HEADER HYDROLASE 17-DEC-19 6TR5 TITLE MELATONIN-NOTUM COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PALMITOLEOYL-PROTEIN CARBOXYLESTERASE NOTUM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HNOTUM; COMPND 5 EC: 3.1.1.98; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NOTUM, OK/SW-CL.30; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS WNT NOTUM INHIBITOR MELATONIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHAO,E.Y.JONES REVDAT 4 24-JAN-24 6TR5 1 HETSYN REVDAT 3 29-JUL-20 6TR5 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 19-FEB-20 6TR5 1 JRNL REVDAT 1 15-JAN-20 6TR5 0 JRNL AUTH Y.ZHAO,J.REN,J.HILLIER,M.JONES,W.LU,E.Y.JONES JRNL TITL STRUCTURAL CHARACTERIZATION OF MELATONIN AS AN INHIBITOR OF JRNL TITL 2 THE WNT DEACYLASE NOTUM. JRNL REF J. PINEAL RES. V. 68 12630 2020 JRNL REFN ISSN 1600-079X JRNL PMID 31876313 JRNL DOI 10.1111/JPI.12630 REMARK 2 REMARK 2 RESOLUTION. 1.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 54785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 2808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.6800 - 4.0962 1.00 2880 109 0.1848 0.1987 REMARK 3 2 4.0962 - 3.2514 1.00 2702 159 0.1715 0.1893 REMARK 3 3 3.2514 - 2.8404 1.00 2662 156 0.1841 0.2221 REMARK 3 4 2.8404 - 2.5807 1.00 2650 163 0.1905 0.2378 REMARK 3 5 2.5807 - 2.3957 1.00 2638 144 0.1885 0.1885 REMARK 3 6 2.3957 - 2.2545 1.00 2608 154 0.1820 0.2380 REMARK 3 7 2.2545 - 2.1416 1.00 2633 148 0.1776 0.2047 REMARK 3 8 2.1416 - 2.0484 1.00 2602 156 0.1842 0.2227 REMARK 3 9 2.0484 - 1.9695 1.00 2623 132 0.1814 0.2221 REMARK 3 10 1.9695 - 1.9015 1.00 2614 135 0.1851 0.2278 REMARK 3 11 1.9015 - 1.8421 0.99 2620 125 0.1983 0.2252 REMARK 3 12 1.8421 - 1.7894 0.99 2588 140 0.2133 0.2341 REMARK 3 13 1.7894 - 1.7423 0.99 2605 119 0.2186 0.2712 REMARK 3 14 1.7423 - 1.6998 0.99 2594 141 0.2464 0.3028 REMARK 3 15 1.6998 - 1.6612 0.99 2538 152 0.2620 0.2706 REMARK 3 16 1.6612 - 1.6258 0.98 2567 135 0.2930 0.3403 REMARK 3 17 1.6258 - 1.5933 0.97 2570 124 0.3109 0.3259 REMARK 3 18 1.5933 - 1.5632 0.95 2481 138 0.3323 0.3876 REMARK 3 19 1.5632 - 1.5353 0.95 2470 132 0.3517 0.3822 REMARK 3 20 1.5353 - 1.5093 0.91 2332 146 0.3765 0.4083 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3626 -14.6874 -5.7761 REMARK 3 T TENSOR REMARK 3 T11: 0.1176 T22: 0.1554 REMARK 3 T33: 0.1490 T12: -0.0191 REMARK 3 T13: 0.0043 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.6497 L22: 1.0360 REMARK 3 L33: 0.7068 L12: -0.1078 REMARK 3 L13: -0.3124 L23: -0.3485 REMARK 3 S TENSOR REMARK 3 S11: -0.0459 S12: 0.0328 S13: -0.0992 REMARK 3 S21: -0.0628 S22: -0.0006 S23: -0.0785 REMARK 3 S31: 0.0589 S32: 0.0469 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 452 THROUGH 452 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2095 -10.8571 2.2161 REMARK 3 T TENSOR REMARK 3 T11: 0.8397 T22: 0.8580 REMARK 3 T33: 0.7030 T12: -0.1707 REMARK 3 T13: 0.0928 T23: -0.2801 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 2.0000 REMARK 3 L33: 2.0000 L12: 2.0000 REMARK 3 L13: 2.0000 L23: 2.0000 REMARK 3 S TENSOR REMARK 3 S11: 2.3786 S12: 0.2401 S13: 0.6823 REMARK 3 S21: 4.5398 S22: -3.1109 S23: 5.4692 REMARK 3 S31: -0.1511 S32: -4.2971 S33: 0.7260 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8131 10.8891 1.2456 REMARK 3 T TENSOR REMARK 3 T11: 0.1989 T22: 0.1450 REMARK 3 T33: 0.1904 T12: -0.0075 REMARK 3 T13: -0.0092 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.0559 L22: 1.3798 REMARK 3 L33: 0.3752 L12: 0.1301 REMARK 3 L13: 0.2496 L23: 0.5464 REMARK 3 S TENSOR REMARK 3 S11: 0.0324 S12: 0.0263 S13: 0.2043 REMARK 3 S21: 0.0271 S22: -0.0415 S23: 0.0102 REMARK 3 S31: -0.2930 S32: -0.0096 S33: 0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6293 8.8049 -3.7583 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.1319 REMARK 3 T33: 0.1760 T12: -0.0031 REMARK 3 T13: -0.0120 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 1.0188 L22: 0.9185 REMARK 3 L33: 0.9616 L12: 0.1661 REMARK 3 L13: -0.0125 L23: 0.1700 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.0521 S13: 0.2189 REMARK 3 S21: 0.0265 S22: 0.0366 S23: 0.0172 REMARK 3 S31: -0.1794 S32: -0.0198 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6767 -4.0904 2.0125 REMARK 3 T TENSOR REMARK 3 T11: 0.1538 T22: 0.1904 REMARK 3 T33: 0.1813 T12: 0.0071 REMARK 3 T13: -0.0014 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.1560 L22: 0.8029 REMARK 3 L33: 0.2687 L12: 0.2530 REMARK 3 L13: -0.0980 L23: 0.3049 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.0456 S13: 0.0999 REMARK 3 S21: 0.0603 S22: -0.0609 S23: 0.1635 REMARK 3 S31: -0.0542 S32: -0.0273 S33: -0.0054 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55371 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.509 REMARK 200 RESOLUTION RANGE LOW (A) : 73.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: XIA2 REMARK 200 STARTING MODEL: 4UZQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULPHATE 0.1 M SODIUM REMARK 280 CITRATE PH 4.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.12950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.50050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.58250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.50050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.12950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.58250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 78 REMARK 465 THR A 79 REMARK 465 GLY A 80 REMARK 465 SER A 81 REMARK 465 ALA A 82 REMARK 465 GLN A 83 REMARK 465 GLN A 84 REMARK 465 LEU A 85 REMARK 465 ASN A 86 REMARK 465 GLU A 87 REMARK 465 ASP A 278 REMARK 465 CYS A 279 REMARK 465 VAL A 280 REMARK 465 ASP A 281 REMARK 465 THR A 282 REMARK 465 ILE A 283 REMARK 465 THR A 284 REMARK 465 CYS A 285 REMARK 465 THR A 352 REMARK 465 GLY A 353 REMARK 465 GLN A 354 REMARK 465 ASP A 420 REMARK 465 SER A 421 REMARK 465 HIS A 422 REMARK 465 LYS A 423 REMARK 465 ALA A 424 REMARK 465 SER A 425 REMARK 465 LYS A 426 REMARK 465 THR A 427 REMARK 465 GLY A 452 REMARK 465 THR A 453 REMARK 465 LYS A 454 REMARK 465 HIS A 455 REMARK 465 HIS A 456 REMARK 465 HIS A 457 REMARK 465 HIS A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 296 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 608 O HOH A 679 2.01 REMARK 500 O HOH A 693 O HOH A 702 2.16 REMARK 500 O HOH A 611 O HOH A 696 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 128 -143.71 58.58 REMARK 500 SER A 232 -117.60 58.92 REMARK 500 GLN A 311 -176.81 70.89 REMARK 500 PHE A 339 65.96 -119.61 REMARK 500 GLU A 390 155.09 71.04 REMARK 500 ILE A 391 -36.22 -153.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 6TR5 A 81 451 UNP Q6P988 NOTUM_HUMAN 81 451 SEQADV 6TR5 GLU A 78 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 THR A 79 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 GLY A 80 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 SER A 330 UNP Q6P988 CYS 330 ENGINEERED MUTATION SEQADV 6TR5 GLY A 452 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 THR A 453 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 LYS A 454 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 455 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 456 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 457 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 458 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 459 UNP Q6P988 EXPRESSION TAG SEQADV 6TR5 HIS A 460 UNP Q6P988 EXPRESSION TAG SEQRES 1 A 383 GLU THR GLY SER ALA GLN GLN LEU ASN GLU ASP LEU ARG SEQRES 2 A 383 LEU HIS LEU LEU LEU ASN THR SER VAL THR CYS ASN ASP SEQRES 3 A 383 GLY SER PRO ALA GLY TYR TYR LEU LYS GLU SER ARG GLY SEQRES 4 A 383 SER ARG ARG TRP LEU LEU PHE LEU GLU GLY GLY TRP TYR SEQRES 5 A 383 CYS PHE ASN ARG GLU ASN CYS ASP SER ARG TYR ASP THR SEQRES 6 A 383 MET ARG ARG LEU MET SER SER ARG ASP TRP PRO ARG THR SEQRES 7 A 383 ARG THR GLY THR GLY ILE LEU SER SER GLN PRO GLU GLU SEQRES 8 A 383 ASN PRO TYR TRP TRP ASN ALA ASN MET VAL PHE ILE PRO SEQRES 9 A 383 TYR CYS SER SER ASP VAL TRP SER GLY ALA SER SER LYS SEQRES 10 A 383 SER GLU LYS ASN GLU TYR ALA PHE MET GLY ALA LEU ILE SEQRES 11 A 383 ILE GLN GLU VAL VAL ARG GLU LEU LEU GLY ARG GLY LEU SEQRES 12 A 383 SER GLY ALA LYS VAL LEU LEU LEU ALA GLY SER SER ALA SEQRES 13 A 383 GLY GLY THR GLY VAL LEU LEU ASN VAL ASP ARG VAL ALA SEQRES 14 A 383 GLU GLN LEU GLU LYS LEU GLY TYR PRO ALA ILE GLN VAL SEQRES 15 A 383 ARG GLY LEU ALA ASP SER GLY TRP PHE LEU ASP ASN LYS SEQRES 16 A 383 GLN TYR ARG HIS THR ASP CYS VAL ASP THR ILE THR CYS SEQRES 17 A 383 ALA PRO THR GLU ALA ILE ARG ARG GLY ILE ARG TYR TRP SEQRES 18 A 383 ASN GLY VAL VAL PRO GLU ARG CYS ARG ARG GLN PHE GLN SEQRES 19 A 383 GLU GLY GLU GLU TRP ASN CYS PHE PHE GLY TYR LYS VAL SEQRES 20 A 383 TYR PRO THR LEU ARG SER PRO VAL PHE VAL VAL GLN TRP SEQRES 21 A 383 LEU PHE ASP GLU ALA GLN LEU THR VAL ASP ASN VAL HIS SEQRES 22 A 383 LEU THR GLY GLN PRO VAL GLN GLU GLY LEU ARG LEU TYR SEQRES 23 A 383 ILE GLN ASN LEU GLY ARG GLU LEU ARG HIS THR LEU LYS SEQRES 24 A 383 ASP VAL PRO ALA SER PHE ALA PRO ALA CYS LEU SER HIS SEQRES 25 A 383 GLU ILE ILE ILE ARG SER HIS TRP THR ASP VAL GLN VAL SEQRES 26 A 383 LYS GLY THR SER LEU PRO ARG ALA LEU HIS CYS TRP ASP SEQRES 27 A 383 ARG SER LEU HIS ASP SER HIS LYS ALA SER LYS THR PRO SEQRES 28 A 383 LEU LYS GLY CYS PRO VAL HIS LEU VAL ASP SER CYS PRO SEQRES 29 A 383 TRP PRO HIS CYS ASN PRO SER CYS PRO THR GLY THR LYS SEQRES 30 A 383 HIS HIS HIS HIS HIS HIS HET ML1 A 501 17 HET ML1 A 502 17 HET DMS A 503 4 HET NAG A 504 14 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 A 507 5 HET SO4 A 508 5 HET SO4 A 509 5 HET SO4 A 510 5 HET SO4 A 511 5 HET SO4 A 512 5 HETNAM ML1 N-[2-(5-METHOXY-1H-INDOL-3-YL)ETHYL]ACETAMIDE HETNAM DMS DIMETHYL SULFOXIDE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN ML1 MELATONIN HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 ML1 2(C13 H16 N2 O2) FORMUL 4 DMS C2 H6 O S FORMUL 5 NAG C8 H15 N O6 FORMUL 6 SO4 8(O4 S 2-) FORMUL 14 HOH *116(H2 O) HELIX 1 AA1 ASN A 132 MET A 143 1 12 HELIX 2 AA2 ARG A 144 MET A 147 5 4 HELIX 3 AA3 THR A 159 SER A 163 5 5 HELIX 4 AA4 MET A 203 GLY A 217 1 15 HELIX 5 AA5 ARG A 218 ALA A 223 5 6 HELIX 6 AA6 SER A 232 GLY A 253 1 22 HELIX 7 AA7 PRO A 287 ASN A 299 1 13 HELIX 8 AA8 PRO A 303 GLN A 311 1 9 HELIX 9 AA9 GLU A 314 PHE A 319 5 6 HELIX 10 AB1 PHE A 320 TYR A 325 1 6 HELIX 11 AB2 PRO A 326 LEU A 328 5 3 HELIX 12 AB3 GLU A 341 ASP A 347 1 7 HELIX 13 AB4 GLN A 357 LEU A 375 1 19 HELIX 14 AB5 LEU A 407 LEU A 418 1 12 SHEET 1 AA110 THR A 155 ARG A 156 0 SHEET 2 AA110 LEU A 89 LEU A 93 -1 N LEU A 89 O ARG A 156 SHEET 3 AA110 GLY A 108 LYS A 112 -1 O TYR A 109 N HIS A 92 SHEET 4 AA110 ASN A 176 ILE A 180 -1 O PHE A 179 N TYR A 110 SHEET 5 AA110 ARG A 119 LEU A 124 1 N PHE A 123 O ILE A 180 SHEET 6 AA110 VAL A 225 SER A 231 1 O LEU A 227 N TRP A 120 SHEET 7 AA110 GLN A 258 ASP A 264 1 O ARG A 260 N LEU A 228 SHEET 8 AA110 VAL A 332 VAL A 335 1 O VAL A 335 N ALA A 263 SHEET 9 AA110 SER A 381 ALA A 383 1 O PHE A 382 N VAL A 334 SHEET 10 AA110 HIS A 435 VAL A 437 1 O LEU A 436 N ALA A 383 SHEET 1 AA2 2 PHE A 339 ASP A 340 0 SHEET 2 AA2 2 LEU A 387 SER A 388 1 O SER A 388 N PHE A 339 SHEET 1 AA3 2 GLN A 401 VAL A 402 0 SHEET 2 AA3 2 THR A 405 SER A 406 -1 O THR A 405 N VAL A 402 SSBOND 1 CYS A 101 CYS A 183 1555 1555 2.03 SSBOND 2 CYS A 130 CYS A 136 1555 1555 2.04 SSBOND 3 CYS A 306 CYS A 318 1555 1555 2.07 SSBOND 4 CYS A 386 CYS A 449 1555 1555 2.02 SSBOND 5 CYS A 413 CYS A 432 1555 1555 2.03 SSBOND 6 CYS A 440 CYS A 445 1555 1555 2.04 LINK ND2 ASN A 96 C1 NAG A 504 1555 1555 1.43 CRYST1 60.259 73.165 79.001 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016595 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012658 0.00000