HEADER TRANSCRIPTION 05-OCT-19 6T1S TITLE PPAR MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPARG, NR1C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NUCLEAR RECEPTOR, TRANSCRPTION FACTOR, COMPLEX, NUCLEAR PROTEIN, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.ROCHEL REVDAT 2 24-JAN-24 6T1S 1 REMARK REVDAT 1 14-APR-21 6T1S 0 JRNL AUTH N.ROCHEL JRNL TITL STRUCTURE OF PPARG MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.9700 - 3.1500 1.00 2743 147 0.1638 0.2157 REMARK 3 2 3.1500 - 2.7500 1.00 2704 144 0.1793 0.2190 REMARK 3 3 2.7500 - 2.5000 1.00 2684 144 0.1678 0.1998 REMARK 3 4 2.5000 - 2.3200 1.00 2658 143 0.1637 0.1860 REMARK 3 5 2.3200 - 2.1800 1.00 2666 142 0.1635 0.2002 REMARK 3 6 2.1800 - 2.0700 1.00 2649 141 0.1683 0.1883 REMARK 3 7 2.0700 - 1.9800 1.00 2633 142 0.1778 0.2164 REMARK 3 8 1.9800 - 1.9100 1.00 2621 140 0.1913 0.2306 REMARK 3 9 1.9100 - 1.8400 1.00 2601 139 0.2146 0.2598 REMARK 3 10 1.8400 - 1.7800 1.00 2610 140 0.2515 0.3034 REMARK 3 11 1.7800 - 1.7300 1.00 2646 141 0.2876 0.3660 REMARK 3 12 1.7300 - 1.6900 1.00 2597 139 0.2829 0.2950 REMARK 3 13 1.6900 - 1.6500 0.96 2527 135 0.3113 0.3333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.223 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.941 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2326 REMARK 3 ANGLE : 1.151 3144 REMARK 3 CHIRALITY : 0.052 359 REMARK 3 PLANARITY : 0.007 428 REMARK 3 DIHEDRAL : 13.536 1451 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6681 -24.0105 26.6080 REMARK 3 T TENSOR REMARK 3 T11: 0.3610 T22: 0.2483 REMARK 3 T33: 0.2586 T12: -0.0854 REMARK 3 T13: -0.0229 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 2.2808 L22: 6.7972 REMARK 3 L33: 4.1101 L12: -2.4229 REMARK 3 L13: 1.0106 L23: -2.6474 REMARK 3 S TENSOR REMARK 3 S11: 0.1166 S12: -0.0115 S13: -0.1908 REMARK 3 S21: -0.2898 S22: -0.1174 S23: 0.2263 REMARK 3 S31: 0.3979 S32: -0.2237 S33: -0.1016 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7342 -0.0199 7.3964 REMARK 3 T TENSOR REMARK 3 T11: 0.5472 T22: 0.4788 REMARK 3 T33: 0.3793 T12: 0.0117 REMARK 3 T13: -0.0605 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 8.5650 L22: 2.7849 REMARK 3 L33: 6.8074 L12: 0.8518 REMARK 3 L13: -2.0296 L23: 3.0424 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: 0.4898 S13: -0.3762 REMARK 3 S21: -1.2396 S22: -0.4933 S23: 0.7855 REMARK 3 S31: 0.4103 S32: -0.3653 S33: 0.4213 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4107 3.8816 10.7264 REMARK 3 T TENSOR REMARK 3 T11: 0.6861 T22: 0.9765 REMARK 3 T33: 1.3855 T12: 0.1328 REMARK 3 T13: -0.0801 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 4.2082 L22: 3.3534 REMARK 3 L33: 7.0219 L12: 3.4188 REMARK 3 L13: 1.5499 L23: -0.4005 REMARK 3 S TENSOR REMARK 3 S11: -0.1484 S12: -0.1505 S13: -1.7188 REMARK 3 S21: -0.8074 S22: -0.1123 S23: 1.5471 REMARK 3 S31: 0.7417 S32: -0.8238 S33: 0.2326 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5919 -5.8111 21.1158 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.4682 REMARK 3 T33: 0.4651 T12: -0.0171 REMARK 3 T13: -0.0200 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 3.8834 L22: 1.8866 REMARK 3 L33: 4.7198 L12: -2.4376 REMARK 3 L13: 2.8801 L23: -2.3449 REMARK 3 S TENSOR REMARK 3 S11: 0.1460 S12: -0.0269 S13: -0.0656 REMARK 3 S21: -0.7493 S22: 0.2381 S23: 1.0147 REMARK 3 S31: 0.3024 S32: -0.6124 S33: -0.7505 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2248 -15.3705 34.0768 REMARK 3 T TENSOR REMARK 3 T11: 0.2312 T22: 0.3822 REMARK 3 T33: 0.3333 T12: -0.1112 REMARK 3 T13: 0.0175 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.9950 L22: 3.7913 REMARK 3 L33: 2.5447 L12: 0.6071 REMARK 3 L13: -0.6196 L23: -1.3666 REMARK 3 S TENSOR REMARK 3 S11: 0.0977 S12: -0.2570 S13: -0.2476 REMARK 3 S21: 0.2310 S22: -0.0405 S23: 0.5972 REMARK 3 S31: 0.1704 S32: -0.6568 S33: -0.0324 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 362 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0465 3.2493 18.3419 REMARK 3 T TENSOR REMARK 3 T11: 0.2858 T22: 0.3513 REMARK 3 T33: 0.2841 T12: 0.0090 REMARK 3 T13: -0.0275 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 7.3140 L22: 4.5076 REMARK 3 L33: 3.6160 L12: -1.1633 REMARK 3 L13: -1.8931 L23: -0.3630 REMARK 3 S TENSOR REMARK 3 S11: 0.2808 S12: -0.0085 S13: 0.2128 REMARK 3 S21: 0.1598 S22: -0.1775 S23: 0.3687 REMARK 3 S31: 0.0265 S32: -0.5901 S33: -0.0064 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 393 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8300 -1.8646 27.5749 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: 0.2830 REMARK 3 T33: 0.3184 T12: -0.0247 REMARK 3 T13: -0.0046 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 4.7238 L22: 5.4432 REMARK 3 L33: 9.0174 L12: -5.0755 REMARK 3 L13: 6.3539 L23: -6.8850 REMARK 3 S TENSOR REMARK 3 S11: -0.3408 S12: -0.2792 S13: 0.2970 REMARK 3 S21: 0.3938 S22: 0.1151 S23: -0.3164 REMARK 3 S31: -0.4239 S32: -0.2361 S33: 0.2130 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 458 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1001 -18.7513 36.9301 REMARK 3 T TENSOR REMARK 3 T11: 0.2757 T22: 0.2401 REMARK 3 T33: 0.2476 T12: -0.0751 REMARK 3 T13: -0.0103 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 4.5136 L22: 2.1790 REMARK 3 L33: 3.7535 L12: -0.5654 REMARK 3 L13: -1.4746 L23: -0.0664 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: -0.2136 S13: -0.0728 REMARK 3 S21: 0.1440 S22: -0.0297 S23: 0.1841 REMARK 3 S31: 0.1921 S32: -0.2051 S33: 0.0343 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 459 THROUGH 487 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0182 -1.4720 35.0181 REMARK 3 T TENSOR REMARK 3 T11: 0.2687 T22: 0.3488 REMARK 3 T33: 0.3451 T12: 0.0038 REMARK 3 T13: 0.0555 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 3.4967 L22: 2.2969 REMARK 3 L33: 5.7676 L12: -0.6808 REMARK 3 L13: 3.6511 L23: -2.9056 REMARK 3 S TENSOR REMARK 3 S11: -0.3601 S12: -0.6335 S13: 0.5418 REMARK 3 S21: 0.5104 S22: 0.4208 S23: 0.2499 REMARK 3 S31: -0.5254 S32: -0.8050 S33: -0.0537 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 488 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3408 -2.5566 30.7676 REMARK 3 T TENSOR REMARK 3 T11: 0.1803 T22: 0.7998 REMARK 3 T33: 0.7986 T12: 0.1503 REMARK 3 T13: -0.0163 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 6.4801 L22: 5.6442 REMARK 3 L33: 9.6397 L12: 1.4436 REMARK 3 L13: 2.2518 L23: 0.1015 REMARK 3 S TENSOR REMARK 3 S11: -0.2459 S12: 0.7244 S13: 0.2929 REMARK 3 S21: 0.2649 S22: 0.0364 S23: 1.7478 REMARK 3 S31: -1.1513 S32: -1.5061 S33: -0.1792 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T1S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39355 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.646 REMARK 200 RESOLUTION RANGE LOW (A) : 49.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.00959 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4XLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350, 0.2 M LISO4, BISTRIS 0.1M REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.76000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.33000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.38000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.33000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 127.14000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.33000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.33000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.38000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.33000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.33000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 127.14000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.76000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.76000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 227 REMARK 465 SER A 228 REMARK 465 HIS A 229 REMARK 465 GLY A 267 REMARK 465 LYS A 268 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 397 O HOH A 701 2.05 REMARK 500 OG1 THR A 475 O HOH A 702 2.14 REMARK 500 O HOH A 710 O HOH A 783 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 262 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 270 -178.92 -173.83 REMARK 500 HIS A 294 60.02 62.45 REMARK 500 ASN A 363 -169.06 -128.48 REMARK 500 LEU A 421 51.29 -92.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDK A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 DBREF 6T1S A 231 505 UNP P37231 PPARG_HUMAN 231 505 SEQADV 6T1S GLY A 227 UNP P37231 EXPRESSION TAG SEQADV 6T1S SER A 228 UNP P37231 EXPRESSION TAG SEQADV 6T1S HIS A 229 UNP P37231 EXPRESSION TAG SEQADV 6T1S MET A 230 UNP P37231 EXPRESSION TAG SEQADV 6T1S SER A 310 UNP P37231 PHE 310 ENGINEERED MUTATION SEQRES 1 A 279 GLY SER HIS MET GLN LEU ASN PRO GLU SER ALA ASP LEU SEQRES 2 A 279 ARG ALA LEU ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SEQRES 3 A 279 SER PHE PRO LEU THR LYS ALA LYS ALA ARG ALA ILE LEU SEQRES 4 A 279 THR GLY LYS THR THR ASP LYS SER PRO PHE VAL ILE TYR SEQRES 5 A 279 ASP MET ASN SER LEU MET MET GLY GLU ASP LYS ILE LYS SEQRES 6 A 279 PHE LYS HIS ILE THR PRO LEU GLN GLU GLN SER LYS GLU SEQRES 7 A 279 VAL ALA ILE ARG ILE SER GLN GLY CYS GLN PHE ARG SER SEQRES 8 A 279 VAL GLU ALA VAL GLN GLU ILE THR GLU TYR ALA LYS SER SEQRES 9 A 279 ILE PRO GLY PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL SEQRES 10 A 279 THR LEU LEU LYS TYR GLY VAL HIS GLU ILE ILE TYR THR SEQRES 11 A 279 MET LEU ALA SER LEU MET ASN LYS ASP GLY VAL LEU ILE SEQRES 12 A 279 SER GLU GLY GLN GLY PHE MET THR ARG GLU PHE LEU LYS SEQRES 13 A 279 SER LEU ARG LYS PRO PHE GLY ASP PHE MET GLU PRO LYS SEQRES 14 A 279 PHE GLU PHE ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP SEQRES 15 A 279 ASP SER ASP LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SEQRES 16 A 279 SER GLY ASP ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE SEQRES 17 A 279 GLU ASP ILE GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU SEQRES 18 A 279 GLN LEU LYS LEU ASN HIS PRO GLU SER SER GLN LEU PHE SEQRES 19 A 279 ALA LYS LEU LEU GLN LYS MET THR ASP LEU ARG GLN ILE SEQRES 20 A 279 VAL THR GLU HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS SEQRES 21 A 279 THR GLU THR ASP MET SER LEU HIS PRO LEU LEU GLN GLU SEQRES 22 A 279 ILE TYR LYS ASP LEU TYR HET EDK A 601 66 HET SO4 A 602 5 HET SO4 A 603 5 HETNAM EDK (2~{S})-3-[4-[2-[METHYL(PYRIDIN-2-YL) HETNAM 2 EDK AMINO]ETHOXY]PHENYL]-2-[[2-(PHENYLCARBONYL) HETNAM 3 EDK PHENYL]AMINO]PROPANOIC ACID HETNAM SO4 SULFATE ION FORMUL 2 EDK C30 H29 N3 O4 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *235(H2 O) HELIX 1 AA1 ASN A 233 PHE A 254 1 22 HELIX 2 AA2 THR A 257 THR A 266 1 10 HELIX 3 AA3 ASP A 279 GLY A 286 1 8 HELIX 4 AA4 GLU A 300 SER A 330 1 31 HELIX 5 AA5 GLY A 333 LEU A 337 5 5 HELIX 6 AA6 ASP A 338 LEU A 361 1 24 HELIX 7 AA7 SER A 370 GLY A 372 5 3 HELIX 8 AA8 ARG A 378 SER A 383 1 6 HELIX 9 AA9 PRO A 387 PHE A 391 5 5 HELIX 10 AB1 MET A 392 ALA A 404 1 13 HELIX 11 AB2 ASP A 408 LEU A 421 1 14 HELIX 12 AB3 ASN A 430 HIS A 453 1 24 HELIX 13 AB4 GLN A 458 GLU A 488 1 31 HELIX 14 AB5 HIS A 494 LYS A 502 1 9 SHEET 1 AA1 3 PHE A 275 ILE A 277 0 SHEET 2 AA1 3 GLY A 374 THR A 377 1 O PHE A 375 N ILE A 277 SHEET 3 AA1 3 GLY A 366 ILE A 369 -1 N VAL A 367 O MET A 376 CISPEP 1 LYS A 386 PRO A 387 0 1.16 SITE 1 AC1 13 SER A 310 CYS A 313 SER A 317 HIS A 351 SITE 2 AC1 13 ILE A 369 PHE A 388 PHE A 391 HIS A 477 SITE 3 AC1 13 LEU A 493 LEU A 497 TYR A 501 HOH A 798 SITE 4 AC1 13 HOH A 833 SITE 1 AC2 7 TYR A 247 ASP A 408 ASP A 409 SER A 410 SITE 2 AC2 7 HOH A 724 HOH A 780 HOH A 838 SITE 1 AC3 4 GLN A 443 SER A 457 GLN A 458 HOH A 763 CRYST1 60.660 60.660 169.520 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016485 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005899 0.00000