS B 888 SITE 3 AC2 22 VAL B 889 ALA B 906 LYS B 908 MET B 956 SITE 4 AC2 22 GLU B 957 PHE B 958 LEU B 959 ASP B1003 SITE 5 AC2 22 ARG B1007 ASN B1008 LEU B1010 GLY B1020 SITE 6 AC2 22 ASP B1021 HOH B1340 SITE 1 AC3 5 ASP B 866 PRO B 867 HIS B 869 TYR B 894 SITE 2 AC3 5 GLU B 903 SITE 1 AC4 4 HIS B 934 LYS B 989 ASP B 992 TYR B 993 CRYST1 43.194 174.065 44.956 90.00 94.16 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023151 0.000000 0.001684 0.00000 SCALE2 0.000000 0.005745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022303 0.00000