HEADER SIGNALING PROTEIN 11-SEP-19 6UBH TITLE STRUCTURE OF THE MM7 ERBIN PDZ VARIANT IN COMPLEX WITH A HIGH-AFFINITY TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ERBIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DENSIN-180-LIKE PROTEIN,ERBB2-INTERACTING PROTEIN,PROTEIN COMPND 5 LAP2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDE; COMPND 10 CHAIN: E, F, G, H; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBIN, ERBB2IP, KIAA1225, LAP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHH0103; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS PHAGE DISPLAY, DIRECTED EVOLUTION, -2 POSITION, SPECIFICITY, PHAGE KEYWDS 2 LIBRARY, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.U.SINGER,J.TEYRA,M.MCLAUGHLIN,A.ERNST,F.SICHERI,S.S.SIDHU REVDAT 3 11-OCT-23 6UBH 1 REMARK REVDAT 2 16-FEB-22 6UBH 1 JRNL REMARK REVDAT 1 29-JUL-20 6UBH 0 JRNL AUTH J.TEYRA,M.MCLAUGHLIN,A.SINGER,A.KELIL,A.ERNST,F.SICHERI, JRNL AUTH 2 S.S.SIDHU JRNL TITL COMPREHENSIVE ASSESSMENT OF THE RELATIONSHIP BETWEEN SITE -2 JRNL TITL 2 SPECIFICITY AND HELIX ALPHA 2 IN THE ERBIN PDZ DOMAIN. JRNL REF J.MOL.BIOL. V. 433 67115 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 34171344 JRNL DOI 10.1016/J.JMB.2021.167115 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 81.5 REMARK 3 NUMBER OF REFLECTIONS : 23129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.8530 - 1.8000 0.82 1931 137 0.2972 0.2748 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UBH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26382 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.3 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.02100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.05300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 12.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UBG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG8K, 100 MM SODIUM ACETATE PH REMARK 280 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 19 REMARK 465 VAL A 111 REMARK 465 SER A 112 REMARK 465 SER A 113 REMARK 465 VAL B 111 REMARK 465 SER B 112 REMARK 465 SER B 113 REMARK 465 VAL C 111 REMARK 465 SER C 112 REMARK 465 SER C 113 REMARK 465 VAL D 111 REMARK 465 SER D 112 REMARK 465 SER D 113 REMARK 465 LYS E -4 REMARK 465 ASN E -3 REMARK 465 LYS F -4 REMARK 465 ASN F -3 REMARK 465 LYS G -4 REMARK 465 ASN G -3 REMARK 465 LYS H -4 REMARK 465 ASN H -3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 20 OG REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 GLU B 28 CG CD OE1 OE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 GLU C 110 CG CD OE1 OE2 REMARK 470 GLU D 110 CG CD OE1 OE2 REMARK 470 PHE E -2 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE F -2 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE G -2 CG CD1 CD2 CE1 CE2 CZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET C 21 N CA C O CB CG SD REMARK 480 MET C 21 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER C 19 O HOH C 301 2.14 REMARK 500 O HOH D 309 O HOH H 102 2.15 REMARK 500 O VAL G 2 O HOH G 101 2.16 REMARK 500 O PHE C 48 O HOH C 302 2.16 REMARK 500 O HOH D 367 O HOH D 375 2.17 REMARK 500 O HOH B 244 O HOH B 245 2.18 REMARK 500 O HOH D 358 O HOH D 373 2.18 REMARK 500 O HOH A 327 O HOH A 353 2.18 REMARK 500 O HOH B 262 O HOH B 268 2.19 REMARK 500 OG SER C 94 O HOH C 303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 68.25 -153.70 REMARK 500 PHE A 48 -60.41 -107.62 REMARK 500 LYS A 68 -0.50 62.96 REMARK 500 ASN A 101 -109.98 59.62 REMARK 500 ASP B 30 69.26 -153.69 REMARK 500 PHE B 48 -60.36 -106.63 REMARK 500 ASN B 101 -108.78 60.02 REMARK 500 ASP C 30 68.56 -152.80 REMARK 500 ASN C 101 -111.44 61.54 REMARK 500 ASP D 30 68.38 -153.13 REMARK 500 PHE D 48 -61.77 -106.29 REMARK 500 ASN D 101 -112.06 61.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 378 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH D 379 DISTANCE = 6.54 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 OD1 REMARK 620 2 HOH A 350 O 40.6 REMARK 620 3 GLU C 104 OE1 43.0 2.5 REMARK 620 4 GLU C 104 OE2 41.7 1.3 1.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 51 O REMARK 620 2 HOH A 382 O 120.0 REMARK 620 3 SER C 20 O 86.4 152.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 94 OG REMARK 620 2 GLN D 71 OE1 91.4 REMARK 620 3 HOH D 313 O 92.1 6.4 REMARK 620 4 HOH D 333 O 91.7 3.1 3.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N7T RELATED DB: PDB REMARK 900 RELATED ID: 6Q0N RELATED DB: PDB REMARK 900 RELATED ID: 6Q0M RELATED DB: PDB REMARK 900 RELATED ID: 6Q0U RELATED DB: PDB DBREF 6UBH A 22 113 UNP Q96RT1 ERBIN_HUMAN 1328 1419 DBREF 6UBH B 22 113 UNP Q96RT1 ERBIN_HUMAN 1328 1419 DBREF 6UBH C 22 113 UNP Q96RT1 ERBIN_HUMAN 1328 1419 DBREF 6UBH D 22 113 UNP Q96RT1 ERBIN_HUMAN 1328 1419 DBREF 6UBH E -4 2 PDB 6UBH 6UBH -4 2 DBREF 6UBH F -4 2 PDB 6UBH 6UBH -4 2 DBREF 6UBH G -4 2 PDB 6UBH 6UBH -4 2 DBREF 6UBH H -4 2 PDB 6UBH 6UBH -4 2 SEQADV 6UBH SER A 19 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH SER A 20 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET A 21 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET A 89 UNP Q96RT1 HIS 1395 ENGINEERED MUTATION SEQADV 6UBH SER B 19 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH SER B 20 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET B 21 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET B 89 UNP Q96RT1 HIS 1395 ENGINEERED MUTATION SEQADV 6UBH SER C 19 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH SER C 20 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET C 21 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET C 89 UNP Q96RT1 HIS 1395 ENGINEERED MUTATION SEQADV 6UBH SER D 19 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH SER D 20 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET D 21 UNP Q96RT1 EXPRESSION TAG SEQADV 6UBH MET D 89 UNP Q96RT1 HIS 1395 ENGINEERED MUTATION SEQRES 1 A 95 SER SER MET GLU ILE ARG VAL ARG VAL GLU LYS ASP PRO SEQRES 2 A 95 GLU LEU GLY PHE SER ILE SER GLY GLY VAL GLY GLY ARG SEQRES 3 A 95 GLY ASN PRO PHE ARG PRO ASP ASP ASP GLY ILE PHE VAL SEQRES 4 A 95 THR ARG VAL GLN PRO GLU GLY PRO ALA SER LYS LEU LEU SEQRES 5 A 95 GLN PRO GLY ASP LYS ILE ILE GLN ALA ASN GLY TYR SER SEQRES 6 A 95 PHE ILE ASN ILE GLU MET GLY GLN ALA VAL SER LEU LEU SEQRES 7 A 95 LYS THR PHE GLN ASN THR VAL GLU LEU ILE ILE VAL ARG SEQRES 8 A 95 GLU VAL SER SER SEQRES 1 B 95 SER SER MET GLU ILE ARG VAL ARG VAL GLU LYS ASP PRO SEQRES 2 B 95 GLU LEU GLY PHE SER ILE SER GLY GLY VAL GLY GLY ARG SEQRES 3 B 95 GLY ASN PRO PHE ARG PRO ASP ASP ASP GLY ILE PHE VAL SEQRES 4 B 95 THR ARG VAL GLN PRO GLU GLY PRO ALA SER LYS LEU LEU SEQRES 5 B 95 GLN PRO GLY ASP LYS ILE ILE GLN ALA ASN GLY TYR SER SEQRES 6 B 95 PHE ILE ASN ILE GLU MET GLY GLN ALA VAL SER LEU LEU SEQRES 7 B 95 LYS THR PHE GLN ASN THR VAL GLU LEU ILE ILE VAL ARG SEQRES 8 B 95 GLU VAL SER SER SEQRES 1 C 95 SER SER MET GLU ILE ARG VAL ARG VAL GLU LYS ASP PRO SEQRES 2 C 95 GLU LEU GLY PHE SER ILE SER GLY GLY VAL GLY GLY ARG SEQRES 3 C 95 GLY ASN PRO PHE ARG PRO ASP ASP ASP GLY ILE PHE VAL SEQRES 4 C 95 THR ARG VAL GLN PRO GLU GLY PRO ALA SER LYS LEU LEU SEQRES 5 C 95 GLN PRO GLY ASP LYS ILE ILE GLN ALA ASN GLY TYR SER SEQRES 6 C 95 PHE ILE ASN ILE GLU MET GLY GLN ALA VAL SER LEU LEU SEQRES 7 C 95 LYS THR PHE GLN ASN THR VAL GLU LEU ILE ILE VAL ARG SEQRES 8 C 95 GLU VAL SER SER SEQRES 1 D 95 SER SER MET GLU ILE ARG VAL ARG VAL GLU LYS ASP PRO SEQRES 2 D 95 GLU LEU GLY PHE SER ILE SER GLY GLY VAL GLY GLY ARG SEQRES 3 D 95 GLY ASN PRO PHE ARG PRO ASP ASP ASP GLY ILE PHE VAL SEQRES 4 D 95 THR ARG VAL GLN PRO GLU GLY PRO ALA SER LYS LEU LEU SEQRES 5 D 95 GLN PRO GLY ASP LYS ILE ILE GLN ALA ASN GLY TYR SER SEQRES 6 D 95 PHE ILE ASN ILE GLU MET GLY GLN ALA VAL SER LEU LEU SEQRES 7 D 95 LYS THR PHE GLN ASN THR VAL GLU LEU ILE ILE VAL ARG SEQRES 8 D 95 GLU VAL SER SER SEQRES 1 E 7 LYS ASN PHE ASP PHE TRP VAL SEQRES 1 F 7 LYS ASN PHE ASP PHE TRP VAL SEQRES 1 G 7 LYS ASN PHE ASP PHE TRP VAL SEQRES 1 H 7 LYS ASN PHE ASP PHE TRP VAL HET NA A 201 1 HET NA C 201 1 HET NA D 201 1 HETNAM NA SODIUM ION FORMUL 9 NA 3(NA 1+) FORMUL 12 HOH *327(H2 O) HELIX 1 AA1 GLU A 88 PHE A 99 1 12 HELIX 2 AA2 GLU B 88 PHE B 99 1 12 HELIX 3 AA3 GLU C 88 PHE C 99 1 12 HELIX 4 AA4 GLU D 88 PHE D 99 1 12 SHEET 1 AA1 4 MET A 21 GLU A 28 0 SHEET 2 AA1 4 THR A 102 ARG A 109 -1 O LEU A 105 N VAL A 25 SHEET 3 AA1 4 LYS A 75 ALA A 79 -1 N GLN A 78 O ILE A 106 SHEET 4 AA1 4 TYR A 82 SER A 83 -1 O TYR A 82 N ALA A 79 SHEET 1 AA2 6 MET A 21 GLU A 28 0 SHEET 2 AA2 6 THR A 102 ARG A 109 -1 O LEU A 105 N VAL A 25 SHEET 3 AA2 6 LYS A 75 ALA A 79 -1 N GLN A 78 O ILE A 106 SHEET 4 AA2 6 ILE A 55 VAL A 60 -1 N ILE A 55 O ILE A 76 SHEET 5 AA2 6 PHE A 35 GLY A 39 -1 N SER A 38 O PHE A 56 SHEET 6 AA2 6 PHE E 0 TRP E 1 -1 O PHE E 0 N ILE A 37 SHEET 1 AA3 4 MET B 21 GLU B 28 0 SHEET 2 AA3 4 THR B 102 ARG B 109 -1 O ILE B 107 N ILE B 23 SHEET 3 AA3 4 LYS B 75 ALA B 79 -1 N GLN B 78 O ILE B 106 SHEET 4 AA3 4 TYR B 82 SER B 83 -1 O TYR B 82 N ALA B 79 SHEET 1 AA4 6 MET B 21 GLU B 28 0 SHEET 2 AA4 6 THR B 102 ARG B 109 -1 O ILE B 107 N ILE B 23 SHEET 3 AA4 6 LYS B 75 ALA B 79 -1 N GLN B 78 O ILE B 106 SHEET 4 AA4 6 ILE B 55 VAL B 60 -1 N ILE B 55 O ILE B 76 SHEET 5 AA4 6 PHE B 35 GLY B 39 -1 N SER B 38 O PHE B 56 SHEET 6 AA4 6 PHE F 0 TRP F 1 -1 O PHE F 0 N ILE B 37 SHEET 1 AA5 4 MET C 21 GLU C 28 0 SHEET 2 AA5 4 THR C 102 ARG C 109 -1 O LEU C 105 N VAL C 25 SHEET 3 AA5 4 LYS C 75 ALA C 79 -1 N GLN C 78 O ILE C 106 SHEET 4 AA5 4 TYR C 82 SER C 83 -1 O TYR C 82 N ALA C 79 SHEET 1 AA6 6 MET C 21 GLU C 28 0 SHEET 2 AA6 6 THR C 102 ARG C 109 -1 O LEU C 105 N VAL C 25 SHEET 3 AA6 6 LYS C 75 ALA C 79 -1 N GLN C 78 O ILE C 106 SHEET 4 AA6 6 ILE C 55 VAL C 60 -1 N ILE C 55 O ILE C 76 SHEET 5 AA6 6 PHE C 35 GLY C 39 -1 N SER C 36 O ARG C 59 SHEET 6 AA6 6 PHE G 0 TRP G 1 -1 O PHE G 0 N ILE C 37 SHEET 1 AA7 4 MET D 21 GLU D 28 0 SHEET 2 AA7 4 THR D 102 ARG D 109 -1 O LEU D 105 N VAL D 25 SHEET 3 AA7 4 LYS D 75 ALA D 79 -1 N GLN D 78 O ILE D 106 SHEET 4 AA7 4 TYR D 82 SER D 83 -1 O TYR D 82 N ALA D 79 SHEET 1 AA8 6 MET D 21 GLU D 28 0 SHEET 2 AA8 6 THR D 102 ARG D 109 -1 O LEU D 105 N VAL D 25 SHEET 3 AA8 6 LYS D 75 ALA D 79 -1 N GLN D 78 O ILE D 106 SHEET 4 AA8 6 ILE D 55 VAL D 60 -1 N ILE D 55 O ILE D 76 SHEET 5 AA8 6 PHE D 35 GLY D 39 -1 N SER D 38 O PHE D 56 SHEET 6 AA8 6 PHE H 0 VAL H 2 -1 O VAL H 2 N PHE D 35 LINK OD1 ASP A 30 NA NA C 201 1555 1664 2.62 LINK O ASP A 51 NA NA A 201 1555 1555 2.42 LINK NA NA A 201 O HOH A 382 1555 1555 3.05 LINK NA NA A 201 O SER C 20 1555 1555 2.86 LINK O HOH A 350 NA NA C 201 1446 1555 3.12 LINK OG SER C 94 NA NA D 201 1555 1455 2.40 LINK OE1 GLU C 104 NA NA C 201 1555 1555 2.50 LINK OE2 GLU C 104 NA NA C 201 1555 1555 3.03 LINK OE1 GLN D 71 NA NA D 201 1555 1555 2.35 LINK NA NA D 201 O HOH D 313 1555 1555 2.83 LINK NA NA D 201 O HOH D 333 1555 1555 2.35 CISPEP 1 ASP A 30 PRO A 31 0 -5.86 CISPEP 2 ASP B 30 PRO B 31 0 -6.25 CISPEP 3 ASP C 30 PRO C 31 0 -6.63 CISPEP 4 ASP D 30 PRO D 31 0 -6.68 SITE 1 AC1 3 ASP A 51 HOH A 382 SER C 20 SITE 1 AC2 4 ASP A 30 ARG C 24 ARG C 26 GLU C 104 SITE 1 AC3 4 SER C 94 GLN D 71 HOH D 313 HOH D 333 CRYST1 39.000 39.010 58.380 72.55 72.61 96.06 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025641 0.002722 -0.009585 0.00000 SCALE2 0.000000 0.025779 -0.009608 0.00000 SCALE3 0.000000 0.000000 0.019156 0.00000