HEADER TRANSCRIPTION 13-AUG-19 6U04 TITLE CRYSTAL STRUCTURE OF HUMAN BRPF1 PZP BOUND TO HISTONE H3 TAIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.3,BRPF1, PEREGRIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BROMODOMAIN AND PHD FINGER-CONTAINING PROTEIN 1,PROTEIN COMPND 5 BR140; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: H3F3A, H3.3A, H3F3, PP781, H3F3B, H3.3B, BRPF1, BR140; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EPIGENETICS, NUCLEOSOME, DNA BINDING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR B.J.KLEIN,T.G.KUTATELADZE REVDAT 3 11-OCT-23 6U04 1 REMARK REVDAT 2 22-JAN-20 6U04 1 JRNL REVDAT 1 27-NOV-19 6U04 0 JRNL AUTH B.J.KLEIN,K.L.COX,S.M.JANG,J.COTE,M.G.POIRIER, JRNL AUTH 2 T.G.KUTATELADZE JRNL TITL MOLECULAR BASIS FOR THE PZP DOMAIN OF BRPF1 ASSOCIATION WITH JRNL TITL 2 CHROMATIN. JRNL REF STRUCTURE V. 28 105 2020 JRNL REFN ISSN 0969-2126 JRNL PMID 31711755 JRNL DOI 10.1016/J.STR.2019.10.014 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 12773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.5574 - 3.6221 1.00 1325 147 0.1449 0.1714 REMARK 3 2 3.6221 - 3.1656 0.98 1274 141 0.1583 0.1968 REMARK 3 3 3.1656 - 2.8768 1.00 1289 144 0.1694 0.2111 REMARK 3 4 2.8768 - 2.6710 0.99 1259 140 0.1778 0.2358 REMARK 3 5 2.6710 - 2.5137 0.98 1237 137 0.1758 0.2190 REMARK 3 6 2.5137 - 2.3880 0.97 1242 136 0.1854 0.2431 REMARK 3 7 2.3880 - 2.2841 0.99 1225 137 0.1925 0.2380 REMARK 3 8 2.2841 - 2.2000 0.97 1221 134 0.2053 0.2756 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 274 THROUGH 451) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3415 22.2796 -10.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.3019 T22: 0.2040 REMARK 3 T33: 0.2070 T12: -0.0467 REMARK 3 T13: 0.0610 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 2.3052 L22: 0.8005 REMARK 3 L33: 2.1440 L12: -0.0841 REMARK 3 L13: -1.1800 L23: 0.0365 REMARK 3 S TENSOR REMARK 3 S11: -0.1863 S12: 0.2581 S13: -0.2400 REMARK 3 S21: 0.0481 S22: 0.0298 S23: 0.0165 REMARK 3 S31: 0.2282 S32: -0.1165 S33: 0.1130 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 1 THROUGH 3) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9448 3.3580 -13.5619 REMARK 3 T TENSOR REMARK 3 T11: 1.2113 T22: 0.5823 REMARK 3 T33: 0.8743 T12: -0.1394 REMARK 3 T13: 0.2753 T23: -0.3144 REMARK 3 L TENSOR REMARK 3 L11: 7.6177 L22: 0.6780 REMARK 3 L33: 3.7080 L12: -1.4440 REMARK 3 L13: -4.2841 L23: 0.0875 REMARK 3 S TENSOR REMARK 3 S11: -0.5008 S12: -0.9315 S13: -0.2523 REMARK 3 S21: 2.8105 S22: -0.1317 S23: 1.5047 REMARK 3 S31: 0.9480 S32: -0.3804 S33: 0.6236 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12975 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.196 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 20.80 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5ERC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS-HCL REMARK 280 PH 8.5, 40% (V/V) PEG400, AND 0.01M PRASEODYMIUM(III) ACETATE REMARK 280 HYDRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.76567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.53133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.64850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 129.41417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.88283 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.76567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 103.53133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 129.41417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 77.64850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 25.88283 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 257 REMARK 465 GLN A 258 REMARK 465 THR A 259 REMARK 465 ALA A 260 REMARK 465 ARG A 261 REMARK 465 LYS A 262 REMARK 465 SER A 263 REMARK 465 THR A 264 REMARK 465 GLY A 265 REMARK 465 GLY A 266 REMARK 465 SER A 267 REMARK 465 GLY A 268 REMARK 465 SER A 269 REMARK 465 SER A 270 REMARK 465 ASP A 271 REMARK 465 GLU A 272 REMARK 465 ASP A 273 REMARK 465 ASN A 286 REMARK 465 VAL A 426 REMARK 465 ARG A 427 REMARK 465 GLU A 428 REMARK 465 THR A 429 REMARK 465 GLY A 430 REMARK 465 ALA A 431 REMARK 465 ASN A 432 REMARK 465 GLY A 433 REMARK 465 THR A 434 REMARK 465 SER A 435 REMARK 465 PHE A 436 REMARK 465 SER A 437 REMARK 465 SER A 452 REMARK 465 ALA A 453 REMARK 465 ARG A 454 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 288 75.93 -150.98 REMARK 500 SER A 323 65.34 -117.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 506 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 276 SG REMARK 620 2 CYS A 279 SG 108.1 REMARK 620 3 HIS A 301 ND1 101.4 97.4 REMARK 620 4 CYS A 304 SG 121.4 113.3 112.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 293 SG REMARK 620 2 CYS A 296 SG 109.4 REMARK 620 3 CYS A 317 SG 114.3 111.2 REMARK 620 4 CYS A 320 SG 105.3 107.4 109.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 330 SG REMARK 620 2 CYS A 333 SG 113.6 REMARK 620 3 HIS A 350 ND1 99.6 95.4 REMARK 620 4 CYS A 353 SG 121.5 109.5 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PR A 501 PR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 344 OD2 REMARK 620 2 HOH A 682 O 91.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 386 SG REMARK 620 2 CYS A 389 SG 108.5 REMARK 620 3 HIS A 410 ND1 99.4 104.0 REMARK 620 4 CYS A 413 SG 112.0 115.1 116.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 400 SG REMARK 620 2 CYS A 405 SG 111.0 REMARK 620 3 CYS A 444 SG 115.6 113.1 REMARK 620 4 HIS A 447 ND1 109.0 104.8 102.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 506 DBREF 6U04 A 1 265 UNP P84243 H33_HUMAN 2 13 DBREF 6U04 A 271 454 UNP P55201 BRPF1_HUMAN 271 454 SEQADV 6U04 GLY A 266 UNP P84243 LINKER SEQADV 6U04 SER A 267 UNP P84243 LINKER SEQADV 6U04 GLY A 268 UNP P84243 LINKER SEQADV 6U04 SER A 269 UNP P84243 LINKER SEQADV 6U04 SER A 270 UNP P84243 LINKER SEQRES 1 A 201 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 A 201 SER GLY SER SER ASP GLU ASP ALA VAL CYS CYS ILE CYS SEQRES 3 A 201 ASN ASP GLY GLU CYS GLN ASN SER ASN VAL ILE LEU PHE SEQRES 4 A 201 CYS ASP MET CYS ASN LEU ALA VAL HIS GLN GLU CYS TYR SEQRES 5 A 201 GLY VAL PRO TYR ILE PRO GLU GLY GLN TRP LEU CYS ARG SEQRES 6 A 201 ARG CYS LEU GLN SER PRO SER ARG ALA VAL ASP CYS ALA SEQRES 7 A 201 LEU CYS PRO ASN LYS GLY GLY ALA PHE LYS GLN THR ASP SEQRES 8 A 201 ASP GLY ARG TRP ALA HIS VAL VAL CYS ALA LEU TRP ILE SEQRES 9 A 201 PRO GLU VAL CYS PHE ALA ASN THR VAL PHE LEU GLU PRO SEQRES 10 A 201 ILE ASP SER ILE GLU HIS ILE PRO PRO ALA ARG TRP LYS SEQRES 11 A 201 LEU THR CYS TYR ILE CYS LYS GLN ARG GLY SER GLY ALA SEQRES 12 A 201 CYS ILE GLN CYS HIS LYS ALA ASN CYS TYR THR ALA PHE SEQRES 13 A 201 HIS VAL THR CYS ALA GLN GLN ALA GLY LEU TYR MET LYS SEQRES 14 A 201 MET GLU PRO VAL ARG GLU THR GLY ALA ASN GLY THR SER SEQRES 15 A 201 PHE SER VAL ARG LYS THR ALA TYR CYS ASP ILE HIS THR SEQRES 16 A 201 PRO PRO GLY SER ALA ARG HET PR A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET ZN A 504 1 HET ZN A 505 1 HET ZN A 506 1 HETNAM PR PRASEODYMIUM ION HETNAM ZN ZINC ION FORMUL 2 PR PR 3+ FORMUL 3 ZN 5(ZN 2+) FORMUL 8 HOH *108(H2 O) HELIX 1 AA1 GLN A 302 GLY A 306 1 5 HELIX 2 AA2 CYS A 317 SER A 323 1 7 HELIX 3 AA3 VAL A 351 ILE A 357 1 7 HELIX 4 AA4 SER A 373 ILE A 377 5 5 HELIX 5 AA5 PRO A 378 LYS A 383 5 6 HELIX 6 AA6 HIS A 410 ALA A 417 1 8 SHEET 1 AA1 2 ILE A 290 PHE A 292 0 SHEET 2 AA1 2 ALA A 299 HIS A 301 -1 O VAL A 300 N LEU A 291 SHEET 1 AA2 2 PHE A 340 GLN A 342 0 SHEET 2 AA2 2 TRP A 348 HIS A 350 -1 O ALA A 349 N LYS A 341 SHEET 1 AA3 2 CYS A 361 ASN A 364 0 SHEET 2 AA3 2 GLU A 369 ASP A 372 -1 O ASP A 372 N CYS A 361 SHEET 1 AA4 2 ILE A 398 GLN A 399 0 SHEET 2 AA4 2 ALA A 408 PHE A 409 -1 O PHE A 409 N ILE A 398 SHEET 1 AA5 2 MET A 421 GLU A 424 0 SHEET 2 AA5 2 ARG A 439 ALA A 442 -1 O THR A 441 N LYS A 422 LINK SG CYS A 276 ZN ZN A 506 1555 1555 2.20 LINK SG CYS A 279 ZN ZN A 506 1555 1555 2.39 LINK SG CYS A 293 ZN ZN A 504 1555 1555 2.37 LINK SG CYS A 296 ZN ZN A 504 1555 1555 2.40 LINK ND1 HIS A 301 ZN ZN A 506 1555 1555 2.07 LINK SG CYS A 304 ZN ZN A 506 1555 1555 2.15 LINK SG CYS A 317 ZN ZN A 504 1555 1555 2.39 LINK SG CYS A 320 ZN ZN A 504 1555 1555 2.28 LINK SG CYS A 330 ZN ZN A 502 1555 1555 2.34 LINK SG CYS A 333 ZN ZN A 502 1555 1555 2.30 LINK OD2 ASP A 344 PR PR A 501 1555 1555 2.31 LINK ND1 HIS A 350 ZN ZN A 502 1555 1555 2.00 LINK SG CYS A 353 ZN ZN A 502 1555 1555 2.17 LINK SG CYS A 386 ZN ZN A 503 1555 1555 2.29 LINK SG CYS A 389 ZN ZN A 503 1555 1555 2.25 LINK SG CYS A 400 ZN ZN A 505 1555 1555 2.42 LINK SG CYS A 405 ZN ZN A 505 1555 1555 2.29 LINK ND1 HIS A 410 ZN ZN A 503 1555 1555 2.05 LINK SG CYS A 413 ZN ZN A 503 1555 1555 2.33 LINK SG CYS A 444 ZN ZN A 505 1555 1555 2.37 LINK ND1 HIS A 447 ZN ZN A 505 1555 1555 2.05 LINK PR PR A 501 O HOH A 682 1555 10664 3.25 CISPEP 1 GLU A 369 PRO A 370 0 -18.49 SITE 1 AC1 1 ASP A 344 SITE 1 AC2 4 CYS A 330 CYS A 333 HIS A 350 CYS A 353 SITE 1 AC3 4 CYS A 386 CYS A 389 HIS A 410 CYS A 413 SITE 1 AC4 4 CYS A 293 CYS A 296 CYS A 317 CYS A 320 SITE 1 AC5 4 CYS A 400 CYS A 405 CYS A 444 HIS A 447 SITE 1 AC6 4 CYS A 276 CYS A 279 HIS A 301 CYS A 304 CRYST1 72.461 72.461 155.297 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013801 0.007968 0.000000 0.00000 SCALE2 0.000000 0.015935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006439 0.00000