HEADER TRANSCRIPTION 17-SEP-19 6UCS TITLE DISCOVERY AND STRUCTURE-BASED OPTIMIZATION OF POTENT AND SELECTIVE TITLE 2 WDR5 INHIBITORS CONTAINING A DIHYDROISOQUINOLINONE BICYCLIC CORE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WDR5, BIG3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS WDR5, STRUCTURE-BASED DESIGN, MIXED-LINEAGE LEUKEMIA, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO REVDAT 5 15-MAY-24 6UCS 1 COMPND HETNAM FORMUL REVDAT 4 11-OCT-23 6UCS 1 REMARK REVDAT 3 05-FEB-20 6UCS 1 JRNL REVDAT 2 15-JAN-20 6UCS 1 JRNL REVDAT 1 01-JAN-20 6UCS 0 JRNL AUTH J.TIAN,K.B.TEUSCHER,E.R.AHO,J.R.ALVARADO,J.J.MILLS, JRNL AUTH 2 K.M.MEYERS,R.D.GOGLIOTTI,C.HAN,J.D.MACDONALD,J.SAI,J.G.SHAW, JRNL AUTH 3 J.L.SENSINTAFFAR,B.ZHAO,T.A.RIETZ,L.R.THOMAS,W.G.PAYNE, JRNL AUTH 4 W.J.MOORE,G.M.STOTT,J.KONDO,M.INOUE,R.J.COFFEY,W.P.TANSEY, JRNL AUTH 5 S.R.STAUFFER,T.LEE,S.W.FESIK JRNL TITL DISCOVERY AND STRUCTURE-BASED OPTIMIZATION OF POTENT AND JRNL TITL 2 SELECTIVE WD REPEAT DOMAIN 5 (WDR5) INHIBITORS CONTAINING A JRNL TITL 3 DIHYDROISOQUINOLINONE BICYCLIC CORE. JRNL REF J.MED.CHEM. V. 63 656 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 31858797 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01608 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 44070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.570 REMARK 3 FREE R VALUE TEST SET COUNT : 2013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2400 - 4.4540 0.98 3220 146 0.1651 0.1679 REMARK 3 2 4.4540 - 3.5374 0.97 3176 158 0.1409 0.1632 REMARK 3 3 3.5374 - 3.0909 0.96 3114 154 0.1492 0.1704 REMARK 3 4 3.0909 - 2.8086 0.94 3104 158 0.1698 0.2028 REMARK 3 5 2.8086 - 2.6074 0.94 3064 151 0.1696 0.2251 REMARK 3 6 2.6074 - 2.4538 0.94 3068 142 0.1752 0.1978 REMARK 3 7 2.4538 - 2.3310 0.93 3066 136 0.1747 0.1864 REMARK 3 8 2.3310 - 2.2295 0.91 2974 144 0.1760 0.2204 REMARK 3 9 2.2295 - 2.1437 0.91 2993 139 0.1703 0.2051 REMARK 3 10 2.1437 - 2.0698 0.90 2973 142 0.1698 0.1963 REMARK 3 11 2.0698 - 2.0051 0.89 2939 140 0.1796 0.2615 REMARK 3 12 2.0051 - 1.9478 0.88 2823 139 0.1940 0.2482 REMARK 3 13 1.9478 - 1.8965 0.88 2897 144 0.2010 0.2337 REMARK 3 14 1.8965 - 1.8503 0.81 2646 120 0.2181 0.2319 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4942 REMARK 3 ANGLE : 1.001 6735 REMARK 3 CHIRALITY : 0.112 756 REMARK 3 PLANARITY : 0.006 837 REMARK 3 DIHEDRAL : 7.565 3896 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2010 24.0020 -1.4552 REMARK 3 T TENSOR REMARK 3 T11: 0.1114 T22: 0.1165 REMARK 3 T33: 0.1229 T12: -0.0441 REMARK 3 T13: -0.0023 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.0166 L22: 0.6195 REMARK 3 L33: 0.9166 L12: -0.1657 REMARK 3 L13: -0.1619 L23: 0.0392 REMARK 3 S TENSOR REMARK 3 S11: 0.0110 S12: 0.0731 S13: -0.1092 REMARK 3 S21: -0.0751 S22: 0.0011 S23: 0.0226 REMARK 3 S31: 0.0364 S32: -0.0301 S33: -0.0164 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3030 35.0453 0.3408 REMARK 3 T TENSOR REMARK 3 T11: 0.1284 T22: 0.1841 REMARK 3 T33: 0.1729 T12: -0.0468 REMARK 3 T13: 0.0020 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.3620 L22: 1.4623 REMARK 3 L33: 1.9315 L12: -0.9807 REMARK 3 L13: -0.8084 L23: -0.1735 REMARK 3 S TENSOR REMARK 3 S11: 0.0983 S12: 0.0434 S13: 0.1887 REMARK 3 S21: -0.0733 S22: -0.0625 S23: -0.2830 REMARK 3 S31: -0.2100 S32: 0.1644 S33: -0.0481 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3090 41.9839 -6.2532 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.1226 REMARK 3 T33: 0.1570 T12: 0.0155 REMARK 3 T13: 0.0004 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 1.8076 L22: 1.8783 REMARK 3 L33: 1.9413 L12: 0.2613 REMARK 3 L13: -0.3366 L23: -0.0913 REMARK 3 S TENSOR REMARK 3 S11: 0.0643 S12: 0.0892 S13: 0.2117 REMARK 3 S21: -0.0460 S22: -0.0566 S23: -0.1130 REMARK 3 S31: -0.1412 S32: 0.0009 S33: -0.0189 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8291 38.1142 -37.4965 REMARK 3 T TENSOR REMARK 3 T11: 0.1683 T22: 0.1602 REMARK 3 T33: 0.1366 T12: 0.0281 REMARK 3 T13: -0.0236 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.3055 L22: 0.6169 REMARK 3 L33: 1.2414 L12: 0.2036 REMARK 3 L13: -0.3578 L23: -0.1770 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: -0.0880 S13: 0.1578 REMARK 3 S21: 0.0833 S22: 0.0638 S23: -0.0040 REMARK 3 S31: -0.1298 S32: -0.0804 S33: -0.0400 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1181 26.1295 -36.3495 REMARK 3 T TENSOR REMARK 3 T11: 0.1521 T22: 0.2355 REMARK 3 T33: 0.1619 T12: 0.0569 REMARK 3 T13: -0.0132 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 2.8653 L22: 1.9459 REMARK 3 L33: 1.6190 L12: 1.3243 REMARK 3 L13: -0.2178 L23: -0.4577 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: -0.4141 S13: -0.2352 REMARK 3 S21: 0.1297 S22: -0.0846 S23: -0.2700 REMARK 3 S31: 0.1544 S32: 0.1976 S33: 0.0961 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 234 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5350 19.8591 -31.2473 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1419 REMARK 3 T33: 0.1322 T12: -0.0151 REMARK 3 T13: 0.0032 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.5905 L22: 1.9986 REMARK 3 L33: 2.2819 L12: -0.1934 REMARK 3 L13: -0.5286 L23: -0.3249 REMARK 3 S TENSOR REMARK 3 S11: -0.0748 S12: -0.0210 S13: -0.1335 REMARK 3 S21: -0.0066 S22: 0.0329 S23: -0.0669 REMARK 3 S31: 0.1700 S32: -0.0141 S33: 0.0496 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND ((RESID 31 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 32 THROUGH 90 OR RESID 92 REMARK 3 THROUGH 96 OR RESID 98 THROUGH 109 OR REMARK 3 RESID 111 THROUGH 119 OR (RESID 120 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 121 THROUGH 153 OR REMARK 3 RESID 155 THROUGH 210 OR RESID 214 REMARK 3 THROUGH 334)) REMARK 3 SELECTION : (CHAIN B AND ((RESID 31 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 32 THROUGH 90 OR RESID 92 REMARK 3 THROUGH 96 OR RESID 98 THROUGH 108 OR REMARK 3 (RESID 109 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD OR NAME CE )) OR RESID 111 THROUGH 153 REMARK 3 OR RESID 155 THROUGH 158 OR (RESID 159 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 160 THROUGH 161 REMARK 3 OR (RESID 162 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 163 THROUGH 334)) REMARK 3 ATOM PAIRS NUMBER : 2644 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UCS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44095 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.35200 REMARK 200 R SYM FOR SHELL (I) : 0.25300 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6DY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS, AMMONIUM ACETATE, PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASP A 211 REMARK 465 ASP A 212 REMARK 465 ASP A 213 REMARK 465 SER B 22 REMARK 465 ALA B 23 REMARK 465 PRO B 28 REMARK 465 THR B 29 REMARK 465 PRO B 30 REMARK 465 ASP B 211 REMARK 465 ASP B 212 REMARK 465 ASP B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 26 CB OG REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 PRO A 28 CB CG CD REMARK 470 THR A 29 OG1 CG2 REMARK 470 LYS A 32 NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 87 CE NZ REMARK 470 LYS A 109 NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 LYS A 207 CE NZ REMARK 470 ILE A 210 CG1 CG2 CD1 REMARK 470 ASN A 214 CG OD1 ND2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 LYS A 245 CD CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 256 CD CE NZ REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 LYS A 296 NZ REMARK 470 VAL B 31 CB CG1 CG2 REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 LYS B 87 CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 GLN B 140 OE1 REMARK 470 ARG B 181 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 210 CG1 CG2 CD1 REMARK 470 ASN B 214 CG OD1 ND2 REMARK 470 LYS B 227 CG CD CE NZ REMARK 470 LYS B 245 CD CE NZ REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 LYS B 256 NZ REMARK 470 LYS B 259 CG CD CE NZ REMARK 470 GLU B 292 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 234 35.39 -78.48 REMARK 500 LYS A 259 -39.57 -131.97 REMARK 500 ASP A 324 -61.44 -120.44 REMARK 500 ASN B 180 -167.57 -78.08 REMARK 500 LEU B 234 35.58 -78.02 REMARK 500 LYS B 259 -39.88 -133.44 REMARK 500 ASP B 324 -61.32 -120.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 721 DISTANCE = 6.24 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q41 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q41 B 401 DBREF 6UCS A 22 334 UNP P61964 WDR5_HUMAN 22 334 DBREF 6UCS B 22 334 UNP P61964 WDR5_HUMAN 22 334 SEQRES 1 A 313 SER ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN SEQRES 2 A 313 TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA SEQRES 3 A 313 VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU SEQRES 4 A 313 ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY SEQRES 5 A 313 ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS SEQRES 6 A 313 LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER SEQRES 7 A 313 ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS SEQRES 8 A 313 ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU SEQRES 9 A 313 LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN SEQRES 10 A 313 PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SEQRES 11 A 313 SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU SEQRES 12 A 313 LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL SEQRES 13 A 313 HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER SEQRES 14 A 313 TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY SEQRES 15 A 313 GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO SEQRES 16 A 313 VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE SEQRES 17 A 313 LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP SEQRES 18 A 313 TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS SEQRES 19 A 313 LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL SEQRES 20 A 313 THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN SEQRES 21 A 313 LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL SEQRES 22 A 313 GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR SEQRES 23 A 313 ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA SEQRES 24 A 313 LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP SEQRES 25 A 313 CYS SEQRES 1 B 313 SER ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN SEQRES 2 B 313 TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA SEQRES 3 B 313 VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU SEQRES 4 B 313 ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY SEQRES 5 B 313 ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS SEQRES 6 B 313 LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER SEQRES 7 B 313 ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS SEQRES 8 B 313 ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU SEQRES 9 B 313 LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN SEQRES 10 B 313 PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SEQRES 11 B 313 SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU SEQRES 12 B 313 LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL SEQRES 13 B 313 HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER SEQRES 14 B 313 TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY SEQRES 15 B 313 GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO SEQRES 16 B 313 VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE SEQRES 17 B 313 LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP SEQRES 18 B 313 TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS SEQRES 19 B 313 LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL SEQRES 20 B 313 THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN SEQRES 21 B 313 LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL SEQRES 22 B 313 GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR SEQRES 23 B 313 ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA SEQRES 24 B 313 LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP SEQRES 25 B 313 CYS HET Q41 A 401 38 HET Q41 B 401 38 HETNAM Q41 2-AMINO-3-{[(5P)-2-[(3,5-DIMETHOXYPHENYL)METHYL]-5-(4- HETNAM 2 Q41 FLUORO-2-METHYLPHENYL)-1-OXO-1,2,3,4- HETNAM 3 Q41 TETRAHYDROISOQUINOLIN-7-YL]METHYL}-1-METHYL-1H- HETNAM 4 Q41 IMIDAZOL-3-IUM FORMUL 3 Q41 2(C30 H32 F N4 O3 1+) FORMUL 5 HOH *469(H2 O) SHEET 1 AA1 4 ALA A 36 LEU A 41 0 SHEET 2 AA1 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA1 4 ILE A 315 ALA A 320 -1 N ILE A 316 O TRP A 330 SHEET 4 AA1 4 VAL A 304 CYS A 309 -1 N ALA A 308 O ALA A 317 SHEET 1 AA2 4 VAL A 48 PHE A 53 0 SHEET 2 AA2 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 AA2 4 ILE A 69 GLY A 73 -1 O TRP A 72 N LEU A 60 SHEET 4 AA2 4 PHE A 79 ILE A 83 -1 O GLU A 80 N ILE A 71 SHEET 1 AA3 4 ILE A 90 TRP A 95 0 SHEET 2 AA3 4 LEU A 101 SER A 106 -1 O VAL A 103 N ALA A 94 SHEET 3 AA3 4 LEU A 111 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 AA3 4 LYS A 120 LEU A 125 -1 O LEU A 122 N ILE A 113 SHEET 1 AA4 4 VAL A 132 PHE A 137 0 SHEET 2 AA4 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AA4 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 AA4 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 AA5 4 VAL A 174 PHE A 179 0 SHEET 2 AA5 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AA5 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 AA5 4 CYS A 205 LEU A 209 -1 O LEU A 206 N ILE A 197 SHEET 1 AA6 4 VAL A 217 PHE A 222 0 SHEET 2 AA6 4 TYR A 228 THR A 233 -1 O ALA A 232 N PHE A 219 SHEET 3 AA6 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 AA6 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AA7 4 ALA A 264 SER A 267 0 SHEET 2 AA7 4 TRP A 273 SER A 276 -1 O TRP A 273 N SER A 267 SHEET 3 AA7 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 AA7 4 ILE A 293 LEU A 297 -1 O VAL A 294 N ILE A 285 SHEET 1 AA8 4 ALA B 36 LEU B 41 0 SHEET 2 AA8 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 AA8 4 ILE B 315 ALA B 320 -1 N ILE B 316 O TRP B 330 SHEET 4 AA8 4 VAL B 304 CYS B 309 -1 N ALA B 308 O ALA B 317 SHEET 1 AA9 4 VAL B 48 PHE B 53 0 SHEET 2 AA9 4 TRP B 59 SER B 64 -1 O SER B 63 N SER B 49 SHEET 3 AA9 4 ILE B 69 GLY B 73 -1 O TRP B 72 N LEU B 60 SHEET 4 AA9 4 PHE B 79 ILE B 83 -1 O ILE B 83 N ILE B 69 SHEET 1 AB1 4 ILE B 90 TRP B 95 0 SHEET 2 AB1 4 LEU B 101 SER B 106 -1 O VAL B 103 N ALA B 94 SHEET 3 AB1 4 LEU B 111 ASP B 115 -1 O TRP B 114 N LEU B 102 SHEET 4 AB1 4 CYS B 121 LEU B 125 -1 O LEU B 122 N ILE B 113 SHEET 1 AB2 4 VAL B 132 PHE B 137 0 SHEET 2 AB2 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 AB2 4 VAL B 153 ASP B 157 -1 O TRP B 156 N ILE B 144 SHEET 4 AB2 4 CYS B 163 LEU B 167 -1 O LEU B 167 N VAL B 153 SHEET 1 AB3 4 VAL B 174 PHE B 179 0 SHEET 2 AB3 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 AB3 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 AB3 4 CYS B 205 LEU B 209 -1 O LEU B 209 N CYS B 195 SHEET 1 AB4 4 VAL B 217 PHE B 222 0 SHEET 2 AB4 4 TYR B 228 THR B 233 -1 O ALA B 232 N PHE B 219 SHEET 3 AB4 4 THR B 237 ASP B 242 -1 O TRP B 241 N ILE B 229 SHEET 4 AB4 4 LYS B 247 TYR B 252 -1 O LEU B 249 N LEU B 240 SHEET 1 AB5 4 ALA B 264 SER B 267 0 SHEET 2 AB5 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 AB5 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 AB5 4 ILE B 293 LEU B 297 -1 O LEU B 297 N VAL B 283 SITE 1 AC1 17 SER A 49 ALA A 65 GLY A 89 ILE A 90 SITE 2 AC1 17 SER A 91 ASP A 92 PHE A 133 PHE A 149 SITE 3 AC1 17 PRO A 173 SER A 175 TYR A 191 TYR A 260 SITE 4 AC1 17 CYS A 261 PHE A 263 ILE A 305 LEU A 321 SITE 5 AC1 17 HOH A 570 SITE 1 AC2 15 SER B 49 ALA B 65 GLY B 89 ILE B 90 SITE 2 AC2 15 SER B 91 PHE B 133 PHE B 149 PRO B 173 SITE 3 AC2 15 SER B 175 TYR B 191 TYR B 260 CYS B 261 SITE 4 AC2 15 PHE B 263 ILE B 305 HOH B 513 CRYST1 46.566 47.099 68.984 89.06 89.82 74.18 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021475 -0.006085 0.000032 0.00000 SCALE2 0.000000 0.022068 -0.000356 0.00000 SCALE3 0.000000 0.000000 0.014498 0.00000