HEADER HYDROLASE 18-OCT-19 6T6H TITLE APO STRUCTURE OF THE BOTTROMYCIN EPIMERASE BOTH COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. BC16019; SOURCE 3 ORGANISM_TAXID: 1109705; SOURCE 4 GENE: BOTH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 KEYWDS BOTTROMYCIN, RIPP, EPIMERASE, ABH, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOEHNKE,A.SIKANDAR REVDAT 2 26-AUG-20 6T6H 1 JRNL REVDAT 1 15-JUL-20 6T6H 0 JRNL AUTH A.SIKANDAR,L.FRANZ,S.ADAM,J.SANTOS-ABERTURAS,L.HORBAL, JRNL AUTH 2 A.LUZHETSKYY,A.W.TRUMAN,O.V.KALININA,J.KOEHNKE JRNL TITL THE BOTTROMYCIN EPIMERASE BOTH DEFINES A GROUP OF ATYPICAL JRNL TITL 2 ALPHA / BETA-HYDROLASE-FOLD ENZYMES. JRNL REF NAT.CHEM.BIOL. V. 16 1013 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32601484 JRNL DOI 10.1038/S41589-020-0569-Y REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 1.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 77123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 3770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.2600 - 3.5300 1.00 2964 141 0.1551 0.1479 REMARK 3 2 3.5300 - 2.8000 1.00 2853 134 0.1482 0.1412 REMARK 3 3 2.8000 - 2.4500 1.00 2806 152 0.1431 0.1550 REMARK 3 4 2.4500 - 2.2200 1.00 2811 131 0.1326 0.1642 REMARK 3 5 2.2200 - 2.0600 1.00 2786 155 0.1407 0.1505 REMARK 3 6 2.0600 - 1.9400 1.00 2788 140 0.1384 0.1575 REMARK 3 7 1.9400 - 1.8400 1.00 2775 143 0.1453 0.1746 REMARK 3 8 1.8400 - 1.7600 1.00 2784 141 0.1507 0.1495 REMARK 3 9 1.7600 - 1.7000 1.00 2803 131 0.1536 0.1556 REMARK 3 10 1.7000 - 1.6400 1.00 2767 142 0.1512 0.1864 REMARK 3 11 1.6400 - 1.5900 1.00 2754 136 0.1548 0.1601 REMARK 3 12 1.5900 - 1.5400 1.00 2778 128 0.1627 0.1734 REMARK 3 13 1.5400 - 1.5000 1.00 2765 154 0.1645 0.2228 REMARK 3 14 1.5000 - 1.4600 1.00 2756 145 0.1688 0.1777 REMARK 3 15 1.4600 - 1.4300 1.00 2745 126 0.1745 0.2426 REMARK 3 16 1.4300 - 1.4000 0.99 2738 141 0.1818 0.1913 REMARK 3 17 1.4000 - 1.3700 1.00 2757 139 0.1861 0.2261 REMARK 3 18 1.3700 - 1.3500 0.99 2719 176 0.1914 0.2159 REMARK 3 19 1.3500 - 1.3200 0.99 2721 142 0.1945 0.1999 REMARK 3 20 1.3200 - 1.3000 0.99 2718 155 0.2005 0.2158 REMARK 3 21 1.3000 - 1.2800 0.99 2714 148 0.2015 0.2063 REMARK 3 22 1.2800 - 1.2600 0.98 2688 132 0.2008 0.2248 REMARK 3 23 1.2600 - 1.2400 0.97 2671 125 0.2147 0.2229 REMARK 3 24 1.2400 - 1.2200 0.96 2632 131 0.2154 0.2138 REMARK 3 25 1.2200 - 1.2100 0.94 2618 138 0.2336 0.2446 REMARK 3 26 1.2100 - 1.1900 0.94 2560 146 0.2407 0.2622 REMARK 3 27 1.1900 - 1.1800 0.69 1882 98 0.2488 0.2504 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.101 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.669 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1987 REMARK 3 ANGLE : 1.139 2694 REMARK 3 CHIRALITY : 0.092 285 REMARK 3 PLANARITY : 0.010 363 REMARK 3 DIHEDRAL : 14.284 714 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7441 -3.9336 -6.2540 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.0910 REMARK 3 T33: 0.0772 T12: 0.0152 REMARK 3 T13: 0.0113 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.6972 L22: 2.5361 REMARK 3 L33: 1.5475 L12: 1.1712 REMARK 3 L13: -0.0702 L23: 0.1553 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: -0.1170 S13: -0.0444 REMARK 3 S21: 0.0732 S22: -0.0107 S23: 0.1566 REMARK 3 S31: -0.0117 S32: -0.0190 S33: 0.0348 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0130 -15.7428 -12.3032 REMARK 3 T TENSOR REMARK 3 T11: 0.0740 T22: 0.0927 REMARK 3 T33: 0.0872 T12: 0.0127 REMARK 3 T13: 0.0098 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.3323 L22: 3.4726 REMARK 3 L33: 4.2965 L12: -0.0402 REMARK 3 L13: -0.0842 L23: -2.1056 REMARK 3 S TENSOR REMARK 3 S11: -0.0205 S12: -0.0955 S13: -0.0780 REMARK 3 S21: 0.0712 S22: 0.0766 S23: 0.1271 REMARK 3 S31: 0.1017 S32: -0.1105 S33: -0.0631 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5188 -1.6394 -9.8105 REMARK 3 T TENSOR REMARK 3 T11: 0.0946 T22: 0.0668 REMARK 3 T33: 0.0736 T12: 0.0177 REMARK 3 T13: 0.0048 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 1.5362 L22: 2.6471 REMARK 3 L33: 4.3368 L12: 0.1559 REMARK 3 L13: -0.0304 L23: -2.4218 REMARK 3 S TENSOR REMARK 3 S11: -0.0085 S12: -0.0184 S13: 0.0401 REMARK 3 S21: 0.0578 S22: -0.0776 S23: -0.0480 REMARK 3 S31: 0.0288 S32: 0.1352 S33: 0.0705 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6361 -10.6808 -14.5533 REMARK 3 T TENSOR REMARK 3 T11: 0.0849 T22: 0.0968 REMARK 3 T33: 0.1077 T12: 0.0154 REMARK 3 T13: -0.0090 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.4321 L22: 1.5969 REMARK 3 L33: 1.6176 L12: -0.2169 REMARK 3 L13: -0.6587 L23: -0.0991 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: -0.0538 S13: 0.0690 REMARK 3 S21: -0.0436 S22: 0.0078 S23: -0.1448 REMARK 3 S31: -0.0561 S32: 0.1195 S33: 0.0023 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6872 -0.3868 -33.2764 REMARK 3 T TENSOR REMARK 3 T11: 0.1818 T22: 0.2035 REMARK 3 T33: 0.0968 T12: -0.0123 REMARK 3 T13: 0.0204 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 2.3057 L22: 7.0128 REMARK 3 L33: 1.7289 L12: 2.2793 REMARK 3 L13: 1.8681 L23: 2.2265 REMARK 3 S TENSOR REMARK 3 S11: -0.1195 S12: 0.4222 S13: 0.0268 REMARK 3 S21: -0.3337 S22: 0.1162 S23: -0.1325 REMARK 3 S31: -0.0667 S32: 0.2196 S33: 0.0007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9101 -9.8067 -27.6895 REMARK 3 T TENSOR REMARK 3 T11: 0.0868 T22: 0.1033 REMARK 3 T33: 0.0858 T12: -0.0195 REMARK 3 T13: 0.0091 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.5981 L22: 8.5722 REMARK 3 L33: 6.8824 L12: -5.0558 REMARK 3 L13: -1.6872 L23: 5.8872 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.1187 S13: -0.1075 REMARK 3 S21: -0.2498 S22: -0.0289 S23: -0.0325 REMARK 3 S31: 0.0641 S32: -0.0119 S33: 0.0571 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0490 -8.5153 -18.8353 REMARK 3 T TENSOR REMARK 3 T11: 0.1113 T22: 0.1363 REMARK 3 T33: 0.1185 T12: 0.0070 REMARK 3 T13: 0.0025 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.7748 L22: 1.5996 REMARK 3 L33: 0.0591 L12: -0.5363 REMARK 3 L13: -0.0289 L23: -0.1992 REMARK 3 S TENSOR REMARK 3 S11: -0.0587 S12: -0.0636 S13: 0.0679 REMARK 3 S21: 0.0164 S22: 0.0508 S23: -0.2191 REMARK 3 S31: -0.0175 S32: 0.0571 S33: 0.0079 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3209 -20.0752 -21.4381 REMARK 3 T TENSOR REMARK 3 T11: 0.1172 T22: 0.1026 REMARK 3 T33: 0.1371 T12: 0.0295 REMARK 3 T13: 0.0199 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.9531 L22: 1.1426 REMARK 3 L33: 2.0900 L12: 0.6787 REMARK 3 L13: 0.3606 L23: 0.2792 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: 0.0264 S13: -0.0561 REMARK 3 S21: -0.0062 S22: 0.0501 S23: -0.1615 REMARK 3 S31: 0.0860 S32: 0.1727 S33: -0.0513 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2639 -23.4094 -19.5801 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.0784 REMARK 3 T33: 0.1045 T12: 0.0181 REMARK 3 T13: 0.0031 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.7463 L22: 2.9189 REMARK 3 L33: 7.2961 L12: 0.4977 REMARK 3 L13: -1.5391 L23: -2.7887 REMARK 3 S TENSOR REMARK 3 S11: -0.1579 S12: -0.0055 S13: -0.1344 REMARK 3 S21: -0.0720 S22: 0.0785 S23: -0.0183 REMARK 3 S31: 0.1845 S32: -0.1468 S33: 0.0747 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104924. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77123 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.170 REMARK 200 RESOLUTION RANGE LOW (A) : 51.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.63400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL, PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.34150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.06650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.34950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.34150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.06650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.34950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.34150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.06650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.34950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.34150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.06650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.34950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NH1 ARG A 199 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 401 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 533 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 550 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 567 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 637 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 638 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 652 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 712 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ARG A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 GLU A 263 REMARK 465 GLY A 264 REMARK 465 GLY A 265 REMARK 465 HIS A 266 REMARK 465 GLY A 267 REMARK 465 THR A 268 REMARK 465 GLY A 269 REMARK 465 ASP A 270 REMARK 465 ALA A 271 REMARK 465 PRO A 272 REMARK 465 ALA A 273 REMARK 465 GLU A 274 REMARK 465 ALA A 275 REMARK 465 ARG A 276 REMARK 465 THR A 277 REMARK 465 THR A 278 REMARK 465 GLY A 279 REMARK 465 ASP A 280 REMARK 465 ALA A 281 REMARK 465 PRO A 282 REMARK 465 ALA A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 ARG A 286 REMARK 465 ALA A 287 REMARK 465 SER A 288 REMARK 465 GLY A 289 REMARK 465 THR A 290 REMARK 465 GLY A 291 REMARK 465 VAL A 292 REMARK 465 VAL A 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 663 O HOH A 688 1.87 REMARK 500 O HOH A 582 O HOH A 653 1.89 REMARK 500 O HOH A 450 O HOH A 630 1.90 REMARK 500 O HOH A 435 O HOH A 476 1.91 REMARK 500 O HOH A 632 O HOH A 665 1.94 REMARK 500 O HOH A 537 O HOH A 622 1.95 REMARK 500 O HOH A 423 O HOH A 527 1.96 REMARK 500 O HOH A 605 O HOH A 654 2.03 REMARK 500 O HOH A 708 O HOH A 716 2.06 REMARK 500 O HOH A 601 O HOH A 635 2.07 REMARK 500 O HOH A 510 O HOH A 563 2.11 REMARK 500 O HOH A 661 O HOH A 702 2.13 REMARK 500 N ARG A 10 O HOH A 402 2.14 REMARK 500 O HOH A 421 O HOH A 671 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 434 O HOH A 446 4555 1.59 REMARK 500 O HOH A 413 O HOH A 635 2455 1.94 REMARK 500 O HOH A 662 O HOH A 673 8544 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 42 42.94 -95.72 REMARK 500 VAL A 76 -74.23 -127.90 REMARK 500 PHE A 109 -125.39 56.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 717 DISTANCE = 6.19 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 37 O REMARK 620 2 LEU A 65 O 104.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 DBREF 6T6H A 2 293 UNP K4MHV9 K4MHV9_9ACTN 2 293 SEQADV 6T6H HIS A -16 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -15 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -14 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -13 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -12 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -11 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H SER A -10 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H SER A -9 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H GLY A -8 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H LEU A -7 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H VAL A -6 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H PRO A -5 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H ARG A -4 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H GLY A -3 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H SER A -2 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H HIS A -1 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H MET A 0 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6H VAL A 1 UNP K4MHV9 EXPRESSION TAG SEQRES 1 A 310 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 310 GLY SER HIS MET VAL ARG ASP GLY ASN GLY THR SER ARG SEQRES 3 A 310 ARG ASP VAL PHE GLU VAL PHE SER ARG ASP GLY THR PRO SEQRES 4 A 310 ILE ARG GLY PHE SER ARG PRO GLY PRO GLY GLU THR VAL SEQRES 5 A 310 VAL LEU VAL HIS GLY VAL ALA MET ASP ARG ARG ILE TRP SEQRES 6 A 310 ALA GLU SER GLY PHE LEU ASP ALA LEU PRO ASP ALA HIS SEQRES 7 A 310 VAL LEU ALA LEU ASP LEU ARG GLY ARG GLY GLU SER GLY SEQRES 8 A 310 ARG VAL GLY THR ALA GLU GLY HIS ALA LEU ARG ARG TYR SEQRES 9 A 310 VAL GLU ASP VAL ARG ALA VAL LEU ASP ARG PHE GLY ARG SEQRES 10 A 310 ALA ARG TYR SER LEU PHE GLY THR PHE PHE GLY GLY ARG SEQRES 11 A 310 ILE ALA LEU GLN VAL ALA ALA VAL ASP THR ARG VAL ALA SEQRES 12 A 310 ARG ALA PHE SER PHE CYS ALA HIS ALA GLU GLN VAL GLU SEQRES 13 A 310 ILE PRO GLU ASP ALA VAL GLU GLU GLU ALA VAL ALA VAL SEQRES 14 A 310 GLU GLY PRO GLY GLY HIS ALA TYR LEU ARG ASP HIS PHE SEQRES 15 A 310 THR GLY ARG GLY ALA PRO PRO TRP MET VAL GLU ALA CYS SEQRES 16 A 310 ALA ARG VAL ASP PRO GLY GLU LEU GLY ALA ALA THR ARG SEQRES 17 A 310 GLY LEU LEU HIS GLY SER ASP ARG ARG THR GLU ARG GLY SEQRES 18 A 310 HIS PRO ASP GLN GLU LEU VAL LEU ILE THR ALA ASP GLY SEQRES 19 A 310 ASP ALA ASP LEU ALA PRO PHE HIS ALA GLY GLU ARG ARG SEQRES 20 A 310 LEU GLY ALA HIS LEU TRP LEU VAL ASP ALA PRO THR ARG SEQRES 21 A 310 ILE LYS ALA ALA GLY ARG LEU ALA GLU VAL GLY ARG ARG SEQRES 22 A 310 VAL ALA GLY VAL LEU ALA GLU GLY GLY HIS GLY THR GLY SEQRES 23 A 310 ASP ALA PRO ALA GLU ALA ARG THR THR GLY ASP ALA PRO SEQRES 24 A 310 ALA GLU ALA ARG ALA SER GLY THR GLY VAL VAL HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET NA A 305 1 HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 NA NA 1+ FORMUL 7 HOH *317(H2 O) HELIX 1 AA1 ARG A 46 SER A 51 1 6 HELIX 2 AA2 PHE A 53 LEU A 57 5 5 HELIX 3 AA3 ALA A 79 HIS A 82 5 4 HELIX 4 AA4 ALA A 83 GLY A 99 1 17 HELIX 5 AA5 PHE A 109 ASP A 122 1 14 HELIX 6 AA6 PRO A 141 GLY A 154 1 14 HELIX 7 AA7 GLY A 156 ARG A 168 1 13 HELIX 8 AA8 PRO A 171 CYS A 178 1 8 HELIX 9 AA9 ALA A 179 VAL A 181 5 3 HELIX 10 AB1 ASP A 182 LEU A 193 1 12 HELIX 11 AB2 LEU A 221 GLY A 232 1 12 HELIX 12 AB3 THR A 242 ALA A 247 1 6 HELIX 13 AB4 ARG A 249 ALA A 262 1 14 SHEET 1 AA1 8 ASP A 11 PHE A 16 0 SHEET 2 AA1 8 PRO A 22 ARG A 28 -1 O ILE A 23 N VAL A 15 SHEET 3 AA1 8 HIS A 61 LEU A 65 -1 O VAL A 62 N ARG A 28 SHEET 4 AA1 8 THR A 34 VAL A 38 1 N VAL A 35 O LEU A 63 SHEET 5 AA1 8 TYR A 103 THR A 108 1 O PHE A 106 N VAL A 36 SHEET 6 AA1 8 VAL A 125 PHE A 131 1 O PHE A 131 N GLY A 107 SHEET 7 AA1 8 GLU A 209 ALA A 215 1 O VAL A 211 N SER A 130 SHEET 8 AA1 8 HIS A 234 VAL A 238 1 O HIS A 234 N LEU A 212 LINK O LEU A 37 NA NA A 305 1555 1555 2.73 LINK O LEU A 65 NA NA A 305 1555 1555 2.75 SITE 1 AC1 5 ARG A 85 HIS A 195 ARG A 200 HOH A 588 SITE 2 AC1 5 HOH A 599 SITE 1 AC2 7 HIS A 195 ARG A 249 ARG A 255 HOH A 421 SITE 2 AC2 7 HOH A 443 HOH A 532 HOH A 564 SITE 1 AC3 10 ARG A 46 ARG A 180 ASP A 182 PRO A 183 SITE 2 AC3 10 GLY A 184 HOH A 479 HOH A 484 HOH A 487 SITE 3 AC3 10 HOH A 530 HOH A 569 SITE 1 AC4 6 ARG A 18 ARG A 86 HOH A 405 HOH A 407 SITE 2 AC4 6 HOH A 428 HOH A 438 SITE 1 AC5 5 LEU A 37 VAL A 38 HIS A 39 TRP A 48 SITE 2 AC5 5 LEU A 65 CRYST1 66.683 80.133 88.699 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014996 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011274 0.00000