HEADER PROTEIN BINDING 17-DEC-19 6TQU TITLE THE CRYSTAL STRUCTURE OF THE MSP DOMAIN OF HUMAN MOSPD2 IN COMPLEX TITLE 2 WITH THE PHOSPHO-FFAT MOTIF OF STARD3. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTILE SPERM DOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: MSP DOMAIN; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: STAR-RELATED LIPID TRANSFER PROTEIN 3; COMPND 8 CHAIN: C, D; COMPND 9 SYNONYM: METASTATIC LYMPH NODE GENE 64 PROTEIN,MLN 64,PROTEIN CAB1, COMPND 10 START DOMAIN-CONTAINING PROTEIN 3,STARD3; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: PHOSPHO-FFAT MOTIF SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MOSPD2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS MEMBRANE CONTACT SITES, FFAT MOTIF, MSP DOMAIN, ENDOPLASMIC KEYWDS 2 RETICULUM, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.G.MCEWEN,P.POUSSIN-COURMONTAGNE,T.DI MATTIA,C.WENDLING,J.CAVARELLI, AUTHOR 2 C.TOMASETTO,F.ALPY REVDAT 3 24-JAN-24 6TQU 1 REMARK REVDAT 2 16-DEC-20 6TQU 1 JRNL REVDAT 1 18-NOV-20 6TQU 0 JRNL AUTH T.DI MATTIA,A.MARTINET,S.IKHLEF,A.G.MCEWEN,Y.NOMINE, JRNL AUTH 2 C.WENDLING,P.POUSSIN-COURMONTAGNE,L.VOILQUIN,P.EBERLING, JRNL AUTH 3 F.RUFFENACH,J.CAVARELLI,J.SLEE,T.P.LEVINE,G.DRIN, JRNL AUTH 4 C.TOMASETTO,F.ALPY JRNL TITL FFAT MOTIF PHOSPHORYLATION CONTROLS FORMATION AND LIPID JRNL TITL 2 TRANSFER FUNCTION OF INTER-ORGANELLE CONTACTS. JRNL REF EMBO J. V. 39 04369 2020 JRNL REFN ESSN 1460-2075 JRNL PMID 33124732 JRNL DOI 10.15252/EMBJ.2019104369 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV-3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.730 REMARK 3 FREE R VALUE TEST SET COUNT : 716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9800 - 4.1000 1.00 3029 173 0.1666 0.2234 REMARK 3 2 4.1000 - 3.2600 1.00 2833 190 0.1668 0.2344 REMARK 3 3 3.2600 - 2.8500 1.00 2881 115 0.2183 0.2755 REMARK 3 4 2.8500 - 2.5900 1.00 2848 114 0.2389 0.2759 REMARK 3 5 2.5900 - 2.4000 1.00 2842 124 0.2435 0.3291 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1259 32.6665 30.7922 REMARK 3 T TENSOR REMARK 3 T11: 0.4602 T22: 0.5949 REMARK 3 T33: 0.3591 T12: -0.0018 REMARK 3 T13: -0.0424 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 4.2720 L22: 4.7680 REMARK 3 L33: 2.5976 L12: -0.5620 REMARK 3 L13: 0.7392 L23: 0.4668 REMARK 3 S TENSOR REMARK 3 S11: 0.0884 S12: 0.1778 S13: -0.0694 REMARK 3 S21: -0.1902 S22: -0.0335 S23: -0.2529 REMARK 3 S31: -0.2000 S32: 0.0750 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1518 10.5295 33.2825 REMARK 3 T TENSOR REMARK 3 T11: 0.4701 T22: 0.6004 REMARK 3 T33: 0.6450 T12: 0.0031 REMARK 3 T13: -0.0989 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 6.6146 L22: 4.6244 REMARK 3 L33: 3.2816 L12: -1.0091 REMARK 3 L13: 1.0459 L23: 0.1466 REMARK 3 S TENSOR REMARK 3 S11: 0.2366 S12: 0.7562 S13: -0.8799 REMARK 3 S21: -0.4748 S22: -0.0042 S23: 0.6011 REMARK 3 S31: 0.4521 S32: -0.1274 S33: 0.0282 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1531 33.8980 35.4357 REMARK 3 T TENSOR REMARK 3 T11: 0.5977 T22: 0.7562 REMARK 3 T33: 0.5546 T12: 0.0465 REMARK 3 T13: -0.1004 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 0.8548 L22: 0.9230 REMARK 3 L33: 0.6252 L12: -0.3881 REMARK 3 L13: -0.3878 L23: -0.1726 REMARK 3 S TENSOR REMARK 3 S11: -0.1564 S12: -1.0372 S13: 0.0558 REMARK 3 S21: 0.7451 S22: -0.0463 S23: -0.2262 REMARK 3 S31: 0.2655 S32: 0.6477 S33: -0.0012 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5101 9.4243 40.9738 REMARK 3 T TENSOR REMARK 3 T11: 0.7306 T22: 0.7645 REMARK 3 T33: 0.6572 T12: 0.1236 REMARK 3 T13: 0.0107 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.1589 L22: 1.1795 REMARK 3 L33: 0.5828 L12: -0.7128 REMARK 3 L13: 0.5595 L23: -0.6291 REMARK 3 S TENSOR REMARK 3 S11: 0.2773 S12: 0.3915 S13: -0.7455 REMARK 3 S21: 0.8231 S22: 0.7320 S23: 0.8034 REMARK 3 S31: 1.1626 S32: -0.2634 S33: 0.0551 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105901. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15203 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 87.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 24.90 REMARK 200 R MERGE (I) : 0.25800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 26.30 REMARK 200 R MERGE FOR SHELL (I) : 3.97600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 6TQT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.5% PEG 2000, 7.5% PEG 3350, 7.5% PEG REMARK 280 4000, 7.5% PEG 5000 MME, 0.05 M MAGNESIUM SULFATE, 0.1 M HEPES REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.56500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.98400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.98400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.78250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.98400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.98400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.34750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.98400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.98400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.78250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.98400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.98400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.34750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.56500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 501 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 311 REMARK 465 SER A 312 REMARK 465 HIS A 313 REMARK 465 MET A 314 REMARK 465 ALA A 315 REMARK 465 PHE A 316 REMARK 465 LYS A 317 REMARK 465 LYS A 318 REMARK 465 PRO A 319 REMARK 465 LEU A 320 REMARK 465 SER A 321 REMARK 465 GLY B 311 REMARK 465 SER B 312 REMARK 465 HIS B 313 REMARK 465 MET B 314 REMARK 465 ALA B 315 REMARK 465 PHE B 316 REMARK 465 LYS B 317 REMARK 465 LYS B 318 REMARK 465 PRO B 319 REMARK 465 LEU B 320 REMARK 465 SER B 321 REMARK 465 VAL B 322 REMARK 465 CYS C 196 REMARK 465 LEU C 197 REMARK 465 PHE C 198 REMARK 465 SER C 199 REMARK 465 GLY C 200 REMARK 465 ALA C 201 REMARK 465 LEU C 202 REMARK 465 SEP C 203 REMARK 465 GLU C 204 REMARK 465 GLY C 205 REMARK 465 GLY C 216 REMARK 465 CYS D 196 REMARK 465 LEU D 197 REMARK 465 PHE D 198 REMARK 465 SER D 199 REMARK 465 GLY D 200 REMARK 465 ALA D 201 REMARK 465 LEU D 202 REMARK 465 SEP D 203 REMARK 465 ALA D 215 REMARK 465 GLY D 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 357 CD CE NZ REMARK 470 ARG A 373 CD NE CZ NH1 NH2 REMARK 470 LYS A 375 CD CE NZ REMARK 470 PHE B 323 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 324 CG CD CE NZ REMARK 470 GLU B 334 CG CD OE1 OE2 REMARK 470 LYS B 357 CG CD CE NZ REMARK 470 GLU B 413 CG CD OE1 OE2 REMARK 470 GLN B 414 CG CD OE1 NE2 REMARK 470 SER B 415 OG REMARK 470 ARG B 432 CD NE CZ NH1 NH2 REMARK 470 LYS B 434 CG CD CE NZ REMARK 470 GLU D 204 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 334 -42.59 -132.54 REMARK 500 THR A 356 -168.64 -106.50 REMARK 500 SER A 379 -158.75 -152.28 REMARK 500 SER A 415 -27.14 79.39 REMARK 500 ASN A 433 2.93 -64.83 REMARK 500 THR A 444 -63.50 -135.08 REMARK 500 GLU B 334 -41.10 -139.95 REMARK 500 ASN B 378 88.46 -161.63 REMARK 500 SER B 379 -156.75 -150.02 REMARK 500 SER B 415 -34.70 -178.04 REMARK 500 GLN D 206 -69.22 -166.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 DBREF 6TQU A 315 445 UNP Q8NHP6 MSPD2_HUMAN 315 445 DBREF 6TQU B 315 445 UNP Q8NHP6 MSPD2_HUMAN 315 445 DBREF 6TQU C 196 216 UNP Q14849 STAR3_HUMAN 196 216 DBREF 6TQU D 196 216 UNP Q14849 STAR3_HUMAN 196 216 SEQADV 6TQU GLY A 311 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU SER A 312 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU HIS A 313 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU MET A 314 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU GLY B 311 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU SER B 312 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU HIS B 313 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU MET B 314 UNP Q8NHP6 EXPRESSION TAG SEQADV 6TQU CYS C 196 UNP Q14849 LEU 196 CONFLICT SEQADV 6TQU CYS D 196 UNP Q14849 LEU 196 CONFLICT SEQRES 1 A 135 GLY SER HIS MET ALA PHE LYS LYS PRO LEU SER VAL PHE SEQRES 2 A 135 LYS GLY PRO LEU LEU HIS ILE SER PRO ALA GLU GLU LEU SEQRES 3 A 135 TYR PHE GLY SER THR GLU SER GLY GLU LYS LYS THR LEU SEQRES 4 A 135 ILE VAL LEU THR ASN VAL THR LYS ASN ILE VAL ALA PHE SEQRES 5 A 135 LYS VAL ARG THR THR ALA PRO GLU LYS TYR ARG VAL LYS SEQRES 6 A 135 PRO SER ASN SER SER CYS ASP PRO GLY ALA SER VAL ASP SEQRES 7 A 135 ILE VAL VAL SER PRO HIS GLY GLY LEU THR VAL SER ALA SEQRES 8 A 135 GLN ASP ARG PHE LEU ILE MET ALA ALA GLU MET GLU GLN SEQRES 9 A 135 SER SER GLY THR GLY PRO ALA GLU LEU THR GLN PHE TRP SEQRES 10 A 135 LYS GLU VAL PRO ARG ASN LYS VAL MET GLU HIS ARG LEU SEQRES 11 A 135 ARG CYS HIS THR VAL SEQRES 1 B 135 GLY SER HIS MET ALA PHE LYS LYS PRO LEU SER VAL PHE SEQRES 2 B 135 LYS GLY PRO LEU LEU HIS ILE SER PRO ALA GLU GLU LEU SEQRES 3 B 135 TYR PHE GLY SER THR GLU SER GLY GLU LYS LYS THR LEU SEQRES 4 B 135 ILE VAL LEU THR ASN VAL THR LYS ASN ILE VAL ALA PHE SEQRES 5 B 135 LYS VAL ARG THR THR ALA PRO GLU LYS TYR ARG VAL LYS SEQRES 6 B 135 PRO SER ASN SER SER CYS ASP PRO GLY ALA SER VAL ASP SEQRES 7 B 135 ILE VAL VAL SER PRO HIS GLY GLY LEU THR VAL SER ALA SEQRES 8 B 135 GLN ASP ARG PHE LEU ILE MET ALA ALA GLU MET GLU GLN SEQRES 9 B 135 SER SER GLY THR GLY PRO ALA GLU LEU THR GLN PHE TRP SEQRES 10 B 135 LYS GLU VAL PRO ARG ASN LYS VAL MET GLU HIS ARG LEU SEQRES 11 B 135 ARG CYS HIS THR VAL SEQRES 1 C 21 CYS LEU PHE SER GLY ALA LEU SEP GLU GLY GLN PHE TYR SEQRES 2 C 21 SEP PRO PRO GLU SEP PHE ALA GLY SEQRES 1 D 21 CYS LEU PHE SER GLY ALA LEU SEP GLU GLY GLN PHE TYR SEQRES 2 D 21 SEP PRO PRO GLU SEP PHE ALA GLY MODRES 6TQU SEP C 209 SER MODIFIED RESIDUE MODRES 6TQU SEP C 213 SER MODIFIED RESIDUE MODRES 6TQU SEP D 209 SER MODIFIED RESIDUE MODRES 6TQU SEP D 213 SER MODIFIED RESIDUE HET SEP C 209 10 HET SEP C 213 10 HET SEP D 209 10 HET SEP D 213 10 HET SO4 B 501 5 HETNAM SEP PHOSPHOSERINE HETNAM SO4 SULFATE ION HETSYN SEP PHOSPHONOSERINE FORMUL 3 SEP 4(C3 H8 N O6 P) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *89(H2 O) HELIX 1 AA1 GLY A 419 VAL A 430 1 12 HELIX 2 AA2 PRO A 431 VAL A 435 5 5 HELIX 3 AA3 GLY B 419 VAL B 430 1 12 HELIX 4 AA4 PRO B 431 ASN B 433 5 3 SHEET 1 AA1 4 PHE A 323 LYS A 324 0 SHEET 2 AA1 4 LEU A 328 SER A 331 -1 O ILE A 330 N PHE A 323 SHEET 3 AA1 4 LYS A 346 ASN A 354 -1 O THR A 353 N HIS A 329 SHEET 4 AA1 4 GLY A 339 SER A 340 -1 N GLY A 339 O LYS A 347 SHEET 1 AA2 5 PHE A 323 LYS A 324 0 SHEET 2 AA2 5 LEU A 328 SER A 331 -1 O ILE A 330 N PHE A 323 SHEET 3 AA2 5 LYS A 346 ASN A 354 -1 O THR A 353 N HIS A 329 SHEET 4 AA2 5 SER A 386 PRO A 393 -1 O ILE A 389 N ILE A 350 SHEET 5 AA2 5 TYR A 372 LYS A 375 -1 N ARG A 373 O SER A 392 SHEET 1 AA3 5 GLU A 335 LEU A 336 0 SHEET 2 AA3 5 MET A 436 CYS A 442 1 O ARG A 441 N LEU A 336 SHEET 3 AA3 5 ARG A 404 GLU A 411 -1 N ILE A 407 O HIS A 438 SHEET 4 AA3 5 VAL A 360 THR A 366 -1 N ARG A 365 O LEU A 406 SHEET 5 AA3 5 ASN A 378 CYS A 381 -1 O SER A 379 N PHE A 362 SHEET 1 AA4 3 LEU B 328 SER B 331 0 SHEET 2 AA4 3 LYS B 346 ASN B 354 -1 O THR B 353 N HIS B 329 SHEET 3 AA4 3 GLY B 339 SER B 340 -1 N GLY B 339 O LYS B 347 SHEET 1 AA5 4 LEU B 328 SER B 331 0 SHEET 2 AA5 4 LYS B 346 ASN B 354 -1 O THR B 353 N HIS B 329 SHEET 3 AA5 4 SER B 386 PRO B 393 -1 O ILE B 389 N ILE B 350 SHEET 4 AA5 4 TYR B 372 LYS B 375 -1 N ARG B 373 O SER B 392 SHEET 1 AA6 5 GLU B 335 LEU B 336 0 SHEET 2 AA6 5 VAL B 435 CYS B 442 1 O ARG B 441 N LEU B 336 SHEET 3 AA6 5 ARG B 404 GLU B 411 -1 N ALA B 409 O MET B 436 SHEET 4 AA6 5 VAL B 360 THR B 366 -1 N ARG B 365 O LEU B 406 SHEET 5 AA6 5 ASN B 378 CYS B 381 -1 O SER B 379 N PHE B 362 LINK C TYR C 208 N SEP C 209 1555 1555 1.32 LINK C SEP C 209 N PRO C 210 1555 1555 1.33 LINK C GLU C 212 N SEP C 213 1555 1555 1.33 LINK C SEP C 213 N PHE C 214 1555 1555 1.33 LINK C TYR D 208 N SEP D 209 1555 1555 1.32 LINK C SEP D 209 N PRO D 210 1555 1555 1.34 LINK C GLU D 212 N SEP D 213 1555 1555 1.33 LINK C SEP D 213 N PHE D 214 1555 1555 1.33 CISPEP 1 SER A 331 PRO A 332 0 2.57 CISPEP 2 LYS A 375 PRO A 376 0 -8.07 CISPEP 3 SER B 331 PRO B 332 0 -1.88 CISPEP 4 LYS B 375 PRO B 376 0 -8.07 SITE 1 AC1 4 ARG B 373 HIS B 394 GLY B 395 HOH B 601 CRYST1 87.968 87.968 95.130 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010512 0.00000