HEADER OXIDOREDUCTASE 01-NOV-19 6TB6 TITLE CRYSTAL STRUCTURE OF FORMATE DEHYDROGENASE FDH2 D222S/Q223R ENZYME TITLE 2 FROM GRANULICELLA MALLENSIS MP5ACTX8 IN COMPLEX WITH NADP AND AZIDE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMATE DEHYDROGENASE; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: FDH,NAD-DEPENDENT FORMATE DEHYDROGENASE; COMPND 5 EC: 1.17.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GRANULICELLA MALLENSIS; SOURCE 3 ORGANISM_TAXID: 940614; SOURCE 4 GENE: ACIX8_0868; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FORMATE DEHYDROGENASE, NAD, NADP, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.S.ROBESCU,R.RUBINI,F.FILIPPINI,B.BERGANTINO,L.CENDRON REVDAT 2 24-JAN-24 6TB6 1 REMARK REVDAT 1 05-AUG-20 6TB6 0 JRNL AUTH M.S.ROBESCU,R.RUBINI,E.BENEVENTI,M.TAVANTI,C.LONIGRO,F.ZITO, JRNL AUTH 2 F.FILIPPINI,L.CENDRON,E.BERGANTINO JRNL TITL FROM THE AMELIORATION OF A NADP+-DEPENDENT FORMATE JRNL TITL 2 DEHYDROGENASE TO THE DISCOVERY OF A NEW ENZYME: ROUND TRIP JRNL TITL 3 FROM THEORY TO PRACTICE JRNL REF CHEMCATCHEM 2020 JRNL REFN ESSN 1867-3899 JRNL DOI 10.1002/CCTC.201902089 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 52681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.0181 - 1.9800 1.00 2822 138 0.2447 0.2875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105094. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 207048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 45.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.46 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6T8C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.005 M COBALT(II) CHLORIDE REMARK 280 HEXAHYDRATE, 0.005 M CADMIUM CHLORIDE HEMI(PENTAHYDRATE), 0.005 REMARK 280 M MAGNESIUM CHLORIDE HEXAHYDRATE, 0.005 M NICKEL(II) CHLORIDE REMARK 280 HEXAHYDRATE, 0.1 M HEPES PH 7.5, 12 % W/V PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.39150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.84100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.39150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.84100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1163 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLY B 376 REMARK 465 THR B 377 REMARK 465 GLY B 378 REMARK 465 ALA B 379 REMARK 465 HIS B 380 REMARK 465 SER B 381 REMARK 465 TYR B 382 REMARK 465 THR B 383 REMARK 465 VAL B 384 REMARK 465 SER B 385 REMARK 465 LYS B 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 802 O HOH B 816 1.67 REMARK 500 UNK UNX B 705 UNK UNX B 706 1.71 REMARK 500 UNK UNX B 707 UNK UNX B 709 1.95 REMARK 500 UNK UNX B 705 O HOH B 1094 1.96 REMARK 500 UNK UNX B 705 UNK UNX B 709 1.98 REMARK 500 O HOH B 802 O HOH B 1138 2.04 REMARK 500 OE2 GLU B 228 O HOH B 801 2.12 REMARK 500 NZ LYS B 3 OE1 GLU B 87 2.17 REMARK 500 O HOH B 868 O HOH B 977 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 44 43.15 -107.94 REMARK 500 TRP B 100 73.49 -151.91 REMARK 500 LEU B 104 79.06 -104.72 REMARK 500 TYR B 145 -6.06 75.65 REMARK 500 ALA B 199 141.18 91.06 REMARK 500 ALA B 284 -68.75 -102.23 REMARK 500 ARG B 285 118.95 -166.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 703 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 224 NE2 REMARK 620 2 HOH B 858 O 85.8 REMARK 620 3 HOH B1094 O 98.2 78.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 704 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 259 NE2 REMARK 620 2 GLU B 359 OE1 105.7 REMARK 620 3 GLU B 359 OE2 106.4 3.3 REMARK 620 4 HOH B 914 O 95.1 13.4 16.1 REMARK 620 5 HOH B 964 O 165.8 88.0 87.0 98.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZI B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 704 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6T8C RELATED DB: PDB REMARK 900 RELATED ID: 6T8J RELATED DB: PDB REMARK 900 RELATED ID: 6T9W RELATED DB: PDB REMARK 900 RELATED ID: 6T9X RELATED DB: PDB DBREF 6TB6 B 1 386 UNP G8NTI5 G8NTI5_GRAMM 1 386 SEQADV 6TB6 SER B 222 UNP G8NTI5 ASP 222 CONFLICT SEQADV 6TB6 ARG B 223 UNP G8NTI5 GLN 223 CONFLICT SEQRES 1 B 386 MET ALA LYS ILE LEU CYS VAL LEU TYR ASP ASP PRO ILE SEQRES 2 B 386 THR GLY TYR PRO LYS SER TYR ALA ARG ALA ASP VAL PRO SEQRES 3 B 386 LYS ILE ASP HIS TYR PRO GLY GLY GLN THR ALA PRO THR SEQRES 4 B 386 PRO LYS GLN ILE ASP PHE THR PRO GLY GLU LEU LEU GLY SEQRES 5 B 386 SER VAL SER GLY GLU LEU GLY LEU ARG LYS TYR LEU GLU SEQRES 6 B 386 GLY LEU GLY HIS THR LEU VAL VAL THR SER ASP LYS GLU SEQRES 7 B 386 GLY GLU ASP SER VAL PHE GLU ARG GLU LEU PRO ASP ALA SEQRES 8 B 386 GLU ILE VAL ILE SER GLN PRO PHE TRP PRO ALA TYR LEU SEQRES 9 B 386 THR PRO GLU ARG ILE ALA LYS ALA LYS LYS LEU LYS LEU SEQRES 10 B 386 ALA VAL THR ALA GLY ILE GLY SER ASP HIS VAL ASP LEU SEQRES 11 B 386 GLU ALA ALA ILE LYS ASN GLY ILE THR VAL ALA GLU VAL SEQRES 12 B 386 THR TYR SER ASN SER ILE SER VAL SER GLU HIS VAL VAL SEQRES 13 B 386 MET MET ILE LEU SER LEU VAL ARG ASN TYR ILE PRO SER SEQRES 14 B 386 TYR GLN TRP VAL ILE LYS GLY GLY TRP ASN ILE ALA ASP SEQRES 15 B 386 CYS VAL GLU ARG SER TYR ASP LEU GLU ALA MET HIS VAL SEQRES 16 B 386 GLY THR VAL ALA ALA GLY ARG ILE GLY LEU ALA VAL LEU SEQRES 17 B 386 LYS ARG LEU LYS PRO PHE ASP VAL LYS LEU HIS TYR PHE SEQRES 18 B 386 SER ARG HIS ARG LEU PRO GLU SER VAL GLU ASN GLU LEU SEQRES 19 B 386 GLY LEU THR TYR HIS PRO SER VAL GLU ASP MET VAL LYS SEQRES 20 B 386 VAL CYS ASP VAL VAL THR ILE ASN ALA PRO LEU HIS PRO SEQRES 21 B 386 GLY THR LEU ASP LEU PHE ASN ASP GLU LEU ILE SER LYS SEQRES 22 B 386 MET LYS ARG GLY ALA TYR LEU VAL ASN THR ALA ARG GLY SEQRES 23 B 386 LYS ILE CYS ASN ARG ASP ALA VAL VAL ARG ALA LEU GLU SEQRES 24 B 386 SER GLY GLN LEU ALA GLY TYR ALA GLY ASP VAL TRP PHE SEQRES 25 B 386 PRO GLN PRO ALA PRO LYS ASP HIS PRO TRP ARG THR MET SEQRES 26 B 386 PRO HIS HIS GLY MET THR PRO HIS ILE SER GLY THR SER SEQRES 27 B 386 LEU SER ALA GLN ALA ARG TYR ALA ALA GLY THR ARG GLU SEQRES 28 B 386 ILE LEU GLU CYS TRP PHE GLU GLU ARG PRO ILE ARG GLU SEQRES 29 B 386 GLU TYR LEU ILE VAL ASP GLY GLY LYS LEU ALA GLY THR SEQRES 30 B 386 GLY ALA HIS SER TYR THR VAL SER LYS HET AZI B 701 3 HET NAP B 702 48 HET CO B 703 1 HET CO B 704 1 HET UNX B 705 1 HET UNX B 706 1 HET UNX B 707 1 HET UNX B 708 1 HET UNX B 709 1 HETNAM AZI AZIDE ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM CO COBALT (II) ION HETNAM UNX UNKNOWN ATOM OR ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 AZI N3 1- FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 CO 2(CO 2+) FORMUL 6 UNX 5(X) FORMUL 11 HOH *377(H2 O) HELIX 1 AA1 GLY B 56 GLY B 59 5 4 HELIX 2 AA2 LEU B 60 LEU B 67 1 8 HELIX 3 AA3 SER B 82 LEU B 88 1 7 HELIX 4 AA4 PRO B 89 ALA B 91 5 3 HELIX 5 AA5 THR B 105 ALA B 112 1 8 HELIX 6 AA6 ASP B 129 ASN B 136 1 8 HELIX 7 AA7 ASN B 147 ASN B 165 1 19 HELIX 8 AA8 ASN B 165 LYS B 175 1 11 HELIX 9 AA9 ASN B 179 GLU B 185 1 7 HELIX 10 AB1 GLY B 201 LYS B 212 1 12 HELIX 11 AB2 PRO B 213 ASP B 215 5 3 HELIX 12 AB3 PRO B 227 GLY B 235 1 9 HELIX 13 AB4 SER B 241 LYS B 247 1 7 HELIX 14 AB5 ASN B 267 LYS B 273 1 7 HELIX 15 AB6 ARG B 285 CYS B 289 5 5 HELIX 16 AB7 ASN B 290 SER B 300 1 11 HELIX 17 AB8 HIS B 320 THR B 324 5 5 HELIX 18 AB9 ILE B 334 THR B 337 5 4 HELIX 19 AC1 SER B 338 GLU B 358 1 21 HELIX 20 AC2 ARG B 363 GLU B 365 5 3 SHEET 1 AA1 7 THR B 70 THR B 74 0 SHEET 2 AA1 7 LYS B 3 VAL B 7 1 N ILE B 4 O THR B 70 SHEET 3 AA1 7 ILE B 93 SER B 96 1 O ILE B 93 N LEU B 5 SHEET 4 AA1 7 LEU B 117 THR B 120 1 O VAL B 119 N VAL B 94 SHEET 5 AA1 7 THR B 139 GLU B 142 1 O ALA B 141 N THR B 120 SHEET 6 AA1 7 LEU B 367 ASP B 370 -1 O ILE B 368 N VAL B 140 SHEET 7 AA1 7 LYS B 373 LEU B 374 -1 O LYS B 373 N ASP B 370 SHEET 1 AA2 6 LEU B 236 HIS B 239 0 SHEET 2 AA2 6 LYS B 217 PHE B 221 1 N TYR B 220 O HIS B 239 SHEET 3 AA2 6 HIS B 194 VAL B 198 1 N VAL B 195 O HIS B 219 SHEET 4 AA2 6 VAL B 251 ILE B 254 1 O THR B 253 N VAL B 198 SHEET 5 AA2 6 ALA B 278 ASN B 282 1 O VAL B 281 N VAL B 252 SHEET 6 AA2 6 LEU B 303 GLY B 308 1 O ALA B 304 N ALA B 278 LINK NE2 HIS B 224 CO CO B 703 1555 1555 2.07 LINK NE2AHIS B 259 CO CO B 704 1555 1555 2.51 LINK OE1 GLU B 359 CO CO B 704 1555 3645 2.62 LINK OE2 GLU B 359 CO CO B 704 1555 3645 2.45 LINK CO CO B 703 O HOH B 858 1555 3655 2.43 LINK CO CO B 703 O HOH B1094 1555 1555 2.23 LINK CO CO B 704 O HOH B 914 1555 3655 2.07 LINK CO CO B 704 O HOH B 964 1555 1555 2.24 CISPEP 1 PHE B 312 PRO B 313 0 -6.41 CISPEP 2 GLN B 314 PRO B 315 0 2.04 SITE 1 AC1 7 PRO B 98 PHE B 99 GLY B 122 ILE B 123 SITE 2 AC1 7 ASN B 147 HIS B 333 NAP B 702 SITE 1 AC2 31 PHE B 99 ILE B 123 ASN B 147 SER B 148 SITE 2 AC2 31 VAL B 151 ALA B 199 GLY B 201 ARG B 202 SITE 3 AC2 31 ILE B 203 PHE B 221 HIS B 224 ASN B 255 SITE 4 AC2 31 PRO B 257 HIS B 259 THR B 262 THR B 283 SITE 5 AC2 31 ALA B 284 ARG B 285 ASP B 309 HIS B 333 SITE 6 AC2 31 SER B 335 GLY B 336 AZI B 701 HOH B 817 SITE 7 AC2 31 HOH B 922 HOH B 923 HOH B 925 HOH B 964 SITE 8 AC2 31 HOH B 979 HOH B1019 HOH B1041 SITE 1 AC3 3 HIS B 224 HOH B 858 HOH B1094 SITE 1 AC4 4 HIS B 259 GLU B 359 HOH B 914 HOH B 964 CRYST1 48.903 60.783 131.682 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020449 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016452 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007594 0.00000