HEADER LIGASE 22-OCT-19 6T7K TITLE CRYSTAL STRUCTURE OF PROLYL-TRNA SYNTHETASE (PRORS, PROLINE--TRNA TITLE 2 LIGASE) FROM PLASMODIUM FALCIPARUM IN COMPLEX WITH NCP-26 AND L- TITLE 3 PROLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROLYL-TRNA SYNTHETASE,PRORS; COMPND 5 EC: 6.1.1.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE 3D7); SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PRORS, PFL0670C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRNA, PROLINE, AMINOACYL-TRNA SYNTHETASE, LIGASE, PROTEIN KEYWDS 2 BIOSYNTHESIS, ATP BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.JOHANSSON,J.WANG,M.TYE,N.C.PAYNE,R.MAZITSCHEK,A.THOMPSON, AUTHOR 2 C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.C.T.OPPERMANN REVDAT 2 24-JAN-24 6T7K 1 REMARK REVDAT 1 18-NOV-20 6T7K 0 JRNL AUTH C.JOHANSSON,J.WANG,M.TYE,N.C.PAYNE,R.MAZITSCHEK,A.THOMPSON, JRNL AUTH 2 C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.C.T.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF PROLYL-TRNA SYNTHETASE (PRORS, JRNL TITL 2 PROLINE--TRNA LIGASE) FROM PLASMODIUM FALCIPARUM IN COMPLEX JRNL TITL 3 WITH NCP-26 AND L-PROLINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 73610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 3612 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.6000 - 5.3011 1.00 2899 140 0.1606 0.1678 REMARK 3 2 5.3011 - 4.2082 1.00 2779 137 0.1336 0.1575 REMARK 3 3 4.2082 - 3.6764 1.00 2722 157 0.1500 0.1688 REMARK 3 4 3.6764 - 3.3404 1.00 2728 129 0.1657 0.1878 REMARK 3 5 3.3404 - 3.1010 1.00 2717 137 0.1899 0.2215 REMARK 3 6 3.1010 - 2.9182 1.00 2704 142 0.1858 0.2040 REMARK 3 7 2.9182 - 2.7720 1.00 2726 117 0.1932 0.2143 REMARK 3 8 2.7720 - 2.6514 1.00 2722 122 0.1833 0.2033 REMARK 3 9 2.6514 - 2.5493 1.00 2657 149 0.1877 0.2042 REMARK 3 10 2.5493 - 2.4613 1.00 2737 108 0.1766 0.2128 REMARK 3 11 2.4613 - 2.3844 1.00 2673 154 0.1838 0.2356 REMARK 3 12 2.3844 - 2.3162 1.00 2681 148 0.1751 0.1853 REMARK 3 13 2.3162 - 2.2552 1.00 2650 154 0.1734 0.2162 REMARK 3 14 2.2552 - 2.2002 1.00 2662 138 0.1715 0.1857 REMARK 3 15 2.2002 - 2.1502 1.00 2662 137 0.1735 0.2076 REMARK 3 16 2.1502 - 2.1044 1.00 2688 124 0.1815 0.2383 REMARK 3 17 2.1044 - 2.0623 1.00 2679 137 0.1759 0.2171 REMARK 3 18 2.0623 - 2.0234 1.00 2675 136 0.1834 0.2062 REMARK 3 19 2.0234 - 1.9873 1.00 2638 175 0.1890 0.2110 REMARK 3 20 1.9873 - 1.9536 1.00 2669 125 0.1942 0.2160 REMARK 3 21 1.9536 - 1.9221 1.00 2672 125 0.2038 0.2046 REMARK 3 22 1.9221 - 1.8925 1.00 2677 146 0.2183 0.2513 REMARK 3 23 1.8925 - 1.8647 1.00 2636 154 0.2298 0.2521 REMARK 3 24 1.8647 - 1.8384 1.00 2625 149 0.2414 0.2750 REMARK 3 25 1.8384 - 1.8136 1.00 2674 152 0.2587 0.3046 REMARK 3 26 1.8136 - 1.7900 0.99 2646 120 0.2687 0.2830 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4239 REMARK 3 ANGLE : 1.184 5714 REMARK 3 CHIRALITY : 0.082 611 REMARK 3 PLANARITY : 0.008 739 REMARK 3 DIHEDRAL : 14.800 2540 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 523 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4454 89.1169 8.0953 REMARK 3 T TENSOR REMARK 3 T11: 0.1792 T22: 0.2299 REMARK 3 T33: 0.1961 T12: -0.0256 REMARK 3 T13: -0.0118 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.9216 L22: 1.5581 REMARK 3 L33: 1.8855 L12: -0.0031 REMARK 3 L13: -0.0369 L23: -0.0795 REMARK 3 S TENSOR REMARK 3 S11: -0.1044 S12: 0.1300 S13: 0.0298 REMARK 3 S21: -0.1522 S22: 0.0575 S23: 0.0324 REMARK 3 S31: 0.0344 S32: 0.0960 S33: 0.0411 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 524 THROUGH 659 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2441 64.5884 15.9693 REMARK 3 T TENSOR REMARK 3 T11: 0.5020 T22: 0.5892 REMARK 3 T33: 0.5372 T12: 0.2026 REMARK 3 T13: 0.0719 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.8216 L22: 1.7710 REMARK 3 L33: 2.3716 L12: -0.6866 REMARK 3 L13: 0.7733 L23: -0.9789 REMARK 3 S TENSOR REMARK 3 S11: -0.1720 S12: -0.3444 S13: -0.3442 REMARK 3 S21: 0.1782 S22: -0.0763 S23: -0.4458 REMARK 3 S31: 0.3312 S32: 0.5858 S33: 0.2282 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 660 THROUGH 746 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1389 77.5190 -14.5687 REMARK 3 T TENSOR REMARK 3 T11: 0.5228 T22: 0.3860 REMARK 3 T33: 0.2838 T12: -0.0097 REMARK 3 T13: -0.0612 T23: -0.0722 REMARK 3 L TENSOR REMARK 3 L11: 4.5599 L22: 2.9147 REMARK 3 L33: 5.3356 L12: -0.5599 REMARK 3 L13: 0.8466 L23: 0.0529 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: 0.4730 S13: -0.1952 REMARK 3 S21: -0.8814 S22: -0.0350 S23: 0.2897 REMARK 3 S31: 0.2683 S32: 0.1952 S33: -0.0399 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 1 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4890 91.8644 5.5268 REMARK 3 T TENSOR REMARK 3 T11: 0.3353 T22: 0.2837 REMARK 3 T33: 0.3881 T12: 0.0384 REMARK 3 T13: -0.0299 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 2.0000 REMARK 3 L33: 2.0000 L12: -6.7677 REMARK 3 L13: 1.9999 L23: -0.6519 REMARK 3 S TENSOR REMARK 3 S11: 3.4260 S12: 0.6781 S13: 0.1062 REMARK 3 S21: -0.7782 S22: -3.7093 S23: -1.2272 REMARK 3 S31: -0.1678 S32: -2.0942 S33: 0.2690 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T7K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104943. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73725 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 89.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.60 REMARK 200 R MERGE FOR SHELL (I) : 1.70300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 4Q15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5 20% PEG 1000, 2 MM REMARK 280 PRO, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.55400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.27700 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.27700 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.55400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 243 REMARK 465 ASP A 244 REMARK 465 ASN A 245 REMARK 465 ALA A 246 REMARK 465 ILE A 247 REMARK 465 ALA A 248 REMARK 465 SER A 249 REMARK 465 THR A 549 REMARK 465 ASN A 699 REMARK 465 GLN A 700 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 307 CD CE NZ REMARK 470 LYS A 329 CE NZ REMARK 470 GLU A 333 CD OE1 OE2 REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 LYS A 370 CE NZ REMARK 470 LYS A 488 CD CE NZ REMARK 470 LYS A 548 C O CB CG CD CE NZ REMARK 470 THR A 550 N CB OG1 CG2 REMARK 470 ASN A 553 CG OD1 ND2 REMARK 470 LYS A 560 NZ REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 LYS A 604 CG CD CE NZ REMARK 470 GLN A 607 CG CD OE1 NE2 REMARK 470 LYS A 625 CD CE NZ REMARK 470 LYS A 642 CD CE NZ REMARK 470 LYS A 650 CD CE NZ REMARK 470 LYS A 671 CE NZ REMARK 470 LYS A 691 CE NZ REMARK 470 ASN A 702 CG OD1 ND2 REMARK 470 LYS A 728 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 359 158.59 178.04 REMARK 500 PHE A 399 -53.87 69.82 REMARK 500 ASP A 551 -83.53 -115.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PRO A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MU5 A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 810 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 812 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 813 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 814 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 815 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 816 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 817 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 818 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 819 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 820 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 821 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 822 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 823 DBREF 6T7K A 249 746 UNP Q8I5R7 SYP_PLAF7 249 746 SEQADV 6T7K SER A 243 UNP Q8I5R7 EXPRESSION TAG SEQADV 6T7K ASP A 244 UNP Q8I5R7 EXPRESSION TAG SEQADV 6T7K ASN A 245 UNP Q8I5R7 EXPRESSION TAG SEQADV 6T7K ALA A 246 UNP Q8I5R7 EXPRESSION TAG SEQADV 6T7K ILE A 247 UNP Q8I5R7 EXPRESSION TAG SEQADV 6T7K ALA A 248 UNP Q8I5R7 EXPRESSION TAG SEQRES 1 A 504 SER ASP ASN ALA ILE ALA SER ASN ILE LEU GLY ILE THR SEQRES 2 A 504 SER LYS LYS ILE GLU ASN PHE SER ASP TRP TYR THR GLN SEQRES 3 A 504 VAL ILE VAL LYS SER GLU LEU ILE GLU TYR TYR ASP ILE SEQRES 4 A 504 SER GLY CYS TYR ILE LEU ARG PRO ALA ALA TYR TYR ILE SEQRES 5 A 504 TRP GLU CYS VAL GLN ALA PHE PHE ASN LYS GLU ILE LYS SEQRES 6 A 504 LYS LEU ASN VAL GLU ASN SER TYR PHE PRO LEU PHE VAL SEQRES 7 A 504 THR LYS ASN LYS LEU GLU LYS GLU LYS ASN HIS ILE GLU SEQRES 8 A 504 GLY PHE SER PRO GLU VAL ALA TRP VAL THR LYS TYR GLY SEQRES 9 A 504 ASP SER ASN LEU PRO GLU GLU ILE ALA ILE ARG PRO THR SEQRES 10 A 504 SER GLU THR ILE MET TYR SER VAL PHE PRO LYS TRP ILE SEQRES 11 A 504 ARG SER TYR ARG ASP LEU PRO LEU LYS LEU ASN GLN TRP SEQRES 12 A 504 ASN THR VAL VAL ARG TRP GLU PHE LYS GLN PRO THR PRO SEQRES 13 A 504 PHE ILE ARG THR ARG GLU PHE LEU TRP GLN GLU GLY HIS SEQRES 14 A 504 THR ALA HIS LYS ASN GLU GLU GLU ALA VAL LYS LEU VAL SEQRES 15 A 504 PHE ASP ILE LEU ASP LEU TYR ARG ARG TRP TYR GLU GLU SEQRES 16 A 504 TYR LEU ALA VAL PRO ILE ILE LYS GLY ILE LYS SER GLU SEQRES 17 A 504 GLY GLU LYS PHE GLY GLY ALA ASN PHE THR SER THR ALA SEQRES 18 A 504 GLU ALA PHE ILE SER GLU ASN GLY ARG ALA ILE GLN ALA SEQRES 19 A 504 ALA THR SER HIS TYR LEU GLY THR ASN PHE ALA LYS MET SEQRES 20 A 504 PHE LYS ILE GLU PHE GLU ASP GLU ASN GLU VAL LYS GLN SEQRES 21 A 504 TYR VAL HIS GLN THR SER TRP GLY CYS THR THR ARG SER SEQRES 22 A 504 ILE GLY ILE MET ILE MET THR HIS GLY ASP ASP LYS GLY SEQRES 23 A 504 LEU VAL LEU PRO PRO ASN VAL SER LYS TYR LYS VAL VAL SEQRES 24 A 504 ILE VAL PRO ILE PHE TYR LYS THR THR ASP GLU ASN ALA SEQRES 25 A 504 ILE HIS SER TYR CYS LYS ASP ILE GLU LYS ILE LEU LYS SEQRES 26 A 504 ASN ALA GLN ILE ASN CYS VAL TYR ASP ASP ARG ALA SER SEQRES 27 A 504 TYR SER PRO GLY TYR LYS PHE ASN HIS TRP GLU LEU ARG SEQRES 28 A 504 GLY ILE PRO ILE ARG ILE GLU VAL GLY PRO LYS ASP LEU SEQRES 29 A 504 GLN ASN ASN SER CYS VAL ILE VAL ARG ARG ASP ASN ASN SEQRES 30 A 504 GLU LYS CYS ASN VAL LYS LYS GLU SER VAL LEU LEU GLU SEQRES 31 A 504 THR GLN GLN MET LEU VAL ASP ILE HIS LYS ASN LEU PHE SEQRES 32 A 504 LEU LYS ALA LYS LYS LYS LEU ASP ASP SER ILE VAL GLN SEQRES 33 A 504 VAL THR SER PHE SER GLU VAL MET ASN ALA LEU ASN LYS SEQRES 34 A 504 LYS LYS MET VAL LEU ALA PRO TRP CYS GLU ASP ILE ALA SEQRES 35 A 504 THR GLU GLU GLU ILE LYS LYS GLU THR GLN ARG LEU SER SEQRES 36 A 504 LEU ASN GLN THR ASN SER GLU THR THR LEU SER GLY ALA SEQRES 37 A 504 MET LYS PRO LEU CYS ILE PRO LEU ASP GLN PRO PRO MET SEQRES 38 A 504 PRO PRO ASN MET LYS CYS PHE TRP SER GLY LYS PRO ALA SEQRES 39 A 504 LYS ARG TRP CYS LEU PHE GLY ARG SER TYR HET PRO A 801 8 HET MU5 A 802 27 HET EDO A 803 4 HET EDO A 804 4 HET EDO A 805 4 HET EDO A 806 4 HET EDO A 807 4 HET EDO A 808 4 HET EDO A 809 4 HET EDO A 810 4 HET EDO A 811 4 HET EDO A 812 4 HET EDO A 813 4 HET EDO A 814 4 HET EDO A 815 4 HET EDO A 816 4 HET EDO A 817 4 HET EDO A 818 4 HET EDO A 819 4 HET EDO A 820 4 HET EDO A 821 4 HET EDO A 822 4 HET EDO A 823 4 HETNAM PRO PROLINE HETNAM MU5 ~{N}-(2,3-DIHYDRO-1~{H}-INDEN-2-YL)-3-(PIPERIDIN-1- HETNAM 2 MU5 YLCARBONYLAMINO)PYRAZINE-2-CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PRO C5 H9 N O2 FORMUL 3 MU5 C20 H23 N5 O2 FORMUL 4 EDO 21(C2 H6 O2) FORMUL 25 HOH *239(H2 O) HELIX 1 AA1 ASN A 261 SER A 273 1 13 HELIX 2 AA2 ARG A 288 LEU A 309 1 22 HELIX 3 AA3 LYS A 322 GLU A 326 1 5 HELIX 4 AA4 GLU A 328 SER A 336 1 9 HELIX 5 AA5 PRO A 337 VAL A 339 5 3 HELIX 6 AA6 SER A 360 SER A 366 1 7 HELIX 7 AA7 VAL A 367 ILE A 372 1 6 HELIX 8 AA8 SER A 374 LEU A 378 5 5 HELIX 9 AA9 ASN A 416 TYR A 438 1 23 HELIX 10 AB1 THR A 484 LYS A 491 1 8 HELIX 11 AB2 THR A 513 GLY A 524 1 12 HELIX 12 AB3 PRO A 532 SER A 536 5 5 HELIX 13 AB4 ASP A 551 ALA A 569 1 19 HELIX 14 AB5 SER A 582 LEU A 592 1 11 HELIX 15 AB6 GLY A 602 ASN A 608 1 7 HELIX 16 AB7 SER A 628 SER A 655 1 28 HELIX 17 AB8 SER A 661 SER A 663 5 3 HELIX 18 AB9 GLU A 664 LYS A 671 1 8 HELIX 19 AC1 ILE A 683 SER A 697 1 15 SHEET 1 AA1 2 ILE A 276 GLU A 277 0 SHEET 2 AA1 2 ILE A 286 LEU A 287 -1 O ILE A 286 N GLU A 277 SHEET 1 AA211 GLU A 312 ASN A 313 0 SHEET 2 AA211 LEU A 380 VAL A 389 1 O ASN A 383 N GLU A 312 SHEET 3 AA211 GLU A 404 HIS A 414 -1 O HIS A 411 N LEU A 382 SHEET 4 AA211 HIS A 505 THR A 512 -1 O TRP A 509 N GLY A 410 SHEET 5 AA211 ARG A 472 GLY A 483 -1 N HIS A 480 O SER A 508 SHEET 6 AA211 PHE A 459 ILE A 467 -1 N ILE A 467 O ARG A 472 SHEET 7 AA211 ILE A 444 ILE A 447 -1 N GLY A 446 O THR A 462 SHEET 8 AA211 LYS A 712 PRO A 717 -1 O ILE A 716 N ILE A 447 SHEET 9 AA211 ARG A 738 GLY A 743 -1 O LEU A 741 N LEU A 714 SHEET 10 AA211 MET A 674 TRP A 679 -1 N VAL A 675 O PHE A 742 SHEET 11 AA211 ILE A 656 GLN A 658 1 N VAL A 657 O MET A 674 SHEET 1 AA3 3 PHE A 319 THR A 321 0 SHEET 2 AA3 3 SER A 348 ILE A 356 -1 O ALA A 355 N VAL A 320 SHEET 3 AA3 3 TRP A 341 TYR A 345 -1 N VAL A 342 O ILE A 354 SHEET 1 AA4 2 GLU A 493 GLU A 495 0 SHEET 2 AA4 2 LYS A 501 TYR A 503 -1 O GLN A 502 N PHE A 494 SHEET 1 AA5 2 LEU A 529 VAL A 530 0 SHEET 2 AA5 2 ARG A 593 GLY A 594 1 O GLY A 594 N LEU A 529 SHEET 1 AA6 5 CYS A 573 TYR A 575 0 SHEET 2 AA6 5 VAL A 540 PRO A 544 1 N ILE A 542 O VAL A 574 SHEET 3 AA6 5 ILE A 597 VAL A 601 1 O ILE A 599 N VAL A 543 SHEET 4 AA6 5 SER A 610 ARG A 615 -1 O VAL A 614 N ARG A 598 SHEET 5 AA6 5 LYS A 621 LYS A 625 -1 O CYS A 622 N ILE A 613 CISPEP 1 LEU A 378 PRO A 379 0 1.47 SITE 1 AC1 12 THR A 359 GLU A 361 ARG A 390 TRP A 407 SITE 2 AC1 12 GLU A 409 PHE A 454 THR A 478 HIS A 480 SITE 3 AC1 12 SER A 508 TRP A 509 GLY A 510 HOH A 959 SITE 1 AC2 18 ARG A 390 GLU A 392 LYS A 394 GLN A 395 SITE 2 AC2 18 PHE A 399 ILE A 400 ARG A 401 THR A 402 SITE 3 AC2 18 PHE A 405 TRP A 407 GLN A 475 THR A 478 SITE 4 AC2 18 GLY A 510 THR A 512 ARG A 514 EDO A 818 SITE 5 AC2 18 HOH A1007 HOH A1027 SITE 1 AC3 2 SER A 263 TYR A 746 SITE 1 AC4 3 TYR A 293 GLU A 296 HOH A1029 SITE 1 AC5 7 LYS A 258 GLU A 469 THR A 522 GLY A 524 SITE 2 AC5 7 LYS A 651 HOH A 911 HOH A 944 SITE 1 AC6 7 SER A 536 LYS A 537 TYR A 538 ILE A 595 SITE 2 AC6 7 HOH A 928 HOH A1032 HOH A1094 SITE 1 AC7 6 GLU A 305 LYS A 308 ARG A 433 EDO A 817 SITE 2 AC7 6 EDO A 822 HOH A 904 SITE 1 AC8 6 ASN A 303 LYS A 307 VAL A 311 GLU A 312 SITE 2 AC8 6 ASN A 313 HOH A 901 SITE 1 AC9 6 LYS A 448 GLU A 452 GLN A 475 THR A 478 SITE 2 AC9 6 HIS A 480 HOH A 959 SITE 1 AD1 4 PRO A 717 GLN A 720 ARG A 738 HOH A1086 SITE 1 AD2 2 ARG A 432 LYS A 445 SITE 1 AD3 6 PRO A 337 TYR A 345 GLY A 346 ASP A 347 SITE 2 AD3 6 SER A 348 HOH A 927 SITE 1 AD4 9 LYS A 527 GLU A 591 ARG A 598 VAL A 614 SITE 2 AD4 9 ARG A 615 ARG A 616 ASN A 619 HOH A 902 SITE 3 AD4 9 HOH A1044 SITE 1 AD5 4 THR A 484 GLN A 502 TYR A 503 HIS A 505 SITE 1 AD6 5 VAL A 421 LYS A 422 PHE A 425 HOH A 905 SITE 2 AD6 5 HOH A 922 SITE 1 AD7 5 LYS A 304 GLU A 305 LYS A 308 ARG A 433 SITE 2 AD7 5 EDO A 807 SITE 1 AD8 3 GLN A 475 ARG A 514 MU5 A 802 SITE 1 AD9 4 ARG A 376 ARG A 578 ALA A 579 SER A 580 SITE 1 AE1 2 VAL A 271 LYS A 272 SITE 1 AE2 3 TYR A 279 ASP A 280 HOH A 963 SITE 1 AE3 9 LEU A 309 ASP A 426 ASP A 429 LEU A 430 SITE 2 AE3 9 EDO A 807 HOH A 904 HOH A 919 HOH A1011 SITE 3 AE3 9 HOH A1050 SITE 1 AE4 5 LEU A 378 PRO A 379 LYS A 415 GLU A 419 SITE 2 AE4 5 HOH A 924 CRYST1 102.999 102.999 126.831 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009709 0.005605 0.000000 0.00000 SCALE2 0.000000 0.011211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007885 0.00000