HEADER CYTOKINE 30-AUG-19 6SP3 TITLE MOUSE INTERLEUKIN-12 SUBUNIT BETA - P80 HOMODIMER IN SPACE GROUP P21 TITLE 2 CRYSTAL FORM 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-12 SUBUNIT BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IL-12B,CYTOTOXIC LYMPHOCYTE MATURATION FACTOR 40 KDA COMPND 5 SUBUNIT,CLMF P40,IL-12 SUBUNIT P40; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: RESIDUES [1-22] FORM THE SIGNAL PEPTIDE AND ARE MOST COMPND 8 LIKELY CLEAVED OFF DURING PROTEIN MATURATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: IL12B; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S MGAT1 -/- GLYCODELETE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS HOMODIMER, ANTAGONIST, FIBRONECTIN, SECRETED GLYCOPROTEIN, CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR Y.BLOCH,S.N.SAVVIDES REVDAT 2 24-JAN-24 6SP3 1 REMARK REVDAT 1 09-SEP-20 6SP3 0 JRNL AUTH Y.BLOCH,S.N.SAVVIDES JRNL TITL AROUND SHE GOES: THE STRUCTURE OF MOUSE INTERLEUKIN-12 P80 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 19007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.8800 - 5.7400 1.00 2624 134 0.2262 0.2607 REMARK 3 2 5.7400 - 4.5600 1.00 2586 136 0.1980 0.1886 REMARK 3 3 4.5600 - 3.9800 1.00 2601 137 0.2129 0.2657 REMARK 3 4 3.9800 - 3.6200 1.00 2570 133 0.2457 0.2855 REMARK 3 5 3.6200 - 3.3600 1.00 2588 135 0.2931 0.3397 REMARK 3 6 3.3600 - 3.1600 1.00 2567 137 0.3402 0.3694 REMARK 3 7 3.1600 - 3.0000 0.98 2521 138 0.4587 0.4900 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.546 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.954 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 100.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 120.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4891 REMARK 3 ANGLE : 0.654 6670 REMARK 3 CHIRALITY : 0.044 777 REMARK 3 PLANARITY : 0.003 840 REMARK 3 DIHEDRAL : 2.382 3437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:230 OR RESID 350:355) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9320 32.6844 7.0016 REMARK 3 T TENSOR REMARK 3 T11: 0.9109 T22: 0.8622 REMARK 3 T33: 0.9990 T12: -0.0114 REMARK 3 T13: -0.1202 T23: 0.0738 REMARK 3 L TENSOR REMARK 3 L11: 5.2222 L22: 4.9390 REMARK 3 L33: 4.4894 L12: 4.1369 REMARK 3 L13: -4.3030 L23: -4.2092 REMARK 3 S TENSOR REMARK 3 S11: 0.1012 S12: -0.5837 S13: -0.4041 REMARK 3 S21: 0.3885 S22: -0.4271 S23: -0.7187 REMARK 3 S31: -0.2451 S32: 0.6045 S33: 0.0012 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 231:334 REMARK 3 ORIGIN FOR THE GROUP (A): -33.6847 18.7988 27.5462 REMARK 3 T TENSOR REMARK 3 T11: 1.4686 T22: 1.2136 REMARK 3 T33: 1.5749 T12: 0.3996 REMARK 3 T13: 0.1746 T23: 0.3140 REMARK 3 L TENSOR REMARK 3 L11: 7.4626 L22: 0.9454 REMARK 3 L33: 4.1666 L12: -0.9557 REMARK 3 L13: -0.4810 L23: 1.7329 REMARK 3 S TENSOR REMARK 3 S11: -0.2934 S12: -0.9602 S13: 0.6608 REMARK 3 S21: 0.5273 S22: 0.2625 S23: 0.6598 REMARK 3 S31: -0.8107 S32: -1.0708 S33: -0.0674 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 1:230 OR RESID 350:355) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5096 -26.5819 18.2008 REMARK 3 T TENSOR REMARK 3 T11: 0.9917 T22: 0.8744 REMARK 3 T33: 0.8086 T12: 0.0779 REMARK 3 T13: -0.0588 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 9.0427 L22: 2.4529 REMARK 3 L33: 1.0311 L12: -4.6858 REMARK 3 L13: -2.0612 L23: 1.1687 REMARK 3 S TENSOR REMARK 3 S11: 0.1128 S12: 0.2054 S13: 0.0854 REMARK 3 S21: -0.1246 S22: -0.1624 S23: -0.1694 REMARK 3 S31: 0.0291 S32: 0.0226 S33: 0.1488 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 231:334 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4191 -10.9262 37.9737 REMARK 3 T TENSOR REMARK 3 T11: 1.1482 T22: 0.9539 REMARK 3 T33: 0.9375 T12: 0.0368 REMARK 3 T13: 0.0050 T23: 0.1221 REMARK 3 L TENSOR REMARK 3 L11: 8.6994 L22: 4.6202 REMARK 3 L33: 6.5044 L12: 1.4080 REMARK 3 L13: -2.6582 L23: -1.3619 REMARK 3 S TENSOR REMARK 3 S11: -0.2278 S12: -0.7444 S13: -0.5205 REMARK 3 S21: 0.8398 S22: 0.2446 S23: 0.7018 REMARK 3 S31: 0.8010 S32: -0.7756 S33: -0.2487 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 23 THROUGH 54 OR REMARK 3 (RESID 55 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 (RESID 56 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 57 REMARK 3 THROUGH 65 OR (RESID 66 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 67 THROUGH 89 OR REMARK 3 RESID 91 THROUGH 146 OR (RESID 147 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 148 THROUGH 181 OR REMARK 3 (RESID 182 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 183 REMARK 3 THROUGH 249 OR (RESID 250 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 251 THROUGH 331)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 23 THROUGH 89 OR REMARK 3 RESID 91 THROUGH 245 OR (RESID 246 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 247 THROUGH 288 OR REMARK 3 (RESID 289 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 290 REMARK 3 THROUGH 331)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SP3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292104086. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20170615 REMARK 200 DATA SCALING SOFTWARE : XDS 20170615 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19059 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.990 REMARK 200 RESOLUTION RANGE LOW (A) : 58.714 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.130 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 8.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 58.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.88 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 43.56 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 6SFF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% MPD, 10% PEG6000, 100MM HEPES PH7.5 REMARK 280 (CRYSTAL SCREEN HT CONDITION 78), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 88.07000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 CYS A 2 REMARK 465 PRO A 3 REMARK 465 GLN A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 THR A 7 REMARK 465 ILE A 8 REMARK 465 SER A 9 REMARK 465 TRP A 10 REMARK 465 PHE A 11 REMARK 465 ALA A 12 REMARK 465 ILE A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 SER A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 MET A 21 REMARK 465 ALA A 22 REMARK 465 LYS A 277 REMARK 465 LYS A 278 REMARK 465 GLU A 279 REMARK 465 LYS A 280 REMARK 465 MET A 281 REMARK 465 LYS A 282 REMARK 465 GLU A 283 REMARK 465 THR A 284 REMARK 465 GLU A 285 REMARK 465 GLU A 286 REMARK 465 ARG A 334 REMARK 465 SER A 335 REMARK 465 GLY A 336 REMARK 465 THR A 337 REMARK 465 LYS A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 MET B 1 REMARK 465 CYS B 2 REMARK 465 PRO B 3 REMARK 465 GLN B 4 REMARK 465 LYS B 5 REMARK 465 LEU B 6 REMARK 465 THR B 7 REMARK 465 ILE B 8 REMARK 465 SER B 9 REMARK 465 TRP B 10 REMARK 465 PHE B 11 REMARK 465 ALA B 12 REMARK 465 ILE B 13 REMARK 465 VAL B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 VAL B 17 REMARK 465 SER B 18 REMARK 465 PRO B 19 REMARK 465 LEU B 20 REMARK 465 MET B 21 REMARK 465 ALA B 22 REMARK 465 LYS B 277 REMARK 465 LYS B 278 REMARK 465 GLU B 279 REMARK 465 LYS B 280 REMARK 465 MET B 281 REMARK 465 LYS B 282 REMARK 465 GLU B 283 REMARK 465 THR B 284 REMARK 465 GLU B 285 REMARK 465 GLU B 286 REMARK 465 ARG B 332 REMARK 465 VAL B 333 REMARK 465 ARG B 334 REMARK 465 SER B 335 REMARK 465 GLY B 336 REMARK 465 THR B 337 REMARK 465 HIS B 341 REMARK 465 HIS B 342 REMARK 465 HIS B 343 REMARK 465 HIS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 80 CE NZ REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 LYS A 123 CD CE NZ REMARK 470 ARG A 136 CZ NH1 NH2 REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 150 CD CE NZ REMARK 470 LYS A 154 CE NZ REMARK 470 LYS A 232 CE NZ REMARK 470 LYS A 237 NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 245 CD CE NZ REMARK 470 ASN A 246 CG OD1 ND2 REMARK 470 ARG A 273 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 275 CG CD OE1 NE2 REMARK 470 ARG A 276 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 289 CG OD1 ND2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 GLN A 304 CG CD OE1 NE2 REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 325 CE NZ REMARK 470 ARG A 332 NE CZ NH1 NH2 REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 GLU B 55 CD OE1 OE2 REMARK 470 ASP B 56 CG OD1 OD2 REMARK 470 HIS B 66 ND1 CD2 CE1 NE2 REMARK 470 LYS B 80 CE NZ REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 LYS B 123 CD CE NZ REMARK 470 ARG B 136 CZ NH1 NH2 REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 MET B 147 CG SD CE REMARK 470 LYS B 150 CD CE NZ REMARK 470 LYS B 154 CE NZ REMARK 470 ARG B 182 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 232 CE NZ REMARK 470 LYS B 237 NZ REMARK 470 LYS B 242 CG CD CE NZ REMARK 470 LYS B 245 CD CE NZ REMARK 470 GLU B 250 CG CD OE1 OE2 REMARK 470 ARG B 273 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 275 CG CD OE1 NE2 REMARK 470 ARG B 276 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 GLU B 302 CG CD OE1 OE2 REMARK 470 GLN B 304 CG CD OE1 NE2 REMARK 470 LYS B 306 CG CD CE NZ REMARK 470 LYS B 325 CE NZ REMARK 470 LYS B 338 CG CD CE NZ REMARK 470 HIS B 340 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 37 30.64 -96.38 REMARK 500 ASP A 40 62.35 -108.55 REMARK 500 LYS A 80 -52.24 -122.38 REMARK 500 ASP A 180 -123.28 62.33 REMARK 500 GLN A 215 -120.30 61.60 REMARK 500 LYS A 242 110.53 -161.68 REMARK 500 LEU A 244 -61.84 -128.36 REMARK 500 SER A 247 35.62 70.16 REMARK 500 CYS A 305 -66.98 -141.61 REMARK 500 TRP B 37 33.77 -98.33 REMARK 500 ASP B 40 62.07 -108.47 REMARK 500 LYS B 80 -52.73 -124.16 REMARK 500 ASP B 180 -121.87 63.12 REMARK 500 GLN B 215 -120.69 61.64 REMARK 500 LEU B 244 -62.76 -128.81 REMARK 500 CYS B 305 -66.88 -142.46 REMARK 500 HIS B 339 94.51 69.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SFF RELATED DB: PDB REMARK 900 MOUSE INTERLEUKIN-12 SUBUNIT BETA - P80 HOMODIMER IN SPACE GROUP I41 REMARK 900 RELATED ID: 6SMC RELATED DB: PDB REMARK 900 MOUSE INTERLEUKIN-12 SUBUNIT BETA - P80 HOMODIMER IN SPACE GROUP P1 DBREF 6SP3 A 1 335 UNP P43432 IL12B_MOUSE 1 335 DBREF 6SP3 B 1 335 UNP P43432 IL12B_MOUSE 1 335 SEQADV 6SP3 GLY A 336 UNP P43432 EXPRESSION TAG SEQADV 6SP3 THR A 337 UNP P43432 EXPRESSION TAG SEQADV 6SP3 LYS A 338 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 339 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 340 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 341 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 342 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 343 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS A 344 UNP P43432 EXPRESSION TAG SEQADV 6SP3 GLY B 336 UNP P43432 EXPRESSION TAG SEQADV 6SP3 THR B 337 UNP P43432 EXPRESSION TAG SEQADV 6SP3 LYS B 338 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 339 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 340 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 341 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 342 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 343 UNP P43432 EXPRESSION TAG SEQADV 6SP3 HIS B 344 UNP P43432 EXPRESSION TAG SEQRES 1 A 344 MET CYS PRO GLN LYS LEU THR ILE SER TRP PHE ALA ILE SEQRES 2 A 344 VAL LEU LEU VAL SER PRO LEU MET ALA MET TRP GLU LEU SEQRES 3 A 344 GLU LYS ASP VAL TYR VAL VAL GLU VAL ASP TRP THR PRO SEQRES 4 A 344 ASP ALA PRO GLY GLU THR VAL ASN LEU THR CYS ASP THR SEQRES 5 A 344 PRO GLU GLU ASP ASP ILE THR TRP THR SER ASP GLN ARG SEQRES 6 A 344 HIS GLY VAL ILE GLY SER GLY LYS THR LEU THR ILE THR SEQRES 7 A 344 VAL LYS GLU PHE LEU ASP ALA GLY GLN TYR THR CYS HIS SEQRES 8 A 344 LYS GLY GLY GLU THR LEU SER HIS SER HIS LEU LEU LEU SEQRES 9 A 344 HIS LYS LYS GLU ASN GLY ILE TRP SER THR GLU ILE LEU SEQRES 10 A 344 LYS ASN PHE LYS ASN LYS THR PHE LEU LYS CYS GLU ALA SEQRES 11 A 344 PRO ASN TYR SER GLY ARG PHE THR CYS SER TRP LEU VAL SEQRES 12 A 344 GLN ARG ASN MET ASP LEU LYS PHE ASN ILE LYS SER SER SEQRES 13 A 344 SER SER SER PRO ASP SER ARG ALA VAL THR CYS GLY MET SEQRES 14 A 344 ALA SER LEU SER ALA GLU LYS VAL THR LEU ASP GLN ARG SEQRES 15 A 344 ASP TYR GLU LYS TYR SER VAL SER CYS GLN GLU ASP VAL SEQRES 16 A 344 THR CYS PRO THR ALA GLU GLU THR LEU PRO ILE GLU LEU SEQRES 17 A 344 ALA LEU GLU ALA ARG GLN GLN ASN LYS TYR GLU ASN TYR SEQRES 18 A 344 SER THR SER PHE PHE ILE ARG ASP ILE ILE LYS PRO ASP SEQRES 19 A 344 PRO PRO LYS ASN LEU GLN MET LYS PRO LEU LYS ASN SER SEQRES 20 A 344 GLN VAL GLU VAL SER TRP GLU TYR PRO ASP SER TRP SER SEQRES 21 A 344 THR PRO HIS SER TYR PHE SER LEU LYS PHE PHE VAL ARG SEQRES 22 A 344 ILE GLN ARG LYS LYS GLU LYS MET LYS GLU THR GLU GLU SEQRES 23 A 344 GLY CYS ASN GLN LYS GLY ALA PHE LEU VAL GLU LYS THR SEQRES 24 A 344 SER THR GLU VAL GLN CYS LYS GLY GLY ASN VAL CYS VAL SEQRES 25 A 344 GLN ALA GLN ASP ARG TYR TYR ASN SER SER CYS SER LYS SEQRES 26 A 344 TRP ALA CYS VAL PRO CYS ARG VAL ARG SER GLY THR LYS SEQRES 27 A 344 HIS HIS HIS HIS HIS HIS SEQRES 1 B 344 MET CYS PRO GLN LYS LEU THR ILE SER TRP PHE ALA ILE SEQRES 2 B 344 VAL LEU LEU VAL SER PRO LEU MET ALA MET TRP GLU LEU SEQRES 3 B 344 GLU LYS ASP VAL TYR VAL VAL GLU VAL ASP TRP THR PRO SEQRES 4 B 344 ASP ALA PRO GLY GLU THR VAL ASN LEU THR CYS ASP THR SEQRES 5 B 344 PRO GLU GLU ASP ASP ILE THR TRP THR SER ASP GLN ARG SEQRES 6 B 344 HIS GLY VAL ILE GLY SER GLY LYS THR LEU THR ILE THR SEQRES 7 B 344 VAL LYS GLU PHE LEU ASP ALA GLY GLN TYR THR CYS HIS SEQRES 8 B 344 LYS GLY GLY GLU THR LEU SER HIS SER HIS LEU LEU LEU SEQRES 9 B 344 HIS LYS LYS GLU ASN GLY ILE TRP SER THR GLU ILE LEU SEQRES 10 B 344 LYS ASN PHE LYS ASN LYS THR PHE LEU LYS CYS GLU ALA SEQRES 11 B 344 PRO ASN TYR SER GLY ARG PHE THR CYS SER TRP LEU VAL SEQRES 12 B 344 GLN ARG ASN MET ASP LEU LYS PHE ASN ILE LYS SER SER SEQRES 13 B 344 SER SER SER PRO ASP SER ARG ALA VAL THR CYS GLY MET SEQRES 14 B 344 ALA SER LEU SER ALA GLU LYS VAL THR LEU ASP GLN ARG SEQRES 15 B 344 ASP TYR GLU LYS TYR SER VAL SER CYS GLN GLU ASP VAL SEQRES 16 B 344 THR CYS PRO THR ALA GLU GLU THR LEU PRO ILE GLU LEU SEQRES 17 B 344 ALA LEU GLU ALA ARG GLN GLN ASN LYS TYR GLU ASN TYR SEQRES 18 B 344 SER THR SER PHE PHE ILE ARG ASP ILE ILE LYS PRO ASP SEQRES 19 B 344 PRO PRO LYS ASN LEU GLN MET LYS PRO LEU LYS ASN SER SEQRES 20 B 344 GLN VAL GLU VAL SER TRP GLU TYR PRO ASP SER TRP SER SEQRES 21 B 344 THR PRO HIS SER TYR PHE SER LEU LYS PHE PHE VAL ARG SEQRES 22 B 344 ILE GLN ARG LYS LYS GLU LYS MET LYS GLU THR GLU GLU SEQRES 23 B 344 GLY CYS ASN GLN LYS GLY ALA PHE LEU VAL GLU LYS THR SEQRES 24 B 344 SER THR GLU VAL GLN CYS LYS GLY GLY ASN VAL CYS VAL SEQRES 25 B 344 GLN ALA GLN ASP ARG TYR TYR ASN SER SER CYS SER LYS SEQRES 26 B 344 TRP ALA CYS VAL PRO CYS ARG VAL ARG SER GLY THR LYS SEQRES 27 B 344 HIS HIS HIS HIS HIS HIS HET NAG C 1 27 HET NAG C 2 27 HET BMA C 3 20 HET MAN C 4 21 HET MAN C 5 22 HET MAN C 6 22 HET NAG D 1 27 HET NAG D 2 27 HET BMA D 3 20 HET MAN D 4 21 HET MAN D 5 22 HET MAN D 6 22 HET CL B 407 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 6(C6 H12 O6) FORMUL 5 CL CL 1- HELIX 1 AA1 GLU A 81 ALA A 85 5 5 HELIX 2 AA2 PHE A 226 ILE A 231 1 6 HELIX 3 AA3 GLU B 81 ALA B 85 5 5 HELIX 4 AA4 PHE B 226 ILE B 231 1 6 SHEET 1 AA1 6 TRP A 24 GLU A 27 0 SHEET 2 AA1 6 VAL A 30 ASP A 36 -1 O VAL A 32 N TRP A 24 SHEET 3 AA1 6 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA1 6 GLY A 86 LYS A 92 -1 N CYS A 90 O SER A 98 SHEET 5 AA1 6 ILE A 58 SER A 62 -1 N THR A 59 O HIS A 91 SHEET 6 AA1 6 ARG A 65 SER A 71 -1 O GLY A 70 N TRP A 60 SHEET 1 AA2 4 TRP A 24 GLU A 27 0 SHEET 2 AA2 4 VAL A 30 ASP A 36 -1 O VAL A 32 N TRP A 24 SHEET 3 AA2 4 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA2 4 ILE A 111 TRP A 112 -1 O ILE A 111 N GLU A 108 SHEET 1 AA3 2 GLU A 44 THR A 49 0 SHEET 2 AA3 2 THR A 74 VAL A 79 -1 O LEU A 75 N LEU A 48 SHEET 1 AA4 4 LEU A 117 LYS A 118 0 SHEET 2 AA4 4 ARG A 136 VAL A 143 -1 O LEU A 142 N LYS A 118 SHEET 3 AA4 4 ARG A 182 GLU A 193 -1 O CYS A 191 N PHE A 137 SHEET 4 AA4 4 VAL A 165 CYS A 167 -1 N THR A 166 O GLN A 192 SHEET 1 AA5 4 LYS A 127 GLU A 129 0 SHEET 2 AA5 4 ARG A 136 VAL A 143 -1 O SER A 140 N LYS A 127 SHEET 3 AA5 4 ARG A 182 GLU A 193 -1 O CYS A 191 N PHE A 137 SHEET 4 AA5 4 SER A 171 LEU A 179 -1 N VAL A 177 O TYR A 184 SHEET 1 AA6 3 LEU A 149 SER A 155 0 SHEET 2 AA6 3 ILE A 206 GLN A 214 -1 O GLU A 211 N ASN A 152 SHEET 3 AA6 3 LYS A 217 PHE A 225 -1 O TYR A 221 N LEU A 210 SHEET 1 AA7 3 LYS A 237 LYS A 245 0 SHEET 2 AA7 3 GLN A 248 GLU A 254 -1 O GLU A 250 N LYS A 242 SHEET 3 AA7 3 SER A 300 VAL A 303 -1 O THR A 301 N VAL A 251 SHEET 1 AA8 4 PHE A 294 VAL A 296 0 SHEET 2 AA8 4 LEU A 268 ILE A 274 -1 N PHE A 270 O VAL A 296 SHEET 3 AA8 4 VAL A 310 ASP A 316 -1 O GLN A 315 N LYS A 269 SHEET 4 AA8 4 ALA A 327 VAL A 329 -1 O VAL A 329 N VAL A 310 SHEET 1 AA9 6 TRP B 24 GLU B 27 0 SHEET 2 AA9 6 VAL B 30 ASP B 36 -1 O VAL B 32 N TRP B 24 SHEET 3 AA9 6 GLU B 95 GLU B 108 1 O HIS B 101 N TYR B 31 SHEET 4 AA9 6 GLY B 86 LYS B 92 -1 N CYS B 90 O SER B 98 SHEET 5 AA9 6 ILE B 58 SER B 62 -1 N THR B 59 O HIS B 91 SHEET 6 AA9 6 VAL B 68 SER B 71 -1 O GLY B 70 N TRP B 60 SHEET 1 AB1 4 TRP B 24 GLU B 27 0 SHEET 2 AB1 4 VAL B 30 ASP B 36 -1 O VAL B 32 N TRP B 24 SHEET 3 AB1 4 GLU B 95 GLU B 108 1 O HIS B 101 N TYR B 31 SHEET 4 AB1 4 ILE B 111 TRP B 112 -1 O ILE B 111 N GLU B 108 SHEET 1 AB2 2 GLU B 44 THR B 49 0 SHEET 2 AB2 2 THR B 74 VAL B 79 -1 O LEU B 75 N LEU B 48 SHEET 1 AB3 4 LEU B 117 LYS B 118 0 SHEET 2 AB3 4 ARG B 136 VAL B 143 -1 O LEU B 142 N LYS B 118 SHEET 3 AB3 4 ARG B 182 GLU B 193 -1 O CYS B 191 N PHE B 137 SHEET 4 AB3 4 VAL B 165 CYS B 167 -1 N THR B 166 O GLN B 192 SHEET 1 AB4 4 LYS B 127 GLU B 129 0 SHEET 2 AB4 4 ARG B 136 VAL B 143 -1 O THR B 138 N GLU B 129 SHEET 3 AB4 4 ARG B 182 GLU B 193 -1 O CYS B 191 N PHE B 137 SHEET 4 AB4 4 SER B 171 LEU B 179 -1 N VAL B 177 O TYR B 184 SHEET 1 AB5 3 LEU B 149 SER B 155 0 SHEET 2 AB5 3 ILE B 206 GLN B 214 -1 O GLU B 211 N ASN B 152 SHEET 3 AB5 3 LYS B 217 PHE B 225 -1 O TYR B 221 N LEU B 210 SHEET 1 AB6 3 LYS B 237 LYS B 245 0 SHEET 2 AB6 3 GLN B 248 GLU B 254 -1 O GLU B 250 N LYS B 242 SHEET 3 AB6 3 SER B 300 VAL B 303 -1 O THR B 301 N VAL B 251 SHEET 1 AB7 4 PHE B 294 VAL B 296 0 SHEET 2 AB7 4 LEU B 268 GLN B 275 -1 N PHE B 270 O VAL B 296 SHEET 3 AB7 4 ASN B 309 ASP B 316 -1 O GLN B 315 N LYS B 269 SHEET 4 AB7 4 ALA B 327 PRO B 330 -1 O VAL B 329 N VAL B 310 SSBOND 1 CYS A 50 CYS A 90 1555 1555 2.04 SSBOND 2 CYS A 128 CYS A 139 1555 1555 2.03 SSBOND 3 CYS A 167 CYS A 191 1555 1555 2.04 SSBOND 4 CYS A 197 CYS B 197 1555 1555 2.03 SSBOND 5 CYS A 288 CYS A 323 1555 1555 2.03 SSBOND 6 CYS A 305 CYS A 331 1555 1555 2.04 SSBOND 7 CYS A 311 CYS A 328 1555 1555 2.03 SSBOND 8 CYS B 50 CYS B 90 1555 1555 2.04 SSBOND 9 CYS B 128 CYS B 139 1555 1555 2.04 SSBOND 10 CYS B 167 CYS B 191 1555 1555 2.04 SSBOND 11 CYS B 288 CYS B 323 1555 1555 2.04 SSBOND 12 CYS B 305 CYS B 331 1555 1555 2.04 SSBOND 13 CYS B 311 CYS B 328 1555 1555 2.03 LINK ND2 ASN A 220 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 220 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.37 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.37 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.37 LINK O3 BMA C 3 C1 MAN C 6 1555 1555 1.37 LINK O3 MAN C 4 C1 MAN C 5 1555 1555 1.37 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.37 LINK O6 BMA D 3 C1 MAN D 4 1555 1555 1.38 LINK O3 BMA D 3 C1 MAN D 6 1555 1555 1.38 LINK O3 MAN D 4 C1 MAN D 5 1555 1555 1.37 CISPEP 1 THR A 261 PRO A 262 0 -0.93 CISPEP 2 THR B 261 PRO B 262 0 -1.23 CRYST1 53.800 176.140 54.370 90.00 108.96 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018587 0.000000 0.006387 0.00000 SCALE2 0.000000 0.005677 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019448 0.00000