HEADER HYDROLASE 10-SEP-19 6UAC TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM TITLE 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH CADMIUM AND TITLE 3 HYDROLYZED MOXOLACTAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METALLO-BETA-LACTAMASE L1 (BETA-LACTAMASE TYPE II) COMPND 3 (EC 3.5.2.6) (PENICILLINASE); COMPND 4 CHAIN: A; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A); SOURCE 3 ORGANISM_TAXID: 522373; SOURCE 4 STRAIN: K279A; SOURCE 5 GENE: SMLT2667; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: GOLD KEYWDS LACTAM ANTIBIOTICS, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 OF INFECTIOUS DISEASES (CSGID) REVDAT 3 11-OCT-23 6UAC 1 COMPND HETNAM REVDAT 2 18-DEC-19 6UAC 1 REMARK REVDAT 1 25-SEP-19 6UAC 0 JRNL AUTH Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM JRNL TITL 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH CADMIUM AND JRNL TITL 3 HYDROLYZED MOXOLACTAM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 42223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4000 - 3.9400 1.00 2930 153 0.1354 0.1366 REMARK 3 2 3.9400 - 3.1300 1.00 2778 128 0.1454 0.1468 REMARK 3 3 3.1300 - 2.7300 1.00 2707 151 0.1664 0.1961 REMARK 3 4 2.7300 - 2.4800 1.00 2675 152 0.1655 0.2045 REMARK 3 5 2.4800 - 2.3100 1.00 2685 170 0.1579 0.1860 REMARK 3 6 2.3100 - 2.1700 1.00 2679 130 0.1472 0.1801 REMARK 3 7 2.1700 - 2.0600 1.00 2673 130 0.1533 0.1707 REMARK 3 8 2.0600 - 1.9700 1.00 2679 120 0.1500 0.1619 REMARK 3 9 1.9700 - 1.9000 1.00 2659 144 0.1533 0.1781 REMARK 3 10 1.9000 - 1.8300 1.00 2662 129 0.1486 0.1692 REMARK 3 11 1.8300 - 1.7700 1.00 2650 136 0.1555 0.2012 REMARK 3 12 1.7700 - 1.7200 1.00 2632 163 0.1648 0.2011 REMARK 3 13 1.7200 - 1.6800 1.00 2649 120 0.1831 0.1835 REMARK 3 14 1.6800 - 1.6400 0.99 2601 149 0.2116 0.2549 REMARK 3 15 1.6400 - 1.6000 0.93 2469 120 0.2437 0.2807 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.158 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.685 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2124 REMARK 3 ANGLE : 0.832 2905 REMARK 3 CHIRALITY : 0.052 321 REMARK 3 PLANARITY : 0.006 386 REMARK 3 DIHEDRAL : 15.787 1259 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5525 19.8059 8.2283 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.1946 REMARK 3 T33: 0.2096 T12: 0.0236 REMARK 3 T13: 0.0296 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.0285 L22: 0.1255 REMARK 3 L33: 0.0655 L12: -0.0192 REMARK 3 L13: -0.0465 L23: 0.0781 REMARK 3 S TENSOR REMARK 3 S11: 0.0744 S12: -0.0128 S13: 0.0053 REMARK 3 S21: -0.0320 S22: -0.0695 S23: 0.0255 REMARK 3 S31: 0.0306 S32: -0.0307 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1452 21.9455 8.7399 REMARK 3 T TENSOR REMARK 3 T11: 0.1509 T22: 0.1567 REMARK 3 T33: 0.1855 T12: 0.0131 REMARK 3 T13: 0.0188 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.0808 L22: 0.2341 REMARK 3 L33: 0.1564 L12: -0.1397 REMARK 3 L13: -0.0729 L23: 0.1336 REMARK 3 S TENSOR REMARK 3 S11: -0.0750 S12: 0.0019 S13: -0.0598 REMARK 3 S21: 0.0410 S22: 0.0061 S23: -0.0336 REMARK 3 S31: 0.0864 S32: -0.0278 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7169 27.5945 9.1215 REMARK 3 T TENSOR REMARK 3 T11: 0.1698 T22: 0.1993 REMARK 3 T33: 0.1763 T12: 0.0236 REMARK 3 T13: -0.0006 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0400 L22: 0.0893 REMARK 3 L33: 0.0165 L12: -0.0411 REMARK 3 L13: -0.0157 L23: -0.0119 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0590 S13: -0.0009 REMARK 3 S21: 0.0614 S22: -0.0182 S23: -0.0392 REMARK 3 S31: 0.0529 S32: 0.0406 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4558 35.9161 7.4525 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.1577 REMARK 3 T33: 0.1626 T12: 0.0137 REMARK 3 T13: 0.0057 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.0775 L22: 0.4558 REMARK 3 L33: 0.3345 L12: -0.1983 REMARK 3 L13: 0.0877 L23: -0.1390 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: 0.0069 S13: 0.0188 REMARK 3 S21: 0.0688 S22: -0.0489 S23: -0.0292 REMARK 3 S31: -0.0333 S32: -0.0414 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4471 28.6970 -5.5832 REMARK 3 T TENSOR REMARK 3 T11: 0.1584 T22: 0.1906 REMARK 3 T33: 0.1960 T12: 0.0558 REMARK 3 T13: 0.0520 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.1857 L22: 0.2531 REMARK 3 L33: 0.0786 L12: 0.2164 REMARK 3 L13: 0.0972 L23: 0.0740 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.1697 S13: -0.0362 REMARK 3 S21: -0.1190 S22: -0.0780 S23: -0.0914 REMARK 3 S31: 0.0713 S32: 0.0242 S33: -0.0332 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7310 36.0050 -5.2761 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.1942 REMARK 3 T33: 0.2047 T12: 0.0418 REMARK 3 T13: -0.0164 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.0536 L22: 0.0281 REMARK 3 L33: 0.0426 L12: 0.0099 REMARK 3 L13: 0.0155 L23: 0.0358 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.1870 S13: -0.0818 REMARK 3 S21: -0.1166 S22: 0.0039 S23: 0.1817 REMARK 3 S31: 0.0842 S32: 0.0390 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9853 32.4376 -11.6901 REMARK 3 T TENSOR REMARK 3 T11: 0.2104 T22: 0.2029 REMARK 3 T33: 0.1769 T12: 0.0516 REMARK 3 T13: 0.0103 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.0689 L22: 0.0937 REMARK 3 L33: 0.0974 L12: 0.0752 REMARK 3 L13: 0.0091 L23: -0.0256 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: 0.1902 S13: 0.0501 REMARK 3 S21: -0.2218 S22: -0.1259 S23: -0.0830 REMARK 3 S31: 0.0721 S32: 0.0464 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 245 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7969 15.5738 -6.3845 REMARK 3 T TENSOR REMARK 3 T11: 0.2596 T22: 0.1735 REMARK 3 T33: 0.1908 T12: 0.0471 REMARK 3 T13: 0.0120 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.0926 L22: 0.0226 REMARK 3 L33: 0.0646 L12: 0.0437 REMARK 3 L13: 0.0496 L23: 0.0314 REMARK 3 S TENSOR REMARK 3 S11: 0.1444 S12: 0.0491 S13: -0.0765 REMARK 3 S21: -0.0851 S22: -0.0947 S23: 0.0313 REMARK 3 S31: 0.1927 S32: -0.0230 S33: 0.0139 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 288 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8811 27.9526 -14.3626 REMARK 3 T TENSOR REMARK 3 T11: 0.2839 T22: 0.2402 REMARK 3 T33: 0.2017 T12: 0.0180 REMARK 3 T13: -0.0460 T23: -0.0857 REMARK 3 L TENSOR REMARK 3 L11: 0.1478 L22: 0.2586 REMARK 3 L33: 0.3850 L12: 0.0050 REMARK 3 L13: 0.0102 L23: -0.2516 REMARK 3 S TENSOR REMARK 3 S11: 0.1193 S12: 0.1228 S13: -0.0033 REMARK 3 S21: -0.2447 S22: -0.0626 S23: 0.1229 REMARK 3 S31: 0.3066 S32: -0.1888 S33: 0.0840 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244276. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42294 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.90100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDBID 6U0Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE PH 7.0, 20 % W/V REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.99167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.98333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.99167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.98333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.99167 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.98333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.99167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.98333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.16950 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.36022 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 32.99167 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 52.16950 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 90.36022 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 32.99167 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 552 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 736 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 THR A 289 REMARK 465 ARG A 290 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 156.43 68.13 REMARK 500 ALA A 106 52.70 -94.76 REMARK 500 ASP A 192 -165.73 -102.29 REMARK 500 TYR A 220 73.97 -150.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 403 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 105 NE2 REMARK 620 2 HIS A 107 ND1 90.6 REMARK 620 3 HIS A 181 NE2 90.1 105.9 REMARK 620 4 MX1 A 404 O32 171.9 96.2 83.8 REMARK 620 5 HOH A 501 O 103.9 101.4 149.2 79.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 402 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD2 REMARK 620 2 HIS A 110 NE2 90.4 REMARK 620 3 HIS A 246 NE2 91.4 95.1 REMARK 620 4 MX1 A 404 O3 169.5 99.9 89.4 REMARK 620 5 MX1 A 404 N1 105.5 161.9 93.1 64.1 REMARK 620 6 HOH A 501 O 75.8 99.8 160.3 100.5 76.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MX1 A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U0Y RELATED DB: PDB REMARK 900 THE SAME PROTEIN, APP-FORM REMARK 900 RELATED ID: 6U0Z RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE COMPLEX WITH PENICILLIN G REMARK 900 RELATED ID: 6U10 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE COMPLEX WITH CAPTOPRIL REMARK 900 RELATED ID: 6U13 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE COMPLEX WITH MOXOALACTAM REMARK 900 RELATED ID: 6U2Y RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH THE TWO ZN IONS REPLACED WITH TWO NI IONS, IN REMARK 900 THE COMPLEX WITH MOXALACTAM REMARK 900 RELATED ID: 6U2Z RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH THE TWO ZN IONS REPLACED WITH TWO COPPER IONS, REMARK 900 IN THE COMPLEX WITH MOXALACTAM REMARK 900 RELATED ID: 6UA1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, NO METAL BOUND REMARK 900 RELATED ID: CSGID-IDP97218 RELATED DB: TARGETTRACK DBREF 6UAC A 19 290 UNP B2FTM1 B2FTM1_STRMK 19 290 SEQADV 6UAC SER A 16 UNP B2FTM1 EXPRESSION TAG SEQADV 6UAC ASN A 17 UNP B2FTM1 EXPRESSION TAG SEQADV 6UAC ALA A 18 UNP B2FTM1 EXPRESSION TAG SEQRES 1 A 275 SER ASN ALA ALA SER ALA ALA GLU ALA PRO LEU PRO GLN SEQRES 2 A 275 LEU ARG ALA TYR THR VAL ASP ALA SER TRP LEU GLN PRO SEQRES 3 A 275 MET ALA PRO LEU GLN VAL ALA ASP HIS THR TRP GLN ILE SEQRES 4 A 275 GLY THR GLU ASP LEU THR ALA LEU LEU VAL GLN THR ALA SEQRES 5 A 275 GLU GLY ALA VAL LEU LEU ASP GLY GLY MET PRO GLN MET SEQRES 6 A 275 ALA GLY HIS LEU LEU ASP ASN MET LYS LEU ARG GLY VAL SEQRES 7 A 275 ALA PRO GLN ASP LEU ARG LEU ILE LEU LEU SER HIS ALA SEQRES 8 A 275 HIS ALA ASP HIS ALA GLY PRO VAL ALA GLU LEU LYS ARG SEQRES 9 A 275 ARG THR GLY ALA HIS VAL ALA ALA ASN ALA GLU THR ALA SEQRES 10 A 275 VAL LEU LEU ALA ARG GLY GLY SER ASN ASP LEU HIS PHE SEQRES 11 A 275 GLY ASP GLY ILE THR TYR PRO PRO ALA SER ALA ASP ARG SEQRES 12 A 275 ILE ILE MET ASP GLY GLU VAL VAL THR VAL GLY GLY ILE SEQRES 13 A 275 ALA PHE THR ALA HIS PHE MET PRO GLY HIS THR PRO GLY SEQRES 14 A 275 SER THR ALA TRP THR TRP THR ASP THR ARG ASP GLY LYS SEQRES 15 A 275 PRO VAL ARG ILE ALA TYR ALA ASP SER LEU SER ALA PRO SEQRES 16 A 275 GLY TYR GLN LEU LYS GLY ASN PRO ARG TYR PRO ARG LEU SEQRES 17 A 275 ILE GLU ASP TYR LYS ARG SER PHE ALA THR VAL ARG ALA SEQRES 18 A 275 LEU PRO CYS ASP LEU LEU LEU THR PRO HIS PRO GLY ALA SEQRES 19 A 275 SER ASN TRP ASN TYR ALA VAL GLY SER LYS ALA SER ALA SEQRES 20 A 275 GLU ALA LEU THR CYS ASN ALA TYR ALA ASP ALA ALA GLU SEQRES 21 A 275 LYS LYS PHE ASP ALA GLN LEU ALA ARG GLU THR ALA GLY SEQRES 22 A 275 THR ARG HET EDO A 401 4 HET CD A 402 1 HET CD A 403 1 HET MX1 A 404 30 HETNAM EDO 1,2-ETHANEDIOL HETNAM CD CADMIUM ION HETNAM MX1 (2R)-2-((R)-CARBOXY{[CARBOXY(4-HYDROXYPHENYL) HETNAM 2 MX1 ACETYL]AMINO}METHOXYMETHYL)-5-METHYLENE-5,6-DIHYDRO- HETNAM 3 MX1 2H-1,3-OXAZINE-4-CARBO XYLIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN MX1 MOXALACTAM (HYDROLYZED) FORMUL 2 EDO C2 H6 O2 FORMUL 3 CD 2(CD 2+) FORMUL 5 MX1 C18 H18 N2 O10 FORMUL 6 HOH *251(H2 O) HELIX 1 AA1 ASP A 35 GLN A 40 5 6 HELIX 2 AA2 MET A 77 GLN A 79 5 3 HELIX 3 AA3 MET A 80 ARG A 91 1 12 HELIX 4 AA4 ALA A 94 GLN A 96 5 3 HELIX 5 AA5 HIS A 107 GLY A 112 1 6 HELIX 6 AA6 PRO A 113 THR A 121 1 9 HELIX 7 AA7 ASN A 128 ARG A 137 1 10 HELIX 8 AA8 ARG A 222 ALA A 236 1 15 HELIX 9 AA9 HIS A 246 ASN A 251 5 6 HELIX 10 AB1 ASN A 253 ALA A 260 5 8 HELIX 11 AB2 THR A 266 ALA A 287 1 22 SHEET 1 AA1 7 LEU A 45 ALA A 48 0 SHEET 2 AA1 7 THR A 51 GLN A 53 -1 O GLN A 53 N LEU A 45 SHEET 3 AA1 7 LEU A 62 THR A 66 -1 O LEU A 63 N TRP A 52 SHEET 4 AA1 7 GLY A 69 LEU A 73 -1 O LEU A 73 N LEU A 62 SHEET 5 AA1 7 LEU A 98 LEU A 102 1 O LEU A 102 N LEU A 72 SHEET 6 AA1 7 HIS A 124 ALA A 127 1 O HIS A 124 N ILE A 101 SHEET 7 AA1 7 ARG A 158 ILE A 159 1 O ARG A 158 N ALA A 127 SHEET 1 AA2 5 VAL A 165 VAL A 168 0 SHEET 2 AA2 5 ILE A 171 PHE A 177 -1 O PHE A 173 N VAL A 166 SHEET 3 AA2 5 THR A 186 ARG A 194 -1 O ALA A 187 N HIS A 176 SHEET 4 AA2 5 LYS A 197 TYR A 203 -1 O TYR A 203 N TRP A 188 SHEET 5 AA2 5 LEU A 241 LEU A 243 1 O LEU A 243 N ALA A 202 LINK NE2 HIS A 105 CD CD A 403 1555 1555 2.44 LINK ND1 HIS A 107 CD CD A 403 1555 1555 2.32 LINK OD2 ASP A 109 CD CD A 402 1555 1555 2.40 LINK NE2 HIS A 110 CD CD A 402 1555 1555 2.36 LINK NE2 HIS A 181 CD CD A 403 1555 1555 2.31 LINK NE2 HIS A 246 CD CD A 402 1555 1555 2.35 LINK CD CD A 402 O3 MX1 A 404 1555 1555 2.48 LINK CD CD A 402 N1 MX1 A 404 1555 1555 2.54 LINK CD CD A 402 O HOH A 501 1555 1555 2.42 LINK CD CD A 403 O32 MX1 A 404 1555 1555 2.46 LINK CD CD A 403 O HOH A 501 1555 1555 2.32 SITE 1 AC1 2 GLY A 211 TYR A 212 SITE 1 AC2 6 ASP A 109 HIS A 110 HIS A 246 CD A 403 SITE 2 AC2 6 MX1 A 404 HOH A 501 SITE 1 AC3 6 HIS A 105 HIS A 107 HIS A 181 CD A 402 SITE 2 AC3 6 MX1 A 404 HOH A 501 SITE 1 AC4 17 TYR A 32 TRP A 38 HIS A 107 PHE A 145 SITE 2 AC4 17 ILE A 149 HIS A 181 SER A 206 SER A 208 SITE 3 AC4 17 PRO A 210 HIS A 246 CD A 402 CD A 403 SITE 4 AC4 17 HOH A 501 HOH A 525 HOH A 560 HOH A 600 SITE 5 AC4 17 HOH A 655 CRYST1 104.339 104.339 98.975 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009584 0.005533 0.000000 0.00000 SCALE2 0.000000 0.011067 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010104 0.00000