HEADER HYDROLASE 15-JAN-20 6TY6 TITLE VARIANT W229D/F290W-2 OF THE LAST COMMON ANCESTOR OF GRAM-NEGATIVE TITLE 2 BACTERIA BETA-LACTAMASE CLASS A (GNCA4) BOUND TO 5(6)- TITLE 3 NITROBENZOTRIAZOLE (TS-ANALOG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA LACTAMASE (GNCA4-2); COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: 6NT IS THE INHIBITOR ANALOG AND GOL, FMT AND ACT ARE COMPND 7 CRYSTALLIZATION COCKTAIL COMPONENTS. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-24B(+) KEYWDS HYDROLASE, ANTIBIOTIC RESISTANCE, ANCESTRAL RECONSTRUCTED EXPDTA X-RAY DIFFRACTION AUTHOR J.A.GAVIRA,V.RISSO,J.M.SANCHEZ-RUIZ,A.ROMERO-RIVERA,S.C.L.KAMERLIN, AUTHOR 2 M.ORTEGA-MUNOZ,F.SANTOYO-GONZALEZ REVDAT 3 24-JAN-24 6TY6 1 REMARK REVDAT 2 16-SEP-20 6TY6 1 JRNL REVDAT 1 03-JUN-20 6TY6 0 JRNL AUTH V.A.RISSO,A.ROMERO-RIVERA,L.I.GUTIERREZ-RUS,M.ORTEGA-MUNOZ, JRNL AUTH 2 F.SANTOYO-GONZALEZ,J.A.GAVIRA,J.M.SANCHEZ-RUIZ, JRNL AUTH 3 S.C.L.KAMERLIN JRNL TITL ENHANCING ADE NOVOENZYME ACTIVITY BY COMPUTATIONALLY-FOCUSED JRNL TITL 2 ULTRA-LOW-THROUGHPUT SCREENING. JRNL REF CHEM SCI V. 11 6134 2020 JRNL REFN ISSN 2041-6520 JRNL PMID 32832059 JRNL DOI 10.1039/D0SC01935F REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 130626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 6624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4800 - 5.5900 0.98 4370 227 0.1778 0.2010 REMARK 3 2 5.5900 - 4.4400 0.97 4196 231 0.1425 0.1586 REMARK 3 3 4.4400 - 3.8800 0.95 4060 214 0.1431 0.1686 REMARK 3 4 3.8800 - 3.5200 0.95 4041 196 0.1564 0.1710 REMARK 3 5 3.5200 - 3.2700 0.96 4055 221 0.1794 0.2052 REMARK 3 6 3.2700 - 3.0800 0.96 4094 208 0.2037 0.2291 REMARK 3 7 3.0800 - 2.9200 0.97 4048 223 0.2203 0.2734 REMARK 3 8 2.9200 - 2.8000 0.97 4059 228 0.2305 0.2720 REMARK 3 9 2.8000 - 2.6900 0.98 4131 211 0.2271 0.2516 REMARK 3 10 2.6900 - 2.6000 0.98 4117 217 0.2243 0.2368 REMARK 3 11 2.6000 - 2.5100 0.99 4144 219 0.2170 0.2595 REMARK 3 12 2.5100 - 2.4400 0.99 4123 217 0.2256 0.2360 REMARK 3 13 2.4400 - 2.3800 0.99 4143 241 0.2217 0.2758 REMARK 3 14 2.3800 - 2.3200 0.99 4129 232 0.2259 0.2611 REMARK 3 15 2.3200 - 2.2700 0.99 4173 231 0.2200 0.2589 REMARK 3 16 2.2700 - 2.2200 1.00 4155 226 0.2264 0.2808 REMARK 3 17 2.2200 - 2.1800 0.99 4141 204 0.2244 0.2718 REMARK 3 18 2.1800 - 2.1300 0.99 4131 231 0.2392 0.2863 REMARK 3 19 2.1300 - 2.1000 0.99 4153 213 0.2414 0.2590 REMARK 3 20 2.1000 - 2.0600 1.00 4118 220 0.2430 0.2428 REMARK 3 21 2.0600 - 2.0300 1.00 4210 227 0.2386 0.2628 REMARK 3 22 2.0300 - 2.0000 0.99 4124 201 0.2385 0.2620 REMARK 3 23 2.0000 - 1.9700 1.00 4186 207 0.2457 0.2996 REMARK 3 24 1.9700 - 1.9400 1.00 4151 229 0.2564 0.2897 REMARK 3 25 1.9400 - 1.9100 1.00 4093 218 0.2613 0.2815 REMARK 3 26 1.9100 - 1.8900 1.00 4172 226 0.2735 0.2796 REMARK 3 27 1.8900 - 1.8600 1.00 4095 236 0.3040 0.3220 REMARK 3 28 1.8600 - 1.8400 0.99 4144 219 0.3286 0.3608 REMARK 3 29 1.8400 - 1.8200 0.99 4105 230 0.3820 0.3976 REMARK 3 30 1.8200 - 1.8000 0.99 4141 221 0.4209 0.4537 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.261 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.954 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 6816 REMARK 3 ANGLE : 1.439 9295 REMARK 3 CHIRALITY : 0.102 1038 REMARK 3 PLANARITY : 0.010 1259 REMARK 3 DIHEDRAL : 9.427 5288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4148 -5.2588 38.7006 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.2494 REMARK 3 T33: 0.2780 T12: -0.0416 REMARK 3 T13: -0.0005 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.3206 L22: 2.7268 REMARK 3 L33: 2.2714 L12: -0.1352 REMARK 3 L13: 0.1122 L23: 0.4599 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: 0.0890 S13: -0.1274 REMARK 3 S21: -0.4901 S22: -0.0036 S23: -0.0369 REMARK 3 S31: 0.5478 S32: 0.0047 S33: -0.0118 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9692 17.7005 51.8267 REMARK 3 T TENSOR REMARK 3 T11: 0.1977 T22: 0.2529 REMARK 3 T33: 0.2728 T12: 0.0031 REMARK 3 T13: 0.0138 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.7972 L22: 2.0486 REMARK 3 L33: 1.7244 L12: -0.1098 REMARK 3 L13: -0.1968 L23: 0.6276 REMARK 3 S TENSOR REMARK 3 S11: -0.0231 S12: -0.0558 S13: 0.0216 REMARK 3 S21: -0.0582 S22: -0.0030 S23: 0.1422 REMARK 3 S31: -0.0030 S32: -0.1418 S33: -0.0017 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0410 4.0377 57.1418 REMARK 3 T TENSOR REMARK 3 T11: 0.1873 T22: 0.2550 REMARK 3 T33: 0.2524 T12: 0.0304 REMARK 3 T13: 0.0208 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.4687 L22: 3.1029 REMARK 3 L33: 1.9020 L12: -0.2622 REMARK 3 L13: 0.2708 L23: 0.4357 REMARK 3 S TENSOR REMARK 3 S11: -0.0985 S12: -0.0314 S13: -0.0836 REMARK 3 S21: 0.1697 S22: 0.1594 S23: -0.0142 REMARK 3 S31: 0.2506 S32: -0.0336 S33: -0.0130 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8848 -0.7739 47.4559 REMARK 3 T TENSOR REMARK 3 T11: 0.2527 T22: 0.2389 REMARK 3 T33: 0.3085 T12: -0.0384 REMARK 3 T13: 0.0268 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 1.7744 L22: 2.4958 REMARK 3 L33: 2.7459 L12: -0.1931 REMARK 3 L13: 0.4172 L23: -0.3168 REMARK 3 S TENSOR REMARK 3 S11: -0.1954 S12: -0.0685 S13: -0.0732 REMARK 3 S21: -0.0943 S22: 0.0875 S23: 0.1526 REMARK 3 S31: 0.0509 S32: -0.2633 S33: 0.0106 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4437 -10.5014 47.4319 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.2109 REMARK 3 T33: 0.2739 T12: -0.0814 REMARK 3 T13: 0.0283 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 1.6641 L22: 4.0409 REMARK 3 L33: 4.1093 L12: 0.7624 REMARK 3 L13: 0.1105 L23: -0.2080 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: 0.2194 S13: -0.5060 REMARK 3 S21: -0.2920 S22: -0.0949 S23: 0.0150 REMARK 3 S31: 0.4503 S32: 0.1374 S33: 0.0228 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8856 43.6256 66.7832 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.3475 REMARK 3 T33: 0.2932 T12: 0.0814 REMARK 3 T13: 0.0365 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 0.5912 L22: 1.0881 REMARK 3 L33: 1.4223 L12: 0.2560 REMARK 3 L13: 0.3416 L23: -0.1312 REMARK 3 S TENSOR REMARK 3 S11: 0.0330 S12: -0.2907 S13: 0.0367 REMARK 3 S21: 0.1671 S22: -0.0513 S23: 0.1477 REMARK 3 S31: -0.1087 S32: -0.3053 S33: -0.0179 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2414 45.1359 39.7340 REMARK 3 T TENSOR REMARK 3 T11: 0.4353 T22: 0.3269 REMARK 3 T33: 0.3407 T12: 0.0006 REMARK 3 T13: 0.0817 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.7732 L22: 0.9623 REMARK 3 L33: 0.9760 L12: 0.0878 REMARK 3 L13: -0.7671 L23: 0.2796 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: 0.0490 S13: 0.0834 REMARK 3 S21: -0.3651 S22: 0.0792 S23: -0.2381 REMARK 3 S31: -0.4042 S32: 0.2221 S33: 0.0335 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8653 52.4021 31.6786 REMARK 3 T TENSOR REMARK 3 T11: 0.6730 T22: 0.4154 REMARK 3 T33: 0.3625 T12: 0.1032 REMARK 3 T13: 0.0279 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 0.1670 L22: 0.4216 REMARK 3 L33: 0.3788 L12: 0.0524 REMARK 3 L13: -0.0986 L23: -0.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.1175 S12: 0.2780 S13: 0.1479 REMARK 3 S21: -0.5745 S22: -0.0832 S23: 0.2609 REMARK 3 S31: -0.7269 S32: -0.3961 S33: -0.3872 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8565 46.4398 51.0161 REMARK 3 T TENSOR REMARK 3 T11: 0.2586 T22: 0.2594 REMARK 3 T33: 0.2560 T12: 0.0280 REMARK 3 T13: 0.0222 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.8424 L22: 1.3519 REMARK 3 L33: 1.1052 L12: -0.2614 REMARK 3 L13: -0.5155 L23: 0.4305 REMARK 3 S TENSOR REMARK 3 S11: 0.0403 S12: -0.0173 S13: 0.1266 REMARK 3 S21: -0.2458 S22: 0.0557 S23: -0.0900 REMARK 3 S31: -0.2392 S32: -0.0543 S33: -0.0392 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 259 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9552 46.9358 58.4297 REMARK 3 T TENSOR REMARK 3 T11: 0.2399 T22: 0.4204 REMARK 3 T33: 0.3806 T12: 0.0880 REMARK 3 T13: -0.0093 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.0946 L22: 0.2935 REMARK 3 L33: 0.3084 L12: -0.0743 REMARK 3 L13: -0.1359 L23: 0.0049 REMARK 3 S TENSOR REMARK 3 S11: -0.2032 S12: 0.3379 S13: 0.2046 REMARK 3 S21: -0.1648 S22: 0.0832 S23: 0.2375 REMARK 3 S31: -0.1529 S32: -0.2479 S33: -0.0733 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 272 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8788 53.8667 67.6772 REMARK 3 T TENSOR REMARK 3 T11: 0.2919 T22: 0.3684 REMARK 3 T33: 0.3257 T12: 0.0822 REMARK 3 T13: 0.0581 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 3.7094 L22: 4.0762 REMARK 3 L33: 2.5574 L12: 0.5291 REMARK 3 L13: 2.1830 L23: 0.2109 REMARK 3 S TENSOR REMARK 3 S11: 0.1587 S12: -0.1471 S13: 0.4706 REMARK 3 S21: 0.1830 S22: -0.2195 S23: -0.1367 REMARK 3 S31: 0.1457 S32: -0.0807 S33: 0.0164 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 27 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8795 48.3393 5.4193 REMARK 3 T TENSOR REMARK 3 T11: 0.9272 T22: 0.4372 REMARK 3 T33: 0.3483 T12: 0.1397 REMARK 3 T13: 0.1159 T23: 0.1234 REMARK 3 L TENSOR REMARK 3 L11: 2.7363 L22: 2.9753 REMARK 3 L33: 3.8957 L12: -0.0293 REMARK 3 L13: -1.6889 L23: -0.8229 REMARK 3 S TENSOR REMARK 3 S11: 0.0375 S12: 0.4361 S13: 0.4457 REMARK 3 S21: -0.2885 S22: 0.1897 S23: -0.0966 REMARK 3 S31: -0.3704 S32: -0.0353 S33: 0.4313 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 41 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5019 43.2693 17.0461 REMARK 3 T TENSOR REMARK 3 T11: 0.6660 T22: 0.4390 REMARK 3 T33: 0.2972 T12: 0.0119 REMARK 3 T13: 0.1382 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.2382 L22: 1.5273 REMARK 3 L33: 0.8531 L12: 0.3596 REMARK 3 L13: -0.4009 L23: -0.5550 REMARK 3 S TENSOR REMARK 3 S11: 0.1158 S12: -0.0258 S13: 0.0165 REMARK 3 S21: -0.1216 S22: 0.0481 S23: -0.2836 REMARK 3 S31: -0.6133 S32: 0.2125 S33: 0.1662 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 69 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0797 14.2346 25.0484 REMARK 3 T TENSOR REMARK 3 T11: 0.5278 T22: 0.3266 REMARK 3 T33: 0.3214 T12: -0.0111 REMARK 3 T13: 0.0648 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.3808 L22: 1.1889 REMARK 3 L33: 0.5111 L12: -0.1427 REMARK 3 L13: -0.3707 L23: -0.3023 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0658 S13: -0.1642 REMARK 3 S21: -0.4549 S22: -0.0288 S23: 0.0631 REMARK 3 S31: 0.2038 S32: -0.1818 S33: -0.0541 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 119 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2518 25.7204 26.3879 REMARK 3 T TENSOR REMARK 3 T11: 0.4726 T22: 0.3542 REMARK 3 T33: 0.2895 T12: 0.0111 REMARK 3 T13: 0.0528 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3049 L22: 0.6472 REMARK 3 L33: 0.3570 L12: 0.0551 REMARK 3 L13: -0.2277 L23: -0.0443 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.1025 S13: -0.0088 REMARK 3 S21: -0.4412 S22: -0.0125 S23: 0.0276 REMARK 3 S31: -0.0288 S32: -0.1815 S33: -0.0275 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 180 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2002 28.7851 16.4070 REMARK 3 T TENSOR REMARK 3 T11: 0.6065 T22: 0.3773 REMARK 3 T33: 0.3274 T12: -0.0078 REMARK 3 T13: 0.1265 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.3341 L22: 0.5539 REMARK 3 L33: 0.8191 L12: -0.2357 REMARK 3 L13: -0.3591 L23: -0.2443 REMARK 3 S TENSOR REMARK 3 S11: 0.0687 S12: 0.0433 S13: -0.0348 REMARK 3 S21: -0.4563 S22: -0.0164 S23: -0.1871 REMARK 3 S31: -0.0729 S32: 0.2195 S33: -0.0088 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 240 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1338 33.3070 12.3743 REMARK 3 T TENSOR REMARK 3 T11: 0.7266 T22: 0.4467 REMARK 3 T33: 0.3474 T12: 0.0037 REMARK 3 T13: 0.1208 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.3128 L22: 0.8789 REMARK 3 L33: 1.9511 L12: 0.3383 REMARK 3 L13: -1.6060 L23: -0.3410 REMARK 3 S TENSOR REMARK 3 S11: -0.1546 S12: 0.4549 S13: 0.0241 REMARK 3 S21: -0.2806 S22: 0.1549 S23: -0.0786 REMARK 3 S31: -0.2222 S32: 0.0594 S33: 0.0597 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 259 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9662 38.8700 7.5117 REMARK 3 T TENSOR REMARK 3 T11: 0.8416 T22: 0.3006 REMARK 3 T33: 0.1488 T12: 0.1079 REMARK 3 T13: 0.1650 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 2.3309 L22: 0.2940 REMARK 3 L33: 2.8082 L12: -0.6456 REMARK 3 L13: 0.7430 L23: -0.6758 REMARK 3 S TENSOR REMARK 3 S11: 0.1815 S12: 0.1649 S13: -0.3488 REMARK 3 S21: -0.4776 S22: 0.0293 S23: 0.1843 REMARK 3 S31: -0.3260 S32: -0.3834 S33: 0.4173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TY6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106203. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130796 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 1.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 5FQK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.0 M SODIUM FORMATE, 100 MM ACNA PH 4 REMARK 280 -0, PH 4.0, COUNTER-DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.19200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.17850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 123.00400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.19200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.17850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 123.00400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.19200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.17850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 123.00400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.19200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.17850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 123.00400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1144 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 25 REMARK 465 ALA A 26 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 MET B 25 REMARK 465 ALA B 26 REMARK 465 HIS B 296 REMARK 465 MET C 25 REMARK 465 ALA C 26 REMARK 465 HIS C 295 REMARK 465 HIS C 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 90 O HOH A 1001 1.99 REMARK 500 NH2 ARG B 230 O HOH B 1501 2.12 REMARK 500 O HOH A 1203 O HOH A 1218 2.13 REMARK 500 O HOH C 809 O HOH C 888 2.14 REMARK 500 OE1 GLU B 31 O HOH B 1502 2.15 REMARK 500 NE2 GLN B 269 O HOH B 1503 2.16 REMARK 500 OE2 GLU B 240 O HOH B 1504 2.19 REMARK 500 O HOH C 921 O HOH C 934 2.19 REMARK 500 O HOH C 844 O HOH C 948 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 123 CB CYS B 123 SG -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 153 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 256 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 256 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 163 CB - CG - OD1 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP B 271 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 -137.56 41.67 REMARK 500 TYR A 105 67.57 38.50 REMARK 500 ARG A 220 -122.70 -106.59 REMARK 500 ARG A 220 -122.70 -107.54 REMARK 500 GLU A 267 17.56 56.26 REMARK 500 CYS B 69 -143.39 45.61 REMARK 500 SER B 70 1.66 -66.33 REMARK 500 VAL B 159 -55.51 -121.62 REMARK 500 ARG B 220 -121.54 -108.93 REMARK 500 ARG B 220 -121.54 -112.89 REMARK 500 GLU B 240 175.07 -55.35 REMARK 500 CYS C 69 -143.51 48.69 REMARK 500 VAL C 159 -54.21 -124.96 REMARK 500 ASP C 163 -34.33 -130.25 REMARK 500 ARG C 220 -120.46 -113.80 REMARK 500 ARG C 220 -120.46 -111.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 910 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 97 O REMARK 620 2 VAL A 113 O 91.1 REMARK 620 3 HOH A1081 O 91.6 169.7 REMARK 620 4 HOH A1124 O 122.9 82.1 88.1 REMARK 620 5 HOH B1668 O 116.1 97.8 90.0 121.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6NT A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 1408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 1412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6NT B 1413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6NT C 707 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FQK RELATED DB: PDB REMARK 900 RELATED ID: 5FQI RELATED DB: PDB DBREF 6TY6 A 25 296 PDB 6TY6 6TY6 25 296 DBREF 6TY6 B 25 296 PDB 6TY6 6TY6 25 296 DBREF 6TY6 C 25 296 PDB 6TY6 6TY6 25 296 SEQRES 1 A 269 MET ALA ALA ALA LEU SER GLU GLN LEU ALA GLU LEU GLU SEQRES 2 A 269 LYS ARG SER GLY GLY ARG LEU GLY VAL ALA VAL LEU ASP SEQRES 3 A 269 THR ALA THR GLY ARG ARG PHE GLY TYR ARG GLY ASP GLU SEQRES 4 A 269 ARG PHE PRO MET CYS SER THR PHE LYS ALA LEU LEU ALA SEQRES 5 A 269 ALA ALA VAL LEU ALA ARG VAL ASP GLN GLY LYS GLU ASN SEQRES 6 A 269 LEU ASP ARG ARG ILE THR TYR GLY LYS GLU ASP LEU VAL SEQRES 7 A 269 ASP TYR SER PRO VAL THR GLU LYS HIS VAL GLY ASP GLY SEQRES 8 A 269 MET THR VAL ALA GLU LEU CYS GLU ALA ALA ILE THR TYR SEQRES 9 A 269 SER ASP ASN THR ALA ALA ASN LEU LEU LEU GLU ALA LEU SEQRES 10 A 269 GLY GLY PRO ALA ALA LEU THR ALA PHE LEU ARG SER ILE SEQRES 11 A 269 GLY ASP ASN VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 A 269 LEU ASN THR ALA ALA PRO GLY ASP PRO ARG ASP THR THR SEQRES 13 A 269 THR PRO ALA ALA MET ALA ALA THR LEU ARG THR LEU LEU SEQRES 14 A 269 LEU GLY ASP VAL LEU SER PRO ALA SER ARG GLN GLN LEU SEQRES 15 A 269 VAL ASP TRP LEU ILE ALA ASN LYS THR GLY ASP LYS ARG SEQRES 16 A 269 LEU ARG ALA GLY LEU PRO ALA ASP ASP ARG VAL GLY ASP SEQRES 17 A 269 LYS THR GLY THR GLY GLU HIS GLY THR THR ASN ASP ILE SEQRES 18 A 269 ALA VAL VAL TRP PRO PRO ASN ARG ALA PRO ILE PHE LEU SEQRES 19 A 269 ALA VAL TYR LEU THR GLU SER GLN VAL ASP ALA ASP ALA SEQRES 20 A 269 ARG ASP ALA VAL ILE ALA GLU VAL ALA ARG LEU VAL VAL SEQRES 21 A 269 ALA ALA TRP LEU HIS HIS HIS HIS HIS SEQRES 1 B 269 MET ALA ALA ALA LEU SER GLU GLN LEU ALA GLU LEU GLU SEQRES 2 B 269 LYS ARG SER GLY GLY ARG LEU GLY VAL ALA VAL LEU ASP SEQRES 3 B 269 THR ALA THR GLY ARG ARG PHE GLY TYR ARG GLY ASP GLU SEQRES 4 B 269 ARG PHE PRO MET CYS SER THR PHE LYS ALA LEU LEU ALA SEQRES 5 B 269 ALA ALA VAL LEU ALA ARG VAL ASP GLN GLY LYS GLU ASN SEQRES 6 B 269 LEU ASP ARG ARG ILE THR TYR GLY LYS GLU ASP LEU VAL SEQRES 7 B 269 ASP TYR SER PRO VAL THR GLU LYS HIS VAL GLY ASP GLY SEQRES 8 B 269 MET THR VAL ALA GLU LEU CYS GLU ALA ALA ILE THR TYR SEQRES 9 B 269 SER ASP ASN THR ALA ALA ASN LEU LEU LEU GLU ALA LEU SEQRES 10 B 269 GLY GLY PRO ALA ALA LEU THR ALA PHE LEU ARG SER ILE SEQRES 11 B 269 GLY ASP ASN VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 B 269 LEU ASN THR ALA ALA PRO GLY ASP PRO ARG ASP THR THR SEQRES 13 B 269 THR PRO ALA ALA MET ALA ALA THR LEU ARG THR LEU LEU SEQRES 14 B 269 LEU GLY ASP VAL LEU SER PRO ALA SER ARG GLN GLN LEU SEQRES 15 B 269 VAL ASP TRP LEU ILE ALA ASN LYS THR GLY ASP LYS ARG SEQRES 16 B 269 LEU ARG ALA GLY LEU PRO ALA ASP ASP ARG VAL GLY ASP SEQRES 17 B 269 LYS THR GLY THR GLY GLU HIS GLY THR THR ASN ASP ILE SEQRES 18 B 269 ALA VAL VAL TRP PRO PRO ASN ARG ALA PRO ILE PHE LEU SEQRES 19 B 269 ALA VAL TYR LEU THR GLU SER GLN VAL ASP ALA ASP ALA SEQRES 20 B 269 ARG ASP ALA VAL ILE ALA GLU VAL ALA ARG LEU VAL VAL SEQRES 21 B 269 ALA ALA TRP LEU HIS HIS HIS HIS HIS SEQRES 1 C 269 MET ALA ALA ALA LEU SER GLU GLN LEU ALA GLU LEU GLU SEQRES 2 C 269 LYS ARG SER GLY GLY ARG LEU GLY VAL ALA VAL LEU ASP SEQRES 3 C 269 THR ALA THR GLY ARG ARG PHE GLY TYR ARG GLY ASP GLU SEQRES 4 C 269 ARG PHE PRO MET CYS SER THR PHE LYS ALA LEU LEU ALA SEQRES 5 C 269 ALA ALA VAL LEU ALA ARG VAL ASP GLN GLY LYS GLU ASN SEQRES 6 C 269 LEU ASP ARG ARG ILE THR TYR GLY LYS GLU ASP LEU VAL SEQRES 7 C 269 ASP TYR SER PRO VAL THR GLU LYS HIS VAL GLY ASP GLY SEQRES 8 C 269 MET THR VAL ALA GLU LEU CYS GLU ALA ALA ILE THR TYR SEQRES 9 C 269 SER ASP ASN THR ALA ALA ASN LEU LEU LEU GLU ALA LEU SEQRES 10 C 269 GLY GLY PRO ALA ALA LEU THR ALA PHE LEU ARG SER ILE SEQRES 11 C 269 GLY ASP ASN VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 C 269 LEU ASN THR ALA ALA PRO GLY ASP PRO ARG ASP THR THR SEQRES 13 C 269 THR PRO ALA ALA MET ALA ALA THR LEU ARG THR LEU LEU SEQRES 14 C 269 LEU GLY ASP VAL LEU SER PRO ALA SER ARG GLN GLN LEU SEQRES 15 C 269 VAL ASP TRP LEU ILE ALA ASN LYS THR GLY ASP LYS ARG SEQRES 16 C 269 LEU ARG ALA GLY LEU PRO ALA ASP ASP ARG VAL GLY ASP SEQRES 17 C 269 LYS THR GLY THR GLY GLU HIS GLY THR THR ASN ASP ILE SEQRES 18 C 269 ALA VAL VAL TRP PRO PRO ASN ARG ALA PRO ILE PHE LEU SEQRES 19 C 269 ALA VAL TYR LEU THR GLU SER GLN VAL ASP ALA ASP ALA SEQRES 20 C 269 ARG ASP ALA VAL ILE ALA GLU VAL ALA ARG LEU VAL VAL SEQRES 21 C 269 ALA ALA TRP LEU HIS HIS HIS HIS HIS HET GOL A 901 6 HET FMT A 902 3 HET FMT A 903 3 HET ACT A 904 4 HET ACT A 905 4 HET FMT A 906 3 HET GOL A 907 6 HET FMT A 908 3 HET ACT A 909 4 HET NA A 910 1 HET 6NT A 911 12 HET FMT B1401 3 HET GOL B1402 6 HET FMT B1403 3 HET FMT B1404 3 HET FMT B1405 3 HET FMT B1406 3 HET GOL B1407 6 HET ACT B1408 4 HET FMT B1409 3 HET FMT B1410 3 HET FMT B1411 3 HET FMT B1412 3 HET 6NT B1413 12 HET GOL C 701 6 HET FMT C 702 3 HET FMT C 703 3 HET FMT C 704 3 HET FMT C 705 3 HET ACT C 706 4 HET 6NT C 707 12 HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM 6NT 6-NITROBENZOTRIAZOLE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 5(C3 H8 O3) FORMUL 5 FMT 17(C H2 O2) FORMUL 7 ACT 5(C2 H3 O2 1-) FORMUL 13 NA NA 1+ FORMUL 14 6NT 3(C6 H4 N4 O2) FORMUL 35 HOH *603(H2 O) HELIX 1 AA1 ALA A 27 GLY A 41 1 15 HELIX 2 AA2 THR A 71 GLN A 86 1 16 HELIX 3 AA3 GLY A 98 LEU A 102 5 5 HELIX 4 AA4 VAL A 108 HIS A 112 5 5 HELIX 5 AA5 VAL A 119 TYR A 129 1 11 HELIX 6 AA6 ASP A 131 GLY A 143 1 13 HELIX 7 AA7 GLY A 144 ILE A 155 1 12 HELIX 8 AA8 PRO A 167 THR A 171 5 5 HELIX 9 AA9 THR A 182 GLY A 196 1 15 HELIX 10 AB1 SER A 200 ALA A 213 1 14 HELIX 11 AB2 ARG A 220 LEU A 225 1 6 HELIX 12 AB3 ASP A 271 HIS A 292 1 22 HELIX 13 AB4 ALA B 28 GLY B 41 1 14 HELIX 14 AB5 THR B 71 GLN B 86 1 16 HELIX 15 AB6 GLY B 98 LEU B 102 5 5 HELIX 16 AB7 VAL B 108 HIS B 112 5 5 HELIX 17 AB8 VAL B 119 TYR B 129 1 11 HELIX 18 AB9 ASP B 131 GLY B 143 1 13 HELIX 19 AC1 GLY B 144 ILE B 155 1 12 HELIX 20 AC2 PRO B 167 THR B 171 5 5 HELIX 21 AC3 THR B 182 GLY B 196 1 15 HELIX 22 AC4 SER B 200 ALA B 213 1 14 HELIX 23 AC5 ARG B 220 LEU B 225 1 6 HELIX 24 AC6 ASP B 271 HIS B 295 1 25 HELIX 25 AC7 ALA C 28 GLY C 41 1 14 HELIX 26 AC8 THR C 71 GLN C 86 1 16 HELIX 27 AC9 GLY C 98 LEU C 102 5 5 HELIX 28 AD1 VAL C 108 HIS C 112 5 5 HELIX 29 AD2 VAL C 119 TYR C 129 1 11 HELIX 30 AD3 ASP C 131 GLY C 143 1 13 HELIX 31 AD4 GLY C 144 ILE C 155 1 12 HELIX 32 AD5 PRO C 167 THR C 171 5 5 HELIX 33 AD6 THR C 182 GLY C 196 1 15 HELIX 34 AD7 SER C 200 ALA C 213 1 14 HELIX 35 AD8 ARG C 220 LEU C 225 1 6 HELIX 36 AD9 ASP C 271 HIS C 292 1 22 SHEET 1 AA1 5 ARG A 56 TYR A 60 0 SHEET 2 AA1 5 ARG A 43 ASP A 50 -1 N VAL A 46 O TYR A 60 SHEET 3 AA1 5 ILE A 259 THR A 266 -1 O TYR A 264 N GLY A 45 SHEET 4 AA1 5 THR A 243 TRP A 251 -1 N ALA A 248 O LEU A 261 SHEET 5 AA1 5 ARG A 230 GLY A 238 -1 N GLY A 236 O ASN A 245 SHEET 1 AA2 2 PHE A 66 PRO A 67 0 SHEET 2 AA2 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AA3 2 ARG A 94 ILE A 95 0 SHEET 2 AA3 2 MET A 117 THR A 118 -1 O MET A 117 N ILE A 95 SHEET 1 AA4 5 ARG B 56 TYR B 60 0 SHEET 2 AA4 5 ARG B 43 ASP B 50 -1 N VAL B 46 O TYR B 60 SHEET 3 AA4 5 ILE B 259 THR B 266 -1 O TYR B 264 N GLY B 45 SHEET 4 AA4 5 THR B 243 TRP B 251 -1 N VAL B 250 O ILE B 259 SHEET 5 AA4 5 ARG B 230 GLY B 238 -1 N ARG B 230 O TRP B 251 SHEET 1 AA5 2 PHE B 66 PRO B 67 0 SHEET 2 AA5 2 THR B 180 THR B 181 -1 O THR B 181 N PHE B 66 SHEET 1 AA6 2 ARG B 94 ILE B 95 0 SHEET 2 AA6 2 MET B 117 THR B 118 -1 O MET B 117 N ILE B 95 SHEET 1 AA7 5 ARG C 56 TYR C 60 0 SHEET 2 AA7 5 ARG C 43 ASP C 50 -1 N VAL C 46 O TYR C 60 SHEET 3 AA7 5 ILE C 259 THR C 266 -1 O THR C 266 N ARG C 43 SHEET 4 AA7 5 THR C 243 TRP C 251 -1 N VAL C 250 O ILE C 259 SHEET 5 AA7 5 ARG C 230 GLY C 238 -1 N GLY C 236 O ASN C 245 SHEET 1 AA8 2 PHE C 66 PRO C 67 0 SHEET 2 AA8 2 THR C 180 THR C 181 -1 O THR C 181 N PHE C 66 SHEET 1 AA9 2 ARG C 94 ILE C 95 0 SHEET 2 AA9 2 MET C 117 THR C 118 -1 O MET C 117 N ILE C 95 LINK O TYR A 97 NA NA A 910 1555 1555 2.50 LINK O VAL A 113 NA NA A 910 1555 1555 2.30 LINK NA NA A 910 O HOH A1081 1555 1555 2.34 LINK NA NA A 910 O HOH A1124 1555 1555 2.34 LINK NA NA A 910 O HOH B1668 1555 8455 2.35 CISPEP 1 GLU A 166 PRO A 167 0 4.20 CISPEP 2 GLU B 166 PRO B 167 0 2.71 CISPEP 3 GLU C 166 PRO C 167 0 2.61 SITE 1 AC1 3 PRO A 107 LYS A 111 TYR A 129 SITE 1 AC2 9 SER A 70 SER A 130 ARG A 220 LYS A 234 SITE 2 AC2 9 THR A 235 GLY A 236 THR A 237 FMT A 903 SITE 3 AC2 9 HOH A1122 SITE 1 AC3 8 CYS A 69 SER A 70 ASN A 170 GLY A 236 SITE 2 AC3 8 THR A 237 FMT A 902 HOH A1020 HOH A1083 SITE 1 AC4 7 ARG A 65 GLY A 175 ASP A 176 PRO A 177 SITE 2 AC4 7 HOH A1064 HOH A1170 ASP C 101 SITE 1 AC5 6 ILE A 155 GLY A 156 ASP A 157 THR A 189 SITE 2 AC5 6 THR A 192 HOH A1002 SITE 1 AC6 6 ASP A 63 VAL A 159 HOH A1004 HOH A1023 SITE 2 AC6 6 HOH A1035 HOH A1053 SITE 1 AC7 9 GLY A 98 GLU A 100 HOH A1081 HOH A1107 SITE 2 AC7 9 ARG B 43 GLU B 64 ARG B 65 HOH B1549 SITE 3 AC7 9 HOH B1621 SITE 1 AC8 5 GLU A 100 ASP A 101 HOH A1059 GLY B 175 SITE 2 AC8 5 PRO B 177 SITE 1 AC9 4 ARG A 161 PRO A 177 HOH A1159 TRP C 165 SITE 1 AD1 5 TYR A 97 VAL A 113 HOH A1081 HOH A1124 SITE 2 AD1 5 HOH B1668 SITE 1 AD2 10 VAL A 48 ASP A 229 VAL A 250 PRO A 252 SITE 2 AD2 10 ILE A 259 LEU A 261 VAL A 286 TRP A 290 SITE 3 AD2 10 HOH A1071 ARG B 284 SITE 1 AD3 3 TRP A 165 ARG B 161 HOH B1511 SITE 1 AD4 8 ILE B 155 GLY B 156 ASP B 157 ALA B 185 SITE 2 AD4 8 ALA B 188 THR B 189 THR B 192 HOH B1526 SITE 1 AD5 6 CYS B 69 SER B 70 ASN B 170 GLY B 236 SITE 2 AD5 6 THR B 237 FMT B1404 SITE 1 AD6 8 SER B 70 SER B 130 ARG B 220 LYS B 234 SITE 2 AD6 8 THR B 235 GLY B 236 THR B 237 FMT B1403 SITE 1 AD7 4 ARG B 55 ALA B 289 HIS B 293 HOH B1592 SITE 1 AD8 3 ASP B 104 PRO B 167 HOH B1612 SITE 1 AD9 5 HIS B 241 GLY B 242 GLU B 267 SER B 268 SITE 2 AD9 5 GLN B 269 SITE 1 AE1 7 THR B 96 HOH B1520 HOH B1566 HOH B1604 SITE 2 AE1 7 ASP C 63 VAL C 159 HOH C 822 SITE 1 AE2 4 VAL A 113 GLY A 114 PRO B 201 HOH B1615 SITE 1 AE3 3 VAL B 108 LYS B 111 TYR B 129 SITE 1 AE4 5 GLN A 32 HIS A 292 ALA B 288 HIS B 292 SITE 2 AE4 5 HOH B1626 SITE 1 AE5 4 GLY B 143 TRP B 165 ARG C 161 ASP C 163 SITE 1 AE6 10 ARG A 284 ASP B 229 VAL B 250 ARG B 256 SITE 2 AE6 10 ILE B 259 LEU B 261 VAL B 286 VAL B 287 SITE 3 AE6 10 TRP B 290 HOH B1565 SITE 1 AE7 4 GLU B 140 TRP B 165 ARG C 161 PRO C 177 SITE 1 AE8 7 CYS C 69 SER C 70 ASN C 170 GLY C 236 SITE 2 AE8 7 THR C 237 FMT C 703 HOH C 825 SITE 1 AE9 8 SER C 70 SER C 130 ARG C 220 LYS C 234 SITE 2 AE9 8 THR C 235 GLY C 236 THR C 237 FMT C 702 SITE 1 AF1 7 ARG A 65 HOH A1159 ASP C 101 LEU C 137 SITE 2 AF1 7 GLU C 140 HOH C 850 HOH C 852 SITE 1 AF2 3 ASP C 228 ALA C 280 ARG C 284 SITE 1 AF3 5 ILE C 155 THR C 189 THR C 192 HOH C 801 SITE 2 AF3 5 HOH C 927 SITE 1 AF4 10 VAL C 48 ASP C 229 VAL C 250 ILE C 259 SITE 2 AF4 10 LEU C 261 ARG C 284 VAL C 286 VAL C 287 SITE 3 AF4 10 TRP C 290 HOH C 831 CRYST1 78.384 148.357 246.008 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012758 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006740 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004065 0.00000