HEADER TRANSCRIPTION 04-NOV-19 6TBZ TITLE CRYSTAL STRUCTURE OF THE MH1 DOMAIN OF SMAD5-SMAD3 CHIMERA CONSTRUCT TITLE 2 BOUND TO THE GGCGC SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MOTHERS AGAINST DPP HOMOLOG 5,JV5-1,SMAD FAMILY MEMBER 5, COMPND 5 HSMAD5; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'); COMPND 10 CHAIN: B, C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMAD5, MADH5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS TGF-B, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR R.PLUTA,M.J.MACIAS REVDAT 5 24-JAN-24 6TBZ 1 JRNL REMARK REVDAT 4 10-FEB-21 6TBZ 1 JRNL REMARK REVDAT 3 29-APR-20 6TBZ 1 AUTHOR REVDAT 2 11-DEC-19 6TBZ 1 COMPND SOURCE DBREF SEQADV REVDAT 1 20-NOV-19 6TBZ 0 JRNL AUTH L.RUIZ,Z.KACZMARSKA,T.GOMES,E.ARAGON,C.TORNER,R.FREIER, JRNL AUTH 2 B.BAGINSKI,P.MARTIN-MALPARTIDA,N.DE MARTIN GARRIDO, JRNL AUTH 3 J.A.MARQUEZ,T.N.CORDEIRO,R.PLUTA,M.J.MACIAS JRNL TITL UNVEILING THE DIMER/MONOMER PROPENSITIES OF SMAD MH1-DNA JRNL TITL 2 COMPLEXES. JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 632 2021 JRNL REFN ESSN 2001-0370 JRNL PMID 33510867 JRNL DOI 10.1016/J.CSBJ.2020.12.044 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (3-OCT-2019) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 45.4 REMARK 3 NUMBER OF REFLECTIONS : 11400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 550 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.06 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2118 REMARK 3 BIN FREE R VALUE : 0.3566 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 22 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1027 REMARK 3 NUCLEIC ACID ATOMS : 656 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.11100 REMARK 3 B22 (A**2) : 4.11100 REMARK 3 B33 (A**2) : -8.22200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.320 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.286 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.287 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.206 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1850 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2643 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 576 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 222 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1850 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 228 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1033 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.02 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 25.40 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 7.2678 4.1953 6.4289 REMARK 3 T TENSOR REMARK 3 T11: -0.0603 T22: 0.056 REMARK 3 T33: -0.2371 T12: 0.0066 REMARK 3 T13: 0.0157 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 4.7332 L22: 3.6407 REMARK 3 L33: 6.4968 L12: -0.0648 REMARK 3 L13: -0.3336 L23: -0.6534 REMARK 3 S TENSOR REMARK 3 S11: 0.1093 S12: 0.1465 S13: 0.183 REMARK 3 S21: 0.1465 S22: -0.0619 S23: 0.3358 REMARK 3 S31: 0.183 S32: 0.3358 S33: -0.0474 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 11.6506 26.1093 2.058 REMARK 3 T TENSOR REMARK 3 T11: -0.3445 T22: -0.0529 REMARK 3 T33: 0.1053 T12: -0.0374 REMARK 3 T13: 0.0855 T23: 0.1559 REMARK 3 L TENSOR REMARK 3 L11: 5.3315 L22: 10.101 REMARK 3 L33: 5.9868 L12: 1.6903 REMARK 3 L13: 1.7859 L23: 0.3939 REMARK 3 S TENSOR REMARK 3 S11: -0.1513 S12: -0.1752 S13: -0.1407 REMARK 3 S21: -0.1752 S22: 0.3309 S23: -0.0015 REMARK 3 S31: -0.1407 S32: -0.0015 S33: -0.1797 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 10.9144 23.991 2.0378 REMARK 3 T TENSOR REMARK 3 T11: -0.3933 T22: -0.0715 REMARK 3 T33: 0.304 T12: 0.0253 REMARK 3 T13: 0.1041 T23: 0.1237 REMARK 3 L TENSOR REMARK 3 L11: 4.4573 L22: 6.8208 REMARK 3 L33: 5.224 L12: 3.7727 REMARK 3 L13: 2.4998 L23: -0.3379 REMARK 3 S TENSOR REMARK 3 S11: -0.1797 S12: 0.0628 S13: -0.0423 REMARK 3 S21: 0.0628 S22: 0.3275 S23: 0.0186 REMARK 3 S31: -0.0423 S32: 0.0186 S33: -0.1478 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11400 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6FZS REMARK 200 REMARK 200 REMARK: ELONGATED CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.05 M SODIUM CITRATE PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.43600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.71800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 8 REMARK 465 LEU A 136 REMARK 465 PRO A 137 REMARK 465 PRO A 138 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 13 CG CD CE NZ REMARK 480 LYS A 19 CE NZ REMARK 480 GLU A 22 CG CD OE1 OE2 REMARK 480 GLN A 23 CB CG CD OE1 NE2 REMARK 480 GLN A 26 CG CD OE1 NE2 REMARK 480 GLU A 28 CG CD OE1 OE2 REMARK 480 LYS A 29 CG CD CE NZ REMARK 480 LYS A 43 CE NZ REMARK 480 LYS A 44 CG CD CE NZ REMARK 480 GLU A 132 CD OE1 OE2 REMARK 480 VAL A 135 CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 10 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC B 11 O4' - C4' - C3' ANGL. DEV. = -2.6 DEGREES REMARK 500 DC B 11 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC C 3 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG C 5 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG C 10 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 94 -64.84 -132.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 65 SG REMARK 620 2 CYS A 110 SG 106.5 REMARK 620 3 CYS A 122 SG 107.8 118.1 REMARK 620 4 HIS A 127 ND1 104.2 108.8 110.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6FZS RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: 6FZT RELATED DB: PDB REMARK 900 RELATED STRUCTURE DBREF 6TBZ A 8 138 UNP Q99717 SMAD5_HUMAN 11 138 DBREF 6TBZ B 1 16 PDB 6TBZ 6TBZ 1 16 DBREF 6TBZ C 1 16 PDB 6TBZ 6TBZ 1 16 SEQADV 6TBZ GLU A 22 UNP Q99717 INSERTION SEQADV 6TBZ GLN A 23 UNP Q99717 INSERTION SEQADV 6TBZ ASN A 24 UNP Q99717 INSERTION SEQADV 6TBZ GLY A 25 UNP Q99717 ASP 25 CONFLICT SEQADV 6TBZ GLN A 26 UNP Q99717 GLU 26 CONFLICT SEQRES 1 A 131 THR SER PRO ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN SEQRES 2 A 131 GLY GLU GLN ASN GLY GLN GLU GLU LYS TRP ALA GLU LYS SEQRES 3 A 131 ALA VAL ASP ALA LEU VAL LYS LYS LEU LYS LYS LYS LYS SEQRES 4 A 131 GLY ALA MET GLU GLU LEU GLU LYS ALA LEU SER SER PRO SEQRES 5 A 131 GLY GLN PRO SER LYS CYS VAL THR ILE PRO ARG SER LEU SEQRES 6 A 131 ASP GLY ARG LEU GLN VAL SER HIS ARG LYS GLY LEU PRO SEQRES 7 A 131 HIS VAL ILE TYR CYS ARG VAL TRP ARG TRP PRO ASP LEU SEQRES 8 A 131 GLN SER HIS HIS GLU LEU LYS PRO LEU ASP ILE CYS GLU SEQRES 9 A 131 PHE PRO PHE GLY SER LYS GLN LYS GLU VAL CYS ILE ASN SEQRES 10 A 131 PRO TYR HIS TYR LYS ARG VAL GLU SER PRO VAL LEU PRO SEQRES 11 A 131 PRO SEQRES 1 B 16 DT DG DC DA DG DG DC DG DC DG DC DC DT SEQRES 2 B 16 DG DC DA SEQRES 1 C 16 DT DG DC DA DG DG DC DG DC DG DC DC DT SEQRES 2 C 16 DG DC DA HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *57(H2 O) HELIX 1 AA1 SER A 9 GLY A 17 1 9 HELIX 2 AA2 ASN A 24 LYS A 43 1 20 HELIX 3 AA3 GLY A 47 SER A 58 1 12 HELIX 4 AA4 LEU A 84 ARG A 94 1 11 HELIX 5 AA5 SER A 100 HIS A 102 5 3 HELIX 6 AA6 ASN A 124 TYR A 126 5 3 SHEET 1 AA1 2 THR A 67 PRO A 69 0 SHEET 2 AA1 2 GLU A 120 CYS A 122 -1 O VAL A 121 N ILE A 68 SHEET 1 AA2 2 LEU A 76 VAL A 78 0 SHEET 2 AA2 2 ARG A 81 GLY A 83 -1 O GLY A 83 N LEU A 76 SHEET 1 AA3 2 LEU A 104 PRO A 106 0 SHEET 2 AA3 2 TYR A 128 ARG A 130 -1 O LYS A 129 N LYS A 105 LINK SG CYS A 65 ZN ZN A 201 1555 1555 2.46 LINK SG CYS A 110 ZN ZN A 201 1555 1555 2.13 LINK SG CYS A 122 ZN ZN A 201 1555 1555 2.47 LINK ND1 HIS A 127 ZN ZN A 201 1555 1555 1.96 SITE 1 AC1 4 CYS A 65 CYS A 110 CYS A 122 HIS A 127 CRYST1 53.145 53.145 83.154 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018816 0.010864 0.000000 0.00000 SCALE2 0.000000 0.021727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012026 0.00000