HEADER SIGNALING PROTEIN 30-DEC-19 6TTS TITLE CRYSTAL STRUCTURE OF THE GGDEF DOMAIN OF DGCB FROM CAULOBACTER TITLE 2 CRESCENTUS IN COMPLEX WITH C-DI-GMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GGDEF DIGUANYLATE CYCLASE DGCB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES (STRAIN NA1000 / CB15N); SOURCE 3 ORGANISM_TAXID: 565050; SOURCE 4 GENE: DGCB, CCNA_01926; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GGDEF, C-DI-GMP, CYCLIC DI-GMP, CAULOBACTER, DGCB, DIGUANYLATE KEYWDS 2 CYCLASE, DGC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.HOLZSCHUH,T.SCHIRMER,R.TEIXEIRA REVDAT 2 24-JAN-24 6TTS 1 REMARK REVDAT 1 13-JAN-21 6TTS 0 JRNL AUTH F.HOLZSCHUH,T.SCHIRMER,R.TEIXEIRA JRNL TITL CRYSTAL STRUCTURE OF THE GGDEF DOMAIN OF DGCB FROM JRNL TITL 2 CAULOBACTER CRESCENTUS IN COMPLEX WITH C-DI-GMP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.280 REMARK 3 FREE R VALUE TEST SET COUNT : 1002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.7600 - 4.7800 1.00 2781 157 0.1781 0.2119 REMARK 3 2 4.7800 - 3.8000 1.00 2586 144 0.1653 0.2291 REMARK 3 3 3.8000 - 3.3200 1.00 2586 142 0.1906 0.2237 REMARK 3 4 3.3200 - 3.0100 1.00 2525 146 0.2300 0.3206 REMARK 3 5 3.0100 - 2.8000 1.00 2520 136 0.2464 0.3338 REMARK 3 6 2.8000 - 2.6300 1.00 2520 129 0.2523 0.3009 REMARK 3 7 2.6300 - 2.5000 0.99 2454 148 0.2653 0.3418 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.313 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2967 REMARK 3 ANGLE : 1.359 4061 REMARK 3 CHIRALITY : 0.066 438 REMARK 3 PLANARITY : 0.006 496 REMARK 3 DIHEDRAL : 26.927 1101 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TTS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97947 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.2.2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19045 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 64.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.15900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.51500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 3IGN, 3HVA, 3QYY, 3I5C, 4WXW, 3TVK, 4URG, 4ZVF, REMARK 200 4H54, 4ZMM, 3ICL, 4IOB, 5EUH, 3EZU, 4YME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LISO4, 0.1 M NAACET PH 5.5, 8% REMARK 280 W/V PEG 20K, 8% V/V PEG 500 MME, 500 UM C-DI-GMP, 1 MM GTP, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.38000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.69000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 185.07000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.38000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 185.07000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.69000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 155 REMARK 465 GLY A 156 REMARK 465 SER A 157 REMARK 465 SER A 158 REMARK 465 HIS A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 SER A 165 REMARK 465 SER A 166 REMARK 465 GLY A 167 REMARK 465 LEU A 168 REMARK 465 VAL A 169 REMARK 465 PRO A 170 REMARK 465 ARG A 171 REMARK 465 GLY A 172 REMARK 465 SER A 173 REMARK 465 MET A 175 REMARK 465 MET A 346 REMARK 465 PRO A 347 REMARK 465 GLY A 348 REMARK 465 ALA A 349 REMARK 465 ALA A 350 REMARK 465 ASN A 351 REMARK 465 ALA A 352 REMARK 465 ALA A 353 REMARK 465 MET B 155 REMARK 465 GLY B 156 REMARK 465 SER B 157 REMARK 465 SER B 158 REMARK 465 HIS B 159 REMARK 465 HIS B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 SER B 165 REMARK 465 SER B 166 REMARK 465 GLY B 167 REMARK 465 LEU B 168 REMARK 465 VAL B 169 REMARK 465 MET B 346 REMARK 465 PRO B 347 REMARK 465 GLY B 348 REMARK 465 ALA B 349 REMARK 465 ALA B 350 REMARK 465 ASN B 351 REMARK 465 ALA B 352 REMARK 465 ALA B 353 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 337 173.54 63.61 REMARK 500 ARG B 337 177.34 68.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E B 404 DBREF1 6TTS A 176 353 UNP A0A0H3CAN8_CAUVN DBREF2 6TTS A A0A0H3CAN8 176 353 DBREF1 6TTS B 176 353 UNP A0A0H3CAN8_CAUVN DBREF2 6TTS B A0A0H3CAN8 176 353 SEQADV 6TTS MET A 155 UNP A0A0H3CAN INITIATING METHIONINE SEQADV 6TTS GLY A 156 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER A 157 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER A 158 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 159 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 160 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 161 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 162 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 163 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 164 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER A 165 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER A 166 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS GLY A 167 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS LEU A 168 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS VAL A 169 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS PRO A 170 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS ARG A 171 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS GLY A 172 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER A 173 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS A 174 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS MET A 175 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS MET B 155 UNP A0A0H3CAN INITIATING METHIONINE SEQADV 6TTS GLY B 156 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER B 157 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER B 158 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 159 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 160 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 161 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 162 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 163 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 164 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER B 165 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER B 166 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS GLY B 167 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS LEU B 168 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS VAL B 169 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS PRO B 170 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS ARG B 171 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS GLY B 172 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS SER B 173 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS HIS B 174 UNP A0A0H3CAN EXPRESSION TAG SEQADV 6TTS MET B 175 UNP A0A0H3CAN EXPRESSION TAG SEQRES 1 A 199 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 199 LEU VAL PRO ARG GLY SER HIS MET VAL ARG ARG ASP ALA SEQRES 3 A 199 THR THR ASP GLY LEU THR ASN LEU ALA ASN ARG LYS ALA SEQRES 4 A 199 PHE ASP ASP GLU LEU ASP ARG ALA CYS ALA GLU ALA GLU SEQRES 5 A 199 GLU GLY GLY THR THR ILE CYS LEU ALA VAL LEU ASP ILE SEQRES 6 A 199 ASP HIS PHE LYS GLY PHE ASN ASP THR TRP GLY HIS GLN SEQRES 7 A 199 THR GLY ASP GLN VAL ILE ARG TYR VAL ALA SER VAL ILE SEQRES 8 A 199 GLY ARG VAL ALA ALA PRO PRO ARG PHE ALA ALA ARG TYR SEQRES 9 A 199 GLY GLY GLU GLU PHE ALA MET ILE PHE PRO ARG GLU ALA SEQRES 10 A 199 ALA SER VAL VAL ALA THR THR LEU GLU GLU ILE ARG VAL SEQRES 11 A 199 GLU VAL SER SER ARG MET LEU LYS ARG ARG SER THR ASN SEQRES 12 A 199 GLU ASP LEU GLY ALA ILE THR VAL SER SER GLY PHE ALA SEQRES 13 A 199 GLU ARG LYS PRO GLY GLU SER GLY HIS SER VAL MET GLU SEQRES 14 A 199 ARG ALA ASP ALA ALA LEU TYR ALA SER LYS ARG GLY GLY SEQRES 15 A 199 ARG ASN ARG VAL THR ALA ALA GLU SER MET PRO GLY ALA SEQRES 16 A 199 ALA ASN ALA ALA SEQRES 1 B 199 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 199 LEU VAL PRO ARG GLY SER HIS MET VAL ARG ARG ASP ALA SEQRES 3 B 199 THR THR ASP GLY LEU THR ASN LEU ALA ASN ARG LYS ALA SEQRES 4 B 199 PHE ASP ASP GLU LEU ASP ARG ALA CYS ALA GLU ALA GLU SEQRES 5 B 199 GLU GLY GLY THR THR ILE CYS LEU ALA VAL LEU ASP ILE SEQRES 6 B 199 ASP HIS PHE LYS GLY PHE ASN ASP THR TRP GLY HIS GLN SEQRES 7 B 199 THR GLY ASP GLN VAL ILE ARG TYR VAL ALA SER VAL ILE SEQRES 8 B 199 GLY ARG VAL ALA ALA PRO PRO ARG PHE ALA ALA ARG TYR SEQRES 9 B 199 GLY GLY GLU GLU PHE ALA MET ILE PHE PRO ARG GLU ALA SEQRES 10 B 199 ALA SER VAL VAL ALA THR THR LEU GLU GLU ILE ARG VAL SEQRES 11 B 199 GLU VAL SER SER ARG MET LEU LYS ARG ARG SER THR ASN SEQRES 12 B 199 GLU ASP LEU GLY ALA ILE THR VAL SER SER GLY PHE ALA SEQRES 13 B 199 GLU ARG LYS PRO GLY GLU SER GLY HIS SER VAL MET GLU SEQRES 14 B 199 ARG ALA ASP ALA ALA LEU TYR ALA SER LYS ARG GLY GLY SEQRES 15 B 199 ARG ASN ARG VAL THR ALA ALA GLU SER MET PRO GLY ALA SEQRES 16 B 199 ALA ASN ALA ALA HET C2E A 401 46 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET C2E A 405 46 HET C2E A 406 46 HET C2E A 407 46 HET SO4 B 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HET C2E B 404 46 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM SO4 SULFATE ION HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 C2E 5(C20 H24 N10 O14 P2) FORMUL 4 SO4 6(O4 S 2-) FORMUL 14 HOH *16(H2 O) HELIX 1 AA1 ASN A 190 GLY A 208 1 19 HELIX 2 AA2 HIS A 221 GLY A 230 1 10 HELIX 3 AA3 GLY A 230 ARG A 247 1 18 HELIX 4 AA4 ALA A 271 SER A 287 1 17 HELIX 5 AA5 SER A 317 GLY A 336 1 20 HELIX 6 AA6 ASN B 190 GLY B 209 1 20 HELIX 7 AA7 HIS B 221 GLY B 230 1 10 HELIX 8 AA8 GLY B 230 VAL B 248 1 19 HELIX 9 AA9 ALA B 271 SER B 287 1 17 HELIX 10 AB1 SER B 317 GLY B 335 1 19 SHEET 1 AA1 5 PHE A 254 ARG A 257 0 SHEET 2 AA1 5 GLU A 262 PRO A 268 -1 O ALA A 264 N ALA A 256 SHEET 3 AA1 5 ILE A 212 ILE A 219 -1 N CYS A 213 O PHE A 267 SHEET 4 AA1 5 VAL A 305 GLU A 311 -1 O GLY A 308 N VAL A 216 SHEET 5 AA1 5 VAL A 340 ALA A 342 1 O THR A 341 N PHE A 309 SHEET 1 AA2 5 PHE B 254 ARG B 257 0 SHEET 2 AA2 5 GLU B 262 PRO B 268 -1 O ILE B 266 N PHE B 254 SHEET 3 AA2 5 ILE B 212 ILE B 219 -1 N CYS B 213 O PHE B 267 SHEET 4 AA2 5 VAL B 305 GLU B 311 -1 O SER B 306 N ASP B 218 SHEET 5 AA2 5 VAL B 340 ALA B 342 1 O THR B 341 N SER B 307 SHEET 1 AA3 2 LEU B 291 LYS B 292 0 SHEET 2 AA3 2 ASP B 299 GLY B 301 -1 O LEU B 300 N LEU B 291 CISPEP 1 PRO A 251 PRO A 252 0 6.29 CISPEP 2 PRO B 251 PRO B 252 0 11.01 SITE 1 AC1 14 PHE A 222 LYS A 223 ASN A 226 HIS A 231 SITE 2 AC1 14 GLY A 234 ASP A 235 ILE A 238 ARG A 257 SITE 3 AC1 14 ASN B 226 HIS B 231 GLY B 234 ASP B 235 SITE 4 AC1 14 ILE B 238 ARG B 257 SITE 1 AC2 4 HIS A 221 PHE A 222 LYS A 223 GLY A 224 SITE 1 AC3 5 THR A 233 GLN A 236 ARG A 293 SER A 295 SITE 2 AC3 5 LYS B 192 SITE 1 AC4 3 ARG A 293 ARG A 334 LYS B 192 SITE 1 AC5 14 GLN A 236 ARG A 239 TYR A 240 SER A 243 SITE 2 AC5 14 ARG A 289 LEU A 291 LYS A 292 ARG A 294 SITE 3 AC5 14 C2E A 406 HIS B 174 MET B 175 VAL B 176 SITE 4 AC5 14 ARG B 177 ARG B 178 SITE 1 AC6 9 ARG A 289 LYS A 292 ARG A 294 ASN A 297 SITE 2 AC6 9 C2E A 405 SER B 173 HIS B 174 VAL B 176 SITE 3 AC6 9 ARG B 177 SITE 1 AC7 16 HIS A 174 VAL A 176 ARG A 177 ARG A 178 SITE 2 AC7 16 HOH A 502 GLN B 236 ARG B 239 TYR B 240 SITE 3 AC7 16 SER B 243 ARG B 247 ARG B 289 LEU B 291 SITE 4 AC7 16 LYS B 292 ARG B 294 SO4 B 401 C2E B 404 SITE 1 AC8 7 C2E A 407 GLN B 232 THR B 233 GLN B 236 SITE 2 AC8 7 ARG B 293 ARG B 294 SER B 295 SITE 1 AC9 4 HIS B 221 PHE B 222 LYS B 223 GLY B 224 SITE 1 AD1 3 LYS A 192 ARG B 293 ARG B 334 SITE 1 AD2 6 HIS A 174 ARG A 177 C2E A 407 ARG B 289 SITE 2 AD2 6 LYS B 292 ARG B 294 CRYST1 64.500 64.500 246.760 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004053 0.00000