HEADER OXIDOREDUCTASE 24-OCT-19 6T86 TITLE UROCANATE REDUCTASE IN COMPLEX WITH FAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROCANATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.99.33; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: TRUNCATED URDA, CONSTRUCT COMPRISING RESIDUES 130-582 COMPND 7 AND A C-TERMINAL 6XHIS TAG. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS (STRAIN MR-1); SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: URDA, SO_4620; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UROCANATE REDUCTASE, BACTERIAL ENZYME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.VENSKUTONYTE,K.LINDKVIST-PETERSSON REVDAT 3 24-JAN-24 6T86 1 REMARK REVDAT 2 10-MAR-21 6T86 1 JRNL REVDAT 1 03-MAR-21 6T86 0 JRNL AUTH R.VENSKUTONYTE,A.KOH,O.STENSTROM,M.T.KHAN,A.LUNDQVIST, JRNL AUTH 2 M.AKKE,F.BACKHED,K.LINDKVIST-PETERSSON JRNL TITL STRUCTURAL CHARACTERIZATION OF THE MICROBIAL ENZYME JRNL TITL 2 UROCANATE REDUCTASE MEDIATING IMIDAZOLE PROPIONATE JRNL TITL 3 PRODUCTION. JRNL REF NAT COMMUN V. 12 1347 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33649331 JRNL DOI 10.1038/S41467-021-21548-Y REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2-3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 18292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2196 21.6575 10.1548 REMARK 3 T TENSOR REMARK 3 T11: 0.2387 T22: 0.2227 REMARK 3 T33: 0.1562 T12: 0.0588 REMARK 3 T13: -0.0154 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 5.3902 L22: 3.6506 REMARK 3 L33: 3.2159 L12: 0.9968 REMARK 3 L13: 0.8602 L23: -0.3962 REMARK 3 S TENSOR REMARK 3 S11: -0.0211 S12: 0.4409 S13: 0.2059 REMARK 3 S21: -0.0648 S22: -0.0326 S23: 0.0671 REMARK 3 S31: -0.3746 S32: -0.2552 S33: 0.0589 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.9740 16.0179 17.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.2044 T22: 0.2104 REMARK 3 T33: 0.1735 T12: -0.0060 REMARK 3 T13: 0.0149 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.5461 L22: 1.5093 REMARK 3 L33: 0.6004 L12: -0.1881 REMARK 3 L13: 0.4543 L23: 0.2482 REMARK 3 S TENSOR REMARK 3 S11: 0.0257 S12: 0.1264 S13: 0.0980 REMARK 3 S21: -0.0098 S22: -0.0298 S23: -0.1828 REMARK 3 S31: -0.0749 S32: 0.1344 S33: 0.0021 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 276 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2750 20.4435 14.5334 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.3040 REMARK 3 T33: 0.2450 T12: 0.0057 REMARK 3 T13: -0.0053 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 3.4952 L22: 5.8399 REMARK 3 L33: 4.0305 L12: 1.8302 REMARK 3 L13: 1.3275 L23: 0.6792 REMARK 3 S TENSOR REMARK 3 S11: 0.1256 S12: -0.1707 S13: 0.1278 REMARK 3 S21: 0.0257 S22: -0.2819 S23: 0.4923 REMARK 3 S31: -0.0162 S32: -0.3741 S33: 0.1640 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0669 13.7482 38.1021 REMARK 3 T TENSOR REMARK 3 T11: 0.2583 T22: 0.2656 REMARK 3 T33: 0.3456 T12: 0.0057 REMARK 3 T13: 0.0517 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.0626 L22: 2.1928 REMARK 3 L33: 9.0911 L12: 1.2979 REMARK 3 L13: -0.2340 L23: -2.3590 REMARK 3 S TENSOR REMARK 3 S11: 0.1639 S12: -0.4325 S13: 0.0728 REMARK 3 S21: 0.1566 S22: -0.0495 S23: 0.1248 REMARK 3 S31: 0.3950 S32: -0.0080 S33: -0.1309 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1062 15.3188 34.8660 REMARK 3 T TENSOR REMARK 3 T11: 0.2193 T22: 0.2020 REMARK 3 T33: 0.2184 T12: -0.0048 REMARK 3 T13: 0.0489 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.9227 L22: 0.7585 REMARK 3 L33: 2.3770 L12: -0.3341 REMARK 3 L13: 2.0178 L23: 0.0569 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: -0.0163 S13: -0.1345 REMARK 3 S21: -0.0163 S22: 0.0414 S23: 0.0901 REMARK 3 S31: 0.0464 S32: -0.0339 S33: -0.0415 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.1257 19.1532 46.2596 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.1964 REMARK 3 T33: 0.1500 T12: 0.0372 REMARK 3 T13: -0.0281 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 3.4313 L22: 5.0199 REMARK 3 L33: 2.1006 L12: 1.2494 REMARK 3 L13: -0.8976 L23: -1.0977 REMARK 3 S TENSOR REMARK 3 S11: 0.0295 S12: 0.0849 S13: -0.1589 REMARK 3 S21: 0.0032 S22: -0.0327 S23: 0.1242 REMARK 3 S31: -0.0431 S32: -0.0039 S33: -0.0198 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 454 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.7576 20.1538 57.3766 REMARK 3 T TENSOR REMARK 3 T11: 0.2360 T22: 0.2528 REMARK 3 T33: 0.1827 T12: -0.0257 REMARK 3 T13: -0.0159 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 5.9929 L22: 4.3828 REMARK 3 L33: 1.8335 L12: -2.5521 REMARK 3 L13: -0.3148 L23: -0.9819 REMARK 3 S TENSOR REMARK 3 S11: -0.2491 S12: -0.6586 S13: -0.0996 REMARK 3 S21: 0.5174 S22: 0.2380 S23: -0.0140 REMARK 3 S31: -0.0917 S32: 0.0741 S33: 0.0113 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 491 THROUGH 542 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.7798 10.5269 35.5552 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.1481 REMARK 3 T33: 0.2796 T12: -0.0040 REMARK 3 T13: 0.0154 T23: 0.0466 REMARK 3 L TENSOR REMARK 3 L11: 2.3150 L22: 0.1936 REMARK 3 L33: 3.1108 L12: 0.4339 REMARK 3 L13: 1.8990 L23: 0.7520 REMARK 3 S TENSOR REMARK 3 S11: 0.0949 S12: 0.0018 S13: -0.2304 REMARK 3 S21: 0.0161 S22: 0.0034 S23: -0.0656 REMARK 3 S31: 0.1307 S32: 0.0523 S33: -0.1059 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 543 THROUGH 582 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.8679 10.4359 18.3099 REMARK 3 T TENSOR REMARK 3 T11: 0.2760 T22: 0.1459 REMARK 3 T33: 0.2476 T12: -0.0234 REMARK 3 T13: 0.0021 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 2.6843 L22: 1.4694 REMARK 3 L33: 0.3594 L12: -0.4930 REMARK 3 L13: -0.0863 L23: -0.6854 REMARK 3 S TENSOR REMARK 3 S11: -0.0336 S12: 0.0501 S13: -0.1179 REMARK 3 S21: -0.1163 S22: 0.0266 S23: -0.0374 REMARK 3 S31: 0.2567 S32: -0.0729 S33: -0.0034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T86 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292105013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18422 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 46.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 18.80 REMARK 200 R MERGE (I) : 0.17500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1D4C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5 2 M (NH4)2SO4 5% REMARK 280 XYLITOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -520.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 159.78600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 75.49100 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 159.78600 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 75.49100 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -276.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 75.49100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 583 REMARK 465 HIS A 584 REMARK 465 HIS A 585 REMARK 465 HIS A 586 REMARK 465 HIS A 587 REMARK 465 HIS A 588 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 252 -0.12 -143.49 REMARK 500 ASN A 334 97.99 -164.60 REMARK 500 LEU A 337 47.65 -90.42 REMARK 500 ASP A 338 -140.41 -91.58 REMARK 500 HIS A 361 38.25 75.56 REMARK 500 PHE A 404 -3.70 -141.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 614 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 522 O REMARK 620 2 MET A 523 O 95.8 REMARK 620 3 GLY A 524 O 82.6 78.3 REMARK 620 4 GLU A 550 O 96.7 163.8 93.1 REMARK 620 5 THR A 552 O 164.8 83.1 82.3 82.2 REMARK 620 6 HOH A 813 O 100.4 91.3 169.4 96.6 94.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 614 DBREF 6T86 A 130 582 UNP Q8CVD0 URDA_SHEON 130 582 SEQADV 6T86 MET A 129 UNP Q8CVD0 INITIATING METHIONINE SEQADV 6T86 HIS A 583 UNP Q8CVD0 EXPRESSION TAG SEQADV 6T86 HIS A 584 UNP Q8CVD0 EXPRESSION TAG SEQADV 6T86 HIS A 585 UNP Q8CVD0 EXPRESSION TAG SEQADV 6T86 HIS A 586 UNP Q8CVD0 EXPRESSION TAG SEQADV 6T86 HIS A 587 UNP Q8CVD0 EXPRESSION TAG SEQADV 6T86 HIS A 588 UNP Q8CVD0 EXPRESSION TAG SEQRES 1 A 460 MET GLU TYR THR TYR ASP VAL VAL ILE ILE GLY SER GLY SEQRES 2 A 460 GLY ALA GLY PHE SER ALA GLY LEU GLU ALA ILE ALA ALA SEQRES 3 A 460 GLY ARG SER ALA VAL ILE ILE GLU LYS MET PRO ILE ILE SEQRES 4 A 460 GLY GLY ASN SER LEU ILE SER GLY ALA GLU MET ASN VAL SEQRES 5 A 460 ALA GLY SER TRP VAL GLN LYS ASN MET GLY ILE THR ASP SEQRES 6 A 460 SER LYS GLU LEU PHE ILE SER ASP THR LEU LYS GLY GLY SEQRES 7 A 460 ASP PHE LYS GLY ASP PRO GLU MET VAL LYS THR MET VAL SEQRES 8 A 460 ASP ASN ALA VAL GLY ALA ALA GLU TRP LEU ARG ASP TYR SEQRES 9 A 460 VAL LYS VAL GLU PHE TYR PRO ASP GLN LEU PHE GLN PHE SEQRES 10 A 460 GLY GLY HIS SER VAL LYS ARG ALA LEU ILE PRO LYS GLY SEQRES 11 A 460 HIS THR GLY ALA GLU VAL ILE SER LYS PHE SER ILE LYS SEQRES 12 A 460 ALA ASP GLU VAL GLY LEU PRO ILE HIS THR ASN THR LYS SEQRES 13 A 460 ALA GLU LYS LEU ILE GLN ASP GLN THR GLY ARG ILE VAL SEQRES 14 A 460 GLY VAL GLU ALA ALA HIS ASN GLY LYS THR ILE THR TYR SEQRES 15 A 460 HIS ALA LYS ARG GLY VAL VAL ILE ALA THR GLY GLY PHE SEQRES 16 A 460 SER SER ASN MET GLU MET ARG LYS LYS TYR ASN PRO GLU SEQRES 17 A 460 LEU ASP GLU ARG TYR GLY SER THR GLY HIS ALA GLY GLY SEQRES 18 A 460 THR GLY ASP GLY ILE VAL MET ALA GLU LYS ILE HIS ALA SEQRES 19 A 460 ALA ALA LYS ASN MET GLY TYR ILE GLN SER TYR PRO ILE SEQRES 20 A 460 CYS SER PRO THR SER GLY ALA ILE ALA LEU ILE ALA ASP SEQRES 21 A 460 SER ARG PHE PHE GLY ALA VAL LEU ILE ASN GLN LYS GLY SEQRES 22 A 460 GLU ARG PHE VAL GLU GLU LEU GLU ARG ARG ASP VAL ILE SEQRES 23 A 460 SER HIS ALA ILE LEU ALA GLN PRO GLY ARG TYR THR TYR SEQRES 24 A 460 VAL LEU TRP ASN GLN ASP ILE GLU ASN VAL ALA HIS THR SEQRES 25 A 460 VAL GLU MET HIS GLN GLY GLU LEU LYS GLU PHE THR LYS SEQRES 26 A 460 ASP GLY LEU MET TYR LYS VAL ASP THR LEU GLU GLU ALA SEQRES 27 A 460 ALA LYS VAL PHE ASN ILE PRO GLU ASP LYS LEU LEU SER SEQRES 28 A 460 THR ILE LYS ASP VAL ASN HIS TYR ALA ALA THR GLY LYS SEQRES 29 A 460 ASP GLU ALA PHE ASN HIS ARG SER GLY LEU VAL ASP LEU SEQRES 30 A 460 SER LYS GLY PRO TYR TRP ILE LEU LYS ALA THR PRO SER SEQRES 31 A 460 VAL HIS HIS THR MET GLY GLY LEU VAL VAL ASP THR ARG SEQRES 32 A 460 THR ARG VAL LEU ASP GLU GLN GLY LYS VAL ILE PRO GLY SEQRES 33 A 460 LEU PHE ALA ALA GLY GLU VAL THR GLY LEU THR HIS GLY SEQRES 34 A 460 THR ASN ARG LEU GLY GLY ASN ALA TYR THR ASP ILE ILE SEQRES 35 A 460 VAL TYR GLY ARG ILE ALA GLY GLN GLU ALA ALA LYS HIS SEQRES 36 A 460 HIS HIS HIS HIS HIS HET FAD A 601 53 HET GOL A 602 6 HET GOL A 603 6 HET GOL A 604 6 HET CL A 605 1 HET CL A 606 1 HET CL A 607 1 HET SO4 A 608 5 HET SO4 A 609 5 HET SO4 A 610 5 HET SO4 A 611 5 HET SO4 A 612 5 HET SO4 A 613 5 HET NA A 614 1 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 CL 3(CL 1-) FORMUL 9 SO4 6(O4 S 2-) FORMUL 15 NA NA 1+ FORMUL 16 HOH *190(H2 O) HELIX 1 AA1 GLY A 141 ALA A 154 1 14 HELIX 2 AA2 GLY A 168 SER A 174 1 7 HELIX 3 AA3 SER A 183 GLY A 190 1 8 HELIX 4 AA4 SER A 194 GLY A 206 1 13 HELIX 5 AA5 ASP A 211 ASN A 221 1 11 HELIX 6 AA6 ASN A 221 TYR A 232 1 12 HELIX 7 AA7 GLY A 261 GLY A 276 1 16 HELIX 8 AA8 ASN A 326 ASN A 334 1 9 HELIX 9 AA9 GLY A 351 ILE A 360 1 10 HELIX 10 AB1 ALA A 384 GLY A 393 5 10 HELIX 11 AB2 ARG A 410 ALA A 420 1 11 HELIX 12 AB3 GLN A 421 TYR A 425 5 5 HELIX 13 AB4 GLN A 432 HIS A 439 1 8 HELIX 14 AB5 HIS A 439 HIS A 444 1 6 HELIX 15 AB6 HIS A 444 ASP A 454 1 11 HELIX 16 AB7 THR A 462 PHE A 470 1 9 HELIX 17 AB8 PRO A 473 GLY A 491 1 19 HELIX 18 AB9 GLY A 563 ALA A 581 1 19 SHEET 1 AA1 6 ILE A 279 HIS A 280 0 SHEET 2 AA1 6 ALA A 158 ILE A 161 1 N ILE A 160 O HIS A 280 SHEET 3 AA1 6 GLU A 130 ILE A 138 1 N ILE A 137 O VAL A 159 SHEET 4 AA1 6 LYS A 306 ILE A 318 1 O HIS A 311 N TYR A 131 SHEET 5 AA1 6 ILE A 296 HIS A 303 -1 N VAL A 299 O TYR A 310 SHEET 6 AA1 6 LYS A 284 GLN A 290 -1 N ILE A 289 O GLY A 298 SHEET 1 AA2 6 ILE A 279 HIS A 280 0 SHEET 2 AA2 6 ALA A 158 ILE A 161 1 N ILE A 160 O HIS A 280 SHEET 3 AA2 6 GLU A 130 ILE A 138 1 N ILE A 137 O VAL A 159 SHEET 4 AA2 6 LYS A 306 ILE A 318 1 O HIS A 311 N TYR A 131 SHEET 5 AA2 6 VAL A 541 ALA A 547 1 O GLY A 544 N VAL A 316 SHEET 6 AA2 6 ARG A 533 LEU A 535 -1 N VAL A 534 O ILE A 542 SHEET 1 AA3 3 MET A 178 ASN A 179 0 SHEET 2 AA3 3 ALA A 253 PRO A 256 -1 O LEU A 254 N MET A 178 SHEET 3 AA3 3 PHE A 237 PHE A 243 -1 N TYR A 238 O ILE A 255 SHEET 1 AA4 4 GLY A 342 SER A 343 0 SHEET 2 AA4 4 TYR A 510 THR A 522 1 O VAL A 519 N GLY A 342 SHEET 3 AA4 4 THR A 426 ASN A 431 -1 N VAL A 428 O LEU A 513 SHEET 4 AA4 4 VAL A 395 ILE A 397 -1 N ILE A 397 O TYR A 427 SHEET 1 AA5 3 ILE A 370 CYS A 376 0 SHEET 2 AA5 3 TYR A 510 THR A 522 -1 O HIS A 521 N GLN A 371 SHEET 3 AA5 3 MET A 457 VAL A 460 -1 N VAL A 460 O TYR A 510 SHEET 1 AA6 2 ALA A 364 LYS A 365 0 SHEET 2 AA6 2 GLY A 525 LEU A 526 -1 O GLY A 525 N LYS A 365 LINK O THR A 522 NA NA A 614 1555 1555 2.38 LINK O MET A 523 NA NA A 614 1555 1555 2.66 LINK O GLY A 524 NA NA A 614 1555 1555 2.50 LINK O GLU A 550 NA NA A 614 1555 1555 2.54 LINK O THR A 552 NA NA A 614 1555 1555 2.39 LINK NA NA A 614 O HOH A 813 1555 1555 2.39 CISPEP 1 GLY A 508 PRO A 509 0 0.31 SITE 1 AC1 41 ILE A 138 GLY A 139 GLY A 141 GLY A 142 SITE 2 AC1 41 ALA A 143 GLU A 162 LYS A 163 MET A 164 SITE 3 AC1 41 GLY A 168 GLY A 169 ASN A 170 SER A 171 SITE 4 AC1 41 SER A 174 GLY A 175 GLU A 177 THR A 283 SITE 5 AC1 41 ALA A 285 ALA A 319 THR A 320 GLY A 321 SITE 6 AC1 41 THR A 344 HIS A 346 ASP A 352 HIS A 520 SITE 7 AC1 41 HIS A 521 GLY A 549 GLU A 550 ARG A 560 SITE 8 AC1 41 GLY A 563 ASN A 564 ALA A 565 TYR A 566 SITE 9 AC1 41 ILE A 569 SO4 A 608 HOH A 712 HOH A 715 SITE 10 AC1 41 HOH A 725 HOH A 726 HOH A 750 HOH A 770 SITE 11 AC1 41 HOH A 778 SITE 1 AC2 3 TYR A 133 PRO A 278 HIS A 280 SITE 1 AC3 3 HIS A 280 THR A 281 SO4 A 611 SITE 1 AC4 1 SO4 A 608 SITE 1 AC5 2 ARG A 314 HOH A 767 SITE 1 AC6 3 LYS A 365 ASN A 366 HOH A 837 SITE 1 AC7 3 GLU A 150 TRP A 228 HOH A 776 SITE 1 AC8 10 PHE A 245 ARG A 411 HIS A 520 ARG A 560 SITE 2 AC8 10 GLY A 562 GLY A 563 FAD A 601 GOL A 604 SITE 3 AC8 10 HOH A 715 HOH A 733 SITE 1 AC9 7 ARG A 410 ARG A 411 ASN A 559 HOH A 754 SITE 2 AC9 7 HOH A 791 HOH A 800 HOH A 838 SITE 1 AD1 7 HIS A 444 GLN A 445 GLY A 446 GLU A 447 SITE 2 AD1 7 LYS A 449 HOH A 758 HOH A 840 SITE 1 AD2 4 ASN A 282 HIS A 303 GLY A 423 GOL A 603 SITE 1 AD3 1 ARG A 531 SITE 1 AD4 4 SER A 194 LYS A 195 GLU A 196 HOH A 701 SITE 1 AD5 6 THR A 522 MET A 523 GLY A 524 GLU A 550 SITE 2 AD5 6 THR A 552 HOH A 813 CRYST1 159.786 159.786 75.491 90.00 90.00 120.00 P 6 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006258 0.003613 0.000000 0.00000 SCALE2 0.000000 0.007227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013247 0.00000