HEADER FLUORESCENT PROTEIN 05-OCT-19 6UKL TITLE CRYSTAL STRUCTURE OF A DIB2-SPLIT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE LIPOPROTEIN BLC; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT (UNP RESIDUES 23-109); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: OUTER MEMBRANE LIPOPROTEIN BLC; COMPND 8 CHAIN: D, F, B; COMPND 9 FRAGMENT: C-TERMINAL FRAGMENT (UNP RESIDUES 110-177); COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLC, Z5756, ECS5130; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XJB(DE3) AUTOLYSIS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 GENE: BLC, Z5756, ECS5130; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: XJB(DE3) AUTOLYSIS; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMRBAD KEYWDS LIPOCALIN, BETA BARREL, SPLIT PROTEIN, FLUOROGEN ACTIVATING PROTEIN, KEYWDS 2 FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.G.BOZHANOVA,J.MEILER REVDAT 3 11-OCT-23 6UKL 1 REMARK REVDAT 2 22-JUL-20 6UKL 1 JRNL REVDAT 1 08-JUL-20 6UKL 0 JRNL AUTH N.G.BOZHANOVA,A.S.GAVRIKOV,A.S.MISHIN,J.MEILER JRNL TITL DIB-SPLITS: NATURE-GUIDED DESIGN OF A NOVEL FLUORESCENT JRNL TITL 2 LABELING SPLIT SYSTEM. JRNL REF SCI REP V. 10 11049 2020 JRNL REFN ESSN 2045-2322 JRNL PMID 32632329 JRNL DOI 10.1038/S41598-020-67095-2 REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1885 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.02 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2701 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 142 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : 0.21000 REMARK 3 B33 (A**2) : -0.70000 REMARK 3 B12 (A**2) : 0.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3938 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3496 ; 0.035 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5355 ; 1.689 ; 1.673 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8052 ; 2.337 ; 1.596 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 454 ; 7.494 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 235 ;29.997 ;20.383 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 603 ;15.604 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;21.805 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 462 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4384 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 965 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1828 ; 3.212 ; 3.490 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1826 ; 3.214 ; 3.486 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2275 ; 4.284 ; 5.208 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6UKL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39425 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 72.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1QWD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 0.1 M MES, PH REMARK 280 4.5, SUPPLEMENTED WITH 10% 0.1 M IRON(III) CHLORIDE HEXAHYDRATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 144.19467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.09733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.09733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 144.19467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH F 211 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 GLY A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 SER A 13 REMARK 465 THR A 14 REMARK 465 SER A 15 REMARK 465 LEU A 16 REMARK 465 TYR A 17 REMARK 465 LYS A 18 REMARK 465 LYS A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 MET C 3 REMARK 465 GLY C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 LEU C 11 REMARK 465 GLU C 12 REMARK 465 SER C 13 REMARK 465 THR C 14 REMARK 465 SER C 15 REMARK 465 LEU C 16 REMARK 465 TYR C 17 REMARK 465 LYS C 18 REMARK 465 LYS C 19 REMARK 465 SER C 20 REMARK 465 SER C 21 REMARK 465 SER C 22 REMARK 465 THR C 23 REMARK 465 MET E 3 REMARK 465 GLY E 4 REMARK 465 HIS E 5 REMARK 465 HIS E 6 REMARK 465 HIS E 7 REMARK 465 HIS E 8 REMARK 465 HIS E 9 REMARK 465 HIS E 10 REMARK 465 LEU E 11 REMARK 465 GLU E 12 REMARK 465 SER E 13 REMARK 465 THR E 14 REMARK 465 SER E 15 REMARK 465 LEU E 16 REMARK 465 TYR E 17 REMARK 465 LYS E 18 REMARK 465 LYS E 19 REMARK 465 SER E 20 REMARK 465 SER E 21 REMARK 465 SER E 22 REMARK 465 MET D 109 REMARK 465 MET F 109 REMARK 465 GLY F 110 REMARK 465 PRO F 111 REMARK 465 MET B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 PHE B 112 REMARK 465 TYR B 113 REMARK 465 SER B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA C 102 48.00 -85.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM E 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 DBREF 6UKL A 23 109 UNP P0A902 BLC_ECO57 23 109 DBREF 6UKL C 23 109 UNP P0A902 BLC_ECO57 23 109 DBREF 6UKL E 23 109 UNP P0A902 BLC_ECO57 23 109 DBREF 6UKL D 110 177 UNP P0A902 BLC_ECO57 110 177 DBREF 6UKL F 110 177 UNP P0A902 BLC_ECO57 110 177 DBREF 6UKL B 110 177 UNP P0A902 BLC_ECO57 110 177 SEQADV 6UKL MET A 3 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLY A 4 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 5 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 6 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 7 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 8 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 9 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS A 10 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU A 11 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLU A 12 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER A 13 UNP P0A902 EXPRESSION TAG SEQADV 6UKL THR A 14 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER A 15 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU A 16 UNP P0A902 EXPRESSION TAG SEQADV 6UKL TYR A 17 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS A 18 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS A 19 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER A 20 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER A 21 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER A 22 UNP P0A902 EXPRESSION TAG SEQADV 6UKL CYS A 36 UNP P0A902 ALA 36 ENGINEERED MUTATION SEQADV 6UKL MET C 3 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLY C 4 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 5 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 6 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 7 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 8 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 9 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS C 10 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU C 11 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLU C 12 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER C 13 UNP P0A902 EXPRESSION TAG SEQADV 6UKL THR C 14 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER C 15 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU C 16 UNP P0A902 EXPRESSION TAG SEQADV 6UKL TYR C 17 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS C 18 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS C 19 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER C 20 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER C 21 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER C 22 UNP P0A902 EXPRESSION TAG SEQADV 6UKL CYS C 36 UNP P0A902 ALA 36 ENGINEERED MUTATION SEQADV 6UKL MET E 3 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLY E 4 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 5 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 6 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 7 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 8 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 9 UNP P0A902 EXPRESSION TAG SEQADV 6UKL HIS E 10 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU E 11 UNP P0A902 EXPRESSION TAG SEQADV 6UKL GLU E 12 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER E 13 UNP P0A902 EXPRESSION TAG SEQADV 6UKL THR E 14 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER E 15 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LEU E 16 UNP P0A902 EXPRESSION TAG SEQADV 6UKL TYR E 17 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS E 18 UNP P0A902 EXPRESSION TAG SEQADV 6UKL LYS E 19 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER E 20 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER E 21 UNP P0A902 EXPRESSION TAG SEQADV 6UKL SER E 22 UNP P0A902 EXPRESSION TAG SEQADV 6UKL CYS E 36 UNP P0A902 ALA 36 ENGINEERED MUTATION SEQADV 6UKL MET D 109 UNP P0A902 INITIATING METHIONINE SEQADV 6UKL MET F 109 UNP P0A902 INITIATING METHIONINE SEQADV 6UKL MET B 109 UNP P0A902 INITIATING METHIONINE SEQRES 1 A 107 MET GLY HIS HIS HIS HIS HIS HIS LEU GLU SER THR SER SEQRES 2 A 107 LEU TYR LYS LYS SER SER SER THR PRO PRO ARG GLY VAL SEQRES 3 A 107 THR VAL VAL ASN ASN PHE ASP CYS LYS ARG TYR LEU GLY SEQRES 4 A 107 THR TRP TYR GLU ILE ALA ARG PHE ASP HIS ARG PHE GLU SEQRES 5 A 107 ARG GLY LEU GLU LYS VAL THR ALA THR TYR SER LEU ARG SEQRES 6 A 107 ASP ASP GLY GLY LEU ASN VAL ILE ASN LYS GLY TYR ASN SEQRES 7 A 107 PRO ASP ARG GLY MET TRP GLN GLN SER GLU GLY LYS ALA SEQRES 8 A 107 TYR PHE THR GLY ALA PRO THR ARG ALA ALA LEU LYS VAL SEQRES 9 A 107 SER PHE PHE SEQRES 1 C 107 MET GLY HIS HIS HIS HIS HIS HIS LEU GLU SER THR SER SEQRES 2 C 107 LEU TYR LYS LYS SER SER SER THR PRO PRO ARG GLY VAL SEQRES 3 C 107 THR VAL VAL ASN ASN PHE ASP CYS LYS ARG TYR LEU GLY SEQRES 4 C 107 THR TRP TYR GLU ILE ALA ARG PHE ASP HIS ARG PHE GLU SEQRES 5 C 107 ARG GLY LEU GLU LYS VAL THR ALA THR TYR SER LEU ARG SEQRES 6 C 107 ASP ASP GLY GLY LEU ASN VAL ILE ASN LYS GLY TYR ASN SEQRES 7 C 107 PRO ASP ARG GLY MET TRP GLN GLN SER GLU GLY LYS ALA SEQRES 8 C 107 TYR PHE THR GLY ALA PRO THR ARG ALA ALA LEU LYS VAL SEQRES 9 C 107 SER PHE PHE SEQRES 1 E 107 MET GLY HIS HIS HIS HIS HIS HIS LEU GLU SER THR SER SEQRES 2 E 107 LEU TYR LYS LYS SER SER SER THR PRO PRO ARG GLY VAL SEQRES 3 E 107 THR VAL VAL ASN ASN PHE ASP CYS LYS ARG TYR LEU GLY SEQRES 4 E 107 THR TRP TYR GLU ILE ALA ARG PHE ASP HIS ARG PHE GLU SEQRES 5 E 107 ARG GLY LEU GLU LYS VAL THR ALA THR TYR SER LEU ARG SEQRES 6 E 107 ASP ASP GLY GLY LEU ASN VAL ILE ASN LYS GLY TYR ASN SEQRES 7 E 107 PRO ASP ARG GLY MET TRP GLN GLN SER GLU GLY LYS ALA SEQRES 8 E 107 TYR PHE THR GLY ALA PRO THR ARG ALA ALA LEU LYS VAL SEQRES 9 E 107 SER PHE PHE SEQRES 1 D 69 MET GLY PRO PHE TYR GLY GLY TYR ASN VAL ILE ALA LEU SEQRES 2 D 69 ASP ARG GLU TYR ARG HIS ALA LEU VAL CYS GLY PRO ASP SEQRES 3 D 69 ARG ASP TYR LEU TRP ILE LEU SER ARG THR PRO THR ILE SEQRES 4 D 69 SER ASP GLU VAL LYS GLN GLU MET LEU ALA VAL ALA THR SEQRES 5 D 69 ARG GLU GLY PHE ASP VAL SER LYS PHE ILE TRP VAL GLN SEQRES 6 D 69 GLN PRO GLY SER SEQRES 1 F 69 MET GLY PRO PHE TYR GLY GLY TYR ASN VAL ILE ALA LEU SEQRES 2 F 69 ASP ARG GLU TYR ARG HIS ALA LEU VAL CYS GLY PRO ASP SEQRES 3 F 69 ARG ASP TYR LEU TRP ILE LEU SER ARG THR PRO THR ILE SEQRES 4 F 69 SER ASP GLU VAL LYS GLN GLU MET LEU ALA VAL ALA THR SEQRES 5 F 69 ARG GLU GLY PHE ASP VAL SER LYS PHE ILE TRP VAL GLN SEQRES 6 F 69 GLN PRO GLY SER SEQRES 1 B 69 MET GLY PRO PHE TYR GLY GLY TYR ASN VAL ILE ALA LEU SEQRES 2 B 69 ASP ARG GLU TYR ARG HIS ALA LEU VAL CYS GLY PRO ASP SEQRES 3 B 69 ARG ASP TYR LEU TRP ILE LEU SER ARG THR PRO THR ILE SEQRES 4 B 69 SER ASP GLU VAL LYS GLN GLU MET LEU ALA VAL ALA THR SEQRES 5 B 69 ARG GLU GLY PHE ASP VAL SER LYS PHE ILE TRP VAL GLN SEQRES 6 B 69 GLN PRO GLY SER HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 C 203 5 HET SO4 C 204 5 HET MES C 205 12 HET SO4 E 201 5 HET SO4 E 202 5 HET HEM E 203 43 HET SO4 D 201 5 HET SO4 D 202 5 HET MES D 203 12 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HETNAM SO4 SULFATE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 7 SO4 15(O4 S 2-) FORMUL 15 MES 2(C6 H13 N O4 S) FORMUL 18 HEM C34 H32 FE N4 O4 FORMUL 25 HOH *106(H2 O) HELIX 1 AA1 ASP A 35 LEU A 40 1 6 HELIX 2 AA2 ASP C 35 LEU C 40 1 6 HELIX 3 AA3 ASP E 35 LEU E 40 1 6 HELIX 4 AA4 HIS E 51 ARG E 55 5 5 HELIX 5 AA5 SER D 148 GLU D 162 1 15 HELIX 6 AA6 ASP D 165 PHE D 169 5 5 HELIX 7 AA7 SER F 148 GLU F 162 1 15 HELIX 8 AA8 ASP F 165 PHE F 169 5 5 HELIX 9 AA9 SER B 148 GLU B 162 1 15 HELIX 10 AB1 ASP B 165 SER B 167 5 3 SHEET 1 AA110 PHE B 169 TRP B 171 0 SHEET 2 AA110 GLY A 41 PHE A 49 -1 N ARG A 48 O ILE B 170 SHEET 3 AA110 LEU B 138 SER B 142 -1 O SER B 142 N TYR A 44 SHEET 4 AA110 HIS B 127 CYS B 131 -1 N ALA B 128 O LEU B 141 SHEET 5 AA110 GLY B 115 LEU B 121 -1 N ALA B 120 O LEU B 129 SHEET 6 AA110 ALA A 103 PHE A 108 -1 N LEU A 104 O TYR B 116 SHEET 7 AA110 MET A 85 PHE A 95 -1 N LYS A 92 O SER A 107 SHEET 8 AA110 LEU A 72 ASN A 80 -1 N LEU A 72 O ALA A 93 SHEET 9 AA110 GLU A 58 LEU A 66 -1 N GLU A 58 O TYR A 79 SHEET 10 AA110 GLY A 41 PHE A 49 -1 N TRP A 43 O ALA A 62 SHEET 1 AA210 ILE D 170 TRP D 171 0 SHEET 2 AA210 GLY C 41 ARG C 48 -1 N ARG C 48 O ILE D 170 SHEET 3 AA210 LEU D 138 SER D 142 -1 O SER D 142 N TYR C 44 SHEET 4 AA210 HIS D 127 CYS D 131 -1 N VAL D 130 O TRP D 139 SHEET 5 AA210 TYR D 113 LEU D 121 -1 N ALA D 120 O LEU D 129 SHEET 6 AA210 ALA C 103 SER C 107 -1 N LEU C 104 O TYR D 116 SHEET 7 AA210 MET C 85 PHE C 95 -1 N TYR C 94 O LYS C 105 SHEET 8 AA210 LEU C 72 ASN C 80 -1 N VAL C 74 O GLY C 91 SHEET 9 AA210 GLU C 58 LEU C 66 -1 N GLU C 58 O TYR C 79 SHEET 10 AA210 GLY C 41 ARG C 48 -1 N TRP C 43 O ALA C 62 SHEET 1 AA310 ILE F 170 TRP F 171 0 SHEET 2 AA310 GLY E 41 ARG E 48 -1 N ARG E 48 O ILE F 170 SHEET 3 AA310 LEU F 138 SER F 142 -1 O SER F 142 N TYR E 44 SHEET 4 AA310 HIS F 127 CYS F 131 -1 N ALA F 128 O LEU F 141 SHEET 5 AA310 GLY F 115 LEU F 121 -1 N ILE F 119 O LEU F 129 SHEET 6 AA310 ALA E 103 SER E 107 -1 N LEU E 104 O TYR F 116 SHEET 7 AA310 MET E 85 PHE E 95 -1 N LYS E 92 O SER E 107 SHEET 8 AA310 LEU E 72 ASN E 80 -1 N GLY E 78 O GLN E 87 SHEET 9 AA310 GLU E 58 LEU E 66 -1 N GLU E 58 O TYR E 79 SHEET 10 AA310 GLY E 41 ARG E 48 -1 N TRP E 43 O ALA E 62 SITE 1 AC1 3 HIS A 51 ARG A 52 ARG A 55 SITE 1 AC2 2 ARG A 38 GLU B 124 SITE 1 AC3 6 ARG A 26 ARG A 48 ASP A 50 ARG A 55 SITE 2 AC3 6 GLY A 56 ILE B 170 SITE 1 AC4 2 ARG A 67 LYS A 92 SITE 1 AC5 4 ASN A 80 ARG A 83 ASN C 80 ARG C 83 SITE 1 AC6 3 HIS C 51 ARG C 52 ARG C 55 SITE 1 AC7 5 ASN A 33 THR C 29 VAL C 30 ASN C 32 SITE 2 AC7 5 ARG C 101 SITE 1 AC8 2 GLY C 41 THR C 42 SITE 1 AC9 9 ARG C 48 HIS C 51 PHE C 53 GLU C 54 SITE 2 AC9 9 ASN C 76 PHE C 108 HOH C 301 PHE D 112 SITE 3 AC9 9 TRP D 139 SITE 1 AD1 3 ASN C 33 ARG E 67 LYS E 92 SITE 1 AD2 2 HIS E 51 ARG E 52 SITE 1 AD3 18 SER D 148 GLU D 150 GLU E 45 PHE E 53 SITE 2 AD3 18 GLU E 54 LEU E 57 VAL E 60 ASN E 76 SITE 3 AD3 18 LYS E 77 GLY E 78 SER E 89 PHE E 108 SITE 4 AD3 18 HOH E 301 TYR F 113 GLY F 114 GLY F 115 SITE 5 AD3 18 TYR F 137 TRP F 139 SITE 1 AD4 2 PRO A 24 ARG D 161 SITE 1 AD5 2 ARG D 126 HIS D 127 SITE 1 AD6 5 PRO D 111 PHE D 112 TYR D 113 TYR D 137 SITE 2 AD6 5 HOH D 316 SITE 1 AD7 3 PRO A 25 ASP B 134 ARG B 135 SITE 1 AD8 2 ARG B 126 HIS B 127 SITE 1 AD9 4 ASP B 122 ARG B 123 GLU B 124 ARG C 26 CRYST1 68.241 68.241 216.292 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014654 0.008460 0.000000 0.00000 SCALE2 0.000000 0.016921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004623 0.00000