HEADER BLOOD CLOTTING 28-NOV-19 6TKH TITLE TSETSE THROMBIN INHIBITOR IN COMPLEX WITH HUMAN ALPHA-THROMBIN - TITLE 2 ORTHORHOMBIC FORM AT 7KEV COMPND MOL_ID: 1; COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 SYNONYM: COAGULATION FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: THROMBIN HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 SYNONYM: COAGULATION FACTOR II; COMPND 10 EC: 3.4.21.5; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TSETSE THROMBIN INHIBITOR; COMPND 13 CHAIN: I; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: GLOSSINA MORSITANS MORSITANS; SOURCE 12 ORGANISM_TAXID: 37546 KEYWDS ANTICOAGULANT TYROSINE SULFATION POSTTRANSLATIONAL MODIFICATION KEYWDS 2 COMPLEX, BLOOD CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR B.M.CALISTO,J.RIPOLL-ROZADA,D.DE SANCTIS,P.J.B.PEREIRA REVDAT 3 24-JAN-24 6TKH 1 REMARK REVDAT 2 03-FEB-21 6TKH 1 JRNL REVDAT 1 04-NOV-20 6TKH 0 JRNL AUTH B.M.CALISTO,J.RIPOLL-ROZADA,L.J.DOWMAN,C.FRANCK,S.M.AGTEN, JRNL AUTH 2 B.L.PARKER,R.C.VELOSO,N.VALE,P.GOMES,D.DE SANCTIS,R.J.PAYNE, JRNL AUTH 3 P.J.B.PEREIRA JRNL TITL SULFOTYROSINE-MEDIATED RECOGNITION OF HUMAN THROMBIN BY A JRNL TITL 2 TSETSE FLY ANTICOAGULANT MIMICS PHYSIOLOGICAL SUBSTRATES. JRNL REF CELL CHEM BIOL V. 28 26 2021 JRNL REFN ESSN 2451-9456 JRNL PMID 33096052 JRNL DOI 10.1016/J.CHEMBIOL.2020.10.002 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 24536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 1278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6700 - 3.9600 1.00 2889 156 0.1536 0.1965 REMARK 3 2 3.9600 - 3.1400 0.98 2697 153 0.1458 0.1676 REMARK 3 3 3.1400 - 2.7500 0.98 2670 161 0.1626 0.1953 REMARK 3 4 2.7500 - 2.5000 0.97 2673 134 0.1629 0.2182 REMARK 3 5 2.5000 - 2.3200 0.96 2610 128 0.1690 0.1980 REMARK 3 6 2.3200 - 2.1800 0.94 2516 149 0.1690 0.2432 REMARK 3 7 2.1800 - 2.0700 0.92 2482 141 0.1702 0.1989 REMARK 3 8 2.0700 - 1.9800 0.90 2415 136 0.1889 0.2630 REMARK 3 9 1.9800 - 1.9000 0.86 2306 120 0.2228 0.2528 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2613 REMARK 3 ANGLE : 0.811 3532 REMARK 3 CHIRALITY : 0.056 365 REMARK 3 PLANARITY : 0.005 458 REMARK 3 DIHEDRAL : 23.074 1572 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 285 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6716 8.4219 -24.4255 REMARK 3 T TENSOR REMARK 3 T11: 0.3683 T22: 0.3538 REMARK 3 T33: 0.4666 T12: -0.0388 REMARK 3 T13: 0.0740 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 4.8740 L22: 0.5675 REMARK 3 L33: 7.0293 L12: 0.6552 REMARK 3 L13: 5.6071 L23: 0.6259 REMARK 3 S TENSOR REMARK 3 S11: -0.0181 S12: 0.1517 S13: -0.0676 REMARK 3 S21: -0.3368 S22: 0.1945 S23: -0.9328 REMARK 3 S31: -0.1970 S32: 0.7379 S33: -0.1951 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 300 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3870 12.2725 -30.7488 REMARK 3 T TENSOR REMARK 3 T11: 0.5272 T22: 0.3875 REMARK 3 T33: 0.2090 T12: 0.0415 REMARK 3 T13: 0.0313 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 5.0840 L22: 3.3938 REMARK 3 L33: 5.1545 L12: -0.9118 REMARK 3 L13: -5.0990 L23: 0.9419 REMARK 3 S TENSOR REMARK 3 S11: 0.4399 S12: 0.8257 S13: 0.7324 REMARK 3 S21: -0.2680 S22: 0.1196 S23: 0.2525 REMARK 3 S31: -1.1859 S32: -0.5170 S33: -0.4441 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 309 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5571 22.5409 -18.9859 REMARK 3 T TENSOR REMARK 3 T11: 0.4575 T22: 0.3087 REMARK 3 T33: 0.3879 T12: 0.0536 REMARK 3 T13: 0.0248 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 3.9225 L22: 4.3115 REMARK 3 L33: 2.5718 L12: -3.9126 REMARK 3 L13: -3.0388 L23: 3.3022 REMARK 3 S TENSOR REMARK 3 S11: 0.1749 S12: 0.0461 S13: 0.8772 REMARK 3 S21: -0.4594 S22: -0.3871 S23: 0.0937 REMARK 3 S31: -0.9253 S32: -0.3136 S33: 0.0455 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 321 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2126 -3.1981 -19.4145 REMARK 3 T TENSOR REMARK 3 T11: 0.3444 T22: 0.2074 REMARK 3 T33: 0.2497 T12: -0.0451 REMARK 3 T13: 0.0241 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 1.9937 L22: 1.6333 REMARK 3 L33: 1.7197 L12: -0.4612 REMARK 3 L13: -0.9932 L23: 0.0590 REMARK 3 S TENSOR REMARK 3 S11: -0.2226 S12: 0.0809 S13: -0.2620 REMARK 3 S21: -0.0520 S22: 0.1830 S23: 0.0886 REMARK 3 S31: 0.4137 S32: -0.4035 S33: 0.0040 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 345 THROUGH 365 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5593 -3.7117 -13.3030 REMARK 3 T TENSOR REMARK 3 T11: 0.2879 T22: 0.2264 REMARK 3 T33: 0.2854 T12: 0.0795 REMARK 3 T13: 0.0581 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.8833 L22: 3.4759 REMARK 3 L33: 5.3721 L12: -1.1382 REMARK 3 L13: 0.8127 L23: 0.9016 REMARK 3 S TENSOR REMARK 3 S11: -0.3172 S12: -0.3302 S13: -0.3427 REMARK 3 S21: -0.0528 S22: 0.0771 S23: -0.3384 REMARK 3 S31: 0.7435 S32: 0.5526 S33: 0.3165 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 366 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1959 -11.6233 -7.1760 REMARK 3 T TENSOR REMARK 3 T11: 0.6253 T22: 0.2606 REMARK 3 T33: 0.4383 T12: 0.1550 REMARK 3 T13: 0.1840 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 0.6421 L22: 0.3125 REMARK 3 L33: 4.1835 L12: -0.4194 REMARK 3 L13: -1.5614 L23: 1.1904 REMARK 3 S TENSOR REMARK 3 S11: -0.9325 S12: -0.0462 S13: -0.6908 REMARK 3 S21: 0.0202 S22: -0.2120 S23: -0.0279 REMARK 3 S31: 1.6509 S32: 0.5219 S33: 0.4905 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 384 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2341 -9.5801 -22.0379 REMARK 3 T TENSOR REMARK 3 T11: 0.3582 T22: 0.2116 REMARK 3 T33: 0.2917 T12: 0.0539 REMARK 3 T13: 0.0874 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.3581 L22: 2.8340 REMARK 3 L33: 3.8144 L12: -0.1346 REMARK 3 L13: 1.1328 L23: 0.4318 REMARK 3 S TENSOR REMARK 3 S11: -0.0607 S12: 0.0273 S13: -0.4704 REMARK 3 S21: -0.4962 S22: 0.1237 S23: -0.0745 REMARK 3 S31: 0.5593 S32: 0.1117 S33: -0.1273 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 407 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5206 0.0744 2.8450 REMARK 3 T TENSOR REMARK 3 T11: 0.2669 T22: 0.3530 REMARK 3 T33: 0.1980 T12: 0.0870 REMARK 3 T13: -0.0137 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 6.6754 L22: 7.0244 REMARK 3 L33: 6.4256 L12: 0.9348 REMARK 3 L13: -4.9541 L23: -1.9733 REMARK 3 S TENSOR REMARK 3 S11: 0.0710 S12: -0.6873 S13: 0.1437 REMARK 3 S21: 0.5025 S22: -0.2594 S23: -0.3897 REMARK 3 S31: -0.1549 S32: 0.8615 S33: 0.1869 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 421 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8340 7.0976 -17.7892 REMARK 3 T TENSOR REMARK 3 T11: 0.2157 T22: 0.2401 REMARK 3 T33: 0.2253 T12: -0.0108 REMARK 3 T13: 0.0369 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.6519 L22: 2.4193 REMARK 3 L33: 2.4513 L12: -0.2268 REMARK 3 L13: -0.9753 L23: 0.3880 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: 0.0383 S13: 0.0660 REMARK 3 S21: -0.1615 S22: 0.0851 S23: -0.3406 REMARK 3 S31: -0.0956 S32: 0.3837 S33: -0.0625 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 461 THROUGH 495 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2344 5.0263 -10.8563 REMARK 3 T TENSOR REMARK 3 T11: 0.2009 T22: 0.2308 REMARK 3 T33: 0.2180 T12: 0.0083 REMARK 3 T13: 0.0079 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.2396 L22: 0.8224 REMARK 3 L33: 3.3598 L12: -0.5980 REMARK 3 L13: -0.8727 L23: 0.2390 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.0345 S13: -0.0503 REMARK 3 S21: 0.0467 S22: -0.0565 S23: 0.0947 REMARK 3 S31: -0.0315 S32: -0.4685 S33: -0.0073 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 496 THROUGH 514 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0427 11.4655 -0.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.2499 T22: 0.1674 REMARK 3 T33: 0.1928 T12: 0.0268 REMARK 3 T13: 0.0402 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 3.8463 L22: 2.2448 REMARK 3 L33: 5.9761 L12: 0.3578 REMARK 3 L13: -0.1887 L23: -0.1776 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.3581 S13: 0.2796 REMARK 3 S21: 0.2755 S22: 0.1465 S23: -0.0301 REMARK 3 S31: -0.5225 S32: -0.1992 S33: -0.0600 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 515 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8364 3.3841 -10.6332 REMARK 3 T TENSOR REMARK 3 T11: 0.1957 T22: 0.2506 REMARK 3 T33: 0.2431 T12: 0.0003 REMARK 3 T13: 0.0101 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 2.2898 L22: 7.8389 REMARK 3 L33: 5.5150 L12: -3.0698 REMARK 3 L13: -1.0925 L23: 1.9002 REMARK 3 S TENSOR REMARK 3 S11: -0.0877 S12: -0.2120 S13: -0.1104 REMARK 3 S21: 0.1723 S22: 0.1351 S23: 0.5827 REMARK 3 S31: 0.2364 S32: -0.7014 S33: -0.0126 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 528 THROUGH 563 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5180 9.7207 -10.9458 REMARK 3 T TENSOR REMARK 3 T11: 0.2064 T22: 0.1494 REMARK 3 T33: 0.1747 T12: 0.0070 REMARK 3 T13: 0.0019 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.6626 L22: 2.7869 REMARK 3 L33: 3.4653 L12: -0.4496 REMARK 3 L13: -0.7889 L23: -0.2158 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: -0.0905 S13: 0.1447 REMARK 3 S21: 0.0102 S22: 0.0674 S23: -0.0082 REMARK 3 S31: -0.1987 S32: -0.0774 S33: -0.0491 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 564 THROUGH 578 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1084 4.9524 -7.9257 REMARK 3 T TENSOR REMARK 3 T11: 0.2614 T22: 0.5972 REMARK 3 T33: 0.3901 T12: 0.0483 REMARK 3 T13: 0.0078 T23: 0.0580 REMARK 3 L TENSOR REMARK 3 L11: 8.6968 L22: 8.6873 REMARK 3 L33: 3.8052 L12: -6.1316 REMARK 3 L13: -2.8392 L23: 2.6996 REMARK 3 S TENSOR REMARK 3 S11: -0.3415 S12: -0.4416 S13: 0.3223 REMARK 3 S21: 0.0862 S22: 0.2045 S23: -1.0907 REMARK 3 S31: -0.1139 S32: 1.5312 S33: -0.0428 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 1 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7274 12.5876 0.2606 REMARK 3 T TENSOR REMARK 3 T11: 0.4033 T22: 0.4916 REMARK 3 T33: 0.4573 T12: -0.0353 REMARK 3 T13: -0.0436 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 3.5409 L22: 4.6977 REMARK 3 L33: 7.8618 L12: 3.3770 REMARK 3 L13: -3.5513 L23: -5.8307 REMARK 3 S TENSOR REMARK 3 S11: 0.1622 S12: -0.7042 S13: -0.2742 REMARK 3 S21: 0.5993 S22: -0.8266 S23: -0.8753 REMARK 3 S31: -0.6003 S32: 1.3145 S33: 0.3871 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 24 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1337 -2.0091 3.3515 REMARK 3 T TENSOR REMARK 3 T11: 0.3521 T22: 0.2561 REMARK 3 T33: 0.1991 T12: 0.0014 REMARK 3 T13: 0.0348 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 4.0965 L22: 3.8370 REMARK 3 L33: 6.1855 L12: 0.3553 REMARK 3 L13: 0.1572 L23: -1.8656 REMARK 3 S TENSOR REMARK 3 S11: -0.3697 S12: 0.4696 S13: -0.1311 REMARK 3 S21: -0.3774 S22: 0.4735 S23: -0.0887 REMARK 3 S31: 0.5665 S32: -0.0956 S33: -0.1526 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TKH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.771 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24586 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 58.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.71400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3U69 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 0.2 M AMMONIUM REMARK 280 ACETATE, 25 % (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.21850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.66900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.52250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.66900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.21850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.52250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP H 468 REMARK 465 THR H 469 REMARK 465 ALA H 470 REMARK 465 ASN H 471 REMARK 465 VAL H 472 REMARK 465 GLY H 473 REMARK 465 LYS H 474 REMARK 465 GLU H 579 REMARK 465 MET I -20 REMARK 465 LYS I -19 REMARK 465 PHE I -18 REMARK 465 PHE I -17 REMARK 465 THR I -16 REMARK 465 VAL I -15 REMARK 465 LEU I -14 REMARK 465 PHE I -13 REMARK 465 PHE I -12 REMARK 465 LEU I -11 REMARK 465 LEU I -10 REMARK 465 SER I -9 REMARK 465 ILE I -8 REMARK 465 ILE I -7 REMARK 465 TYR I -6 REMARK 465 LEU I -5 REMARK 465 ILE I -4 REMARK 465 VAL I -3 REMARK 465 ALA I -2 REMARK 465 ALA I -1 REMARK 465 PRO I 0 REMARK 465 GLY I 13 REMARK 465 ASP I 14 REMARK 465 SER I 15 REMARK 465 SER I 16 REMARK 465 GLU I 17 REMARK 465 GLU I 18 REMARK 465 VAL I 19 REMARK 465 LEU I 32 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE L 299 -82.31 -128.91 REMARK 500 ARG H 356 10.22 -141.73 REMARK 500 TYR H 367 83.62 -155.34 REMARK 500 ASN H 373 76.53 -157.33 REMARK 500 HIS H 386 -56.59 -133.27 REMARK 500 ILE H 395 -58.47 -129.14 REMARK 500 GLU H 414 -90.15 -118.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 604 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG H 553 O REMARK 620 2 LYS H 556 O 89.1 REMARK 620 3 HOH H 740 O 109.5 161.2 REMARK 620 4 HOH H 757 O 153.3 68.8 92.5 REMARK 620 5 HOH H 776 O 85.6 92.8 86.1 80.9 REMARK 620 6 HOH H 812 O 99.5 76.4 102.4 90.0 167.9 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TKG RELATED DB: PDB DBREF 6TKH L 285 320 UNP P00734 THRB_HUMAN 328 363 DBREF 6TKH H 321 579 UNP P00734 THRB_HUMAN 364 622 DBREF 6TKH I -20 32 UNP O97373 TTI_GLOMM 1 53 SEQRES 1 L 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 L 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 L 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 I 53 MET LYS PHE PHE THR VAL LEU PHE PHE LEU LEU SER ILE SEQRES 2 I 53 ILE TYR LEU ILE VAL ALA ALA PRO GLY GLU PRO GLY ALA SEQRES 3 I 53 PRO ILE ASP TYS ASP GLU TYS GLY ASP SER SER GLU GLU SEQRES 4 I 53 VAL GLY GLY THR PRO LEU HIS GLU ILE PRO GLY ILE ARG SEQRES 5 I 53 LEU MODRES 6TKH TYS I 9 TYR MODIFIED RESIDUE MODRES 6TKH TYS I 12 TYR MODIFIED RESIDUE HET TYS I 9 16 HET TYS I 12 16 HET GOL H 601 6 HET GOL H 602 6 HET NAG H 603 14 HET NA H 604 1 HETNAM TYS O-SULFO-L-TYROSINE HETNAM GOL GLYCEROL HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 TYS 2(C9 H11 N O6 S) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 NAG C8 H15 N O6 FORMUL 7 NA NA 1+ FORMUL 8 HOH *169(H2 O) HELIX 1 AA1 PHE L 299 SER L 303 5 5 HELIX 2 AA2 THR L 308 TYR L 316 1 9 HELIX 3 AA3 ALA H 361 LEU H 365 1 5 HELIX 4 AA4 PRO H 368 ASP H 371 5 4 HELIX 5 AA5 THR H 375 ASN H 377 5 3 HELIX 6 AA6 ASP H 442 LEU H 450 1 9 HELIX 7 AA7 GLU H 489 SER H 496 1 8 HELIX 8 AA8 LYS H 511 GLY H 515 5 5 HELIX 9 AA9 LEU H 566 GLY H 578 1 13 HELIX 10 AB1 PRO I 23 ILE I 27 5 5 SHEET 1 AA1 7 SER H 325 ASP H 326 0 SHEET 2 AA1 7 GLN H 481 PRO H 486 -1 O VAL H 482 N SER H 325 SHEET 3 AA1 7 LYS H 455 GLY H 460 -1 N VAL H 458 O VAL H 483 SHEET 4 AA1 7 PRO H 528 LYS H 532 -1 O VAL H 530 N ARG H 457 SHEET 5 AA1 7 TRP H 539 GLU H 549 -1 O TYR H 540 N MET H 531 SHEET 6 AA1 7 GLY H 558 HIS H 562 -1 O PHE H 559 N TRP H 547 SHEET 7 AA1 7 MET H 505 ALA H 508 -1 N PHE H 506 O TYR H 560 SHEET 1 AA2 6 SER H 325 ASP H 326 0 SHEET 2 AA2 6 GLN H 481 PRO H 486 -1 O VAL H 482 N SER H 325 SHEET 3 AA2 6 LYS H 455 GLY H 460 -1 N VAL H 458 O VAL H 483 SHEET 4 AA2 6 PRO H 528 LYS H 532 -1 O VAL H 530 N ARG H 457 SHEET 5 AA2 6 TRP H 539 GLU H 549 -1 O TYR H 540 N MET H 531 SHEET 6 AA2 6 ILE I 30 ARG I 31 -1 O ARG I 31 N GLY H 548 SHEET 1 AA3 7 LYS H 397 SER H 399 0 SHEET 2 AA3 7 LEU H 379 ILE H 383 -1 N ILE H 383 O LYS H 397 SHEET 3 AA3 7 GLN H 335 ARG H 340 -1 N PHE H 339 O LEU H 380 SHEET 4 AA3 7 GLU H 345 LEU H 352 -1 O LEU H 347 N LEU H 338 SHEET 5 AA3 7 TRP H 357 THR H 360 -1 O LEU H 359 N SER H 351 SHEET 6 AA3 7 ALA H 421 LEU H 425 -1 O MET H 423 N VAL H 358 SHEET 7 AA3 7 LEU H 401 ILE H 406 -1 N GLU H 402 O LYS H 424 SHEET 1 AA4 2 LEU H 366 TYR H 367 0 SHEET 2 AA4 2 LYS H 372 ASN H 373 -1 O LYS H 372 N TYR H 367 SSBOND 1 CYS L 293 CYS H 439 1555 1555 2.05 SSBOND 2 CYS H 348 CYS H 364 1555 1555 2.03 SSBOND 3 CYS H 493 CYS H 507 1555 1555 2.03 SSBOND 4 CYS H 521 CYS H 551 1555 1555 2.05 LINK ND2 ASN H 373 C1 NAG H 603 1555 1555 1.44 LINK C ASP I 8 N TYS I 9 1555 1555 1.33 LINK C TYS I 9 N ASP I 10 1555 1555 1.33 LINK C GLU I 11 N TYS I 12 1555 1555 1.33 LINK O ARG H 553 NA NA H 604 1555 1555 2.33 LINK O LYS H 556 NA NA H 604 1555 1555 2.51 LINK NA NA H 604 O HOH H 740 1555 1555 2.23 LINK NA NA H 604 O HOH H 757 1555 1555 2.48 LINK NA NA H 604 O HOH H 776 1555 1555 2.75 LINK NA NA H 604 O HOH H 812 1555 1555 2.37 CISPEP 1 SER H 342 PRO H 343 0 -3.78 CRYST1 46.437 81.045 85.338 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012339 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011718 0.00000