HEADER GENE REGULATION 20-SEP-19 6SWG TITLE CRYSTAL STRUCTURE OF THE TASOR-PERIPHILIN CORE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPHILIN-1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: TASOR BINDING REGION OF PERIPHILIN (RESIDUES 292-367); COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROTEIN TASOR; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: PERIPHILIN BINDING REGION OF TASOR (RESIDUES 1014- COMPND 11 1095) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: ISOFORM 2 (IDENTIFIER: Q8NEY8-2); SOURCE 6 GENE: PPHLN1, HSPC206, HSPC232; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 VARIANT: ISOFORM 1; SOURCE 14 GENE: TASOR, C3ORF63, FAM208A, KIAA1105; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS NUCLEAR PROTEIN; TRANSCRIPTIONAL REPRESSOR; EPIGENETIC SILENCING; KEYWDS 2 HISTONE H3 LYSINE 9 METHYLATION (H3K9ME3); TRANSPOSABLE ELEMENT; KEYWDS 3 LINE1 ELEMENT; LOW-COMPLEXITY SEQUENCE; LIQUID-LIQUID PHASE KEYWDS 4 SEPARATION (LLPS); MEMBRANE-LESS COMPARTMENT; RNA-BINDING PROTEIN, KEYWDS 5 GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR D.M.PRIGOZHIN,S.M.V.FREUND,Y.MODIS REVDAT 6 15-MAY-24 6SWG 1 JRNL REVDAT 5 21-OCT-20 6SWG 1 JRNL REVDAT 4 07-OCT-20 6SWG 1 JRNL REVDAT 3 16-SEP-20 6SWG 1 JRNL REVDAT 2 12-AUG-20 6SWG 1 SEQRES REVDAT 1 05-AUG-20 6SWG 0 JRNL AUTH D.M.PRIGOZHIN,C.H.DOUSE,L.E.FARLEIGH,A.ALBECKA, JRNL AUTH 2 I.A.TCHASOVNIKAROVA,R.T.TIMMS,S.I.ODA,F.ADOLF,S.M.V.FREUND, JRNL AUTH 3 S.MASLEN,P.J.LEHNER,Y.MODIS JRNL TITL PERIPHILIN SELF-ASSOCIATION UNDERPINS EPIGENETIC SILENCING JRNL TITL 2 BY THE HUSH COMPLEX. JRNL REF NUCLEIC ACIDS RES. V. 48 10313 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32976585 JRNL DOI 10.1093/NAR/GKAA785 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.M.PRIGOZHIN,A.ALBECKA,C.H.DOUSE,I.A.TCHASOVNIKAROVA, REMARK 1 AUTH 2 R.T.TIMMS,L.E.FARLEIGH,S.M.V.FREUND,P.J.LEHNER,Y.MODIS REMARK 1 TITL TASOR IS A PSEUDO-PARP THAT DIRECTS HUSH COMPLEX ASSEMBLY REMARK 1 TITL 2 AND EPIGENETIC TRANSPOSON CONTROL REMARK 1 REF BIORXIV 2020 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2020.03.09.974832V1 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9800 - 4.5601 1.00 2470 160 0.2119 0.2442 REMARK 3 2 4.5601 - 3.6202 1.00 2375 132 0.2029 0.2579 REMARK 3 3 3.6202 - 3.1628 1.00 2359 129 0.2601 0.3268 REMARK 3 4 3.1628 - 2.8737 1.00 2377 114 0.2954 0.3599 REMARK 3 5 2.8737 - 2.6677 1.00 2349 118 0.3048 0.3353 REMARK 3 6 2.6677 - 2.5105 1.00 2349 132 0.2983 0.3794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 123.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.5821 33.4017 37.9641 REMARK 3 T TENSOR REMARK 3 T11: 0.7502 T22: 0.8071 REMARK 3 T33: 1.0617 T12: -0.0394 REMARK 3 T13: 0.1683 T23: -0.0560 REMARK 3 L TENSOR REMARK 3 L11: 0.9943 L22: 0.8302 REMARK 3 L33: 1.1216 L12: 0.4528 REMARK 3 L13: 0.2703 L23: 1.1368 REMARK 3 S TENSOR REMARK 3 S11: 0.2581 S12: -0.1267 S13: -0.1105 REMARK 3 S21: -0.1658 S22: -0.5078 S23: 0.8445 REMARK 3 S31: 0.3448 S32: -0.0067 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.7720 38.1030 29.9595 REMARK 3 T TENSOR REMARK 3 T11: 0.9193 T22: 0.7267 REMARK 3 T33: 1.0905 T12: 0.0148 REMARK 3 T13: 0.0049 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.1916 L22: 2.1716 REMARK 3 L33: 2.6773 L12: -0.5559 REMARK 3 L13: -0.8221 L23: 1.8360 REMARK 3 S TENSOR REMARK 3 S11: 0.4969 S12: 0.4834 S13: 0.5543 REMARK 3 S21: -1.2654 S22: -0.6378 S23: -0.3733 REMARK 3 S31: -0.3408 S32: 0.1070 S33: -0.0049 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 294 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.7487 16.0418 32.9149 REMARK 3 T TENSOR REMARK 3 T11: 0.9720 T22: 0.9125 REMARK 3 T33: 0.9192 T12: -0.0252 REMARK 3 T13: 0.0829 T23: -0.0413 REMARK 3 L TENSOR REMARK 3 L11: 2.2555 L22: 0.4542 REMARK 3 L33: 0.7801 L12: 0.6703 REMARK 3 L13: -0.4898 L23: -0.5753 REMARK 3 S TENSOR REMARK 3 S11: 0.3952 S12: 0.5146 S13: 0.5213 REMARK 3 S21: 0.4285 S22: 0.0541 S23: 0.2585 REMARK 3 S31: -0.5644 S32: -0.7834 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 331 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.0169 8.0515 34.5141 REMARK 3 T TENSOR REMARK 3 T11: 1.1690 T22: 0.8953 REMARK 3 T33: 1.0356 T12: -0.0808 REMARK 3 T13: 0.1380 T23: -0.0606 REMARK 3 L TENSOR REMARK 3 L11: 1.7218 L22: 0.9042 REMARK 3 L33: 1.3402 L12: 1.4705 REMARK 3 L13: -2.6596 L23: -2.6666 REMARK 3 S TENSOR REMARK 3 S11: -0.4861 S12: -0.2663 S13: -0.8877 REMARK 3 S21: -0.3479 S22: -0.3961 S23: -0.9397 REMARK 3 S31: 0.3077 S32: 0.3888 S33: 0.0028 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1014 THROUGH 1043 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1514 40.2264 39.1861 REMARK 3 T TENSOR REMARK 3 T11: 1.0972 T22: 0.8768 REMARK 3 T33: 1.0592 T12: -0.0151 REMARK 3 T13: 0.0969 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.9257 L22: 2.9531 REMARK 3 L33: 0.5012 L12: 1.9014 REMARK 3 L13: 1.6467 L23: 2.7741 REMARK 3 S TENSOR REMARK 3 S11: -0.5934 S12: -0.7027 S13: 0.6181 REMARK 3 S21: 0.0990 S22: 1.0902 S23: -0.3295 REMARK 3 S31: -0.1125 S32: 0.4739 S33: -0.0036 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1044 THROUGH 1074 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2142 29.0577 41.4804 REMARK 3 T TENSOR REMARK 3 T11: 1.4133 T22: 1.2024 REMARK 3 T33: 0.9187 T12: -0.3200 REMARK 3 T13: 0.3710 T23: -0.1497 REMARK 3 L TENSOR REMARK 3 L11: 4.0796 L22: 4.9333 REMARK 3 L33: 8.1611 L12: 1.0365 REMARK 3 L13: 3.9154 L23: 6.2780 REMARK 3 S TENSOR REMARK 3 S11: 0.5434 S12: -1.3844 S13: -1.8747 REMARK 3 S21: 2.0797 S22: 0.5016 S23: -1.0742 REMARK 3 S31: 3.2094 S32: -0.6089 S33: 1.6136 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1075 THROUGH 1093 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.7426 4.2983 30.5210 REMARK 3 T TENSOR REMARK 3 T11: 1.4043 T22: 1.1943 REMARK 3 T33: 0.8951 T12: -0.0805 REMARK 3 T13: 0.0060 T23: -0.1135 REMARK 3 L TENSOR REMARK 3 L11: 2.7493 L22: 0.5817 REMARK 3 L33: 1.4699 L12: -0.0628 REMARK 3 L13: -0.4596 L23: -0.5209 REMARK 3 S TENSOR REMARK 3 S11: -0.1103 S12: 1.7409 S13: 1.2885 REMARK 3 S21: -0.9773 S22: 0.9239 S23: 0.6012 REMARK 3 S31: 0.2025 S32: -0.7572 S33: 0.0180 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 295 OR RESID 297 REMARK 3 THROUGH 298 OR RESID 300 THROUGH 312 OR REMARK 3 RESID 314 THROUGH 341 OR RESID 343 REMARK 3 THROUGH 357 OR RESID 359 THROUGH 365)) REMARK 3 SELECTION : (CHAIN B AND (RESID 295 OR RESID 297 REMARK 3 THROUGH 298 OR RESID 300 THROUGH 312 OR REMARK 3 RESID 314 THROUGH 341 OR RESID 343 REMARK 3 THROUGH 357 OR RESID 359 THROUGH 365)) REMARK 3 ATOM PAIRS NUMBER : 578 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SWG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 - 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : SINGLE BOUNCE MONOCHROMATOR REMARK 200 OPTICS : TORROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION 11 REMARK 200 DATA SCALING SOFTWARE : AIMLESS VERSION 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15081 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 41.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 1.08700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 VERSION 2.0.148 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: HEXAGONAL RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SULFATE, 100 MM SODIUM REMARK 280 CITRATE; PROTEIN BUFFER: PBS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.64667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.32333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.32333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.64667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 274 REMARK 465 GLY A 275 REMARK 465 SER A 276 REMARK 465 SER A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 SER A 284 REMARK 465 GLN A 285 REMARK 465 GLU A 286 REMARK 465 ASN A 287 REMARK 465 LEU A 288 REMARK 465 TYR A 289 REMARK 465 PHE A 290 REMARK 465 GLN A 291 REMARK 465 SER A 292 REMARK 465 GLN A 293 REMARK 465 LEU A 294 REMARK 465 THR A 367 REMARK 465 MET B 274 REMARK 465 GLY B 275 REMARK 465 SER B 276 REMARK 465 SER B 277 REMARK 465 HIS B 278 REMARK 465 HIS B 279 REMARK 465 HIS B 280 REMARK 465 HIS B 281 REMARK 465 HIS B 282 REMARK 465 HIS B 283 REMARK 465 SER B 284 REMARK 465 GLN B 285 REMARK 465 GLU B 286 REMARK 465 ASN B 287 REMARK 465 LEU B 288 REMARK 465 TYR B 289 REMARK 465 PHE B 290 REMARK 465 GLN B 291 REMARK 465 SER B 292 REMARK 465 GLN B 293 REMARK 465 MET C 1013 REMARK 465 GLN C 1055 REMARK 465 GLU C 1056 REMARK 465 LYS C 1057 REMARK 465 MET C 1058 REMARK 465 LYS C 1059 REMARK 465 ARG C 1060 REMARK 465 LEU C 1061 REMARK 465 SER C 1062 REMARK 465 GLU C 1063 REMARK 465 PHE C 1064 REMARK 465 ILE C 1065 REMARK 465 TYR C 1066 REMARK 465 SER C 1067 REMARK 465 LYS C 1068 REMARK 465 THR C 1069 REMARK 465 SER C 1070 REMARK 465 LYS C 1071 REMARK 465 ALA C 1094 REMARK 465 LYS C 1095 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 354 HH21 ARG C 1030 4456 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 294 CA - CB - CG ANGL. DEV. = 19.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 364 30.60 -87.02 REMARK 500 SER B 366 24.59 -156.40 REMARK 500 VAL C1041 -148.46 47.15 REMARK 500 SER C1042 -178.04 90.87 REMARK 500 THR C1046 29.99 -141.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 1101 DBREF 6SWG A 292 367 UNP Q8NEY8 PPHLN_HUMAN 292 367 DBREF 6SWG B 292 367 UNP Q8NEY8 PPHLN_HUMAN 292 367 DBREF 6SWG C 1014 1095 UNP Q9UK61 TASOR_HUMAN 1014 1095 SEQADV 6SWG MET A 274 UNP Q8NEY8 INITIATING METHIONINE SEQADV 6SWG GLY A 275 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER A 276 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER A 277 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 278 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 279 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 280 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 281 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 282 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS A 283 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER A 284 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLN A 285 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLU A 286 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG ASN A 287 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG LEU A 288 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG TYR A 289 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG PHE A 290 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLN A 291 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG MET B 274 UNP Q8NEY8 INITIATING METHIONINE SEQADV 6SWG GLY B 275 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER B 276 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER B 277 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 278 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 279 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 280 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 281 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 282 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG HIS B 283 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG SER B 284 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLN B 285 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLU B 286 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG ASN B 287 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG LEU B 288 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG TYR B 289 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG PHE B 290 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG GLN B 291 UNP Q8NEY8 EXPRESSION TAG SEQADV 6SWG MET C 1013 UNP Q9UK61 INITIATING METHIONINE SEQRES 1 A 94 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLU SEQRES 2 A 94 ASN LEU TYR PHE GLN SER GLN LEU THR THR ARG SER LYS SEQRES 3 A 94 ALA ILE ALA SER LYS THR LYS GLU ILE GLU GLN VAL TYR SEQRES 4 A 94 ARG GLN ASP CYS GLU THR PHE GLY MET VAL VAL LYS MET SEQRES 5 A 94 LEU ILE GLU LYS ASP PRO SER LEU GLU LYS SER ILE GLN SEQRES 6 A 94 PHE ALA LEU ARG GLN ASN LEU HIS GLU ILE GLY GLU ARG SEQRES 7 A 94 CYS VAL GLU GLU LEU LYS HIS PHE ILE ALA GLU TYR ASP SEQRES 8 A 94 THR SER THR SEQRES 1 B 94 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLU SEQRES 2 B 94 ASN LEU TYR PHE GLN SER GLN LEU THR THR ARG SER LYS SEQRES 3 B 94 ALA ILE ALA SER LYS THR LYS GLU ILE GLU GLN VAL TYR SEQRES 4 B 94 ARG GLN ASP CYS GLU THR PHE GLY MET VAL VAL LYS MET SEQRES 5 B 94 LEU ILE GLU LYS ASP PRO SER LEU GLU LYS SER ILE GLN SEQRES 6 B 94 PHE ALA LEU ARG GLN ASN LEU HIS GLU ILE GLY GLU ARG SEQRES 7 B 94 CYS VAL GLU GLU LEU LYS HIS PHE ILE ALA GLU TYR ASP SEQRES 8 B 94 THR SER THR SEQRES 1 C 83 MET SER GLU THR THR GLU ARG THR VAL LEU GLY GLU TYR SEQRES 2 C 83 ASN LEU PHE SER ARG LYS ILE GLU GLU ILE LEU LYS GLN SEQRES 3 C 83 LYS ASN VAL SER TYR VAL SER THR VAL SER THR PRO ILE SEQRES 4 C 83 PHE SER THR GLN GLU LYS MET LYS ARG LEU SER GLU PHE SEQRES 5 C 83 ILE TYR SER LYS THR SER LYS ALA GLY VAL GLN GLU PHE SEQRES 6 C 83 VAL ASP GLY LEU HIS GLU LYS LEU ASN THR ILE ILE ILE SEQRES 7 C 83 LYS ALA SER ALA LYS HET SO4 C1101 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 O4 S 2- HELIX 1 AA1 ARG A 297 ASP A 330 1 34 HELIX 2 AA2 SER A 332 ASP A 364 1 33 HELIX 3 AA3 THR B 295 ASP B 330 1 36 HELIX 4 AA4 LEU B 333 THR B 367 1 35 HELIX 5 AA5 GLU C 1015 LYS C 1039 1 25 HELIX 6 AA6 VAL C 1074 ALA C 1092 1 19 CISPEP 1 LYS C 1039 ASN C 1040 0 -3.86 SITE 1 AC1 3 THR B 295 ARG B 297 ARG C1019 CRYST1 93.570 93.570 84.970 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010687 0.006170 0.000000 0.00000 SCALE2 0.000000 0.012340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011769 0.00000