HEADER BIOSYNTHETIC PROTEIN 08-OCT-19 6ULX TITLE ADENYLATION DOMAIN OF A KETO ACID-SELECTING NRPS MODULE BOUND TO KETO TITLE 2 ACYL ADENYLATE SPACE GROUP P43212 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID ADENYLATION DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIRST ADENYLATION DOMAIN (UNP RESIDUES 83-649); COMPND 5 SYNONYM: WP_007498213; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS STRATOSPHERICUS LAMA 585; SOURCE 3 ORGANISM_TAXID: 1236481; SOURCE 4 GENE: C883_1060; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NRPS, NONRIBOSOMAL PEPTIDE SYNTHETASE, NON-RIBOSOMAL PEPTIDE KEYWDS 2 SYNTHETASE, ADENYLATION, ADENYLATION DOMAIN, DEPSIPEPTIDE, KEYWDS 3 CEREULIDE, VALINOMYCIN, NATURAL PRODUCT, ADENYLATE, KETO ACID, KEYWDS 4 KETOACID, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.ALONZO,C.CHICHE-LAPIERRE,T.M.SCHMEING REVDAT 4 13-MAR-24 6ULX 1 REMARK REVDAT 3 06-MAY-20 6ULX 1 JRNL REVDAT 2 04-MAR-20 6ULX 1 JRNL REVDAT 1 19-FEB-20 6ULX 0 JRNL AUTH D.A.ALONZO,C.CHICHE-LAPIERRE,M.J.TARRY,J.WANG,T.M.SCHMEING JRNL TITL STRUCTURAL BASIS OF KETO ACID UTILIZATION IN NONRIBOSOMAL JRNL TITL 2 DEPSIPEPTIDE SYNTHESIS. JRNL REF NAT.CHEM.BIOL. V. 16 493 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32066969 JRNL DOI 10.1038/S41589-020-0481-5 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 68 352 2012 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 66 213 2010 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20124702 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.J.MCCOY,R.W.GROSSE-KUNSTLEVE,P.D.ADAMS,M.D.WINN, REMARK 1 AUTH 2 L.C.STORONI,R.J.READ REMARK 1 TITL PHASER CRYSTALLOGRAPHIC SOFTWARE. REMARK 1 REF J APPL CRYSTALLOGR V. 40 658 2007 REMARK 1 REFN ISSN 0021-8898 REMARK 1 PMID 19461840 REMARK 1 DOI 10.1107/S0021889807021206 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 41750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.560 REMARK 3 FREE R VALUE TEST SET COUNT : 1905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.0300 - 5.5600 1.00 3092 148 0.2202 0.2336 REMARK 3 2 5.5600 - 4.4100 1.00 2936 140 0.1863 0.1913 REMARK 3 3 4.4100 - 3.8500 1.00 2871 138 0.1921 0.2234 REMARK 3 4 3.8500 - 3.5000 1.00 2883 137 0.2099 0.2484 REMARK 3 5 3.5000 - 3.2500 1.00 2848 137 0.2299 0.2728 REMARK 3 6 3.2500 - 3.0600 1.00 2838 135 0.2410 0.2759 REMARK 3 7 3.0600 - 2.9000 1.00 2848 135 0.2383 0.2630 REMARK 3 8 2.9000 - 2.7800 0.98 2778 133 0.2381 0.2911 REMARK 3 9 2.7800 - 2.6700 1.00 2818 136 0.2408 0.2937 REMARK 3 10 2.6700 - 2.5800 1.00 2790 132 0.2496 0.2617 REMARK 3 11 2.5800 - 2.5000 0.99 2806 135 0.2645 0.3082 REMARK 3 12 2.5000 - 2.4300 0.99 2770 133 0.2695 0.3183 REMARK 3 13 2.4300 - 2.3600 0.99 2785 132 0.2887 0.3115 REMARK 3 14 2.3600 - 2.3100 0.99 2782 134 0.3079 0.3441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.277 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.405 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4495 REMARK 3 ANGLE : 0.570 6119 REMARK 3 CHIRALITY : 0.043 677 REMARK 3 PLANARITY : 0.003 772 REMARK 3 DIHEDRAL : 13.733 2603 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ULX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 88.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.75 M AMMONIUM SULFATE, 22.5% V/V REMARK 280 GLYCEROL, 3% W/V TRIMETHYLAMINE N-OXIDE, PH 8.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.37350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.63700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.63700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.56025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.63700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.63700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.18675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.63700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.63700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 129.56025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.63700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.63700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.18675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.37350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SG CYS A 573 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 853 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 859 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 264 REMARK 465 THR A 265 REMARK 465 ARG A 576 REMARK 465 MET A 577 REMARK 465 GLU A 578 REMARK 465 ALA A 579 REMARK 465 SER A 580 REMARK 465 ALA A 581 REMARK 465 SER A 582 REMARK 465 ASP A 583 REMARK 465 GLU A 584 REMARK 465 LYS A 626 REMARK 465 HIS A 627 REMARK 465 ALA A 628 REMARK 465 PHE A 629 REMARK 465 PRO A 630 REMARK 465 LYS A 631 REMARK 465 THR A 632 REMARK 465 SER A 633 REMARK 465 SER A 634 REMARK 465 ASN A 654 REMARK 465 LEU A 655 REMARK 465 TYR A 656 REMARK 465 PHE A 657 REMARK 465 GLN A 658 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 620 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 SG CYS A 573 HG CYS A 573 8554 1.20 REMARK 500 CB CYS A 573 SG CYS A 573 8554 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 310 -64.30 -92.48 REMARK 500 ALA A 384 -16.66 106.45 REMARK 500 SER A 420 -151.09 86.74 REMARK 500 GLU A 447 -156.53 -139.88 REMARK 500 ASN A 506 78.61 -152.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QA7 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 713 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 714 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 716 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 717 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 718 DBREF 6ULX A 83 649 UNP M5R382 M5R382_9BACI 83 649 SEQADV 6ULX ALA A 650 UNP M5R382 EXPRESSION TAG SEQADV 6ULX ALA A 651 UNP M5R382 EXPRESSION TAG SEQADV 6ULX ALA A 652 UNP M5R382 EXPRESSION TAG SEQADV 6ULX GLU A 653 UNP M5R382 EXPRESSION TAG SEQADV 6ULX ASN A 654 UNP M5R382 EXPRESSION TAG SEQADV 6ULX LEU A 655 UNP M5R382 EXPRESSION TAG SEQADV 6ULX TYR A 656 UNP M5R382 EXPRESSION TAG SEQADV 6ULX PHE A 657 UNP M5R382 EXPRESSION TAG SEQADV 6ULX GLN A 658 UNP M5R382 EXPRESSION TAG SEQRES 1 A 576 PRO ALA LEU SER TYR GLY GLY ASP LEU ASP VAL THR GLN SEQRES 2 A 576 GLY ALA GLN THR LEU GLN ASP VAL LEU THR GLU ALA ALA SEQRES 3 A 576 LYS THR THR ASN GLY LEU THR TYR ILE VAL ASN SER LYS SEQRES 4 A 576 ASN GLU LEU THR GLN SER TYR ALA GLN LEU GLN GLY ASP SEQRES 5 A 576 ALA GLU ARG VAL LEU THR GLY LEU ARG ALA LEU GLY LEU SEQRES 6 A 576 LYS ALA GLY ASP PRO VAL PHE PHE GLN PHE SER SER ASN SEQRES 7 A 576 HIS ALA MET VAL THR ALA PHE TRP ALA CYS VAL LEU GLY SEQRES 8 A 576 GLY PHE VAL PRO THR LEU VAL SER ALA ALA PRO THR TYR SEQRES 9 A 576 ARG GLU MET ASN ALA ALA VAL LYS LYS LEU HIS HIS ALA SEQRES 10 A 576 TRP LYS LEU LEU GLU HIS PRO LEU ILE LEU THR ASP ASP SEQRES 11 A 576 SER LEU ILE GLU GLU VAL GLN GLY LEU ALA PHE LEU TRP SEQRES 12 A 576 HIS THR ASP GLN LEU ARG VAL ALA ALA VAL GLU PRO MET SEQRES 13 A 576 LEU THR LEU GLU ARG ASP THR ALA ALA HIS PRO ALA ALA SEQRES 14 A 576 PRO ASP ASP SER VAL PHE PHE ILE LEU THR SER GLY SER SEQRES 15 A 576 THR GLY MET PRO LYS CYS VAL GLU HIS SER HIS ARG SER SEQRES 16 A 576 VAL LEU ALA ASN VAL LYS GLY THR VAL ALA ALA ASN GLN SEQRES 17 A 576 PHE THR GLN GLU ASP VAL SER LEU ASP TRP MET PRO LEU SEQRES 18 A 576 ASP HIS ILE GLY GLY ILE VAL MET PHE HIS LEU VAL ASN SEQRES 19 A 576 VAL TYR THR GLY CYS GLU GLN ILE ARG ALA ARG THR ASP SEQRES 20 A 576 ASP PHE ILE ALA GLN PRO LEU ARG TRP LEU ASP TRP MET SEQRES 21 A 576 ASP ARG TYR ARG ALA THR LYS THR TRP ALA PRO ASN PHE SEQRES 22 A 576 ALA PHE ALA MET ILE ASN ASP TYR GLU LYS GLU ILE SER SEQRES 23 A 576 SER GLY SER TRP ASP LEU SER ALA MET THR CYS MET ILE SEQRES 24 A 576 ASN GLY ALA GLU ALA VAL VAL PRO LYS THR ILE HIS ARG SEQRES 25 A 576 PHE LEU HIS LEU LEU ALA PRO HIS GLY LEU LYS GLY ASP SEQRES 26 A 576 VAL ILE ARG PRO ALA PHE GLY MET SER GLU ILE SER SER SEQRES 27 A 576 ALA VAL VAL PHE SER PHE ALA ILE GLU ARG GLY ASP GLU SEQRES 28 A 576 ASN SER GLY VAL LEU THR PHE GLU GLU THR SER LEU THR SEQRES 29 A 576 GLU GLN LEU ARG PRO ALA GLU ALA ARG GLU THR GLY THR SEQRES 30 A 576 VAL SER PHE THR GLU LEU GLY LYS PRO ILE PRO GLY ILE SEQRES 31 A 576 THR ILE ARG ILE VAL ASN HIS GLN HIS GLU LEU LEU PRO SEQRES 32 A 576 GLU ASP HIS ILE GLY ARG VAL GLN ILE LYS GLY PRO THR SEQRES 33 A 576 THR MET LYS GLY TYR TYR ARG ASN ASP GLU ALA ASN GLN SEQRES 34 A 576 GLU VAL PHE GLN ALA ASP GLY TRP PHE HIS THR GLY ASP SEQRES 35 A 576 LEU GLY PHE LEU HIS GLU GLY ARG LEU THR LEU THR GLY SEQRES 36 A 576 ARG GLU LYS ASP MET ILE ILE ILE ASN GLY LYS ASN TYR SEQRES 37 A 576 HIS ASN TYR GLU ILE GLU ALA ILE ALA GLU GLU VAL PRO SEQRES 38 A 576 GLY VAL GLU THR SER PHE VAL ALA ALA CYS SER VAL ARG SEQRES 39 A 576 MET GLU ALA SER ALA SER ASP GLU LEU ILE LEU PHE PHE SEQRES 40 A 576 THR PRO LYS LEU TYR GLU PRO ALA TYR ILE MET ARG ALA SEQRES 41 A 576 SER GLN HIS ILE LYS SER HIS ILE ALA THR LYS MET GLY SEQRES 42 A 576 LEU SER ALA SER ARG ILE ILE PRO VAL GLN LYS HIS ALA SEQRES 43 A 576 PHE PRO LYS THR SER SER GLY LYS ILE GLU ARG ALA GLN SEQRES 44 A 576 LEU LYS THR ARG TRP GLN GLU GLY ALA ALA ALA GLU ASN SEQRES 45 A 576 LEU TYR PHE GLN HET QA7 A 701 52 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 A 704 5 HET SO4 A 705 5 HET SO4 A 706 5 HET SO4 A 707 5 HET SO4 A 708 5 HET SO4 A 709 5 HET SO4 A 710 5 HET SO4 A 711 5 HET SO4 A 712 5 HET SO4 A 713 5 HET SO4 A 714 5 HET SO4 A 715 5 HET SO4 A 716 5 HET SO4 A 717 5 HET SO4 A 718 5 HETNAM QA7 5'-O-{(S)-HYDROXY[(4-METHYL-2-OXOPENTANOYL) HETNAM 2 QA7 OXY]PHOSPHORYL}ADENOSINE HETNAM SO4 SULFATE ION FORMUL 2 QA7 C16 H22 N5 O9 P FORMUL 3 SO4 17(O4 S 2-) FORMUL 20 HOH *59(H2 O) HELIX 1 AA1 THR A 99 LYS A 109 1 11 HELIX 2 AA2 TYR A 128 LEU A 145 1 18 HELIX 3 AA3 SER A 159 GLY A 174 1 16 HELIX 4 AA4 ASN A 190 LEU A 203 1 14 HELIX 5 AA5 ASP A 211 GLN A 219 1 9 HELIX 6 AA6 GLY A 220 TRP A 225 1 6 HELIX 7 AA7 GLU A 236 LEU A 241 5 6 HELIX 8 AA8 HIS A 275 GLN A 290 1 16 HELIX 9 AA9 HIS A 305 VAL A 310 1 6 HELIX 10 AB1 PHE A 312 GLY A 320 1 9 HELIX 11 AB2 ARG A 327 GLN A 334 1 8 HELIX 12 AB3 LEU A 336 ARG A 346 1 11 HELIX 13 AB4 PRO A 353 ASP A 362 1 10 HELIX 14 AB5 TYR A 363 SER A 368 1 6 HELIX 15 AB6 VAL A 388 ALA A 400 1 13 HELIX 16 AB7 PRO A 401 GLY A 403 5 3 HELIX 17 AB8 SER A 416 SER A 419 5 4 HELIX 18 AB9 THR A 443 LEU A 445 5 3 HELIX 19 AC1 ASN A 506 PHE A 514 1 9 HELIX 20 AC2 GLN A 515 TRP A 519 5 5 HELIX 21 AC3 LYS A 540 MET A 542 5 3 HELIX 22 AC4 HIS A 551 VAL A 562 1 12 HELIX 23 AC5 GLU A 595 MET A 614 1 20 HELIX 24 AC6 SER A 617 ILE A 621 5 5 HELIX 25 AC7 GLN A 641 GLU A 653 1 13 SHEET 1 AA1 5 LEU A 85 TYR A 87 0 SHEET 2 AA1 5 THR A 473 VAL A 477 -1 O ILE A 474 N SER A 86 SHEET 3 AA1 5 GLY A 490 LYS A 495 -1 O ARG A 491 N VAL A 477 SHEET 4 AA1 5 PHE A 520 HIS A 529 -1 O PHE A 520 N ILE A 494 SHEET 5 AA1 5 ARG A 532 ARG A 538 -1 O THR A 536 N LEU A 525 SHEET 1 AA2 9 ASN A 122 SER A 127 0 SHEET 2 AA2 9 GLY A 113 ASN A 119 -1 N TYR A 116 O LEU A 124 SHEET 3 AA2 9 GLU A 322 ARG A 325 1 O ARG A 325 N THR A 115 SHEET 4 AA2 9 VAL A 296 ASP A 299 1 N SER A 297 O ILE A 324 SHEET 5 AA2 9 LYS A 349 ALA A 352 1 O LYS A 349 N LEU A 298 SHEET 6 AA2 9 CYS A 379 ASN A 382 1 O CYS A 379 N THR A 350 SHEET 7 AA2 9 ILE A 409 MET A 415 1 O ARG A 410 N MET A 380 SHEET 8 AA2 9 SER A 420 PHE A 424 -1 O SER A 420 N MET A 415 SHEET 9 AA2 9 LYS A 467 PRO A 468 -1 O LYS A 467 N PHE A 424 SHEET 1 AA3 7 VAL A 232 ALA A 234 0 SHEET 2 AA3 7 LEU A 207 THR A 210 1 N THR A 210 O ALA A 233 SHEET 3 AA3 7 PRO A 152 GLN A 156 1 N PHE A 154 O LEU A 209 SHEET 4 AA3 7 VAL A 176 LEU A 179 1 O THR A 178 N VAL A 153 SHEET 5 AA3 7 SER A 255 LEU A 260 1 O PHE A 258 N PRO A 177 SHEET 6 AA3 7 CYS A 270 SER A 274 -1 O VAL A 271 N ILE A 259 SHEET 7 AA3 7 GLY A 502 TYR A 503 -1 O GLY A 502 N GLU A 272 SHEET 1 AA4 2 VAL A 437 GLU A 441 0 SHEET 2 AA4 2 THR A 459 THR A 463 -1 O PHE A 462 N LEU A 438 SHEET 1 AA5 2 ILE A 543 ILE A 545 0 SHEET 2 AA5 2 LYS A 548 TYR A 550 -1 O LYS A 548 N ILE A 545 SHEET 1 AA6 3 VAL A 565 ALA A 571 0 SHEET 2 AA6 3 ILE A 586 PRO A 591 -1 O PHE A 588 N PHE A 569 SHEET 3 AA6 3 ILE A 622 VAL A 624 1 O ILE A 622 N LEU A 587 SITE 1 AC1 15 ILE A 306 ALA A 384 GLU A 385 ALA A 386 SITE 2 AC1 15 ALA A 412 PHE A 413 GLY A 414 MET A 415 SITE 3 AC1 15 SER A 416 SER A 420 LEU A 465 ASP A 524 SITE 4 AC1 15 LEU A 535 HOH A 802 HOH A 840 SITE 1 AC2 6 TYR A 116 SER A 159 ASN A 160 HIS A 161 SITE 2 AC2 6 ARG A 327 HOH A 830 SITE 1 AC3 4 LYS A 148 ALA A 149 HIS A 248 HOH A 851 SITE 1 AC4 6 HIS A 197 HIS A 198 MET A 267 GLN A 511 SITE 2 AC4 6 GLU A 512 GLN A 515 SITE 1 AC5 3 LYS A 405 GLY A 406 ARG A 430 SITE 1 AC6 1 ARG A 430 SITE 1 AC7 6 SER A 158 ASN A 160 MET A 163 LEU A 303 SITE 2 AC7 6 ARG A 325 THR A 328 SITE 1 AC8 2 ALA A 333 ARG A 337 SITE 1 AC9 2 HIS A 479 ARG A 491 SITE 1 AD1 4 GLU A 385 ALA A 386 LYS A 643 GLN A 647 SITE 1 AD2 4 PHE A 426 LYS A 467 ARG A 532 HOH A 806 SITE 1 AD3 3 ARG A 137 GLU A 242 ARG A 243 SITE 1 AD4 5 ASN A 289 PHE A 291 ASP A 295 THR A 378 SITE 2 AD4 5 ARG A 410 SITE 1 AD5 3 GLU A 447 GLN A 448 HIS A 488 SITE 1 AD6 6 ALA A 358 ASN A 361 THR A 391 ALA A 640 SITE 2 AD6 6 GLN A 641 THR A 644 SITE 1 AD7 4 GLY A 113 LEU A 114 THR A 125 GLU A 322 SITE 1 AD8 4 HIS A 197 LYS A 201 HIS A 205 ALA A 516 SITE 1 AD9 2 ARG A 243 THR A 245 CRYST1 103.274 103.274 172.747 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009683 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005789 0.00000