HEADER IMMUNE SYSTEM 08-OCT-19 6ULN TITLE MOLECULAR BASIS FOR TUMOR INFILTRATING TCR RECOGNITION OF HOTSPOT TITLE 2 KRAS-G12D MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MHC CLASS I ANTIGEN,MHC CLASS I HISTOCOMPATIBILITY ANTIGEN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: GLY-ALA-ASP-GLY-VAL-GLY-LYS-SER-ALA; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: TCR-V-ALPHA-4*01; COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: TCR-V-BETA-5-6*01; COMPND 21 CHAIN: E; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-CW, HLA-C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 MOL_ID: 5; SOURCE 27 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 28 ORGANISM_COMMON: HUMAN; SOURCE 29 ORGANISM_TAXID: 9606; SOURCE 30 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HLA-C NEOANTIGEN KRAS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.D.SUN,M.J.W.SIM REVDAT 4 11-OCT-23 6ULN 1 LINK REVDAT 3 17-JUN-20 6ULN 1 JRNL REMARK REVDAT 2 10-JUN-20 6ULN 1 JRNL REVDAT 1 27-MAY-20 6ULN 0 JRNL AUTH M.J.W.SIM,J.LU,M.SPENCER,F.HOPKINS,E.TRAN,S.A.ROSENBERG, JRNL AUTH 2 E.O.LONG,P.D.SUN JRNL TITL HIGH-AFFINITY OLIGOCLONAL TCRS DEFINE EFFECTIVE ADOPTIVE T JRNL TITL 2 CELL THERAPY TARGETING MUTANT KRAS-G12D. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 12826 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32461371 JRNL DOI 10.1073/PNAS.1921964117 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 74547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 3706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.7100 - 5.9500 1.00 2834 139 0.1876 0.2058 REMARK 3 2 5.9500 - 4.7200 1.00 2769 143 0.1596 0.1786 REMARK 3 3 4.7200 - 4.1300 1.00 2758 141 0.1392 0.1487 REMARK 3 4 4.1300 - 3.7500 1.00 2761 131 0.1609 0.1748 REMARK 3 5 3.7500 - 3.4800 1.00 2707 158 0.1708 0.2029 REMARK 3 6 3.4800 - 3.2800 1.00 2740 159 0.1861 0.2355 REMARK 3 7 3.2800 - 3.1100 1.00 2726 151 0.1905 0.2231 REMARK 3 8 3.1100 - 2.9800 1.00 2712 144 0.1948 0.2253 REMARK 3 9 2.9800 - 2.8600 1.00 2739 137 0.1974 0.2287 REMARK 3 10 2.8600 - 2.7600 1.00 2731 147 0.1992 0.2548 REMARK 3 11 2.7600 - 2.6800 1.00 2701 151 0.2099 0.2563 REMARK 3 12 2.6800 - 2.6000 1.00 2687 159 0.2103 0.2905 REMARK 3 13 2.6000 - 2.5300 1.00 2727 148 0.2055 0.2967 REMARK 3 14 2.5300 - 2.4700 1.00 2687 149 0.2022 0.2290 REMARK 3 15 2.4700 - 2.4100 1.00 2748 120 0.2090 0.2537 REMARK 3 16 2.4100 - 2.3600 1.00 2744 149 0.2029 0.2306 REMARK 3 17 2.3600 - 2.3200 1.00 2702 125 0.1950 0.2359 REMARK 3 18 2.3200 - 2.2700 1.00 2702 150 0.1995 0.2424 REMARK 3 19 2.2700 - 2.2300 1.00 2720 149 0.1999 0.2313 REMARK 3 20 2.2300 - 2.1900 1.00 2715 128 0.2020 0.2310 REMARK 3 21 2.1900 - 2.1600 1.00 2750 138 0.2071 0.2554 REMARK 3 22 2.1600 - 2.1300 1.00 2686 133 0.2147 0.2769 REMARK 3 23 2.1300 - 2.0900 1.00 2717 144 0.2267 0.2855 REMARK 3 24 2.0900 - 2.0600 1.00 2705 145 0.2247 0.2714 REMARK 3 25 2.0600 - 2.0400 1.00 2710 126 0.2340 0.2583 REMARK 3 26 2.0400 - 2.0100 0.99 2663 142 0.2377 0.3078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.202 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.414 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6704 REMARK 3 ANGLE : 0.603 9099 REMARK 3 CHIRALITY : 0.045 949 REMARK 3 PLANARITY : 0.004 1199 REMARK 3 DIHEDRAL : 26.506 2470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ULN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244821. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75046 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 43.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.15200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.85100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NT6, 6AVG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M MOPS PH 7.1 AND REMARK 280 0.25M MGSO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.02850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -72.78700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 1 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLY D 3 REMARK 465 LEU D 4 REMARK 465 ASN D 194 REMARK 465 SER D 195 REMARK 465 ILE D 196 REMARK 465 ILE D 197 REMARK 465 PRO D 198 REMARK 465 GLU D 199 REMARK 465 ASP D 200 REMARK 465 THR D 201 REMARK 465 PHE D 202 REMARK 465 PHE D 203 REMARK 465 PRO D 204 REMARK 465 SER D 205 REMARK 465 PRO D 206 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 ASP E 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -125.78 52.85 REMARK 500 ASN A 114 99.07 -162.65 REMARK 500 SER A 195 -160.05 -108.34 REMARK 500 GLN A 224 43.10 -96.64 REMARK 500 TRP B 60 -3.19 77.80 REMARK 500 HIS D 27 73.85 -151.75 REMARK 500 ASN D 33 30.08 -94.10 REMARK 500 TYR D 54 -64.14 -120.61 REMARK 500 ASN D 60 -165.95 -124.55 REMARK 500 ARG D 71 14.69 58.19 REMARK 500 ILE E 46 -66.97 -96.26 REMARK 500 TYR E 72 -9.23 84.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 521 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH E 558 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH E 559 DISTANCE = 8.45 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 421 O REMARK 620 2 HOH A 469 O 89.7 REMARK 620 3 HOH A 499 O 86.6 90.5 REMARK 620 4 ASP E 184 OD2 93.8 175.9 87.5 REMARK 620 5 HOH E 518 O 170.4 89.4 83.8 86.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 305 DBREF 6ULN A 1 274 UNP C1K0Y1 C1K0Y1_HUMAN 25 298 DBREF 6ULN B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6ULN C 1 9 UNP P01111 RASN_HUMAN 10 18 DBREF 6ULN D 1 206 PDB 6ULN 6ULN 1 206 DBREF 6ULN E 1 243 PDB 6ULN 6ULN 1 243 SEQADV 6ULN ASP C 3 UNP P01111 GLY 12 ENGINEERED MUTATION SEQRES 1 A 274 CYS SER HIS SER MET ARG TYR PHE TYR THR ALA VAL SER SEQRES 2 A 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR GLN PHE VAL GLN PHE ASP SER ASP SEQRES 4 A 274 ALA ALA SER PRO ARG GLY GLU PRO ARG ALA PRO TRP VAL SEQRES 5 A 274 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG GLU THR GLN SEQRES 6 A 274 LYS TYR LYS ARG GLN ALA GLN THR ASP ARG VAL SER LEU SEQRES 7 A 274 ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS THR LEU GLN ARG MET TYR GLY CYS ASP LEU GLY SEQRES 9 A 274 PRO ASP GLY ARG LEU LEU ARG GLY TYR ASN GLN PHE ALA SEQRES 10 A 274 TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 274 ARG SER TRP THR ALA ALA ASP LYS ALA ALA GLN ILE THR SEQRES 12 A 274 GLN ARG LYS TRP GLU ALA ALA ARG GLU ALA GLU GLN ARG SEQRES 13 A 274 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 A 274 ARG TYR LEU GLU ASN GLY LYS LYS THR LEU GLN ARG ALA SEQRES 15 A 274 GLU HIS PRO LYS THR HIS VAL THR HIS HIS PRO VAL SER SEQRES 16 A 274 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 274 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 274 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU PRO GLU PRO LEU THR LEU ARG SEQRES 22 A 274 TRP SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 GLY ALA ASP GLY VAL GLY LYS SER ALA SEQRES 1 D 206 MET ALA GLY LEU ALA LYS THR THR GLN PRO ILE SER VAL SEQRES 2 D 206 ASP SER TYR GLU GLY GLN GLU VAL ASN ILE THR CYS SER SEQRES 3 D 206 HIS ASN ASN ILE ALA THR ASN ASP TYR ILE THR TRP TYR SEQRES 4 D 206 GLN GLN PHE PRO SER GLN GLY PRO ARG PHE ILE ILE GLN SEQRES 5 D 206 GLY TYR LYS THR LYS VAL THR ASN GLU VAL ALA SER LEU SEQRES 6 D 206 PHE ILE PRO ALA ASP ARG LYS SER SER THR LEU SER LEU SEQRES 7 D 206 PRO ARG VAL SER LEU SER ASP THR ALA VAL TYR TYR CYS SEQRES 8 D 206 LEU VAL GLY ASP MET ASP GLN ALA GLY THR ALA LEU ILE SEQRES 9 D 206 PHE GLY LYS GLY THR THR LEU SER VAL SER SER ASP ILE SEQRES 10 D 206 GLN ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER SEQRES 11 D 206 LYS SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE SEQRES 12 D 206 ASP SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP SEQRES 13 D 206 VAL TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER SEQRES 14 D 206 MET ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN SEQRES 15 D 206 LYS SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER SEQRES 16 D 206 ILE ILE PRO GLU ASP THR PHE PHE PRO SER PRO SEQRES 1 E 243 MET ALA GLY VAL THR GLN SER PRO THR HIS LEU ILE LYS SEQRES 2 E 243 THR ARG GLY GLN GLN VAL THR LEU ARG CYS SER PRO LYS SEQRES 3 E 243 SER GLY HIS ASP THR VAL SER TRP TYR GLN GLN ALA LEU SEQRES 4 E 243 GLY GLN GLY PRO GLN PHE ILE PHE GLN TYR TYR GLU GLU SEQRES 5 E 243 GLU GLU ARG GLN ARG GLY ASN PHE PRO ASP ARG PHE SER SEQRES 6 E 243 GLY HIS GLN PHE PRO ASN TYR SER SER GLU LEU ASN VAL SEQRES 7 E 243 ASN ALA LEU LEU LEU GLY ASP SER ALA LEU TYR LEU CYS SEQRES 8 E 243 ALA SER SER LEU GLY GLN THR ASN TYR GLY TYR THR PHE SEQRES 9 E 243 GLY SER GLY THR ARG LEU THR VAL VAL GLU ASP LEU ARG SEQRES 10 E 243 ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER SEQRES 11 E 243 GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL SEQRES 12 E 243 CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU LEU SEQRES 13 E 243 SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL SEQRES 14 E 243 CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU SEQRES 15 E 243 ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SEQRES 16 E 243 SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG SEQRES 17 E 243 CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU SEQRES 18 E 243 TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SEQRES 19 E 243 SER ALA GLU ALA TRP GLY ARG ALA ASP HET SO4 A 301 5 HET GOL A 302 6 HET GOL B 101 6 HET GOL B 102 6 HET GOL D 301 6 HET MG E 301 1 HET MG E 302 1 HET SO4 E 303 5 HET GOL E 304 6 HET GOL E 305 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 6 SO4 2(O4 S 2-) FORMUL 7 GOL 6(C3 H8 O3) FORMUL 11 MG 2(MG 2+) FORMUL 16 HOH *425(H2 O) HELIX 1 AA1 ALA A 49 GLN A 54 1 6 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ARG A 151 1 15 HELIX 4 AA4 ARG A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 GLN A 180 1 6 HELIX 7 AA7 GLN A 224 THR A 228 5 5 HELIX 8 AA8 GLU A 253 ARG A 256 5 4 HELIX 9 AA9 SER D 82 THR D 86 5 5 HELIX 10 AB1 ARG D 168 ASP D 171 5 4 HELIX 11 AB2 LEU E 82 SER E 86 5 5 HELIX 12 AB3 ASP E 115 VAL E 119 5 5 HELIX 13 AB4 SER E 130 GLN E 138 1 9 HELIX 14 AB5 ALA E 197 GLN E 201 1 5 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N GLN A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N VAL A 28 O THR A 31 SHEET 4 AA1 8 SER A 4 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 THR A 94 LEU A 103 -1 O LEU A 95 N ALA A 11 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O LEU A 126 N ASN A 114 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA2 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 3 THR A 214 GLN A 218 0 SHEET 2 AA4 3 THR A 258 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 3 AA4 3 LEU A 270 ARG A 273 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 5 SER D 12 TYR D 16 0 SHEET 2 AA8 5 THR D 109 SER D 114 1 O THR D 110 N VAL D 13 SHEET 3 AA8 5 ALA D 87 ASP D 95 -1 N TYR D 89 O THR D 109 SHEET 4 AA8 5 ASP D 34 GLN D 41 -1 N TYR D 39 O TYR D 90 SHEET 5 AA8 5 ARG D 48 GLY D 53 -1 O GLY D 53 N ILE D 36 SHEET 1 AA9 4 VAL D 21 SER D 26 0 SHEET 2 AA9 4 SER D 73 LEU D 78 -1 O LEU D 78 N VAL D 21 SHEET 3 AA9 4 SER D 64 PHE D 66 -1 N PHE D 66 O THR D 75 SHEET 4 AA9 4 VAL D 58 THR D 59 -1 N VAL D 58 O LEU D 65 SHEET 1 AB1 8 VAL D 157 ILE D 159 0 SHEET 2 AB1 8 PHE D 172 SER D 181 -1 O TRP D 180 N TYR D 158 SHEET 3 AB1 8 SER D 136 THR D 141 -1 N CYS D 138 O ALA D 179 SHEET 4 AB1 8 ALA D 123 ASP D 129 -1 N LEU D 127 O VAL D 137 SHEET 5 AB1 8 GLU E 123 GLU E 128 -1 O GLU E 128 N ARG D 128 SHEET 6 AB1 8 LYS E 139 PHE E 149 -1 O VAL E 143 N PHE E 127 SHEET 7 AB1 8 TYR E 187 SER E 196 -1 O LEU E 193 N LEU E 142 SHEET 8 AB1 8 VAL E 169 THR E 171 -1 N CYS E 170 O ARG E 192 SHEET 1 AB2 8 CYS D 163 MET D 167 0 SHEET 2 AB2 8 PHE D 172 SER D 181 -1 O PHE D 172 N MET D 167 SHEET 3 AB2 8 SER D 136 THR D 141 -1 N CYS D 138 O ALA D 179 SHEET 4 AB2 8 ALA D 123 ASP D 129 -1 N LEU D 127 O VAL D 137 SHEET 5 AB2 8 GLU E 123 GLU E 128 -1 O GLU E 128 N ARG D 128 SHEET 6 AB2 8 LYS E 139 PHE E 149 -1 O VAL E 143 N PHE E 127 SHEET 7 AB2 8 TYR E 187 SER E 196 -1 O LEU E 193 N LEU E 142 SHEET 8 AB2 8 LEU E 176 LYS E 177 -1 N LEU E 176 O ALA E 188 SHEET 1 AB3 4 THR E 5 SER E 7 0 SHEET 2 AB3 4 VAL E 19 SER E 24 -1 O SER E 24 N THR E 5 SHEET 3 AB3 4 SER E 74 VAL E 78 -1 O LEU E 76 N LEU E 21 SHEET 4 AB3 4 PHE E 64 GLN E 68 -1 N SER E 65 O ASN E 77 SHEET 1 AB4 6 HIS E 10 THR E 14 0 SHEET 2 AB4 6 THR E 108 VAL E 113 1 O VAL E 113 N LYS E 13 SHEET 3 AB4 6 ALA E 87 SER E 94 -1 N TYR E 89 O THR E 108 SHEET 4 AB4 6 THR E 31 GLN E 37 -1 N SER E 33 O ALA E 92 SHEET 5 AB4 6 GLN E 44 TYR E 50 -1 O TYR E 49 N VAL E 32 SHEET 6 AB4 6 GLU E 53 ARG E 57 -1 O ARG E 55 N GLN E 48 SHEET 1 AB5 4 HIS E 10 THR E 14 0 SHEET 2 AB5 4 THR E 108 VAL E 113 1 O VAL E 113 N LYS E 13 SHEET 3 AB5 4 ALA E 87 SER E 94 -1 N TYR E 89 O THR E 108 SHEET 4 AB5 4 THR E 103 PHE E 104 -1 O THR E 103 N SER E 93 SHEET 1 AB6 4 LYS E 163 VAL E 165 0 SHEET 2 AB6 4 VAL E 154 VAL E 160 -1 N VAL E 160 O LYS E 163 SHEET 3 AB6 4 HIS E 206 PHE E 213 -1 O GLN E 210 N SER E 157 SHEET 4 AB6 4 GLN E 232 TRP E 239 -1 O VAL E 234 N VAL E 211 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.06 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 25 CYS D 91 1555 1555 2.07 SSBOND 5 CYS D 138 CYS D 188 1555 1555 2.02 SSBOND 6 CYS D 163 CYS E 170 1555 1555 2.52 SSBOND 7 CYS E 23 CYS E 91 1555 1555 2.04 SSBOND 8 CYS E 144 CYS E 209 1555 1555 2.03 LINK O HOH A 421 MG MG E 301 1555 1555 2.23 LINK O HOH A 469 MG MG E 301 1555 1555 2.20 LINK O HOH A 499 MG MG E 301 1555 1555 2.80 LINK OD2 ASP E 184 MG MG E 301 1555 1555 2.19 LINK MG MG E 301 O HOH E 518 1555 1555 2.28 CISPEP 1 TYR A 209 PRO A 210 0 0.61 CISPEP 2 HIS B 31 PRO B 32 0 1.43 CISPEP 3 SER E 7 PRO E 8 0 -5.71 CISPEP 4 TYR E 150 PRO E 151 0 -2.27 SITE 1 AC1 4 PHE A 8 TYR A 27 ASP A 30 TYR B 63 SITE 1 AC2 7 ASN A 127 ASP A 129 HOH A 437 HOH A 471 SITE 2 AC2 7 ARG E 117 PHE E 120 ARG E 226 SITE 1 AC3 6 VAL A 231 ARG A 234 GLN B 8 VAL B 9 SITE 2 AC3 6 MET B 99 HOH B 215 SITE 1 AC4 3 SER A 92 ILE B 1 HOH B 214 SITE 1 AC5 6 GLU A 128 HOH A 421 HOH A 469 HOH A 499 SITE 2 AC5 6 ASP E 184 HOH E 518 SITE 1 AC6 4 ARG D 168 VAL E 165 HIS E 166 SER E 167 SITE 1 AC7 4 ARG E 15 LEU E 82 LEU E 83 GLY E 84 SITE 1 AC8 3 ARG A 151 HIS E 29 HOH E 409 CRYST1 72.787 74.057 107.462 90.00 101.68 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013739 0.000000 0.002840 0.00000 SCALE2 0.000000 0.013503 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009502 0.00000