HEADER HYDROLASE 21-AUG-19 6U2Z
TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM
TITLE 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH THE HYDROLYZED
TITLE 3 MOXALACTAM AND TWO COPPER IONS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PUTATIVE METALLO-BETA-LACTAMASE L1 (BETA-LACTAMASE TYPE II)
COMPND 3 (EC 3.5.2.6) (PENICILLINASE);
COMPND 4 CHAIN: A;
COMPND 5 EC: 3.5.2.6;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A);
SOURCE 3 ORGANISM_TAXID: 522373;
SOURCE 4 STRAIN: K279A;
SOURCE 5 GENE: SMLT2667;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3;
SOURCE 9 EXPRESSION_SYSTEM_VARIANT: GOLD;
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53
KEYWDS LACTAM ANTIBIOTICS, MOXALACTAM, STRUCTURAL GENOMICS, CENTER FOR
KEYWDS 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS
AUTHOR 2 OF INFECTIOUS DISEASES (CSGID)
REVDAT 5 13-NOV-24 6U2Z 1 REMARK
REVDAT 4 29-NOV-23 6U2Z 1 REMARK
REVDAT 3 11-OCT-23 6U2Z 1 COMPND HETNAM
REVDAT 2 18-DEC-19 6U2Z 1 REMARK
REVDAT 1 04-SEP-19 6U2Z 0
JRNL AUTH Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,
JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES
JRNL AUTH 3 (CSGID)
JRNL TITL CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM
JRNL TITL 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH THE
JRNL TITL 3 HYDROLYZED MOXALACTAM AND TWO COPPER IONS
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.38 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.34
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 3 NUMBER OF REFLECTIONS : 13167
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.188
REMARK 3 R VALUE (WORKING SET) : 0.186
REMARK 3 FREE R VALUE : 0.229
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920
REMARK 3 FREE R VALUE TEST SET COUNT : 648
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 43.3400 - 4.0700 0.99 2645 151 0.1523 0.2005
REMARK 3 2 4.0700 - 3.2300 1.00 2530 116 0.1846 0.2174
REMARK 3 3 3.2300 - 2.8200 1.00 2458 131 0.2155 0.2575
REMARK 3 4 2.8200 - 2.5600 1.00 2468 127 0.2267 0.2895
REMARK 3 5 2.5600 - 2.3800 0.99 2418 123 0.2268 0.2564
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.240
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 35.72
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.002 2091
REMARK 3 ANGLE : 0.551 2858
REMARK 3 CHIRALITY : 0.041 317
REMARK 3 PLANARITY : 0.004 377
REMARK 3 DIHEDRAL : 14.651 1241
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 7
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 53 )
REMARK 3 ORIGIN FOR THE GROUP (A): 24.7074 19.3253 7.8085
REMARK 3 T TENSOR
REMARK 3 T11: 0.3312 T22: 0.2685
REMARK 3 T33: 0.3235 T12: 0.0284
REMARK 3 T13: 0.0109 T23: 0.0236
REMARK 3 L TENSOR
REMARK 3 L11: 0.9768 L22: 0.7366
REMARK 3 L33: 0.9480 L12: -0.3226
REMARK 3 L13: -0.5814 L23: 0.3426
REMARK 3 S TENSOR
REMARK 3 S11: 0.0061 S12: 0.2246 S13: -0.4207
REMARK 3 S21: -0.1917 S22: -0.1443 S23: 0.0279
REMARK 3 S31: 0.0847 S32: -0.0218 S33: 0.1481
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 128 )
REMARK 3 ORIGIN FOR THE GROUP (A): 35.4586 25.9623 9.9898
REMARK 3 T TENSOR
REMARK 3 T11: 0.3122 T22: 0.3055
REMARK 3 T33: 0.2718 T12: 0.0261
REMARK 3 T13: 0.0121 T23: 0.0104
REMARK 3 L TENSOR
REMARK 3 L11: 0.8319 L22: 1.3707
REMARK 3 L33: 0.8869 L12: -0.5264
REMARK 3 L13: -0.3205 L23: 0.2667
REMARK 3 S TENSOR
REMARK 3 S11: -0.1129 S12: -0.1098 S13: 0.0146
REMARK 3 S21: 0.1948 S22: 0.0224 S23: -0.0682
REMARK 3 S31: 0.0899 S32: 0.0492 S33: 0.0796
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 204 )
REMARK 3 ORIGIN FOR THE GROUP (A): 31.9754 33.9842 0.9724
REMARK 3 T TENSOR
REMARK 3 T11: 0.2576 T22: 0.2510
REMARK 3 T33: 0.2650 T12: 0.0044
REMARK 3 T13: -0.0112 T23: -0.0264
REMARK 3 L TENSOR
REMARK 3 L11: 1.1223 L22: 1.3669
REMARK 3 L33: 0.8222 L12: 0.1570
REMARK 3 L13: 0.0470 L23: -0.3522
REMARK 3 S TENSOR
REMARK 3 S11: 0.0075 S12: 0.1092 S13: 0.0178
REMARK 3 S21: 0.1157 S22: -0.0712 S23: -0.0502
REMARK 3 S31: -0.0502 S32: -0.0226 S33: 0.0804
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 235 )
REMARK 3 ORIGIN FOR THE GROUP (A): 18.3783 36.4047 -8.5493
REMARK 3 T TENSOR
REMARK 3 T11: 0.2917 T22: 0.3209
REMARK 3 T33: 0.3158 T12: -0.0015
REMARK 3 T13: -0.0436 T23: -0.0333
REMARK 3 L TENSOR
REMARK 3 L11: 1.6001 L22: 1.0943
REMARK 3 L33: 1.1551 L12: -0.1753
REMARK 3 L13: -0.4893 L23: 0.0794
REMARK 3 S TENSOR
REMARK 3 S11: 0.0623 S12: -0.0409 S13: 0.1759
REMARK 3 S21: -0.1318 S22: 0.0095 S23: 0.0190
REMARK 3 S31: 0.1461 S32: -0.0227 S33: -0.0629
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 249 )
REMARK 3 ORIGIN FOR THE GROUP (A): 33.0037 24.4723 -7.7872
REMARK 3 T TENSOR
REMARK 3 T11: 0.2877 T22: 0.3096
REMARK 3 T33: 0.3272 T12: -0.0056
REMARK 3 T13: -0.0148 T23: -0.0095
REMARK 3 L TENSOR
REMARK 3 L11: 1.5157 L22: 2.2045
REMARK 3 L33: 1.4518 L12: -0.2670
REMARK 3 L13: 0.2224 L23: -0.1422
REMARK 3 S TENSOR
REMARK 3 S11: 0.1778 S12: 0.3466 S13: -0.0722
REMARK 3 S21: -0.0615 S22: 0.1313 S23: -0.0825
REMARK 3 S31: 0.1783 S32: -0.1110 S33: -0.3700
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 266 )
REMARK 3 ORIGIN FOR THE GROUP (A): 33.1095 14.0437 -7.1593
REMARK 3 T TENSOR
REMARK 3 T11: 0.3490 T22: 0.2608
REMARK 3 T33: 0.4159 T12: -0.0321
REMARK 3 T13: 0.0380 T23: -0.0657
REMARK 3 L TENSOR
REMARK 3 L11: 1.6864 L22: 1.4753
REMARK 3 L33: 2.1049 L12: 0.0078
REMARK 3 L13: -0.3477 L23: -0.0069
REMARK 3 S TENSOR
REMARK 3 S11: 0.0423 S12: 0.0439 S13: -0.3990
REMARK 3 S21: 0.0669 S22: -0.1178 S23: -0.2265
REMARK 3 S31: 0.7369 S32: -0.1307 S33: 0.0812
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 288 )
REMARK 3 ORIGIN FOR THE GROUP (A): 16.9235 27.9660 -14.4085
REMARK 3 T TENSOR
REMARK 3 T11: 0.5034 T22: 0.4295
REMARK 3 T33: 0.4010 T12: -0.0090
REMARK 3 T13: -0.0338 T23: -0.0505
REMARK 3 L TENSOR
REMARK 3 L11: 3.0317 L22: 1.0800
REMARK 3 L33: 0.5427 L12: -1.0581
REMARK 3 L13: -0.6109 L23: -0.1455
REMARK 3 S TENSOR
REMARK 3 S11: 0.4002 S12: 0.3593 S13: -0.1627
REMARK 3 S21: -0.2846 S22: -0.2361 S23: 0.0363
REMARK 3 S31: 0.4394 S32: -0.1357 S33: -0.1508
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6U2Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-19.
REMARK 100 THE DEPOSITION ID IS D_1000243827.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 21-APR-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 19-BM
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000
REMARK 200 DATA SCALING SOFTWARE : HKL-3000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13193
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 7.400
REMARK 200 R MERGE (I) : 0.18100
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9300
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 7.10
REMARK 200 R MERGE FOR SHELL (I) : 0.66700
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: HKL-3000, MOLREP
REMARK 200 STARTING MODEL: PDBID 6U0Y
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 53.68
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE PH 7.0, 20% W/V
REMARK 280 POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING DROP,
REMARK 280 TEMPERATURE 289K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -X,-Y,Z
REMARK 290 5555 Y,-X+Y,Z+1/3
REMARK 290 6555 X-Y,X,Z+2/3
REMARK 290 7555 Y,X,-Z+1/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+2/3
REMARK 290 10555 -Y,-X,-Z+1/3
REMARK 290 11555 -X+Y,Y,-Z
REMARK 290 12555 X,X-Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.93100
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.86200
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.93100
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.86200
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.93100
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.86200
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.93100
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.86200
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 9980 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 38510 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.11700
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.26929
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000
REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 32.93100
REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 52.11700
REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 90.26929
REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 32.93100
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A 17
REMARK 465 ASN A 18
REMARK 465 ALA A 19
REMARK 465 SER A 20
REMARK 465 ALA A 21
REMARK 465 ALA A 22
REMARK 465 THR A 289
REMARK 465 ARG A 290
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 23 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 74 156.75 65.58
REMARK 500 ALA A 106 54.32 -94.41
REMARK 500 HIS A 110 -30.45 -134.78
REMARK 500 ASP A 192 -167.02 -105.11
REMARK 500 TYR A 220 73.56 -152.04
REMARK 500 CYS A 239 88.96 -152.65
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CU A 302 CU
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 105 NE2
REMARK 620 2 HIS A 107 ND1 97.3
REMARK 620 3 HIS A 181 NE2 107.0 111.1
REMARK 620 4 HOH A 416 O 114.2 107.6 117.8
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CU A 301 CU
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 109 OD2
REMARK 620 2 HIS A 110 NE2 87.1
REMARK 620 3 HIS A 246 NE2 86.6 94.3
REMARK 620 4 3P7 A 300 N8 99.2 173.7 85.8
REMARK 620 5 3P7 A 300 O82 163.8 109.1 93.1 64.7
REMARK 620 6 HOH A 416 O 84.8 107.3 156.2 73.8 89.1
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 3P7 A 300
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 6U0Y RELATED DB: PDB
REMARK 900 THE SAME PROTEIN, THE APO FORM
REMARK 900 RELATED ID: 6U0Z RELATED DB: PDB
REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED PENICILLIN G
REMARK 900 RELATED ID: 6U10 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE INHIBITOR CAPTOPRIL
REMARK 900 RELATED ID: 6U13 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED MOXALACTAM
REMARK 900 RELATED ID: 6U2Y RELATED DB: PDB
REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED MOXALACTAM AND
REMARK 900 TWO NI IONS
REMARK 900 RELATED ID: CSGID-IDP97218 RELATED DB: TARGETTRACK
DBREF 6U2Z A 19 290 UNP B2FTM1 B2FTM1_STRMK 19 290
SEQADV 6U2Z SER A 17 UNP B2FTM1 EXPRESSION TAG
SEQADV 6U2Z ASN A 18 UNP B2FTM1 EXPRESSION TAG
SEQRES 1 A 274 SER ASN ALA SER ALA ALA GLU ALA PRO LEU PRO GLN LEU
SEQRES 2 A 274 ARG ALA TYR THR VAL ASP ALA SER TRP LEU GLN PRO MET
SEQRES 3 A 274 ALA PRO LEU GLN VAL ALA ASP HIS THR TRP GLN ILE GLY
SEQRES 4 A 274 THR GLU ASP LEU THR ALA LEU LEU VAL GLN THR ALA GLU
SEQRES 5 A 274 GLY ALA VAL LEU LEU ASP GLY GLY MET PRO GLN MET ALA
SEQRES 6 A 274 GLY HIS LEU LEU ASP ASN MET LYS LEU ARG GLY VAL ALA
SEQRES 7 A 274 PRO GLN ASP LEU ARG LEU ILE LEU LEU SER HIS ALA HIS
SEQRES 8 A 274 ALA ASP HIS ALA GLY PRO VAL ALA GLU LEU LYS ARG ARG
SEQRES 9 A 274 THR GLY ALA HIS VAL ALA ALA ASN ALA GLU THR ALA VAL
SEQRES 10 A 274 LEU LEU ALA ARG GLY GLY SER ASN ASP LEU HIS PHE GLY
SEQRES 11 A 274 ASP GLY ILE THR TYR PRO PRO ALA SER ALA ASP ARG ILE
SEQRES 12 A 274 ILE MET ASP GLY GLU VAL VAL THR VAL GLY GLY ILE ALA
SEQRES 13 A 274 PHE THR ALA HIS PHE MET PRO GLY HIS THR PRO GLY SER
SEQRES 14 A 274 THR ALA TRP THR TRP THR ASP THR ARG ASP GLY LYS PRO
SEQRES 15 A 274 VAL ARG ILE ALA TYR ALA ASP SER LEU SER ALA PRO GLY
SEQRES 16 A 274 TYR GLN LEU LYS GLY ASN PRO ARG TYR PRO ARG LEU ILE
SEQRES 17 A 274 GLU ASP TYR LYS ARG SER PHE ALA THR VAL ARG ALA LEU
SEQRES 18 A 274 PRO CYS ASP LEU LEU LEU THR PRO HIS PRO GLY ALA SER
SEQRES 19 A 274 ASN TRP ASN TYR ALA VAL GLY SER LYS ALA SER ALA GLU
SEQRES 20 A 274 ALA LEU THR CYS ASN ALA TYR ALA ASP ALA ALA GLU LYS
SEQRES 21 A 274 LYS PHE ASP ALA GLN LEU ALA ARG GLU THR ALA GLY THR
SEQRES 22 A 274 ARG
HET 3P7 A 300 29
HET CU A 301 1
HET CU A 302 1
HET EDO A 303 4
HETNAM 3P7 (2R)-2-[(1R)-1-{[(2R)-2-CARBOXY-2-(4-HYDROXYPHENYL)
HETNAM 2 3P7 ACETYL]AMINO}-1-METHOXY-2-OXOETHYL]-5-METHYLIDENE-5,6-
HETNAM 3 3P7 DIHYDRO-2H-1,3 -OXAZINE-4-CARBOXYLIC ACID
HETNAM CU COPPER (II) ION
HETNAM EDO 1,2-ETHANEDIOL
HETSYN 3P7 MOXALACTAM DERIVATIVE (OPEN FORM)
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 3P7 C18 H18 N2 O9
FORMUL 3 CU 2(CU 2+)
FORMUL 5 EDO C2 H6 O2
FORMUL 6 HOH *61(H2 O)
HELIX 1 AA1 ASP A 35 GLN A 40 5 6
HELIX 2 AA2 MET A 77 GLN A 79 5 3
HELIX 3 AA3 MET A 80 ARG A 91 1 12
HELIX 4 AA4 ALA A 94 GLN A 96 5 3
HELIX 5 AA5 HIS A 107 GLY A 112 1 6
HELIX 6 AA6 PRO A 113 GLY A 122 1 10
HELIX 7 AA7 ASN A 128 ARG A 137 1 10
HELIX 8 AA8 ARG A 222 ALA A 236 1 15
HELIX 9 AA9 HIS A 246 ASN A 251 5 6
HELIX 10 AB1 ASN A 253 ALA A 260 5 8
HELIX 11 AB2 THR A 266 ALA A 287 1 22
SHEET 1 AA1 7 LEU A 45 GLN A 46 0
SHEET 2 AA1 7 THR A 51 GLN A 53 -1 O GLN A 53 N LEU A 45
SHEET 3 AA1 7 LEU A 62 THR A 66 -1 O LEU A 63 N TRP A 52
SHEET 4 AA1 7 GLY A 69 LEU A 73 -1 O VAL A 71 N VAL A 64
SHEET 5 AA1 7 LEU A 98 LEU A 102 1 O LEU A 102 N LEU A 72
SHEET 6 AA1 7 HIS A 124 ALA A 127 1 O HIS A 124 N ILE A 101
SHEET 7 AA1 7 ARG A 158 ILE A 159 1 O ARG A 158 N ALA A 127
SHEET 1 AA2 5 VAL A 165 VAL A 168 0
SHEET 2 AA2 5 ILE A 171 PHE A 177 -1 O PHE A 173 N VAL A 166
SHEET 3 AA2 5 THR A 186 ARG A 194 -1 O ALA A 187 N HIS A 176
SHEET 4 AA2 5 LYS A 197 TYR A 203 -1 O TYR A 203 N TRP A 188
SHEET 5 AA2 5 LEU A 241 LEU A 243 1 O LEU A 241 N ALA A 202
SSBOND 1 CYS A 239 CYS A 267 1555 1555 2.04
LINK NE2 HIS A 105 CU CU A 302 1555 1555 2.04
LINK ND1 HIS A 107 CU CU A 302 1555 1555 2.18
LINK OD2 ASP A 109 CU CU A 301 1555 1555 2.32
LINK NE2 HIS A 110 CU CU A 301 1555 1555 2.08
LINK NE2 HIS A 181 CU CU A 302 1555 1555 2.21
LINK NE2 HIS A 246 CU CU A 301 1555 1555 2.23
LINK N8 3P7 A 300 CU CU A 301 1555 1555 2.62
LINK O82 3P7 A 300 CU CU A 301 1555 1555 2.33
LINK CU CU A 301 O HOH A 416 1555 1555 2.21
LINK CU CU A 302 O HOH A 416 1555 1555 2.08
SITE 1 AC1 14 TYR A 32 HIS A 107 ASP A 109 HIS A 110
SITE 2 AC1 14 PHE A 145 HIS A 181 SER A 206 SER A 208
SITE 3 AC1 14 PRO A 210 HIS A 246 CU A 301 CU A 302
SITE 4 AC1 14 HOH A 409 HOH A 416
SITE 1 AC2 6 ASP A 109 HIS A 110 HIS A 246 3P7 A 300
SITE 2 AC2 6 CU A 302 HOH A 416
SITE 1 AC3 6 HIS A 105 HIS A 107 HIS A 181 3P7 A 300
SITE 2 AC3 6 CU A 301 HOH A 416
SITE 1 AC4 8 ASP A 142 LEU A 143 HIS A 181 THR A 182
SITE 2 AC4 8 PRO A 183 HOH A 415 HOH A 420 HOH A 443
CRYST1 104.234 104.234 98.793 90.00 90.00 120.00 P 64 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009594 0.005539 0.000000 0.00000
SCALE2 0.000000 0.011078 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010122 0.00000