HEADER RNA BINDING PROTEIN 16-OCT-19 6UP2 TITLE CRYSTAL STRUCTURE OF THE MURINE DHX36 HELICASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DHX36 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DHX36; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSMT3 KEYWDS HELICASE, ATP-DEPENDENT, RNA-BINDING, DNA-BINDING, G4 RESOLVASE, RNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.CHUENCHOR,J.JIANG,T.S.XIAO REVDAT 2 13-MAR-24 6UP2 1 REMARK REVDAT 1 28-OCT-20 6UP2 0 JRNL AUTH W.CHUENCHOR,J.JIANG,T.S.XIAO JRNL TITL CRYSTAL STRUCTURE OF THE MURINE DHX36 HELICASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 59264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3900 - 5.4321 0.97 2730 141 0.1532 0.1879 REMARK 3 2 5.4321 - 4.3127 0.99 2711 164 0.1344 0.1662 REMARK 3 3 4.3127 - 3.7679 0.99 2712 140 0.1421 0.2004 REMARK 3 4 3.7679 - 3.4235 0.99 2702 137 0.1611 0.2180 REMARK 3 5 3.4235 - 3.1782 0.99 2708 157 0.1828 0.2302 REMARK 3 6 3.1782 - 2.9908 0.99 2721 135 0.1948 0.2349 REMARK 3 7 2.9908 - 2.8411 1.00 2692 148 0.1925 0.2539 REMARK 3 8 2.8411 - 2.7174 1.00 2733 130 0.1902 0.2259 REMARK 3 9 2.7174 - 2.6128 0.99 2664 144 0.1967 0.2377 REMARK 3 10 2.6128 - 2.5227 1.00 2711 147 0.1901 0.2346 REMARK 3 11 2.5227 - 2.4438 1.00 2714 142 0.1969 0.2698 REMARK 3 12 2.4438 - 2.3739 1.00 2693 158 0.2109 0.2824 REMARK 3 13 2.3739 - 2.3115 1.00 2723 130 0.2142 0.2791 REMARK 3 14 2.3115 - 2.2551 0.99 2645 147 0.2371 0.3067 REMARK 3 15 2.2551 - 2.2038 0.98 2713 142 0.2372 0.3111 REMARK 3 16 2.2038 - 2.1569 1.00 2689 115 0.2420 0.2977 REMARK 3 17 2.1569 - 2.1138 1.00 2680 132 0.2507 0.3222 REMARK 3 18 2.1138 - 2.0739 0.97 2643 150 0.2711 0.3692 REMARK 3 19 2.0739 - 2.0368 0.95 2552 134 0.2901 0.3352 REMARK 3 20 2.0368 - 2.0023 0.98 2650 159 0.3067 0.3574 REMARK 3 21 2.0023 - 1.9700 0.92 2478 148 0.3753 0.4222 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6633 REMARK 3 ANGLE : 1.285 8966 REMARK 3 CHIRALITY : 0.052 1019 REMARK 3 PLANARITY : 0.008 1141 REMARK 3 DIHEDRAL : 15.008 2529 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 158:378) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5520 18.5742 -44.0998 REMARK 3 T TENSOR REMARK 3 T11: 0.2915 T22: 0.3701 REMARK 3 T33: 0.3026 T12: -0.0008 REMARK 3 T13: -0.0211 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 0.8984 L22: 0.6693 REMARK 3 L33: 1.0461 L12: 0.7433 REMARK 3 L13: -0.1756 L23: 0.5532 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.1630 S13: 0.0756 REMARK 3 S21: -0.0492 S22: 0.0222 S23: 0.0515 REMARK 3 S31: 0.0095 S32: -0.0517 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 379:519) REMARK 3 ORIGIN FOR THE GROUP (A): -34.3123 33.4095 -35.6495 REMARK 3 T TENSOR REMARK 3 T11: 0.2455 T22: 0.3570 REMARK 3 T33: 0.3379 T12: -0.0132 REMARK 3 T13: -0.0041 T23: 0.0764 REMARK 3 L TENSOR REMARK 3 L11: 0.9472 L22: 1.2050 REMARK 3 L33: 0.9969 L12: -0.3243 REMARK 3 L13: 0.0163 L23: 0.0500 REMARK 3 S TENSOR REMARK 3 S11: -0.0683 S12: 0.0953 S13: -0.0681 REMARK 3 S21: 0.1554 S22: 0.0449 S23: 0.1563 REMARK 3 S31: 0.0469 S32: -0.1191 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 520:789) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8831 14.5879 -25.9007 REMARK 3 T TENSOR REMARK 3 T11: 0.2562 T22: 0.2723 REMARK 3 T33: 0.2455 T12: -0.0103 REMARK 3 T13: 0.0020 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.3662 L22: 0.4833 REMARK 3 L33: 0.2773 L12: -0.0714 REMARK 3 L13: 0.0207 L23: -0.2626 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.1295 S13: -0.0086 REMARK 3 S21: -0.0612 S22: -0.0225 S23: -0.0294 REMARK 3 S31: 0.0522 S32: 0.0130 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 790:981) REMARK 3 ORIGIN FOR THE GROUP (A): -23.5729 -1.9920 -8.0625 REMARK 3 T TENSOR REMARK 3 T11: 0.3207 T22: 0.2082 REMARK 3 T33: 0.2438 T12: -0.0001 REMARK 3 T13: 0.0191 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.9052 L22: 1.4950 REMARK 3 L33: 0.8321 L12: 0.0872 REMARK 3 L13: 0.1389 L23: -0.3528 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: 0.0191 S13: -0.0837 REMARK 3 S21: 0.1751 S22: -0.0939 S23: 0.0034 REMARK 3 S31: 0.1529 S32: -0.0862 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UP2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59446 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 45.392 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG3350, 200 MM PROLINE, 100 MM REMARK 280 HEPES, PH 7.5, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.84550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 152 REMARK 465 SER A 153 REMARK 465 TYR A 154 REMARK 465 ILE A 155 REMARK 465 ASP A 156 REMARK 465 ARG A 157 REMARK 465 GLU A 405 REMARK 465 HIS A 406 REMARK 465 ARG A 407 REMARK 465 SER A 408 REMARK 465 GLN A 409 REMARK 465 PHE A 410 REMARK 465 LYS A 411 REMARK 465 ARG A 412 REMARK 465 GLY A 413 REMARK 465 PHE A 414 REMARK 465 MET A 415 REMARK 465 GLN A 416 REMARK 465 GLY A 417 REMARK 465 HIS A 418 REMARK 465 VAL A 419 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 395 NH1 ARG A 398 1.97 REMARK 500 NZ LYS A 427 OD1 ASP A 616 2.11 REMARK 500 ND2 ASN A 420 OE2 GLU A 581 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 249 CB CYS A 249 SG -0.112 REMARK 500 CYS A 706 CB CYS A 706 SG -0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 533 C - N - CA ANGL. DEV. = -10.2 DEGREES REMARK 500 PRO A 534 C - N - CA ANGL. DEV. = -14.4 DEGREES REMARK 500 PRO A 534 C - N - CD ANGL. DEV. = 14.3 DEGREES REMARK 500 LEU A 842 CB - CG - CD1 ANGL. DEV. = -12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 421 -155.76 -165.29 REMARK 500 GLN A 422 -38.67 -37.00 REMARK 500 THR A 522 -71.92 -53.05 REMARK 500 PRO A 534 47.45 -80.22 REMARK 500 VAL A 598 -61.40 -104.55 REMARK 500 PHE A 719 -81.40 -102.90 REMARK 500 LYS A 742 -132.41 52.83 REMARK 500 PRO A 833 40.38 -90.29 REMARK 500 THR A 886 -84.26 -113.34 REMARK 500 LYS A 913 -61.52 -128.24 REMARK 500 ASP A 914 73.96 59.79 REMARK 500 LYS A 915 -117.07 57.98 REMARK 500 GLU A 924 -25.20 71.32 REMARK 500 SER A 930 139.59 -175.37 REMARK 500 LYS A 965 -9.05 84.24 REMARK 500 ARG A 967 -22.24 74.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 523 ASN A 524 149.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 CYS A 706 10.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1002 DBREF 6UP2 A 152 981 UNP B2RQS6 B2RQS6_MOUSE 152 981 SEQRES 1 A 830 LYS SER TYR ILE ASP ARG ASP THR GLU TYR LEU LEU GLN SEQRES 2 A 830 GLU ASN GLU PRO ASN LEU SER LEU ASP GLN HIS LEU LEU SEQRES 3 A 830 GLU ASP LEU GLN ARG LYS LYS THR ASP PRO ARG TYR ILE SEQRES 4 A 830 GLU MET GLN ARG PHE ARG LYS LYS LEU PRO SER TYR GLY SEQRES 5 A 830 MET GLN LYS GLU LEU VAL ASN LEU ILE ASN ASN HIS GLN SEQRES 6 A 830 VAL THR VAL ILE SER GLY GLU THR GLY CYS GLY LYS THR SEQRES 7 A 830 THR GLN VAL THR GLN PHE ILE LEU ASP ASN TYR ILE GLU SEQRES 8 A 830 ARG GLY LYS GLY SER ALA CYS ARG ILE VAL CYS THR GLN SEQRES 9 A 830 PRO ARG ARG ILE SER ALA ILE SER VAL ALA GLU ARG VAL SEQRES 10 A 830 ALA THR GLU ARG ALA GLU SER CYS GLY ASN GLY ASN SER SEQRES 11 A 830 THR GLY TYR GLN ILE ARG LEU GLN SER ARG LEU PRO ARG SEQRES 12 A 830 LYS GLN GLY SER ILE LEU TYR CYS THR THR GLY ILE ILE SEQRES 13 A 830 LEU GLN TRP LEU GLN SER ASP SER ARG LEU SER SER VAL SEQRES 14 A 830 SER HIS ILE VAL LEU ASP GLU ILE HIS GLU ARG ASN LEU SEQRES 15 A 830 GLN SER ASP VAL LEU MET THR VAL ILE LYS ASP LEU LEU SEQRES 16 A 830 HIS PHE ARG SER ASP LEU LYS VAL ILE LEU MET SER ALA SEQRES 17 A 830 THR LEU ASN ALA GLU LYS PHE SER GLU TYR PHE GLY ASN SEQRES 18 A 830 CYS PRO MET ILE HIS ILE PRO GLY PHE THR PHE PRO VAL SEQRES 19 A 830 VAL GLU TYR LEU LEU GLU ASP ILE ILE GLU LYS ILE ARG SEQRES 20 A 830 TYR VAL PRO ASP GLN LYS GLU HIS ARG SER GLN PHE LYS SEQRES 21 A 830 ARG GLY PHE MET GLN GLY HIS VAL ASN ARG GLN GLU LYS SEQRES 22 A 830 GLU GLU LYS GLU ALA ILE TYR LYS GLU ARG TRP PRO ALA SEQRES 23 A 830 TYR ILE LYS GLU LEU ARG THR ARG TYR SER ALA SER THR SEQRES 24 A 830 VAL ASP VAL LEU GLN MET MET ASP ASP ASP LYS VAL ASP SEQRES 25 A 830 LEU ASN LEU ILE ALA ALA LEU ILE ARG TYR ILE VAL LEU SEQRES 26 A 830 GLU GLU GLU ASP GLY ALA ILE LEU VAL PHE LEU PRO GLY SEQRES 27 A 830 TRP ASP ASN ILE SER THR LEU HIS ASP LEU LEU MET SER SEQRES 28 A 830 GLN VAL MET PHE LYS SER ASP LYS PHE LEU ILE ILE PRO SEQRES 29 A 830 LEU HIS SER LEU MET PRO THR VAL ASN GLN THR GLN VAL SEQRES 30 A 830 PHE LYS LYS THR PRO PRO GLY VAL ARG LYS ILE VAL ILE SEQRES 31 A 830 ALA THR ASN ILE ALA GLU THR SER ILE THR ILE ASP ASP SEQRES 32 A 830 VAL VAL TYR VAL ILE ASP GLY GLY LYS ILE LYS GLU THR SEQRES 33 A 830 HIS PHE ASP THR GLN ASN ASN ILE SER THR MET SER ALA SEQRES 34 A 830 GLU TRP VAL SER LYS ALA ASN ALA LYS GLN ARG LYS GLY SEQRES 35 A 830 ARG ALA GLY ARG VAL GLN PRO GLY HIS CYS TYR HIS LEU SEQRES 36 A 830 TYR ASN GLY LEU ARG ALA SER LEU LEU ASP ASP TYR GLN SEQRES 37 A 830 LEU PRO GLU ILE LEU ARG THR PRO LEU GLU GLU LEU CYS SEQRES 38 A 830 LEU GLN ILE LYS ILE LEU ARG LEU GLY GLY ILE ALA TYR SEQRES 39 A 830 PHE LEU SER ARG LEU MET ASP PRO PRO SER ASN GLU ALA SEQRES 40 A 830 VAL VAL LEU SER ILE LYS HIS LEU MET GLU LEU SER ALA SEQRES 41 A 830 LEU ASP LYS GLN GLU GLU LEU THR PRO LEU GLY VAL HIS SEQRES 42 A 830 LEU ALA ARG LEU PRO VAL GLU PRO HIS ILE GLY LYS MET SEQRES 43 A 830 ILE LEU PHE GLY ALA LEU PHE CYS CYS LEU ASP PRO VAL SEQRES 44 A 830 LEU THR ILE ALA ALA SER LEU SER PHE LYS ASP PRO PHE SEQRES 45 A 830 VAL ILE PRO LEU GLY LYS GLU LYS ILE ALA ASP ALA ARG SEQRES 46 A 830 ARG LYS GLU LEU ALA LYS GLU THR ARG SER ASP HIS LEU SEQRES 47 A 830 THR VAL VAL ASN ALA PHE GLU GLY TRP GLU GLU ALA LYS SEQRES 48 A 830 ARG ARG GLY PHE ARG TYR GLU LYS ASP TYR CYS TRP GLU SEQRES 49 A 830 TYR PHE LEU SER SER ASN THR LEU GLN MET LEU HIS ASN SEQRES 50 A 830 MET LYS GLY GLN PHE ALA GLU HIS LEU LEU GLY ALA GLY SEQRES 51 A 830 PHE VAL SER SER ARG SER PRO LYS ASP PRO LYS ALA ASN SEQRES 52 A 830 ILE ASN SER ASP ASN GLU LYS ILE ILE LYS ALA VAL ILE SEQRES 53 A 830 CYS ALA GLY LEU TYR PRO LYS VAL ALA LYS ILE ARG LEU SEQRES 54 A 830 ASN LEU GLY LYS LYS ARG LYS MET VAL LYS VAL HIS THR SEQRES 55 A 830 LYS SER ASP GLY LEU VAL SER ILE HIS PRO LYS SER VAL SEQRES 56 A 830 ASN VAL GLU GLN THR ASP PHE HIS TYR ASN TRP LEU ILE SEQRES 57 A 830 TYR HIS LEU LYS MET ARG THR SER SER ILE TYR LEU TYR SEQRES 58 A 830 ASP CYS THR GLU VAL SER PRO TYR CYS LEU LEU PHE PHE SEQRES 59 A 830 GLY GLY ASP ILE SER ILE GLN LYS ASP LYS ASP GLN GLU SEQRES 60 A 830 ILE ILE ALA VAL ASP GLU TRP ILE VAL PHE GLN SER PRO SEQRES 61 A 830 GLU ARG ILE ALA HIS LEU VAL LYS GLY LEU ARG LYS GLU SEQRES 62 A 830 LEU ASP SER LEU LEU GLN GLU LYS ILE GLU SER PRO HIS SEQRES 63 A 830 PRO VAL ASP TRP ASP ASP THR LYS SER ARG ASP CYS ALA SEQRES 64 A 830 VAL LEU SER ALA ILE LEU ASP LEU ILE LYS THR HET GOL A1001 6 HET CL A1002 1 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 CL CL 1- FORMUL 4 HOH *272(H2 O) HELIX 1 AA1 THR A 159 GLN A 164 1 6 HELIX 2 AA2 ASN A 169 THR A 185 1 17 HELIX 3 AA3 ASP A 186 LYS A 198 1 13 HELIX 4 AA4 LEU A 199 MET A 204 1 6 HELIX 5 AA5 MET A 204 HIS A 215 1 12 HELIX 6 AA6 GLY A 227 ARG A 243 1 17 HELIX 7 AA7 LYS A 245 ALA A 248 5 4 HELIX 8 AA8 ARG A 257 ARG A 272 1 16 HELIX 9 AA9 THR A 304 ASP A 314 1 11 HELIX 10 AB1 GLU A 327 ARG A 331 5 5 HELIX 11 AB2 ASN A 332 ARG A 349 1 18 HELIX 12 AB3 ALA A 363 PHE A 370 1 8 HELIX 13 AB4 LEU A 389 ARG A 398 1 10 HELIX 14 AB5 ARG A 421 TYR A 446 1 26 HELIX 15 AB6 SER A 447 MET A 457 1 11 HELIX 16 AB7 ASP A 463 GLU A 478 1 16 HELIX 17 AB8 GLY A 489 SER A 502 1 14 HELIX 18 AB9 GLN A 503 SER A 508 5 6 HELIX 19 AC1 ASN A 544 THR A 548 5 5 HELIX 20 AC2 SER A 584 ARG A 594 1 11 HELIX 21 AC3 ASN A 608 LEU A 614 1 7 HELIX 22 AC4 PRO A 621 THR A 626 1 6 HELIX 23 AC5 LEU A 628 LEU A 638 1 11 HELIX 24 AC6 GLY A 642 ARG A 649 1 8 HELIX 25 AC7 SER A 655 LEU A 669 1 15 HELIX 26 AC8 THR A 679 ARG A 687 1 9 HELIX 27 AC9 GLU A 691 PHE A 704 1 14 HELIX 28 AD1 CYS A 706 PHE A 719 1 14 HELIX 29 AD2 LYS A 729 LYS A 742 1 14 HELIX 30 AD3 SER A 746 ARG A 764 1 19 HELIX 31 AD4 GLY A 765 PHE A 777 1 13 HELIX 32 AD5 SER A 779 ALA A 800 1 22 HELIX 33 AD6 ASP A 810 ASN A 814 5 5 HELIX 34 AD7 ASN A 819 TYR A 832 1 14 HELIX 35 AD8 SER A 898 GLY A 906 1 9 HELIX 36 AD9 PRO A 931 SER A 955 1 25 HELIX 37 AE1 ARG A 967 LYS A 980 1 14 SHEET 1 AA1 8 GLN A 289 ARG A 291 0 SHEET 2 AA1 8 THR A 282 ILE A 286 -1 N ILE A 286 O GLN A 289 SHEET 3 AA1 8 SER A 298 THR A 303 1 O TYR A 301 N GLN A 285 SHEET 4 AA1 8 ARG A 250 GLN A 255 1 N ILE A 251 O LEU A 300 SHEET 5 AA1 8 HIS A 322 LEU A 325 1 O VAL A 324 N VAL A 252 SHEET 6 AA1 8 LYS A 353 SER A 358 1 O LYS A 353 N ILE A 323 SHEET 7 AA1 8 VAL A 217 GLY A 222 1 N ILE A 220 O LEU A 356 SHEET 8 AA1 8 MET A 375 ILE A 378 1 O ILE A 378 N SER A 221 SHEET 1 AA2 6 VAL A 385 TYR A 388 0 SHEET 2 AA2 6 GLY A 601 HIS A 605 1 O CYS A 603 N VAL A 386 SHEET 3 AA2 6 VAL A 555 ASP A 560 1 N ASP A 560 O TYR A 604 SHEET 4 AA2 6 ALA A 482 PHE A 486 1 N LEU A 484 O ILE A 559 SHEET 5 AA2 6 ARG A 537 ALA A 542 1 O VAL A 540 N VAL A 485 SHEET 6 AA2 6 PHE A 511 LEU A 516 1 N LEU A 512 O ILE A 539 SHEET 1 AA3 2 LYS A 563 ASP A 570 0 SHEET 2 AA3 2 ILE A 575 TRP A 582 -1 O GLU A 581 N ILE A 564 SHEET 1 AA4 7 LYS A 883 ARG A 885 0 SHEET 2 AA4 7 ILE A 889 LEU A 891 -1 O TYR A 890 N MET A 884 SHEET 3 AA4 7 GLY A 857 ILE A 861 1 N SER A 860 O LEU A 891 SHEET 4 AA4 7 LYS A 850 THR A 853 -1 N VAL A 851 O VAL A 859 SHEET 5 AA4 7 VAL A 835 ILE A 838 -1 N LYS A 837 O HIS A 852 SHEET 6 AA4 7 TRP A 877 TYR A 880 -1 O LEU A 878 N ALA A 836 SHEET 7 AA4 7 CYS A 894 VAL A 897 -1 O THR A 895 N ILE A 879 SHEET 1 AA5 3 ILE A 909 GLN A 912 0 SHEET 2 AA5 3 ILE A 919 VAL A 922 -1 O ALA A 921 N SER A 910 SHEET 3 AA5 3 ILE A 926 GLN A 929 -1 O PHE A 928 N ILE A 920 CISPEP 1 TYR A 832 PRO A 833 0 1.49 SITE 1 AC1 9 ARG A 639 LEU A 640 LYS A 729 ARG A 736 SITE 2 AC1 9 TRP A 774 GLU A 775 PHE A 777 CL A1002 SITE 3 AC1 9 HOH A1209 SITE 1 AC2 3 ARG A 736 GLU A 775 GOL A1001 CRYST1 61.246 67.691 103.683 90.00 92.49 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016328 0.000000 0.000711 0.00000 SCALE2 0.000000 0.014773 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009654 0.00000