HEADER TRANSCRIPTION 02-OCT-19 6UJ4 TITLE DISCOVERY OF FRAGMENT-INSPIRED HETEROCYCLIC BENZENESULFONMIDES AS TITLE 2 INHIBITORS OF THE WDR5-MYC INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT DOMAIN 5; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS WDR5, MYC, STRUCTURE-BASED DESIGN, FRAGMENT SCREENING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO REVDAT 3 11-OCT-23 6UJ4 1 REMARK REVDAT 2 06-MAY-20 6UJ4 1 JRNL REVDAT 1 15-APR-20 6UJ4 0 JRNL AUTH S.CHACON SIMON,F.WANG,L.R.THOMAS,J.PHAN,B.ZHAO, JRNL AUTH 2 E.T.OLEJNICZAK,J.D.MACDONALD,J.G.SHAW,C.SCHLUND,W.PAYNE, JRNL AUTH 3 J.CREIGHTON,S.R.STAUFFER,A.G.WATERSON,W.P.TANSEY,S.W.FESIK JRNL TITL DISCOVERY OF WD REPEAT-CONTAINING PROTEIN 5 (WDR5)-MYC JRNL TITL 2 INHIBITORS USING FRAGMENT-BASED METHODS AND STRUCTURE-BASED JRNL TITL 3 DESIGN. JRNL REF J.MED.CHEM. V. 63 4315 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32223236 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00224 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 84510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.360 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8000 - 3.6854 0.99 6092 141 0.1406 0.1505 REMARK 3 2 3.6854 - 2.9260 0.99 5988 151 0.1406 0.1422 REMARK 3 3 2.9260 - 2.5564 0.99 6032 146 0.1564 0.1735 REMARK 3 4 2.5564 - 2.3227 0.99 5975 148 0.1515 0.1601 REMARK 3 5 2.3227 - 2.1563 0.99 5975 144 0.1481 0.1781 REMARK 3 6 2.1563 - 2.0292 0.99 5948 148 0.1447 0.1800 REMARK 3 7 2.0292 - 1.9276 0.98 5949 143 0.1454 0.1681 REMARK 3 8 1.9276 - 1.8437 0.98 5899 144 0.1418 0.1522 REMARK 3 9 1.8437 - 1.7727 0.98 5882 141 0.1510 0.1985 REMARK 3 10 1.7727 - 1.7116 0.97 5834 141 0.1621 0.1939 REMARK 3 11 1.7116 - 1.6581 0.97 5801 136 0.1652 0.1999 REMARK 3 12 1.6581 - 1.6107 0.96 5803 140 0.1715 0.2032 REMARK 3 13 1.6107 - 1.5683 0.95 5717 139 0.1853 0.2258 REMARK 3 14 1.5683 - 1.5300 0.93 5617 136 0.2064 0.2705 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5389 21.4530 -8.5755 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0401 REMARK 3 T33: 0.0134 T12: -0.0090 REMARK 3 T13: 0.0165 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.0520 L22: 0.0691 REMARK 3 L33: 0.0854 L12: 0.0039 REMARK 3 L13: 0.0138 L23: -0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: 0.0328 S13: -0.0173 REMARK 3 S21: -0.0392 S22: 0.0072 S23: -0.0292 REMARK 3 S31: 0.0144 S32: 0.0395 S33: -0.0679 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5318 26.9872 -0.9019 REMARK 3 T TENSOR REMARK 3 T11: 0.0017 T22: 0.0214 REMARK 3 T33: 0.0040 T12: -0.0022 REMARK 3 T13: -0.0094 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.1678 L22: 0.1194 REMARK 3 L33: 0.2844 L12: 0.0436 REMARK 3 L13: 0.0490 L23: 0.0147 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: -0.0197 S13: 0.0241 REMARK 3 S21: -0.0104 S22: 0.0030 S23: 0.0225 REMARK 3 S31: -0.0292 S32: -0.0220 S33: -0.0008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8196 13.2073 -2.3435 REMARK 3 T TENSOR REMARK 3 T11: 0.0185 T22: 0.0378 REMARK 3 T33: 0.0618 T12: -0.0017 REMARK 3 T13: -0.0018 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.9326 L22: 0.4041 REMARK 3 L33: 0.1881 L12: -0.4816 REMARK 3 L13: 0.1473 L23: 0.0225 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: -0.0329 S13: -0.1439 REMARK 3 S21: 0.0170 S22: 0.0193 S23: 0.0787 REMARK 3 S31: 0.0498 S32: -0.0331 S33: 0.0023 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2324 7.2898 -5.1194 REMARK 3 T TENSOR REMARK 3 T11: 0.0502 T22: 0.0159 REMARK 3 T33: 0.0488 T12: 0.0008 REMARK 3 T13: 0.0095 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.4934 L22: 0.3746 REMARK 3 L33: 0.2384 L12: 0.0210 REMARK 3 L13: -0.1222 L23: -0.0542 REMARK 3 S TENSOR REMARK 3 S11: -0.0100 S12: -0.0439 S13: -0.1279 REMARK 3 S21: 0.0063 S22: 0.0016 S23: 0.0569 REMARK 3 S31: 0.0428 S32: 0.0127 S33: 0.0092 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4345 21.9847 -30.7544 REMARK 3 T TENSOR REMARK 3 T11: 0.0158 T22: 0.0349 REMARK 3 T33: 0.0055 T12: 0.0135 REMARK 3 T13: -0.0030 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 0.1000 L22: 0.1139 REMARK 3 L33: 0.2583 L12: -0.0264 REMARK 3 L13: -0.0495 L23: -0.0342 REMARK 3 S TENSOR REMARK 3 S11: -0.0350 S12: -0.0523 S13: 0.0216 REMARK 3 S21: 0.0470 S22: 0.0319 S23: -0.0258 REMARK 3 S31: -0.0092 S32: 0.0391 S33: -0.1825 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3895 10.2468 -35.7890 REMARK 3 T TENSOR REMARK 3 T11: 0.0188 T22: 0.0026 REMARK 3 T33: 0.0095 T12: -0.0049 REMARK 3 T13: 0.0047 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.2742 L22: 0.4427 REMARK 3 L33: 0.4472 L12: -0.0637 REMARK 3 L13: 0.0028 L23: -0.0930 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: -0.0162 S13: -0.0222 REMARK 3 S21: 0.0397 S22: 0.0144 S23: -0.0328 REMARK 3 S31: 0.0410 S32: -0.0017 S33: 0.0195 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2944 22.0744 -38.4081 REMARK 3 T TENSOR REMARK 3 T11: -0.0052 T22: 0.0105 REMARK 3 T33: 0.0116 T12: -0.0057 REMARK 3 T13: 0.0066 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.1586 L22: 0.1463 REMARK 3 L33: 0.3305 L12: 0.0284 REMARK 3 L13: -0.0971 L23: -0.0634 REMARK 3 S TENSOR REMARK 3 S11: -0.0093 S12: 0.0206 S13: -0.0059 REMARK 3 S21: 0.0085 S22: 0.0146 S23: 0.0544 REMARK 3 S31: 0.0159 S32: -0.0406 S33: 0.0369 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 210 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.3311 39.0928 -36.6555 REMARK 3 T TENSOR REMARK 3 T11: 0.0233 T22: 0.0155 REMARK 3 T33: 0.0670 T12: -0.0003 REMARK 3 T13: 0.0038 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.1822 L22: 0.3176 REMARK 3 L33: 0.2069 L12: 0.0408 REMARK 3 L13: 0.0384 L23: -0.0528 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.0088 S13: 0.0985 REMARK 3 S21: 0.0139 S22: 0.0090 S23: 0.1378 REMARK 3 S31: -0.0392 S32: -0.0364 S33: -0.0357 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 254 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7776 37.5207 -32.4976 REMARK 3 T TENSOR REMARK 3 T11: 0.0472 T22: 0.0374 REMARK 3 T33: 0.0261 T12: 0.0130 REMARK 3 T13: -0.0112 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.4189 L22: 0.3633 REMARK 3 L33: 0.4564 L12: -0.0328 REMARK 3 L13: 0.2644 L23: -0.1628 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.0628 S13: 0.0509 REMARK 3 S21: 0.0053 S22: -0.0125 S23: -0.0219 REMARK 3 S31: 0.0184 S32: 0.1172 S33: -0.0497 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244697. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84598 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.28600 REMARK 200 R SYM FOR SHELL (I) : 0.26100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6DY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS 6.5, 0.2 M AMMONIUM ACETATE, REMARK 280 28% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.26350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 210 REMARK 465 ASP A 211 REMARK 465 ASP A 212 REMARK 465 ASP A 213 REMARK 465 VAL B 31 REMARK 465 ASP B 211 REMARK 465 ASP B 212 REMARK 465 ASP B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 LYS A 87 CE NZ REMARK 470 LEU A 102 CD1 CD2 REMARK 470 LYS A 109 NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 LYS A 207 CE NZ REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 LYS A 245 CD CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 LYS B 87 CE NZ REMARK 470 LYS B 109 NZ REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 LYS B 207 CE NZ REMARK 470 ILE B 210 CG1 CG2 CD1 REMARK 470 LYS B 227 CG CD CE NZ REMARK 470 SER B 244 CB OG REMARK 470 LYS B 245 CD CE NZ REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 LYS B 296 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 109 6.79 81.55 REMARK 500 GLU A 151 7.55 82.13 REMARK 500 LEU A 234 42.31 -78.34 REMARK 500 LYS B 109 5.76 81.68 REMARK 500 GLU B 151 5.33 82.54 REMARK 500 LEU B 234 41.93 -84.11 REMARK 500 LYS B 259 -45.74 -133.22 REMARK 500 LEU B 321 -169.11 -77.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 928 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 929 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 930 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 902 DISTANCE = 5.91 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q8S A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q8S B 401 DBREF 6UJ4 A 31 334 UNP P61964 WDR5_HUMAN 31 334 DBREF 6UJ4 B 31 334 UNP P61964 WDR5_HUMAN 31 334 SEQRES 1 A 304 VAL LYS PRO ASN TYR ALA LEU LYS PHE THR LEU ALA GLY SEQRES 2 A 304 HIS THR LYS ALA VAL SER SER VAL LYS PHE SER PRO ASN SEQRES 3 A 304 GLY GLU TRP LEU ALA SER SER SER ALA ASP LYS LEU ILE SEQRES 4 A 304 LYS ILE TRP GLY ALA TYR ASP GLY LYS PHE GLU LYS THR SEQRES 5 A 304 ILE SER GLY HIS LYS LEU GLY ILE SER ASP VAL ALA TRP SEQRES 6 A 304 SER SER ASP SER ASN LEU LEU VAL SER ALA SER ASP ASP SEQRES 7 A 304 LYS THR LEU LYS ILE TRP ASP VAL SER SER GLY LYS CYS SEQRES 8 A 304 LEU LYS THR LEU LYS GLY HIS SER ASN TYR VAL PHE CYS SEQRES 9 A 304 CYS ASN PHE ASN PRO GLN SER ASN LEU ILE VAL SER GLY SEQRES 10 A 304 SER PHE ASP GLU SER VAL ARG ILE TRP ASP VAL LYS THR SEQRES 11 A 304 GLY LYS CYS LEU LYS THR LEU PRO ALA HIS SER ASP PRO SEQRES 12 A 304 VAL SER ALA VAL HIS PHE ASN ARG ASP GLY SER LEU ILE SEQRES 13 A 304 VAL SER SER SER TYR ASP GLY LEU CYS ARG ILE TRP ASP SEQRES 14 A 304 THR ALA SER GLY GLN CYS LEU LYS THR LEU ILE ASP ASP SEQRES 15 A 304 ASP ASN PRO PRO VAL SER PHE VAL LYS PHE SER PRO ASN SEQRES 16 A 304 GLY LYS TYR ILE LEU ALA ALA THR LEU ASP ASN THR LEU SEQRES 17 A 304 LYS LEU TRP ASP TYR SER LYS GLY LYS CYS LEU LYS THR SEQRES 18 A 304 TYR THR GLY HIS LYS ASN GLU LYS TYR CYS ILE PHE ALA SEQRES 19 A 304 ASN PHE SER VAL THR GLY GLY LYS TRP ILE VAL SER GLY SEQRES 20 A 304 SER GLU ASP ASN LEU VAL TYR ILE TRP ASN LEU GLN THR SEQRES 21 A 304 LYS GLU ILE VAL GLN LYS LEU GLN GLY HIS THR ASP VAL SEQRES 22 A 304 VAL ILE SER THR ALA CYS HIS PRO THR GLU ASN ILE ILE SEQRES 23 A 304 ALA SER ALA ALA LEU GLU ASN ASP LYS THR ILE LYS LEU SEQRES 24 A 304 TRP LYS SER ASP CYS SEQRES 1 B 304 VAL LYS PRO ASN TYR ALA LEU LYS PHE THR LEU ALA GLY SEQRES 2 B 304 HIS THR LYS ALA VAL SER SER VAL LYS PHE SER PRO ASN SEQRES 3 B 304 GLY GLU TRP LEU ALA SER SER SER ALA ASP LYS LEU ILE SEQRES 4 B 304 LYS ILE TRP GLY ALA TYR ASP GLY LYS PHE GLU LYS THR SEQRES 5 B 304 ILE SER GLY HIS LYS LEU GLY ILE SER ASP VAL ALA TRP SEQRES 6 B 304 SER SER ASP SER ASN LEU LEU VAL SER ALA SER ASP ASP SEQRES 7 B 304 LYS THR LEU LYS ILE TRP ASP VAL SER SER GLY LYS CYS SEQRES 8 B 304 LEU LYS THR LEU LYS GLY HIS SER ASN TYR VAL PHE CYS SEQRES 9 B 304 CYS ASN PHE ASN PRO GLN SER ASN LEU ILE VAL SER GLY SEQRES 10 B 304 SER PHE ASP GLU SER VAL ARG ILE TRP ASP VAL LYS THR SEQRES 11 B 304 GLY LYS CYS LEU LYS THR LEU PRO ALA HIS SER ASP PRO SEQRES 12 B 304 VAL SER ALA VAL HIS PHE ASN ARG ASP GLY SER LEU ILE SEQRES 13 B 304 VAL SER SER SER TYR ASP GLY LEU CYS ARG ILE TRP ASP SEQRES 14 B 304 THR ALA SER GLY GLN CYS LEU LYS THR LEU ILE ASP ASP SEQRES 15 B 304 ASP ASN PRO PRO VAL SER PHE VAL LYS PHE SER PRO ASN SEQRES 16 B 304 GLY LYS TYR ILE LEU ALA ALA THR LEU ASP ASN THR LEU SEQRES 17 B 304 LYS LEU TRP ASP TYR SER LYS GLY LYS CYS LEU LYS THR SEQRES 18 B 304 TYR THR GLY HIS LYS ASN GLU LYS TYR CYS ILE PHE ALA SEQRES 19 B 304 ASN PHE SER VAL THR GLY GLY LYS TRP ILE VAL SER GLY SEQRES 20 B 304 SER GLU ASP ASN LEU VAL TYR ILE TRP ASN LEU GLN THR SEQRES 21 B 304 LYS GLU ILE VAL GLN LYS LEU GLN GLY HIS THR ASP VAL SEQRES 22 B 304 VAL ILE SER THR ALA CYS HIS PRO THR GLU ASN ILE ILE SEQRES 23 B 304 ALA SER ALA ALA LEU GLU ASN ASP LYS THR ILE LYS LEU SEQRES 24 B 304 TRP LYS SER ASP CYS HET Q8S A 401 24 HET Q8S B 401 24 HETNAM Q8S 5-BROMO-3-CHLORO-N-(1-CYCLOPENTYL-2-METHYL-1H-IMIDAZOL- HETNAM 2 Q8S 4-YL)-2-HYDROXYBENZENE-1-SULFONAMIDE FORMUL 3 Q8S 2(C15 H17 BR CL N3 O3 S) FORMUL 5 HOH *832(H2 O) SHEET 1 AA1 4 ALA A 36 LEU A 41 0 SHEET 2 AA1 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA1 4 ILE A 315 ALA A 320 -1 N ILE A 316 O TRP A 330 SHEET 4 AA1 4 VAL A 304 CYS A 309 -1 N ALA A 308 O ALA A 317 SHEET 1 AA2 4 VAL A 48 PHE A 53 0 SHEET 2 AA2 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 AA2 4 ILE A 69 GLY A 73 -1 O TRP A 72 N LEU A 60 SHEET 4 AA2 4 PHE A 79 ILE A 83 -1 O ILE A 83 N ILE A 69 SHEET 1 AA3 4 ILE A 90 TRP A 95 0 SHEET 2 AA3 4 LEU A 101 SER A 106 -1 O ALA A 105 N ASP A 92 SHEET 3 AA3 4 THR A 110 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 AA3 4 CYS A 121 LYS A 126 -1 O LEU A 122 N ILE A 113 SHEET 1 AA4 4 VAL A 132 PHE A 137 0 SHEET 2 AA4 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AA4 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 AA4 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 AA5 4 VAL A 174 PHE A 179 0 SHEET 2 AA5 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AA5 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 AA5 4 CYS A 205 LEU A 209 -1 O LEU A 209 N CYS A 195 SHEET 1 AA6 4 VAL A 217 PHE A 222 0 SHEET 2 AA6 4 TYR A 228 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 AA6 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 AA6 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AA7 4 ALA A 264 SER A 267 0 SHEET 2 AA7 4 TRP A 273 SER A 276 -1 O TRP A 273 N SER A 267 SHEET 3 AA7 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 AA7 4 ILE A 293 LEU A 297 -1 O VAL A 294 N ILE A 285 SHEET 1 AA8 4 ALA B 36 LEU B 41 0 SHEET 2 AA8 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 AA8 4 ILE B 315 ALA B 320 -1 N ILE B 316 O TRP B 330 SHEET 4 AA8 4 VAL B 304 CYS B 309 -1 N ALA B 308 O ALA B 317 SHEET 1 AA9 4 VAL B 48 PHE B 53 0 SHEET 2 AA9 4 TRP B 59 SER B 64 -1 O ALA B 61 N LYS B 52 SHEET 3 AA9 4 LEU B 68 GLY B 73 -1 O TRP B 72 N LEU B 60 SHEET 4 AA9 4 PHE B 79 SER B 84 -1 O GLU B 80 N ILE B 71 SHEET 1 AB1 4 ILE B 90 TRP B 95 0 SHEET 2 AB1 4 LEU B 101 SER B 106 -1 O ALA B 105 N SER B 91 SHEET 3 AB1 4 LEU B 111 ASP B 115 -1 O TRP B 114 N LEU B 102 SHEET 4 AB1 4 CYS B 121 LEU B 125 -1 O LEU B 125 N LEU B 111 SHEET 1 AB2 4 VAL B 132 PHE B 137 0 SHEET 2 AB2 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 AB2 4 VAL B 153 ASP B 157 -1 O TRP B 156 N ILE B 144 SHEET 4 AB2 4 CYS B 163 LEU B 167 -1 O LEU B 167 N VAL B 153 SHEET 1 AB3 4 VAL B 174 PHE B 179 0 SHEET 2 AB3 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 AB3 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 AB3 4 CYS B 205 LEU B 209 -1 O LEU B 209 N CYS B 195 SHEET 1 AB4 4 VAL B 217 PHE B 222 0 SHEET 2 AB4 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 AB4 4 THR B 237 ASP B 242 -1 O TRP B 241 N ILE B 229 SHEET 4 AB4 4 LYS B 247 TYR B 252 -1 O LEU B 249 N LEU B 240 SHEET 1 AB5 4 ALA B 264 SER B 267 0 SHEET 2 AB5 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 AB5 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 AB5 4 ILE B 293 LEU B 297 -1 O VAL B 294 N ILE B 285 SITE 1 AC1 11 SER A 223 PRO A 224 ASN A 225 TYR A 228 SITE 2 AC1 11 LEU A 240 PHE A 266 SER A 267 VAL A 268 SITE 3 AC1 11 TRP A 273 LEU A 288 GLN A 289 SITE 1 AC2 11 SER B 223 PRO B 224 ASN B 225 TYR B 228 SITE 2 AC2 11 LEU B 240 PHE B 266 SER B 267 VAL B 268 SITE 3 AC2 11 TRP B 273 LEU B 288 GLN B 289 CRYST1 46.674 96.527 64.944 90.00 90.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021425 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010360 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015398 0.00000