HEADER PHOTOSYNTHESIS 21-DEC-19 6TSY TITLE CYTOCHROME C6 FROM THERMOSYNECHOCOCCUS ELONGATUS IN A MONOCLINIC SPACE TITLE 2 GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C6; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: CYTOCHROME C-553,CYTOCHROME C553,SOLUBLE CYTOCHROME F SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS BP-1; SOURCE 3 ORGANISM_TAXID: 197221 KEYWDS CYANOBACTERIA, HEME, ELECTRON TRANSPORT, PHOTOSYSTEM I, KEYWDS 2 PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR C.G.FEILER,S.FALKE,I.SARROU REVDAT 4 24-JAN-24 6TSY 1 REMARK REVDAT 3 16-SEP-20 6TSY 1 JRNL REVDAT 2 09-SEP-20 6TSY 1 JRNL REVDAT 1 15-JAN-20 6TSY 0 JRNL AUTH S.FALKE,C.FEILER,H.CHAPMAN,I.SARROU JRNL TITL CRYSTAL STRUCTURES OF NATIVE CYTOCHROME C6FROM JRNL TITL 2 THERMOSYNECHOCOCCUS ELONGATUS IN TWO DIFFERENT SPACE GROUPS JRNL TITL 3 AND IMPLICATIONS FOR ITS OLIGOMERIZATION. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 444 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32880593 JRNL DOI 10.1107/S2053230X20010249 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 28283 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7600 - 4.8500 0.99 2827 149 0.1355 0.1827 REMARK 3 2 4.8500 - 3.8500 0.97 2717 144 0.1239 0.1789 REMARK 3 3 3.8500 - 3.3600 0.93 2647 139 0.1644 0.2411 REMARK 3 4 3.3600 - 3.0500 0.99 2746 145 0.1743 0.2585 REMARK 3 5 3.0500 - 2.8300 0.99 2801 147 0.2139 0.2689 REMARK 3 6 2.8300 - 2.6700 0.97 2705 142 0.2171 0.3096 REMARK 3 7 2.6700 - 2.5300 0.96 2693 142 0.2727 0.3678 REMARK 3 8 2.5300 - 2.4200 0.98 2742 145 0.2702 0.3426 REMARK 3 9 2.4200 - 2.3300 0.98 2716 143 0.2973 0.3252 REMARK 3 10 2.3300 - 2.2500 0.81 2274 119 0.4161 0.4406 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4195 REMARK 3 ANGLE : 1.269 5738 REMARK 3 CHIRALITY : 0.064 558 REMARK 3 PLANARITY : 0.007 735 REMARK 3 DIHEDRAL : 19.345 586 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TSY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292106016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28317 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 41.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4EIC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 40MM KNO3, PH 8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.00950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.95250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.00950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.95250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 328 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 112 REMARK 465 ALA C 111 REMARK 465 GLY C 112 REMARK 465 GLY D 112 REMARK 465 ALA E 111 REMARK 465 GLY E 112 REMARK 465 GLY F 112 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 332 O HOH B 318 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP E 92 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 48 105.39 -171.08 REMARK 500 LYS A 80 118.24 -163.88 REMARK 500 ASN A 81 -114.16 51.92 REMARK 500 HIS B 43 51.74 -103.43 REMARK 500 ASN B 48 111.14 -168.54 REMARK 500 LYS B 80 111.92 -161.84 REMARK 500 ASN B 81 -123.16 52.27 REMARK 500 LYS C 54 57.70 -100.83 REMARK 500 LYS C 80 107.69 -160.33 REMARK 500 ASN C 81 -121.83 63.89 REMARK 500 ASN D 48 97.52 -163.75 REMARK 500 LYS D 54 66.56 -104.77 REMARK 500 LYS D 80 106.32 -170.44 REMARK 500 ASN D 81 -117.68 53.24 REMARK 500 ASP E 27 91.77 -64.31 REMARK 500 ASN E 48 90.15 -162.32 REMARK 500 LYS E 54 61.12 -102.07 REMARK 500 LYS E 80 100.88 -162.80 REMARK 500 ASN E 81 -124.12 64.26 REMARK 500 ASN F 48 99.63 -160.60 REMARK 500 LYS F 54 67.05 -102.04 REMARK 500 LYS F 80 114.45 -161.08 REMARK 500 ASN F 81 -119.85 48.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 43 NE2 REMARK 620 2 HEC A 201 NA 92.7 REMARK 620 3 HEC A 201 NB 87.4 91.6 REMARK 620 4 HEC A 201 NC 93.3 173.8 87.0 REMARK 620 5 HEC A 201 ND 94.0 88.3 178.6 92.9 REMARK 620 6 MET A 83 SD 170.4 80.5 86.0 93.3 92.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 43 NE2 REMARK 620 2 HEC B 201 NA 85.6 REMARK 620 3 HEC B 201 NB 86.0 91.6 REMARK 620 4 HEC B 201 NC 95.2 177.4 86.0 REMARK 620 5 HEC B 201 ND 93.9 87.9 179.5 94.4 REMARK 620 6 MET B 83 SD 167.7 83.1 89.6 95.8 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 43 NE2 REMARK 620 2 HEC C 201 NA 89.6 REMARK 620 3 HEC C 201 NB 97.5 94.2 REMARK 620 4 HEC C 201 NC 87.1 175.3 89.6 REMARK 620 5 HEC C 201 ND 80.3 84.3 177.4 91.8 REMARK 620 6 MET C 83 SD 169.2 81.8 89.8 101.0 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 43 NE2 REMARK 620 2 HEC D 201 NA 87.5 REMARK 620 3 HEC D 201 NB 91.1 89.4 REMARK 620 4 HEC D 201 NC 88.8 175.6 88.4 REMARK 620 5 HEC D 201 ND 84.3 92.3 174.9 89.6 REMARK 620 6 MET D 83 SD 170.3 83.0 90.9 100.8 94.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC E 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 43 NE2 REMARK 620 2 HEC E 201 NA 81.8 REMARK 620 3 HEC E 201 NB 88.3 85.3 REMARK 620 4 HEC E 201 NC 92.0 173.6 93.0 REMARK 620 5 HEC E 201 ND 81.9 92.0 170.1 88.7 REMARK 620 6 MET E 83 SD 165.2 84.4 95.7 101.9 93.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC F 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS F 43 NE2 REMARK 620 2 HEC F 201 NA 97.1 REMARK 620 3 HEC F 201 NB 91.3 91.5 REMARK 620 4 HEC F 201 NC 89.5 173.1 90.1 REMARK 620 5 HEC F 201 ND 91.2 90.1 176.9 88.0 REMARK 620 6 MET F 83 SD 179.3 82.2 88.8 91.2 88.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC B 201 and CYS B REMARK 800 39 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC B 201 and CYS B REMARK 800 42 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC C 201 and CYS C REMARK 800 39 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC D 201 and CYS D REMARK 800 42 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC D 201 and CYS D REMARK 800 39 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC E 201 and CYS E REMARK 800 42 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC E 201 and CYS E REMARK 800 39 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC F 201 and CYS F REMARK 800 42 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HEC F 201 and CYS F REMARK 800 39 DBREF 6TSY A 26 112 UNP P0A3X9 CYC6_THEEB 26 112 DBREF 6TSY B 26 112 UNP P0A3X9 CYC6_THEEB 26 112 DBREF 6TSY C 26 112 UNP P0A3X9 CYC6_THEEB 26 112 DBREF 6TSY D 26 112 UNP P0A3X9 CYC6_THEEB 26 112 DBREF 6TSY E 26 112 UNP P0A3X9 CYC6_THEEB 26 112 DBREF 6TSY F 26 112 UNP P0A3X9 CYC6_THEEB 26 112 SEQRES 1 A 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 A 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 A 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 A 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 A 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 A 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 A 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY SEQRES 1 B 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 B 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 B 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 B 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 B 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 B 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 B 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY SEQRES 1 C 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 C 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 C 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 C 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 C 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 C 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 C 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY SEQRES 1 D 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 D 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 D 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 D 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 D 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 D 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 D 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY SEQRES 1 E 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 E 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 E 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 E 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 E 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 E 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 E 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY SEQRES 1 F 87 ALA ASP LEU ALA ASN GLY ALA LYS VAL PHE SER GLY ASN SEQRES 2 F 87 CYS ALA ALA CYS HIS MET GLY GLY GLY ASN VAL VAL MET SEQRES 3 F 87 ALA ASN LYS THR LEU LYS LYS GLU ALA LEU GLU GLN PHE SEQRES 4 F 87 GLY MET TYR SER GLU ASP ALA ILE ILE TYR GLN VAL GLN SEQRES 5 F 87 HIS GLY LYS ASN ALA MET PRO ALA PHE ALA GLY ARG LEU SEQRES 6 F 87 THR ASP GLU GLN ILE GLN ASP VAL ALA ALA TYR VAL LEU SEQRES 7 F 87 ASP GLN ALA ALA LYS GLY TRP ALA GLY HET HEC A 201 43 HET HEC B 201 43 HET HEC C 201 43 HET HEC D 201 43 HET HEC E 201 43 HET SO4 E 202 5 HET HEC F 201 43 HETNAM HEC HEME C HETNAM SO4 SULFATE ION FORMUL 7 HEC 6(C34 H34 FE N4 O4) FORMUL 12 SO4 O4 S 2- FORMUL 14 HOH *177(H2 O) HELIX 1 AA1 ASP A 27 CYS A 39 1 13 HELIX 2 AA2 CYS A 39 MET A 44 1 6 HELIX 3 AA3 GLY A 45 GLY A 47 5 3 HELIX 4 AA4 LYS A 57 PHE A 64 1 8 HELIX 5 AA5 SER A 68 GLY A 79 1 12 HELIX 6 AA6 THR A 91 LYS A 108 1 18 HELIX 7 AA7 ASP B 27 CYS B 39 1 13 HELIX 8 AA8 HIS B 43 GLY B 47 5 5 HELIX 9 AA9 LYS B 57 PHE B 64 1 8 HELIX 10 AB1 SER B 68 GLY B 79 1 12 HELIX 11 AB2 THR B 91 GLY B 109 1 19 HELIX 12 AB3 ASP C 27 CYS C 39 1 13 HELIX 13 AB4 CYS C 39 MET C 44 1 6 HELIX 14 AB5 GLY C 45 GLY C 47 5 3 HELIX 15 AB6 LYS C 57 PHE C 64 1 8 HELIX 16 AB7 SER C 68 GLY C 79 1 12 HELIX 17 AB8 THR C 91 GLY C 109 1 19 HELIX 18 AB9 ASP D 27 CYS D 39 1 13 HELIX 19 AC1 CYS D 39 MET D 44 1 6 HELIX 20 AC2 GLY D 45 GLY D 47 5 3 HELIX 21 AC3 LYS D 57 PHE D 64 1 8 HELIX 22 AC4 SER D 68 GLY D 79 1 12 HELIX 23 AC5 THR D 91 LYS D 108 1 18 HELIX 24 AC6 ASP E 27 CYS E 39 1 13 HELIX 25 AC7 CYS E 39 MET E 44 1 6 HELIX 26 AC8 GLY E 45 GLY E 47 5 3 HELIX 27 AC9 LYS E 57 PHE E 64 1 8 HELIX 28 AD1 SER E 68 GLY E 79 1 12 HELIX 29 AD2 THR E 91 LYS E 108 1 18 HELIX 30 AD3 ASP F 27 CYS F 39 1 13 HELIX 31 AD4 CYS F 39 MET F 44 1 6 HELIX 32 AD5 GLY F 45 GLY F 47 5 3 HELIX 33 AD6 LYS F 57 PHE F 64 1 8 HELIX 34 AD7 SER F 68 GLY F 79 1 12 HELIX 35 AD8 THR F 91 LYS F 108 1 18 LINK SG CYS A 39 CAB HEC A 201 1555 1555 1.77 LINK SG CYS A 42 CAC HEC A 201 1555 1555 1.73 LINK SG CYS B 39 CAB HEC B 201 1555 1555 1.78 LINK SG CYS B 42 CAC HEC B 201 1555 1555 1.77 LINK SG CYS C 39 CAB HEC C 201 1555 1555 1.77 LINK SG CYS D 39 CAB HEC D 201 1555 1555 1.77 LINK SG CYS D 42 CAC HEC D 201 1555 1555 1.78 LINK SG CYS E 39 CAB HEC E 201 1555 1555 1.59 LINK SG CYS E 42 CAC HEC E 201 1555 1555 1.77 LINK SG CYS F 39 CAB HEC F 201 1555 1555 1.77 LINK SG CYS F 42 CAC HEC F 201 1555 1555 1.77 LINK NE2 HIS A 43 FE HEC A 201 1555 1555 2.06 LINK SD MET A 83 FE HEC A 201 1555 1555 2.52 LINK NE2 HIS B 43 FE HEC B 201 1555 1555 2.07 LINK SD MET B 83 FE HEC B 201 1555 1555 2.35 LINK NE2 HIS C 43 FE HEC C 201 1555 1555 2.21 LINK SD MET C 83 FE HEC C 201 1555 1555 2.23 LINK NE2 HIS D 43 FE HEC D 201 1555 1555 2.05 LINK SD MET D 83 FE HEC D 201 1555 1555 2.40 LINK NE2 HIS E 43 FE HEC E 201 1555 1555 2.13 LINK SD MET E 83 FE HEC E 201 1555 1555 2.54 LINK NE2 HIS F 43 FE HEC F 201 1555 1555 2.02 LINK SD MET F 83 FE HEC F 201 1555 1555 2.33 SITE 1 AC1 23 ASN A 38 CYS A 39 CYS A 42 HIS A 43 SITE 2 AC1 23 ASN A 48 VAL A 50 MET A 51 LYS A 54 SITE 3 AC1 23 THR A 55 LEU A 56 LEU A 61 PHE A 64 SITE 4 AC1 23 GLN A 75 VAL A 76 LYS A 80 ASN A 81 SITE 5 AC1 23 MET A 83 PHE A 86 HOH A 301 HOH A 303 SITE 6 AC1 23 HOH A 307 HOH A 312 ALA D 82 SITE 1 AC2 3 LYS C 57 THR E 91 ASP E 92 SITE 1 AC3 23 PHE B 35 ASN B 38 ALA B 40 ALA B 41 SITE 2 AC3 23 CYS B 42 HIS B 43 ASN B 48 VAL B 50 SITE 3 AC3 23 MET B 51 LYS B 54 THR B 55 LEU B 56 SITE 4 AC3 23 LEU B 61 PHE B 64 MET B 66 GLN B 75 SITE 5 AC3 23 LYS B 80 ASN B 81 ALA B 82 MET B 83 SITE 6 AC3 23 PHE B 86 HOH B 305 HEC E 201 SITE 1 AC4 24 ASN B 38 CYS B 39 ALA B 40 ALA B 41 SITE 2 AC4 24 HIS B 43 MET B 44 ASN B 48 VAL B 49 SITE 3 AC4 24 VAL B 50 MET B 51 LYS B 54 THR B 55 SITE 4 AC4 24 LEU B 56 LEU B 61 PHE B 64 MET B 66 SITE 5 AC4 24 GLN B 75 LYS B 80 ASN B 81 ALA B 82 SITE 6 AC4 24 MET B 83 PHE B 86 HOH B 305 HEC E 201 SITE 1 AC5 26 PHE C 35 ASN C 38 ALA C 40 ALA C 41 SITE 2 AC5 26 CYS C 42 HIS C 43 ASN C 48 VAL C 50 SITE 3 AC5 26 MET C 51 LYS C 54 THR C 55 LEU C 56 SITE 4 AC5 26 LEU C 61 PHE C 64 MET C 66 ILE C 72 SITE 5 AC5 26 GLN C 75 VAL C 76 LYS C 80 ASN C 81 SITE 6 AC5 26 MET C 83 PRO C 84 HOH C 304 HOH C 310 SITE 7 AC5 26 HOH C 315 ALA F 82 SITE 1 AC6 23 ALA A 82 ASN D 38 CYS D 39 ALA D 40 SITE 2 AC6 23 ALA D 41 HIS D 43 MET D 44 ASN D 48 SITE 3 AC6 23 VAL D 49 LYS D 54 THR D 55 LEU D 56 SITE 4 AC6 23 PHE D 64 MET D 66 GLN D 75 VAL D 76 SITE 5 AC6 23 ASN D 81 MET D 83 PRO D 84 PHE D 86 SITE 6 AC6 23 HOH D 301 HOH D 307 HOH D 308 SITE 1 AC7 22 ALA A 82 PHE D 35 ASN D 38 ALA D 40 SITE 2 AC7 22 ALA D 41 CYS D 42 HIS D 43 ASN D 48 SITE 3 AC7 22 LYS D 54 THR D 55 LEU D 56 PHE D 64 SITE 4 AC7 22 MET D 66 GLN D 75 VAL D 76 ASN D 81 SITE 5 AC7 22 MET D 83 PRO D 84 PHE D 86 HOH D 301 SITE 6 AC7 22 HOH D 307 HOH D 308 SITE 1 AC8 23 HEC B 201 ASN E 38 CYS E 39 ALA E 40 SITE 2 AC8 23 ALA E 41 HIS E 43 MET E 44 ASN E 48 SITE 3 AC8 23 VAL E 49 VAL E 50 MET E 51 LYS E 54 SITE 4 AC8 23 THR E 55 LEU E 56 LEU E 61 PHE E 64 SITE 5 AC8 23 MET E 66 GLN E 75 VAL E 76 LYS E 80 SITE 6 AC8 23 ASN E 81 ALA E 82 MET E 83 SITE 1 AC9 22 HEC B 201 PHE E 35 ASN E 38 ALA E 40 SITE 2 AC9 22 ALA E 41 CYS E 42 HIS E 43 ASN E 48 SITE 3 AC9 22 VAL E 50 MET E 51 LYS E 54 THR E 55 SITE 4 AC9 22 LEU E 56 LEU E 61 PHE E 64 MET E 66 SITE 5 AC9 22 GLN E 75 VAL E 76 LYS E 80 ASN E 81 SITE 6 AC9 22 ALA E 82 MET E 83 SITE 1 AD1 24 ALA C 82 ASN F 38 CYS F 39 ALA F 40 SITE 2 AD1 24 ALA F 41 HIS F 43 MET F 44 ASN F 48 SITE 3 AD1 24 VAL F 49 MET F 51 LYS F 54 THR F 55 SITE 4 AD1 24 LEU F 56 ALA F 60 PHE F 64 GLN F 75 SITE 5 AD1 24 VAL F 76 LYS F 80 ASN F 81 MET F 83 SITE 6 AD1 24 PHE F 86 HOH F 302 HOH F 305 HOH F 319 SITE 1 AD2 23 ALA C 82 PHE F 35 ASN F 38 ALA F 40 SITE 2 AD2 23 ALA F 41 CYS F 42 HIS F 43 ASN F 48 SITE 3 AD2 23 MET F 51 LYS F 54 THR F 55 LEU F 56 SITE 4 AD2 23 ALA F 60 PHE F 64 GLN F 75 VAL F 76 SITE 5 AD2 23 LYS F 80 ASN F 81 MET F 83 PHE F 86 SITE 6 AD2 23 HOH F 302 HOH F 305 HOH F 319 CRYST1 106.019 109.905 55.402 90.00 100.89 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009432 0.000000 0.001816 0.00000 SCALE2 0.000000 0.009099 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018381 0.00000