HEADER HYDROLASE 10-SEP-19 6UAI TITLE IMIDAZOLE-TRIGGERED RAS-SPECIFIC SUBTILISIN SUBT_BACAM COMPLEXED WITH TITLE 2 YSAM PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUBTILISIN BPN'; COMPND 3 CHAIN: S; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: YSAM PEPTIDE; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS AMYLOLIQUEFACIENS; SOURCE 3 ORGANISM_TAXID: 1390; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606 KEYWDS ENGINEERED PROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.A.TOTH,P.N.BRYAN,J.ORBAN REVDAT 3 11-OCT-23 6UAI 1 REMARK REVDAT 2 31-MAR-21 6UAI 1 JRNL REVDAT 1 16-SEP-20 6UAI 0 JRNL AUTH Y.CHEN,E.A.TOTH,B.RUAN,E.J.CHOI,R.SIMMERMAN,Y.CHEN,Y.HE, JRNL AUTH 2 R.WANG,R.GODOY-RUIZ,H.KING,G.CUSTER,D.TRAVIS GALLAGHER, JRNL AUTH 3 D.A.ROZAK,M.SOLOMON,S.MURO,D.J.WEBER,J.ORBAN,T.R.FUERST, JRNL AUTH 4 P.N.BRYAN JRNL TITL ENGINEERING SUBTILISIN PROTEASES THAT SPECIFICALLY DEGRADE JRNL TITL 2 ACTIVE RAS. JRNL REF COMMUN BIOL V. 4 299 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 33674772 JRNL DOI 10.1038/S42003-021-01818-7 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.110 REMARK 3 R VALUE (WORKING SET) : 0.109 REMARK 3 FREE R VALUE : 0.125 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3448 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4859 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.0920 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.1160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1873 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 307 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.030 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.028 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.973 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2058 ; 0.021 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1893 ; 0.036 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2832 ; 2.176 ; 1.623 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4427 ; 2.759 ; 1.564 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ;10.735 ; 5.220 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;37.814 ;25.161 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 289 ;11.610 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 4.833 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.142 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2642 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 376 ; 0.012 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3951 ;15.530 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6UAI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 58.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 22.60 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1SPB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.0, 0.2 M NACL, 20% PEG REMARK 280 6K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.58500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.32000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.32000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.29250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.32000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.32000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.87750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.32000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.32000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.29250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.32000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.32000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 93.87750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.58500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: S, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS S 2 CE NZ REMARK 470 LYS S 141 CD CE NZ REMARK 470 GLN S 185 CD OE1 NE2 REMARK 470 LYS S 213 CE NZ REMARK 470 LYS S 256 CD CE NZ REMARK 470 LYS S 265 NZ REMARK 470 GLN S 275 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP S 32 -147.42 -162.46 REMARK 500 SER S 62 -61.67 -106.35 REMARK 500 SER S 63 -23.96 117.98 REMARK 500 SER S 63 -33.69 130.20 REMARK 500 SER S 159 61.71 -150.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH S 701 DISTANCE = 5.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA S 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER S 62 OG REMARK 620 2 HOH S 454 O 118.9 REMARK 620 3 HOH S 670 O 142.8 88.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA S 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER S 62 OG REMARK 620 2 HOH S 454 O 102.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA S 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA S 169 O REMARK 620 2 TYR S 171 O 109.0 REMARK 620 3 VAL S 174 O 110.5 95.3 REMARK 620 4 HOH S 408 O 101.4 75.4 148.1 REMARK 620 5 HOH S 410 O 117.0 128.1 90.2 73.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA S 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA S 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL S 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO S 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO S 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO S 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO S 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG S 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U9L RELATED DB: PDB REMARK 900 6U9L IS THE FREE PROTEASE DBREF 6UAI S 1 275 PDB 6UAI 6UAI 1 275 DBREF 6UAI B 277 280 PDB 6UAI 6UAI 277 280 SEQRES 1 S 266 ALA LYS CYS VAL SER TYR GLY VAL ALA GLN ILE LYS ALA SEQRES 2 S 266 PRO ALA LEU HIS SER GLN GLY TYR THR GLY SER ASN VAL SEQRES 3 S 266 LYS VAL ALA ILE LEU ASP THR GLY ILE ASP SER SER HIS SEQRES 4 S 266 PRO ASP LEU ASN VAL ALA GLY GLY ALA SER PHE VAL PRO SEQRES 5 S 266 SER GLU THR ASN PRO PHE GLN ASP ASN SER SER GLY GLY SEQRES 6 S 266 THR HIS ILE ALA GLY THR VAL LEU ALA VAL ALA PRO SER SEQRES 7 S 266 ALA SER LEU TYR ALA VAL LYS VAL LEU GLY ALA ASP GLY SEQRES 8 S 266 LYS GLY GLN ALA SER TRP ILE ILE ASN GLY ILE GLU TRP SEQRES 9 S 266 ALA ILE ALA ASN ASN MET ASP VAL ILE ASN MET SER LEU SEQRES 10 S 266 GLY SER PRO SER GLY SER ALA ALA VAL LYS ALA ALA VAL SEQRES 11 S 266 ASP LYS ALA VAL ALA SER GLY VAL VAL VAL VAL ALA ALA SEQRES 12 S 266 ALA GLY ASN SER GLY THR SER GLY SER SER SER THR VAL SEQRES 13 S 266 THR TYR PRO ALA LYS TYR PRO SER VAL ILE ALA VAL GLY SEQRES 14 S 266 ALA VAL ASP SER SER ASN GLN ARG ALA PRO PHE SER SER SEQRES 15 S 266 VAL GLY PRO GLU LEU ASP VAL MET ALA PRO GLY VAL SER SEQRES 16 S 266 ILE CYS SER THR LEU PRO GLY GLY LYS TYR GLY ALA LEU SEQRES 17 S 266 SER GLY THR SER MET ALA SER PRO HIS VAL ALA GLY ALA SEQRES 18 S 266 ALA ALA LEU ILE LEU SER LYS HIS PRO ASN TRP THR ASN SEQRES 19 S 266 THR GLN VAL ARG SER SER LEU GLU ASN THR ALA THR LYS SEQRES 20 S 266 LEU GLY ASP SER PHE TYR TYR GLY LYS GLY LEU ILE ASN SEQRES 21 S 266 VAL GLU ALA ALA ALA GLN SEQRES 1 B 4 TYR SER ALA MET HET NA S 301 1 HET NA S 302 2 HET CL S 303 1 HET EDO S 304 4 HET EDO S 305 4 HET EDO S 306 8 HET EDO S 307 4 HET PEG S 308 7 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NA 2(NA 1+) FORMUL 5 CL CL 1- FORMUL 6 EDO 4(C2 H6 O2) FORMUL 10 PEG C4 H10 O3 FORMUL 11 HOH *307(H2 O) HELIX 1 AA1 TYR S 6 ILE S 11 1 6 HELIX 2 AA2 LYS S 12 GLY S 20 1 9 HELIX 3 AA3 SER S 63 ALA S 85 1 14 HELIX 4 AA4 GLN S 103 ASN S 117 1 15 HELIX 5 AA5 SER S 132 SER S 145 1 14 HELIX 6 AA6 GLY S 219 HIS S 238 1 20 HELIX 7 AA7 THR S 242 THR S 253 1 12 HELIX 8 AA8 ASP S 259 GLY S 264 1 6 HELIX 9 AA9 ASN S 269 ALA S 274 1 6 SHEET 1 AA1 7 GLY S 46 SER S 49 0 SHEET 2 AA1 7 SER S 89 LYS S 94 1 O LYS S 94 N ALA S 48 SHEET 3 AA1 7 LYS S 27 ASP S 32 1 N VAL S 28 O SER S 89 SHEET 4 AA1 7 VAL S 121 MET S 124 1 O VAL S 121 N ALA S 29 SHEET 5 AA1 7 VAL S 148 ALA S 152 1 O VAL S 150 N ILE S 122 SHEET 6 AA1 7 ILE S 175 VAL S 180 1 O ILE S 175 N ALA S 151 SHEET 7 AA1 7 VAL S 198 PRO S 201 1 O VAL S 198 N GLY S 178 SHEET 1 AA2 2 LEU S 126 GLY S 127 0 SHEET 2 AA2 2 SER B 278 ALA B 279 -1 O SER B 278 N GLY S 127 SHEET 1 AA3 2 ILE S 205 LEU S 209 0 SHEET 2 AA3 2 LYS S 213 LEU S 217 -1 O LEU S 217 N ILE S 205 SSBOND 1 CYS S 3 CYS S 206 1555 1555 2.33 LINK OG ASER S 62 NA A NA S 302 1555 1555 2.71 LINK OG BSER S 62 NA B NA S 302 1555 1555 2.52 LINK O ALA S 169 NA NA S 301 1555 1555 2.47 LINK O TYR S 171 NA NA S 301 1555 1555 2.14 LINK O VAL S 174 NA NA S 301 1555 1555 2.34 LINK NA NA S 301 O AHOH S 408 1555 1555 2.64 LINK NA NA S 301 O HOH S 410 1555 1555 2.32 LINK NA A NA S 302 O HOH S 454 1555 1555 2.61 LINK NA B NA S 302 O HOH S 454 1555 1555 2.65 LINK NA A NA S 302 O HOH S 670 1555 1555 2.67 CISPEP 1 TYR S 167 PRO S 168 0 13.51 SITE 1 AC1 5 ALA S 169 TYR S 171 VAL S 174 HOH S 408 SITE 2 AC1 5 HOH S 410 SITE 1 AC2 7 ALA B 279 THR S 33 SER S 62 GLY S 64 SITE 2 AC2 7 GLY S 100 HOH S 454 HOH S 670 SITE 1 AC3 6 TYR B 277 GLY S 131 SER S 132 VAL S 135 SITE 2 AC3 6 TYR S 167 TYR S 171 SITE 1 AC4 8 ASN S 118 MET S 119 SER S 145 GLY S 146 SITE 2 AC4 8 HOH S 426 HOH S 473 HOH S 488 HOH S 540 SITE 1 AC5 5 GLN S 19 TYR S 21 ASN S 56 PHE S 58 SITE 2 AC5 5 HOH S 526 SITE 1 AC6 7 ASP S 181 SER S 182 SER S 183 VAL S 203 SITE 2 AC6 7 HOH S 414 HOH S 497 HOH S 583 SITE 1 AC7 3 ASN S 25 PRO S 52 ARG S 186 SITE 1 AC8 6 TRP S 241 GLN S 245 SER S 248 ASN S 252 SITE 2 AC8 6 HOH S 404 HOH S 655 CRYST1 58.640 58.640 125.170 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017053 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007989 0.00000