HEADER MEMBRANE PROTEIN 24-AUG-19 6SNI TITLE CRYO-EM STRUCTURE OF NANODISC RECONSTITUTED YEAST ALG6 IN COMPLEX WITH TITLE 2 6AG9 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOLICHYL PYROPHOSPHATE MAN9GLCNAC2 ALPHA-1,3- COMPND 3 GLUCOSYLTRANSFERASE; COMPND 4 CHAIN: X; COMPND 5 SYNONYM: ASPARAGINE-LINKED GLYCOSYLATION PROTEIN 6,DOL-P-GLC:MAN(9) COMPND 6 GLCNAC(2)-PP-DOL ALPHA-1,3-GLUCOSYLTRANSFERASE,DOLICHYL-P- COMPND 7 GLC:MAN9GLCNAC2-PP-DOLICHYL GLUCOSYLTRANSFERASE; COMPND 8 EC: 2.4.1.267; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: 6AG9-FAB HEAVY CHAIN; COMPND 12 CHAIN: H; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: 6AG9-FAB LIGHT CHAIN; COMPND 16 CHAIN: L; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ALG6, YOR002W, UNA544; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: POET1; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS GLYCOSYLTRANSFERASE, GLUCOSYLTRANSFERASE, GT-C, N-GLYCOSYLATION, KEYWDS 2 MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR J.S.BLOCH,G.PESCIULLESI,J.BOILEVIN,K.NOSOL,R.N.IROBALIEVA,T.DARBRE, AUTHOR 2 M.AEBI,A.A.KOSSIAKOFF,J.L.REYMOND,K.P.LOCHER REVDAT 4 16-OCT-24 6SNI 1 REMARK REVDAT 3 01-APR-20 6SNI 1 JRNL REVDAT 2 18-MAR-20 6SNI 1 JRNL REVDAT 1 11-MAR-20 6SNI 0 JRNL AUTH J.S.BLOCH,G.PESCIULLESI,J.BOILEVIN,K.NOSOL,R.N.IROBALIEVA, JRNL AUTH 2 T.DARBRE,M.AEBI,A.A.KOSSIAKOFF,J.L.REYMOND,K.P.LOCHER JRNL TITL STRUCTURE AND MECHANISM OF THE ER-BASED GLUCOSYLTRANSFERASE JRNL TITL 2 ALG6. JRNL REF NATURE V. 579 443 2020 JRNL REFN ESSN 1476-4687 JRNL PMID 32103179 JRNL DOI 10.1038/S41586-020-2044-Z REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.000 REMARK 3 NUMBER OF PARTICLES : 171764 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6SNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103996. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : NANODISC RECONSTITUTED YEAST REMARK 245 ALG6 IN COMPLEX WITH 6AG9 FAB; REMARK 245 ALG6; 6AG9 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 230.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY X -17 REMARK 465 PRO X -16 REMARK 465 GLY X -15 REMARK 465 GLY X -14 REMARK 465 SER X -13 REMARK 465 THR X -12 REMARK 465 GLY X -11 REMARK 465 ARG X -10 REMARK 465 LEU X -9 REMARK 465 ALA X -8 REMARK 465 GLY X -7 REMARK 465 ALA X -6 REMARK 465 GLY X -5 REMARK 465 GLY X -4 REMARK 465 GLU X -3 REMARK 465 PHE X -2 REMARK 465 VAL X -1 REMARK 465 ASP X 0 REMARK 465 MET X 1 REMARK 465 ALA X 2 REMARK 465 ILE X 3 REMARK 465 GLY X 4 REMARK 465 LYS X 5 REMARK 465 ARG X 6 REMARK 465 LEU X 7 REMARK 465 LEU X 8 REMARK 465 VAL X 9 REMARK 465 ASN X 10 REMARK 465 LYS X 11 REMARK 465 PRO X 12 REMARK 465 ALA X 13 REMARK 465 GLU X 14 REMARK 465 GLU X 15 REMARK 465 SER X 16 REMARK 465 PHE X 17 REMARK 465 TYR X 18 REMARK 465 ALA X 19 REMARK 465 SER X 20 REMARK 465 PRO X 21 REMARK 465 MET X 22 REMARK 465 TYR X 23 REMARK 465 ASP X 24 REMARK 465 PHE X 25 REMARK 465 LEU X 26 REMARK 465 TYR X 27 REMARK 465 PRO X 28 REMARK 465 PHE X 29 REMARK 465 ARG X 30 REMARK 465 PRO X 31 REMARK 465 VAL X 32 REMARK 465 GLY X 33 REMARK 465 ASN X 34 REMARK 465 GLN X 35 REMARK 465 TRP X 36 REMARK 465 LEU X 37 REMARK 465 PHE X 444 REMARK 465 ILE X 445 REMARK 465 THR X 446 REMARK 465 PRO X 447 REMARK 465 ARG X 448 REMARK 465 PHE X 449 REMARK 465 LEU X 450 REMARK 465 PRO X 451 REMARK 465 LYS X 452 REMARK 465 SER X 453 REMARK 465 LEU X 454 REMARK 465 THR X 455 REMARK 465 PRO X 456 REMARK 465 GLY X 457 REMARK 465 PRO X 458 REMARK 465 SER X 459 REMARK 465 ILE X 460 REMARK 465 SER X 461 REMARK 465 SER X 462 REMARK 465 ILE X 463 REMARK 465 ASN X 464 REMARK 465 SER X 465 REMARK 465 ASP X 466 REMARK 465 TYR X 467 REMARK 465 ARG X 468 REMARK 465 ARG X 469 REMARK 465 ARG X 470 REMARK 465 SER X 471 REMARK 465 GLU H -2 REMARK 465 ILE H -1 REMARK 465 SER H 0 REMARK 465 GLU H 1 REMARK 465 ASP H 226 REMARK 465 LYS H 227 REMARK 465 THR H 228 REMARK 465 HIS H 229 REMARK 465 THR H 230 REMARK 465 SER L 0 REMARK 465 GLU L 215 REMARK 465 CYS L 216 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE1 TYR H 154 OE2 GLU H 157 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO H 156 N PRO H 156 CA 0.229 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO H 156 CA - N - CD ANGL. DEV. = -13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER X 63 85.91 -156.69 REMARK 500 TYR X 67 -168.80 -78.93 REMARK 500 PRO X 101 -178.45 -66.65 REMARK 500 PHE X 123 58.83 -97.86 REMARK 500 GLU X 126 -8.05 74.20 REMARK 500 LEU X 138 -7.14 79.58 REMARK 500 PHE X 197 71.37 63.12 REMARK 500 GLU X 217 31.76 76.22 REMARK 500 LEU X 253 -51.43 -121.09 REMARK 500 PHE X 254 -70.59 -69.54 REMARK 500 HIS X 353 65.28 -160.03 REMARK 500 LYS X 380 -167.12 -76.88 REMARK 500 THR X 381 -3.04 78.92 REMARK 500 PRO X 474 170.40 -57.12 REMARK 500 ASN X 476 175.66 180.00 REMARK 500 PHE X 499 -60.75 -93.04 REMARK 500 SER X 504 -5.89 69.33 REMARK 500 SER X 536 -166.74 -78.32 REMARK 500 LYS X 542 -2.23 83.09 REMARK 500 SER H 31 16.63 -141.21 REMARK 500 VAL H 48 -50.87 -122.58 REMARK 500 SER H 52A -9.74 74.52 REMARK 500 GLN H 114 0.88 -66.44 REMARK 500 ALA H 123 114.34 -161.73 REMARK 500 THR H 125 109.36 -46.85 REMARK 500 PRO H 158 -159.41 -103.92 REMARK 500 GLN H 180 -179.05 -68.60 REMARK 500 SER H 182 7.72 -69.06 REMARK 500 PRO H 211 30.62 -83.72 REMARK 500 SER H 212 -5.85 -165.19 REMARK 500 PRO L 8 -146.12 -98.75 REMARK 500 SER L 50 11.90 59.76 REMARK 500 ALA L 51 -10.48 75.43 REMARK 500 SER L 52 -16.94 -140.45 REMARK 500 TYR L 55 -180.00 -66.84 REMARK 500 PRO L 59 172.75 -58.35 REMARK 500 THR L 69 32.11 -144.76 REMARK 500 GLU L 81 52.63 -95.31 REMARK 500 ALA L 84 -169.84 -167.99 REMARK 500 ARG L 110 -166.48 -160.10 REMARK 500 GLU L 145 107.00 -52.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH X1706 DISTANCE = 6.41 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PTY X 1601 REMARK 610 PTY X 1602 REMARK 610 PTY X 1603 REMARK 610 PTY X 1604 REMARK 610 PTY X 1605 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY X 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY X 1602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY X 1603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTY X 1605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y01 X 1606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y01 H 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y01 H 2202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10258 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF NANODISC RECONSTITUTED YEAST ALG6 IN COMPLEX REMARK 900 WITH 6AG9 FAB DBREF 6SNI X 1 544 UNP Q12001 ALG6_YEAST 1 544 DBREF 6SNI H -2 230 PDB 6SNI 6SNI -2 230 DBREF 6SNI L 0 216 PDB 6SNI 6SNI 0 216 SEQADV 6SNI GLY X -17 UNP Q12001 EXPRESSION TAG SEQADV 6SNI PRO X -16 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -15 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -14 UNP Q12001 EXPRESSION TAG SEQADV 6SNI SER X -13 UNP Q12001 EXPRESSION TAG SEQADV 6SNI THR X -12 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -11 UNP Q12001 EXPRESSION TAG SEQADV 6SNI ARG X -10 UNP Q12001 EXPRESSION TAG SEQADV 6SNI LEU X -9 UNP Q12001 EXPRESSION TAG SEQADV 6SNI ALA X -8 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -7 UNP Q12001 EXPRESSION TAG SEQADV 6SNI ALA X -6 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -5 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLY X -4 UNP Q12001 EXPRESSION TAG SEQADV 6SNI GLU X -3 UNP Q12001 EXPRESSION TAG SEQADV 6SNI PHE X -2 UNP Q12001 EXPRESSION TAG SEQADV 6SNI VAL X -1 UNP Q12001 EXPRESSION TAG SEQADV 6SNI ASP X 0 UNP Q12001 EXPRESSION TAG SEQRES 1 X 562 GLY PRO GLY GLY SER THR GLY ARG LEU ALA GLY ALA GLY SEQRES 2 X 562 GLY GLU PHE VAL ASP MET ALA ILE GLY LYS ARG LEU LEU SEQRES 3 X 562 VAL ASN LYS PRO ALA GLU GLU SER PHE TYR ALA SER PRO SEQRES 4 X 562 MET TYR ASP PHE LEU TYR PRO PHE ARG PRO VAL GLY ASN SEQRES 5 X 562 GLN TRP LEU PRO GLU TYR ILE ILE PHE VAL CYS ALA VAL SEQRES 6 X 562 ILE LEU ARG CYS THR ILE GLY LEU GLY PRO TYR SER GLY SEQRES 7 X 562 LYS GLY SER PRO PRO LEU TYR GLY ASP PHE GLU ALA GLN SEQRES 8 X 562 ARG HIS TRP MET GLU ILE THR GLN HIS LEU PRO LEU SER SEQRES 9 X 562 LYS TRP TYR TRP TYR ASP LEU GLN TYR TRP GLY LEU ASP SEQRES 10 X 562 TYR PRO PRO LEU THR ALA PHE HIS SER TYR LEU LEU GLY SEQRES 11 X 562 LEU ILE GLY SER PHE PHE ASN PRO SER TRP PHE ALA LEU SEQRES 12 X 562 GLU LYS SER ARG GLY PHE GLU SER PRO ASP ASN GLY LEU SEQRES 13 X 562 LYS THR TYR MET ARG SER THR VAL ILE ILE SER ASP ILE SEQRES 14 X 562 LEU PHE TYR PHE PRO ALA VAL ILE TYR PHE THR LYS TRP SEQRES 15 X 562 LEU GLY ARG TYR ARG ASN GLN SER PRO ILE GLY GLN SER SEQRES 16 X 562 ILE ALA ALA SER ALA ILE LEU PHE GLN PRO SER LEU MET SEQRES 17 X 562 LEU ILE ASP HIS GLY HIS PHE GLN TYR ASN SER VAL MET SEQRES 18 X 562 LEU GLY LEU THR ALA TYR ALA ILE ASN ASN LEU LEU ASP SEQRES 19 X 562 GLU TYR TYR ALA MET ALA ALA VAL CYS PHE VAL LEU SER SEQRES 20 X 562 ILE CYS PHE LYS GLN MET ALA LEU TYR TYR ALA PRO ILE SEQRES 21 X 562 PHE PHE ALA TYR LEU LEU SER ARG SER LEU LEU PHE PRO SEQRES 22 X 562 LYS PHE ASN ILE ALA ARG LEU THR VAL ILE ALA PHE ALA SEQRES 23 X 562 THR LEU ALA THR PHE ALA ILE ILE PHE ALA PRO LEU TYR SEQRES 24 X 562 PHE LEU GLY GLY GLY LEU LYS ASN ILE HIS GLN CYS ILE SEQRES 25 X 562 HIS ARG ILE PHE PRO PHE ALA ARG GLY ILE PHE GLU ASP SEQRES 26 X 562 LYS VAL ALA ASN PHE TRP CYS VAL THR ASN VAL PHE VAL SEQRES 27 X 562 LYS TYR LYS GLU ARG PHE THR ILE GLN GLN LEU GLN LEU SEQRES 28 X 562 TYR SER LEU ILE ALA THR VAL ILE GLY PHE LEU PRO ALA SEQRES 29 X 562 MET ILE MET THR LEU LEU HIS PRO LYS LYS HIS LEU LEU SEQRES 30 X 562 PRO TYR VAL LEU ILE ALA CYS SER MET SER PHE PHE LEU SEQRES 31 X 562 PHE SER PHE GLN VAL HIS GLU LYS THR ILE LEU ILE PRO SEQRES 32 X 562 LEU LEU PRO ILE THR LEU LEU TYR SER SER THR ASP TRP SEQRES 33 X 562 ASN VAL LEU SER LEU VAL SER TRP ILE ASN ASN VAL ALA SEQRES 34 X 562 LEU PHE THR LEU TRP PRO LEU LEU LYS LYS ASP GLY LEU SEQRES 35 X 562 HIS LEU GLN TYR ALA VAL SER PHE LEU LEU SER ASN TRP SEQRES 36 X 562 LEU ILE GLY ASN PHE SER PHE ILE THR PRO ARG PHE LEU SEQRES 37 X 562 PRO LYS SER LEU THR PRO GLY PRO SER ILE SER SER ILE SEQRES 38 X 562 ASN SER ASP TYR ARG ARG ARG SER LEU LEU PRO TYR ASN SEQRES 39 X 562 VAL VAL TRP LYS SER PHE ILE ILE GLY THR TYR ILE ALA SEQRES 40 X 562 MET GLY PHE TYR HIS PHE LEU ASP GLN PHE VAL ALA PRO SEQRES 41 X 562 PRO SER LYS TYR PRO ASP LEU TRP VAL LEU LEU ASN CYS SEQRES 42 X 562 ALA VAL GLY PHE ILE CYS PHE SER ILE PHE TRP LEU TRP SEQRES 43 X 562 SER TYR TYR LYS ILE PHE THR SER GLY SER LYS SER MET SEQRES 44 X 562 LYS ASP LEU SEQRES 1 H 234 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 H 234 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 H 234 ALA SER GLY PHE ASN VAL TYR SER SER SER ILE HIS TRP SEQRES 4 H 234 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 H 234 SER ILE SER SER TYR SER GLY TYR THR SER TYR ALA ASP SEQRES 6 H 234 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 H 234 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 H 234 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLU TYR TRP SEQRES 9 H 234 SER TRP TYR SER TYR SER TYR GLY ILE ASP TYR TRP GLY SEQRES 10 H 234 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 11 H 234 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 12 H 234 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 13 H 234 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 14 H 234 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 15 H 234 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 16 H 234 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 17 H 234 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 18 H 234 LYS LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 L 217 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 L 217 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 L 217 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 L 217 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 L 217 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 217 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 217 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 217 SER TYR TRP VAL GLY TYR PRO ILE THR PHE GLY GLN GLY SEQRES 9 L 217 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 L 217 VAL PHE ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER SEQRES 11 L 217 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 L 217 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 L 217 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN SEQRES 14 L 217 ASP SER LYS ASP SER THR TYR SER LEU SER SER THR LEU SEQRES 15 L 217 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 L 217 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 L 217 THR LYS SER PHE ASN ARG GLY GLU CYS HET PTY X1601 36 HET PTY X1602 17 HET PTY X1603 20 HET PTY X1604 21 HET PTY X1605 34 HET Y01 X1606 35 HET Y01 H2201 35 HET Y01 H2202 35 HETNAM PTY PHOSPHATIDYLETHANOLAMINE HETNAM Y01 CHOLESTEROL HEMISUCCINATE FORMUL 4 PTY 5(C40 H80 N O8 P) FORMUL 9 Y01 3(C31 H50 O4) FORMUL 12 HOH *7(H2 O) HELIX 1 AA1 ILE X 41 ILE X 53 1 13 HELIX 2 AA2 GLY X 54 GLY X 56 5 3 HELIX 3 AA3 GLY X 68 GLN X 81 1 14 HELIX 4 AA4 PRO X 101 ASN X 119 1 19 HELIX 5 AA5 THR X 140 TYR X 154 1 15 HELIX 6 AA6 TYR X 154 ASN X 170 1 17 HELIX 7 AA7 SER X 172 PHE X 185 1 14 HELIX 8 AA8 GLN X 186 HIS X 194 1 9 HELIX 9 AA9 TYR X 199 GLU X 217 1 19 HELIX 10 AB1 TYR X 218 CYS X 231 1 14 HELIX 11 AB2 PHE X 232 LEU X 237 5 6 HELIX 12 AB3 TYR X 239 LEU X 253 1 15 HELIX 13 AB4 ASN X 258 PHE X 282 1 25 HELIX 14 AB5 GLY X 286 PHE X 298 1 13 HELIX 15 AB6 PHE X 312 ASN X 317 1 6 HELIX 16 AB7 LYS X 321 ARG X 325 5 5 HELIX 17 AB8 THR X 327 LEU X 352 1 26 HELIX 18 AB9 LEU X 358 SER X 374 1 17 HELIX 19 AC1 ILE X 382 LEU X 392 1 11 HELIX 20 AC2 TYR X 393 SER X 395 5 3 HELIX 21 AC3 TRP X 398 THR X 414 1 17 HELIX 22 AC4 LEU X 415 LYS X 421 1 7 HELIX 23 AC5 LEU X 424 GLY X 440 1 17 HELIX 24 AC6 ASN X 476 GLY X 491 1 16 HELIX 25 AC7 PHE X 492 ASP X 497 1 6 HELIX 26 AC8 LEU X 509 SER X 536 1 28 HELIX 27 AC9 ASN H 28 SER H 32 5 5 HELIX 28 AD1 ASP H 61 LYS H 64 5 4 HELIX 29 AD2 SER H 101 TYR H 105 5 5 HELIX 30 AD3 PRO H 194 LEU H 198 5 5 HELIX 31 AD4 GLN L 79 PHE L 83 5 5 HELIX 32 AD5 SER L 123 LYS L 128 1 6 HELIX 33 AD6 LYS L 185 HIS L 191 1 7 SHEET 1 AA1 4 VAL H 5 SER H 7 0 SHEET 2 AA1 4 LEU H 18 ALA H 23 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA2 6 ALA H 91 GLU H 98 -1 N TYR H 93 O THR H 116 SHEET 4 AA2 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O SER H 58 N SER H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA3 4 ALA H 91 GLU H 98 -1 N TYR H 93 O THR H 116 SHEET 4 AA3 4 ILE H 109 TRP H 112 -1 O TYR H 111 N ARG H 97 SHEET 1 AA4 4 SER H 129 LEU H 133 0 SHEET 2 AA4 4 ALA H 145 TYR H 154 -1 O LEU H 150 N PHE H 131 SHEET 3 AA4 4 TYR H 185 VAL H 193 -1 O LEU H 187 N VAL H 151 SHEET 4 AA4 4 VAL H 172 THR H 174 -1 N HIS H 173 O VAL H 190 SHEET 1 AA5 3 THR H 160 SER H 162 0 SHEET 2 AA5 3 TYR H 203 HIS H 209 -1 O ASN H 206 N SER H 162 SHEET 3 AA5 3 THR H 214 VAL H 220 -1 O VAL H 216 N VAL H 207 SHEET 1 AA6 4 MET L 4 SER L 7 0 SHEET 2 AA6 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA6 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA6 4 PHE L 62 SER L 65 -1 N SER L 65 O THR L 72 SHEET 1 AA7 2 SER L 10 ALA L 13 0 SHEET 2 AA7 2 LYS L 105 ILE L 108 1 O GLU L 107 N ALA L 13 SHEET 1 AA8 4 SER L 53 LEU L 54 0 SHEET 2 AA8 4 LYS L 45 TYR L 49 -1 N TYR L 49 O SER L 53 SHEET 3 AA8 4 TRP L 35 GLN L 38 -1 N TRP L 35 O LEU L 47 SHEET 4 AA8 4 THR L 85 TYR L 87 -1 O THR L 85 N GLN L 38 SHEET 1 AA9 2 GLN L 89 SER L 91 0 SHEET 2 AA9 2 ILE L 98 PHE L 100 -1 O THR L 99 N GLN L 90 SHEET 1 AB1 4 SER L 116 PHE L 120 0 SHEET 2 AB1 4 THR L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 AB1 4 TYR L 175 SER L 184 -1 O SER L 179 N CYS L 136 SHEET 4 AB1 4 SER L 161 VAL L 165 -1 N SER L 164 O SER L 178 SHEET 1 AB2 3 LYS L 147 VAL L 152 0 SHEET 2 AB2 3 VAL L 193 THR L 199 -1 O ALA L 195 N LYS L 151 SHEET 3 AB2 3 VAL L 207 ASN L 212 -1 O PHE L 211 N TYR L 194 SSBOND 1 CYS X 314 CYS X 515 1555 1555 2.05 SSBOND 2 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 3 CYS H 149 CYS H 205 1555 1555 2.04 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 5 CYS L 136 CYS L 196 1555 1555 2.03 CISPEP 1 PHE H 155 PRO H 156 0 -3.69 CISPEP 2 GLU H 157 PRO H 158 0 15.56 CISPEP 3 SER L 7 PRO L 8 0 -10.95 CISPEP 4 TYR L 142 PRO L 143 0 5.26 SITE 1 AC1 4 VAL X 478 TRP X 479 ILE X 524 LEU X 527 SITE 1 AC2 2 VAL X 477 SER X 481 SITE 1 AC3 1 SER X 481 SITE 1 AC4 6 PHE X 153 TYR X 160 TYR X 209 ASN X 212 SITE 2 AC4 6 ASN X 213 ASP X 216 SITE 1 AC5 4 Y01 H2202 PRO X 241 THR X 339 SER X 374 SITE 1 AC6 4 ASN H 28 TYR H 30 ILE X 230 PHE X 277 SITE 1 AC7 6 TRP H 102 TYR H 103 ALA X 301 GLN X 332 SITE 2 AC7 6 Y01 X1606 HOH X1702 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000