HEADER VIRUS 12-SEP-19 6UBM TITLE AAV8 BACULOVIRUS-SF9 PRODUCED, EMPTY CAPSID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ADENO-ASSOCIATED VIRUS - 8; SOURCE 3 ORGANISM_TAXID: 202813; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ADENO-ASSOCIATED VIRUS, AAV, GENE THERAPY VECTOR, POST TRANSLATIONAL KEYWDS 2 MODIFICATION, CAPSID, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR N.K.PAULK,N.POWELEIT REVDAT 3 20-MAR-24 6UBM 1 JRNL REMARK REVDAT 2 14-OCT-20 6UBM 1 JRNL REVDAT 1 03-JUN-20 6UBM 0 JRNL AUTH N.G.RUMACHIK,S.A.MALAKER,N.POWELEIT,L.H.MAYNARD,C.M.ADAMS, JRNL AUTH 2 R.D.LEIB,G.CIROLIA,D.THOMAS,S.STAMNES,K.HOLT,P.SINN,A.P.MAY, JRNL AUTH 3 N.K.PAULK JRNL TITL METHODS MATTER: STANDARD PRODUCTION PLATFORMS FOR JRNL TITL 2 RECOMBINANT AAV PRODUCE CHEMICALLY AND FUNCTIONALLY DISTINCT JRNL TITL 3 VECTORS. JRNL REF TO BE PUBLISHED V. 18 98 2020 JRNL REFN ESSN 2329-0501 JRNL PMID 32995354 JRNL DOI 10.1016/J.OMTM.2020.05.018 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CISTEM, UCSF CHIMERA, PHENIX, REMARK 3 CISTEM, CISTEM, CISTEM, CISTEM REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 2395 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6UBM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244060. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ADENO-ASSOCIATED VIRUS - 8 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : RECOMBINANT AAV8 VECTOR, REMARK 245 PRODUCED IN SUSPENSION SPODOPTERA FRUGIPERDA (SF9) CELLS REMARK 245 INFECTED WITH LIVE BACULOVIRUS EXPRESSING AAV COMPONENTS. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 395 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6600.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.499371 -0.310981 -0.808653 442.73427 REMARK 350 BIOMT2 2 -0.306420 0.809642 -0.500586 272.52427 REMARK 350 BIOMT3 2 0.810392 0.497765 0.309021 -170.01740 REMARK 350 BIOMT1 3 -0.310664 -0.809598 -0.498035 716.55800 REMARK 350 BIOMT2 3 -0.806779 0.501636 -0.312200 442.61730 REMARK 350 BIOMT3 3 0.502589 0.304815 -0.809007 271.88524 REMARK 350 BIOMT1 4 -0.310664 -0.806779 0.502589 443.05611 REMARK 350 BIOMT2 4 -0.809598 0.501636 0.304815 275.21630 REMARK 350 BIOMT3 4 -0.498035 -0.312200 -0.809007 715.01349 REMARK 350 BIOMT1 5 0.499371 -0.306420 0.810392 0.19891 REMARK 350 BIOMT2 5 -0.310981 0.809642 0.497765 1.66377 REMARK 350 BIOMT3 5 -0.808653 -0.500586 0.309021 546.97917 REMARK 350 BIOMT1 6 0.305827 -0.808423 0.502914 274.52709 REMARK 350 BIOMT2 6 -0.808423 -0.499514 -0.311349 717.05235 REMARK 350 BIOMT3 6 0.502914 -0.311349 -0.806312 439.83019 REMARK 350 BIOMT1 7 0.807995 -0.499306 0.312789 104.10798 REMARK 350 BIOMT2 7 -0.502956 -0.308002 0.807570 275.94075 REMARK 350 BIOMT3 7 -0.306885 -0.809832 -0.499993 714.72455 REMARK 350 BIOMT1 8 0.809968 -0.499835 -0.306783 272.58249 REMARK 350 BIOMT2 8 0.497665 0.309019 0.810455 -167.97428 REMARK 350 BIOMT3 8 -0.310292 -0.809118 0.499046 443.16460 REMARK 350 BIOMT1 9 0.309019 -0.809279 -0.499575 547.12458 REMARK 350 BIOMT2 9 0.810616 0.498847 -0.306681 -1.21726 REMARK 350 BIOMT3 9 0.497402 -0.310193 0.810168 0.43696 REMARK 350 BIOMT1 10 -0.002558 -0.999996 0.000845 548.32641 REMARK 350 BIOMT2 10 0.003410 -0.000854 -0.999994 545.75928 REMARK 350 BIOMT3 10 0.999991 -0.002555 0.003412 -1.62382 REMARK 350 BIOMT1 11 -0.808953 0.500466 0.308430 274.42868 REMARK 350 BIOMT2 11 0.500466 0.311018 0.807961 -168.60956 REMARK 350 BIOMT3 11 0.308430 0.807961 -0.502065 103.60387 REMARK 350 BIOMT1 12 -0.307371 0.810293 0.498947 0.22819 REMARK 350 BIOMT2 12 0.809382 0.498353 -0.310718 0.35633 REMARK 350 BIOMT3 12 -0.500424 0.308333 -0.809016 545.70527 REMARK 350 BIOMT1 13 0.002561 0.999993 -0.002880 0.13949 REMARK 350 BIOMT2 13 -0.000326 -0.002880 -0.999996 547.33806 REMARK 350 BIOMT3 13 -0.999997 0.002562 0.000319 545.72544 REMARK 350 BIOMT1 14 -0.307473 0.807406 -0.503544 274.28515 REMARK 350 BIOMT2 14 -0.809669 -0.499993 -0.307314 716.42548 REMARK 350 BIOMT3 14 -0.499896 0.313213 0.807466 103.63650 REMARK 350 BIOMT1 15 -0.809016 0.498681 -0.311143 443.80519 REMARK 350 BIOMT2 15 -0.500163 -0.305994 0.810065 273.94552 REMARK 350 BIOMT3 15 0.308756 0.810977 0.496976 -169.60966 REMARK 350 BIOMT1 16 -0.496874 0.307957 -0.811344 546.86633 REMARK 350 BIOMT2 16 0.307957 -0.811504 -0.496613 547.16388 REMARK 350 BIOMT3 16 -0.811344 -0.496613 0.308377 546.80350 REMARK 350 BIOMT1 17 -0.999995 -0.000006 -0.003083 548.75166 REMARK 350 BIOMT2 17 -0.000006 -0.999993 0.003734 546.78532 REMARK 350 BIOMT3 17 -0.003083 0.003734 0.999988 -0.17486 REMARK 350 BIOMT1 18 -0.501865 0.309440 0.807699 106.54212 REMARK 350 BIOMT2 18 0.309440 -0.807776 0.501741 273.62559 REMARK 350 BIOMT3 18 0.807699 0.501741 0.309641 -170.53772 REMARK 350 BIOMT1 19 0.309117 0.808651 0.500529 -168.64374 REMARK 350 BIOMT2 19 0.808651 -0.500490 0.309180 105.18215 REMARK 350 BIOMT3 19 0.500529 0.309180 -0.808627 271.15060 REMARK 350 BIOMT1 20 0.312202 0.807735 -0.500095 103.49158 REMARK 350 BIOMT2 20 0.807735 -0.502794 -0.307836 274.23811 REMARK 350 BIOMT3 20 -0.500095 -0.307836 -0.809409 714.49186 REMARK 350 BIOMT1 21 -0.499997 -0.308424 -0.809245 715.97762 REMARK 350 BIOMT2 21 0.312626 0.807145 -0.500781 103.67027 REMARK 350 BIOMT3 21 0.807631 -0.503380 -0.307148 272.89724 REMARK 350 BIOMT1 22 -0.810983 -0.497038 0.308643 548.14475 REMARK 350 BIOMT2 22 -0.497038 0.307006 -0.811604 547.18879 REMARK 350 BIOMT3 22 0.308643 -0.811604 -0.496023 545.50039 REMARK 350 BIOMT1 23 -0.002558 0.003410 0.999991 1.16539 REMARK 350 BIOMT2 23 -0.999996 -0.000854 -0.002555 548.78644 REMARK 350 BIOMT3 23 0.000845 -0.999994 0.003412 545.29787 REMARK 350 BIOMT1 24 0.808063 0.501317 0.309380 -169.05359 REMARK 350 BIOMT2 24 -0.501178 0.309017 0.808288 106.25533 REMARK 350 BIOMT3 24 0.309605 -0.808202 0.500954 272.56955 REMARK 350 BIOMT1 25 0.500629 0.308593 -0.808790 272.72466 REMARK 350 BIOMT2 25 0.310068 0.808388 0.500367 -168.84160 REMARK 350 BIOMT3 25 0.808226 -0.501278 0.309017 104.21670 REMARK 350 BIOMT1 26 -0.310556 0.810228 0.497077 1.62834 REMARK 350 BIOMT2 26 -0.808755 -0.499997 0.309707 548.00105 REMARK 350 BIOMT3 26 0.499470 -0.305832 0.810553 -1.42931 REMARK 350 BIOMT1 27 -0.000526 1.000000 -0.000850 0.42972 REMARK 350 BIOMT2 27 0.000324 0.000850 1.000000 1.02063 REMARK 350 BIOMT3 27 1.000000 0.000525 -0.000325 -1.45146 REMARK 350 BIOMT1 28 -0.307371 0.809382 -0.500424 272.86569 REMARK 350 BIOMT2 28 0.810293 0.498353 0.308333 -168.62137 REMARK 350 BIOMT3 28 0.498947 -0.310718 -0.809016 441.48110 REMARK 350 BIOMT1 29 -0.807042 0.501802 -0.311251 442.43900 REMARK 350 BIOMT2 29 0.501802 0.304979 -0.809433 273.51453 REMARK 350 BIOMT3 29 -0.311251 -0.809433 -0.497937 715.25064 REMARK 350 BIOMT1 30 -0.809011 0.502326 0.305238 274.80510 REMARK 350 BIOMT2 30 -0.498824 -0.312035 -0.808584 716.41155 REMARK 350 BIOMT3 30 -0.310927 -0.806414 0.503012 441.51695 REMARK 350 BIOMT1 31 0.000522 -0.999996 0.002885 546.92648 REMARK 350 BIOMT2 31 -0.003407 0.002883 0.999990 1.48870 REMARK 350 BIOMT3 31 -0.999994 -0.000532 -0.003406 547.58740 REMARK 350 BIOMT1 32 0.309017 -0.808365 0.501053 274.14417 REMARK 350 BIOMT2 32 0.807799 0.501155 0.310330 -169.24979 REMARK 350 BIOMT3 32 -0.501965 0.308853 0.807862 105.28976 REMARK 350 BIOMT1 33 0.808063 -0.501178 0.309605 105.46993 REMARK 350 BIOMT2 33 0.501317 0.309017 -0.808202 272.20587 REMARK 350 BIOMT3 33 0.309380 0.808288 0.500954 -170.12798 REMARK 350 BIOMT1 34 0.807995 -0.502956 -0.306885 274.00583 REMARK 350 BIOMT2 34 -0.499306 -0.308002 -0.809832 715.77896 REMARK 350 BIOMT3 34 0.312789 0.807570 -0.499993 101.95214 REMARK 350 BIOMT1 35 0.308908 -0.811243 -0.496448 546.84098 REMARK 350 BIOMT2 35 -0.811243 -0.497203 0.307692 548.46655 REMARK 350 BIOMT3 35 -0.496448 0.307692 -0.811705 545.52464 REMARK 350 BIOMT1 36 0.810030 0.498191 0.309284 -168.71034 REMARK 350 BIOMT2 36 0.499536 -0.310031 -0.808916 442.44665 REMARK 350 BIOMT3 36 -0.307107 0.809744 -0.499999 271.18222 REMARK 350 BIOMT1 37 0.502491 0.305403 -0.808846 273.10345 REMARK 350 BIOMT2 37 -0.311086 -0.809011 -0.498726 716.64705 REMARK 350 BIOMT3 37 -0.806677 0.502225 -0.311514 440.89886 REMARK 350 BIOMT1 38 -0.498135 -0.311614 -0.809172 716.32109 REMARK 350 BIOMT2 38 -0.311614 -0.806516 0.502423 443.23574 REMARK 350 BIOMT3 38 -0.809172 0.502423 0.304650 273.58656 REMARK 350 BIOMT1 39 -0.809016 -0.500163 0.308756 548.43086 REMARK 350 BIOMT2 39 0.498681 -0.305994 0.810977 0.05785 REMARK 350 BIOMT3 39 -0.311143 0.810065 0.496976 0.46523 REMARK 350 BIOMT1 40 -0.000526 0.000324 1.000000 1.45136 REMARK 350 BIOMT2 40 1.000000 0.000850 0.000525 -0.42983 REMARK 350 BIOMT3 40 -0.000850 1.000000 -0.000325 -1.02073 REMARK 350 BIOMT1 41 -0.499997 0.312626 0.807631 105.17601 REMARK 350 BIOMT2 41 -0.308424 0.807145 -0.503380 274.51886 REMARK 350 BIOMT3 41 -0.809245 -0.500781 -0.307148 715.13760 REMARK 350 BIOMT1 42 0.309019 0.810616 0.497402 -168.30270 REMARK 350 BIOMT2 42 -0.809279 0.498847 -0.310193 443.51899 REMARK 350 BIOMT3 42 -0.499575 -0.306681 0.810168 272.60243 REMARK 350 BIOMT1 43 0.309017 0.807799 -0.501965 104.85628 REMARK 350 BIOMT2 43 -0.808365 0.501155 0.308853 273.90976 REMARK 350 BIOMT3 43 0.501053 0.310330 0.807862 -169.89718 REMARK 350 BIOMT1 44 -0.500000 0.308069 -0.809379 547.15652 REMARK 350 BIOMT2 44 -0.306945 0.810879 0.498257 0.08536 REMARK 350 BIOMT3 44 0.809805 0.497564 -0.310879 -0.84182 REMARK 350 BIOMT1 45 -0.999998 0.002035 -0.000004 547.35412 REMARK 350 BIOMT2 45 0.002035 0.999991 -0.003731 0.46180 REMARK 350 BIOMT3 45 -0.000004 -0.003731 -0.999993 546.13976 REMARK 350 BIOMT1 46 0.000522 -0.003407 -0.999994 547.30346 REMARK 350 BIOMT2 46 -0.999996 0.002883 -0.000532 547.21133 REMARK 350 BIOMT3 46 0.002885 0.999990 -0.003406 -1.20166 REMARK 350 BIOMT1 47 -0.809082 -0.500684 -0.307736 716.62256 REMARK 350 BIOMT2 47 -0.500684 0.313050 0.807041 105.35527 REMARK 350 BIOMT3 47 -0.307736 0.807041 -0.503967 273.17635 REMARK 350 BIOMT1 48 -0.500000 -0.306945 0.809805 274.28603 REMARK 350 BIOMT2 48 0.308069 0.810879 0.497564 -168.21207 REMARK 350 BIOMT3 48 -0.809379 0.498257 -0.310879 442.55264 REMARK 350 BIOMT1 49 0.500629 0.310068 0.808226 -168.41208 REMARK 350 BIOMT2 49 0.308593 0.808388 -0.501278 104.57007 REMARK 350 BIOMT3 49 -0.808790 0.500367 0.309017 272.85494 REMARK 350 BIOMT1 50 0.809968 0.497665 -0.310292 0.32197 REMARK 350 BIOMT2 50 -0.499835 0.309019 -0.809118 546.72605 REMARK 350 BIOMT3 50 -0.306783 0.810455 0.499046 -1.40030 REMARK 350 BIOMT1 51 0.810030 0.499536 -0.307107 -1.07549 REMARK 350 BIOMT2 51 0.498191 -0.310031 0.809744 1.63398 REMARK 350 BIOMT3 51 0.309284 -0.808916 -0.499999 545.67223 REMARK 350 BIOMT1 52 0.002561 -0.000326 -0.999997 545.90189 REMARK 350 BIOMT2 52 0.999993 -0.002880 0.002562 0.03873 REMARK 350 BIOMT3 52 -0.002880 -0.999996 0.000319 547.16208 REMARK 350 BIOMT1 53 -0.809011 -0.498824 -0.310927 716.96347 REMARK 350 BIOMT2 53 0.502326 -0.312035 -0.806414 441.54943 REMARK 350 BIOMT3 53 0.305238 -0.808584 0.503012 273.30944 REMARK 350 BIOMT1 54 -0.503120 -0.307051 0.807830 275.70795 REMARK 350 BIOMT2 54 -0.307051 -0.810256 -0.499205 716.01329 REMARK 350 BIOMT3 54 0.807831 -0.499205 0.313376 102.56935 REMARK 350 BIOMT1 55 0.497502 0.309970 0.810191 -168.06453 REMARK 350 BIOMT2 55 -0.309606 -0.809017 0.499636 444.13060 REMARK 350 BIOMT3 55 0.810331 -0.499410 -0.306519 270.89881 REMARK 350 BIOMT1 56 -0.310556 -0.808755 0.499470 444.41812 REMARK 350 BIOMT2 56 0.810228 -0.499997 -0.305832 272.24250 REMARK 350 BIOMT3 56 0.497077 0.309707 0.810553 -169.37061 REMARK 350 BIOMT1 57 0.497502 -0.309606 0.810331 1.60034 REMARK 350 BIOMT2 57 0.309970 -0.809017 -0.499410 546.69367 REMARK 350 BIOMT3 57 0.810191 0.499636 -0.306519 -2.70330 REMARK 350 BIOMT1 58 0.999993 -0.002029 0.003087 -0.28368 REMARK 350 BIOMT2 58 -0.002029 -0.999998 -0.000003 548.35955 REMARK 350 BIOMT3 58 0.003087 -0.000003 -0.999995 544.27266 REMARK 350 BIOMT1 59 0.502491 -0.311086 -0.806677 441.36970 REMARK 350 BIOMT2 59 0.305403 -0.809011 0.502225 274.93795 REMARK 350 BIOMT3 59 -0.808846 -0.498726 -0.311514 715.65508 REMARK 350 BIOMT1 60 -0.307473 -0.809669 -0.499896 716.21053 REMARK 350 BIOMT2 60 0.807406 -0.499993 0.313213 104.28823 REMARK 350 BIOMT3 60 -0.503544 -0.307314 0.807466 274.59928 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 254 15.34 59.14 REMARK 500 ASN A 288 56.05 -91.95 REMARK 500 LYS A 312 -50.26 -120.15 REMARK 500 SER A 426 58.43 -95.98 REMARK 500 ALA A 458 39.20 -96.40 REMARK 500 PRO A 522 32.17 -97.89 REMARK 500 HIS A 632 75.55 49.71 REMARK 500 THR A 731 -31.64 -130.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-20502 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-20615 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-20626 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-20710 RELATED DB: EMDB REMARK 900 AAV8 BACULOVIRUS-SF9 PRODUCED, EMPTY CAPSID DBREF 6UBM A 220 738 UNP Q8JQF8 Q8JQF8_9VIRU 220 738 SEQRES 1 A 519 ASP GLY VAL GLY SER SER SER GLY ASN TRP HIS CYS ASP SEQRES 2 A 519 SER THR TRP LEU GLY ASP ARG VAL ILE THR THR SER THR SEQRES 3 A 519 ARG THR TRP ALA LEU PRO THR TYR ASN ASN HIS LEU TYR SEQRES 4 A 519 LYS GLN ILE SER ASN GLY THR SER GLY GLY ALA THR ASN SEQRES 5 A 519 ASP ASN THR TYR PHE GLY TYR SER THR PRO TRP GLY TYR SEQRES 6 A 519 PHE ASP PHE ASN ARG PHE HIS CYS HIS PHE SER PRO ARG SEQRES 7 A 519 ASP TRP GLN ARG LEU ILE ASN ASN ASN TRP GLY PHE ARG SEQRES 8 A 519 PRO LYS ARG LEU SER PHE LYS LEU PHE ASN ILE GLN VAL SEQRES 9 A 519 LYS GLU VAL THR GLN ASN GLU GLY THR LYS THR ILE ALA SEQRES 10 A 519 ASN ASN LEU THR SER THR ILE GLN VAL PHE THR ASP SER SEQRES 11 A 519 GLU TYR GLN LEU PRO TYR VAL LEU GLY SER ALA HIS GLN SEQRES 12 A 519 GLY CYS LEU PRO PRO PHE PRO ALA ASP VAL PHE MET ILE SEQRES 13 A 519 PRO GLN TYR GLY TYR LEU THR LEU ASN ASN GLY SER GLN SEQRES 14 A 519 ALA VAL GLY ARG SER SER PHE TYR CYS LEU GLU TYR PHE SEQRES 15 A 519 PRO SER GLN MET LEU ARG THR GLY ASN ASN PHE GLN PHE SEQRES 16 A 519 THR TYR THR PHE GLU ASP VAL PRO PHE HIS SER SER TYR SEQRES 17 A 519 ALA HIS SER GLN SER LEU ASP ARG LEU MET ASN PRO LEU SEQRES 18 A 519 ILE ASP GLN TYR LEU TYR TYR LEU SER ARG THR GLN THR SEQRES 19 A 519 THR GLY GLY THR ALA ASN THR GLN THR LEU GLY PHE SER SEQRES 20 A 519 GLN GLY GLY PRO ASN THR MET ALA ASN GLN ALA LYS ASN SEQRES 21 A 519 TRP LEU PRO GLY PRO CYS TYR ARG GLN GLN ARG VAL SER SEQRES 22 A 519 THR THR THR GLY GLN ASN ASN ASN SER ASN PHE ALA TRP SEQRES 23 A 519 THR ALA GLY THR LYS TYR HIS LEU ASN GLY ARG ASN SER SEQRES 24 A 519 LEU ALA ASN PRO GLY ILE ALA MET ALA THR HIS LYS ASP SEQRES 25 A 519 ASP GLU GLU ARG PHE PHE PRO SER ASN GLY ILE LEU ILE SEQRES 26 A 519 PHE GLY LYS GLN ASN ALA ALA ARG ASP ASN ALA ASP TYR SEQRES 27 A 519 SER ASP VAL MET LEU THR SER GLU GLU GLU ILE LYS THR SEQRES 28 A 519 THR ASN PRO VAL ALA THR GLU GLU TYR GLY ILE VAL ALA SEQRES 29 A 519 ASP ASN LEU GLN GLN GLN ASN THR ALA PRO GLN ILE GLY SEQRES 30 A 519 THR VAL ASN SER GLN GLY ALA LEU PRO GLY MET VAL TRP SEQRES 31 A 519 GLN ASN ARG ASP VAL TYR LEU GLN GLY PRO ILE TRP ALA SEQRES 32 A 519 LYS ILE PRO HIS THR ASP GLY ASN PHE HIS PRO SER PRO SEQRES 33 A 519 LEU MET GLY GLY PHE GLY LEU LYS HIS PRO PRO PRO GLN SEQRES 34 A 519 ILE LEU ILE LYS ASN THR PRO VAL PRO ALA ASP PRO PRO SEQRES 35 A 519 THR THR PHE ASN GLN SER LYS LEU ASN SER PHE ILE THR SEQRES 36 A 519 GLN TYR SER THR GLY GLN VAL SER VAL GLU ILE GLU TRP SEQRES 37 A 519 GLU LEU GLN LYS GLU ASN SER LYS ARG TRP ASN PRO GLU SEQRES 38 A 519 ILE GLN TYR THR SER ASN TYR TYR LYS SER THR SER VAL SEQRES 39 A 519 ASP PHE ALA VAL ASN THR GLU GLY VAL TYR SER GLU PRO SEQRES 40 A 519 ARG PRO ILE GLY THR ARG TYR LEU THR ARG ASN LEU HELIX 1 AA1 THR A 270 THR A 274 5 5 HELIX 2 AA2 ARG A 289 HIS A 293 5 5 HELIX 3 AA3 SER A 295 ASN A 305 1 11 HELIX 4 AA4 CYS A 397 PHE A 401 5 5 HELIX 5 AA5 SER A 432 LEU A 436 5 5 HELIX 6 AA6 THR A 494 ASN A 498 5 5 HELIX 7 AA7 ASP A 556 SER A 558 5 3 HELIX 8 AA8 GLU A 565 THR A 571 5 7 SHEET 1 AA1 5 SER A 233 TRP A 235 0 SHEET 2 AA1 5 ARG A 239 LEU A 250 -1 O ILE A 241 N THR A 234 SHEET 3 AA1 5 GLN A 675 LYS A 691 -1 O TRP A 687 N VAL A 240 SHEET 4 AA1 5 ASN A 306 ASN A 329 -1 N ARG A 310 O GLU A 688 SHEET 5 AA1 5 VAL A 372 MET A 374 0 SHEET 1 AA2 5 THR A 332 ASN A 338 0 SHEET 2 AA2 5 ASN A 306 ASN A 329 -1 N GLU A 325 O ALA A 336 SHEET 3 AA2 5 GLN A 675 LYS A 691 -1 O GLU A 688 N ARG A 310 SHEET 4 AA2 5 ARG A 239 LEU A 250 -1 N VAL A 240 O TRP A 687 SHEET 5 AA2 5 PHE A 412 THR A 417 0 SHEET 1 AA3 3 LYS A 259 ASN A 263 0 SHEET 2 AA3 3 TYR A 275 SER A 279 -1 O GLY A 277 N ILE A 261 SHEET 3 AA3 3 GLY A 379 LEU A 381 -1 O TYR A 380 N TYR A 278 SHEET 1 AA4 4 GLY A 283 TYR A 284 0 SHEET 2 AA4 4 ILE A 649 ASN A 653 -1 O ILE A 651 N GLY A 283 SHEET 3 AA4 4 ILE A 343 THR A 347 -1 N GLN A 344 O LYS A 652 SHEET 4 AA4 4 GLN A 404 LEU A 406 -1 O LEU A 406 N ILE A 343 SHEET 1 AA5 2 ALA A 428 HIS A 429 0 SHEET 2 AA5 2 THR A 735 ARG A 736 1 O ARG A 736 N ALA A 428 SHEET 1 AA6 2 TYR A 446 GLN A 452 0 SHEET 2 AA6 2 GLN A 461 GLN A 467 -1 O THR A 462 N THR A 451 SHEET 1 AA7 2 CYS A 485 TYR A 486 0 SHEET 2 AA7 2 SER A 600 GLN A 601 -1 O GLN A 601 N CYS A 485 SHEET 1 AA8 2 ARG A 490 SER A 492 0 SHEET 2 AA8 2 PHE A 536 PRO A 538 -1 O PHE A 537 N VAL A 491 SHEET 1 AA9 2 LYS A 510 HIS A 512 0 SHEET 2 AA9 2 ASN A 517 LEU A 519 -1 O SER A 518 N TYR A 511 SHEET 1 AB1 2 ILE A 544 GLY A 546 0 SHEET 2 AB1 2 VAL A 560 LEU A 562 -1 O MET A 561 N PHE A 545 SHEET 1 AB2 2 GLY A 580 ALA A 583 0 SHEET 2 AB2 2 ILE A 595 VAL A 598 -1 O GLY A 596 N VAL A 582 SHEET 1 AB3 2 TRP A 621 LYS A 623 0 SHEET 2 AB3 2 PHE A 640 LEU A 642 1 O LEU A 642 N ALA A 622 CISPEP 1 ASN A 521 PRO A 522 0 -4.25 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000