HEADER VIRAL PROTEIN/IMMUNE SYSTEM 29-OCT-19 6UTK TITLE CRYSTAL STRUCTURE OF 438-B11 FAB IN COMPLEX WITH AN UNCLEAVED TITLE 2 PREFUSION OPTIMIZED (UFO) SOLUBLE BG505 TRIMER AND FAB 35O22 AT 3.80 TITLE 3 ANGSTROM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 35O22 FAB HEAVY CHAIN; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 35O22 FAB LIGHT CHAIN; COMPND 7 CHAIN: E; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: B11 FAB LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: ENVELOPE GLYCOPROTEIN GP120; COMPND 15 CHAIN: G; COMPND 16 FRAGMENT: UNP RESIDUES 30-503; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: ENVELOPE GLYCOPROTEIN GP41; COMPND 20 CHAIN: T; COMPND 21 FRAGMENT: UNP RESIDUES 511-546, LINKER, UNP RESIDUES 568-663; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 6; COMPND 24 MOLECULE: B11 FAB HEAVY CHAIN; COMPND 25 CHAIN: H; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 24 ORGANISM_COMMON: HIV-1; SOURCE 25 ORGANISM_TAXID: 11676; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 31 ORGANISM_COMMON: HIV-1; SOURCE 32 ORGANISM_TAXID: 11676; SOURCE 33 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 34 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 36 MOL_ID: 6; SOURCE 37 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 38 ORGANISM_COMMON: HUMAN; SOURCE 39 ORGANISM_TAXID: 9606; SOURCE 40 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 41 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 42 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV-1 GP160, GLYCAN SUPERSITE, HUMAN ANTIBODY, IMMUNE SYSTEM, VIRAL- KEYWDS 2 PROTEIN COMPLEX, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.KUMAR,I.A.WILSON REVDAT 3 11-OCT-23 6UTK 1 REMARK REVDAT 2 07-OCT-20 6UTK 1 REMARK LINK ATOM REVDAT 1 23-SEP-20 6UTK 0 JRNL AUTH S.KUMAR,B.JU,B.SHAPIRO,X.LIN,L.REN,L.ZHANG,D.LI,Z.ZHOU, JRNL AUTH 2 Y.FENG,C.SOU,C.J.MANN,Y.HAO,A.SARKAR,J.JOU,C.NUNNALLY, JRNL AUTH 3 K.HONG,S.WANG,X.GE,B.SU,E.LANDAIS,D.SOK,M.B.ZWICK,L.HE, JRNL AUTH 4 J.ZHU,I.A.WILSON,Z.SHAO JRNL TITL A VH1-69 ANTIBODY LINEAGE FROM AN INFECTED CHINESE DONOR JRNL TITL 2 POTENTLY NEUTRALIZES HIV-1 BY TARGETING THE V3 GLYCAN JRNL TITL 3 SUPERSITE JRNL REF SCI ADV V. 6 B1328 2020 JRNL REFN ESSN 2375-2548 JRNL DOI 10.1126/SCIADV.ABB1328 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 29787 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.300 REMARK 3 R VALUE (WORKING SET) : 0.299 REMARK 3 FREE R VALUE : 0.317 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4400 - 8.4400 1.00 2688 143 0.2592 0.3038 REMARK 3 2 8.4400 - 6.7000 1.00 2599 137 0.3062 0.3394 REMARK 3 3 6.7000 - 5.8600 1.00 2596 137 0.3136 0.3216 REMARK 3 4 5.8600 - 5.3200 1.00 2580 135 0.3143 0.3117 REMARK 3 5 5.3200 - 4.9400 1.00 2586 136 0.2979 0.3041 REMARK 3 6 4.9400 - 4.6500 1.00 2547 135 0.2853 0.3209 REMARK 3 7 4.6500 - 4.4200 1.00 2585 135 0.2912 0.3205 REMARK 3 8 4.4200 - 4.2300 1.00 2562 136 0.3180 0.2801 REMARK 3 9 4.2300 - 4.0600 1.00 2536 133 0.3273 0.2925 REMARK 3 10 4.0600 - 3.9200 0.99 2557 134 0.3515 0.4005 REMARK 3 11 3.9200 - 3.8000 0.96 2460 130 0.3790 0.3475 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.632 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.427 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 131.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 166.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 12688 REMARK 3 ANGLE : 0.775 17266 REMARK 3 CHIRALITY : 0.056 2128 REMARK 3 PLANARITY : 0.010 2100 REMARK 3 DIHEDRAL : 13.369 4901 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 31.5891 114.5649 113.9110 REMARK 3 T TENSOR REMARK 3 T11: 1.0489 T22: 1.0748 REMARK 3 T33: 0.9932 T12: 0.2704 REMARK 3 T13: 0.0938 T23: 0.1698 REMARK 3 L TENSOR REMARK 3 L11: -0.0715 L22: 0.1618 REMARK 3 L33: 1.2671 L12: 0.0559 REMARK 3 L13: 0.0270 L23: -0.6144 REMARK 3 S TENSOR REMARK 3 S11: 0.1365 S12: 0.0943 S13: 0.0114 REMARK 3 S21: 0.0483 S22: -0.1677 S23: 0.0894 REMARK 3 S31: 0.2190 S32: 0.3552 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UTK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000245186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V0.95 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK 1.16_3549 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29804 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.17000 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.19000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5CEZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 36% V/V PEG400, REMARK 280 0.1 M SODIUM/POTASSIUM PHOSPHATE, PH 5.7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 123.65400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.39167 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 85.87067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 123.65400 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 71.39167 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 85.87067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 123.65400 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 71.39167 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 85.87067 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 123.65400 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 71.39167 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 85.87067 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 123.65400 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 71.39167 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 85.87067 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 123.65400 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 71.39167 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 85.87067 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 142.78334 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 171.74133 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 142.78334 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 171.74133 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 142.78334 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 171.74133 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 142.78334 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 171.74133 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 142.78334 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 171.74133 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 142.78334 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 171.74133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTADECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, L, G, T, H, A, B, C, F, REMARK 350 AND CHAINS: I, J, K, M, N, O, P, Q, R, REMARK 350 AND CHAINS: S, U, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, L, G, T, H, A, B, C, F, REMARK 350 AND CHAINS: I, J, K, M, N, O, P, Q, R, REMARK 350 AND CHAINS: S, U, V REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 123.65400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 214.17501 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, L, G, T, H, A, B, C, F, REMARK 350 AND CHAINS: I, J, K, M, N, O, P, Q, R, REMARK 350 AND CHAINS: S, U, V REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -123.65400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 214.17501 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU D 223 REMARK 465 PHE D 224 REMARK 465 GLN D 225 REMARK 465 GLN E 1 REMARK 465 CYS E 211 REMARK 465 SER E 212 REMARK 465 ALA G 31 REMARK 465 GLU G 32 REMARK 465 GLU G 185A REMARK 465 ASN G 185B REMARK 465 GLN G 185C REMARK 465 GLY G 185D REMARK 465 ASN G 185E REMARK 465 ARG G 185F REMARK 465 SER G 185G REMARK 465 ASN G 185H REMARK 465 ASN G 185I REMARK 465 SER G 185J REMARK 465 GLN G 403 REMARK 465 GLY G 404 REMARK 465 SER G 405 REMARK 465 ASN G 406 REMARK 465 SER G 407 REMARK 465 THR G 408 REMARK 465 GLY G 409 REMARK 465 VAL G 505 REMARK 465 VAL G 506 REMARK 465 GLY G 507 REMARK 465 GLY G 508 REMARK 465 GLY G 509 REMARK 465 GLY G 510 REMARK 465 GLY G 511 REMARK 465 SER G 512 REMARK 465 GLY G 513 REMARK 465 GLY G 514 REMARK 465 GLY G 515 REMARK 465 GLY G 516 REMARK 465 SER G 517 REMARK 465 ALA T 512 REMARK 465 VAL T 513 REMARK 465 GLY T 514 REMARK 465 ILE T 515 REMARK 465 GLY T 516 REMARK 465 ALA T 517 REMARK 465 UNK H 130 REMARK 465 UNK H 131 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA D 16 -159.00 -90.47 REMARK 500 CYS D 22 82.06 -154.45 REMARK 500 ASP D 86 42.99 -106.55 REMARK 500 LEU D 96 -73.12 -74.20 REMARK 500 ASP D 144 75.53 58.48 REMARK 500 PRO D 147 -161.19 -72.72 REMARK 500 PRO D 149 -177.93 -68.87 REMARK 500 CYS D 216 -2.22 -140.13 REMARK 500 GLN E 6 -168.57 -115.64 REMARK 500 ALA E 8 -79.23 -66.66 REMARK 500 CYS E 23 106.31 -167.92 REMARK 500 GLU E 50 -24.81 64.30 REMARK 500 ASP E 51 -154.29 -172.49 REMARK 500 ASP E 77 73.94 54.52 REMARK 500 THR E 92 -166.22 -117.35 REMARK 500 LEU E 106A -164.90 -100.74 REMARK 500 ALA E 143 119.82 -161.07 REMARK 500 SER E 187 32.79 -91.35 REMARK 500 SER L 52 -28.42 -148.66 REMARK 500 ALA L 55 -169.35 -72.57 REMARK 500 PRO L 80 0.45 -66.88 REMARK 500 ARG L 142 172.12 -59.21 REMARK 500 GLU L 143 65.50 71.12 REMARK 500 ASN L 158 31.02 -93.25 REMARK 500 LYS L 190 -18.60 -141.20 REMARK 500 ASP G 57 -8.13 76.55 REMARK 500 ALA G 58 -18.57 82.68 REMARK 500 HIS G 66 -47.58 65.83 REMARK 500 VAL G 68 -154.94 -96.45 REMARK 500 CYS G 126 71.18 -69.97 REMARK 500 ILE G 138 125.89 -39.85 REMARK 500 THR G 139 82.62 53.73 REMARK 500 ASN G 156 80.49 -68.40 REMARK 500 THR G 163 -169.89 -124.15 REMARK 500 VAL G 172 -166.11 -120.31 REMARK 500 SER G 174 46.68 80.66 REMARK 500 PHE G 176 177.13 73.52 REMARK 500 TYR G 177 158.99 88.10 REMARK 500 GLN G 183 -177.02 98.91 REMARK 500 THR G 198 -62.11 -126.29 REMARK 500 GLN G 246 -61.43 -97.28 REMARK 500 GLN G 258 -27.72 65.33 REMARK 500 GLU G 268 -26.29 71.97 REMARK 500 ASN G 301 86.79 -60.54 REMARK 500 CYS G 378 119.49 -165.49 REMARK 500 PHE G 391 71.16 -116.99 REMARK 500 ASN G 411 92.34 56.27 REMARK 500 PHE T 519 -70.80 -81.45 REMARK 500 ALA T 525 41.76 -108.64 REMARK 500 THR T 536 45.66 -141.75 REMARK 500 REMARK 500 THIS ENTRY HAS 66 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG U 1 DBREF 6UTK D 1 225 PDB 6UTK 6UTK 1 225 DBREF 6UTK E 1 212 PDB 6UTK 6UTK 1 212 DBREF 6UTK L 1 212 PDB 6UTK 6UTK 1 212 DBREF 6UTK G 31 506 UNP Q2N0S6 Q2N0S6_9HIV1 30 503 DBREF 6UTK T 512 547 UNP Q2N0S9 Q2N0S9_9HIV1 511 546 DBREF 6UTK T 569 664 UNP Q2N0S9 Q2N0S9_9HIV1 568 663 DBREF 6UTK H 1 216 PDB 6UTK 6UTK 1 216 SEQADV 6UTK ASP G 62 UNP Q2N0S6 GLU 61 CONFLICT SEQADV 6UTK ASN G 332 UNP Q2N0S6 THR 330 CONFLICT SEQADV 6UTK CYS G 501 UNP Q2N0S6 ALA 498 CONFLICT SEQADV 6UTK GLY G 507 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 508 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 509 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 510 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 511 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK SER G 512 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 513 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 514 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 515 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK GLY G 516 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK SER G 517 UNP Q2N0S6 EXPRESSION TAG SEQADV 6UTK ASN T 547A UNP Q2N0S9 LINKER SEQADV 6UTK PRO T 547B UNP Q2N0S9 LINKER SEQADV 6UTK ASP T 547C UNP Q2N0S9 LINKER SEQADV 6UTK TRP T 547D UNP Q2N0S9 LINKER SEQADV 6UTK LEU T 547E UNP Q2N0S9 LINKER SEQADV 6UTK PRO T 547F UNP Q2N0S9 LINKER SEQADV 6UTK ASP T 547G UNP Q2N0S9 LINKER SEQADV 6UTK MET T 547H UNP Q2N0S9 LINKER SEQADV 6UTK CYS T 605 UNP Q2N0S9 THR 604 CONFLICT SEQRES 1 D 243 GLU GLY GLN LEU VAL GLN SER GLY ALA GLU LEU LYS LYS SEQRES 2 D 243 PRO GLY ALA SER VAL LYS ILE SER CYS LYS THR SER GLY SEQRES 3 D 243 TYR ARG PHE ASN PHE TYR HIS ILE ASN TRP ILE ARG GLN SEQRES 4 D 243 THR ALA GLY ARG GLY PRO GLU TRP MET GLY TRP ILE SER SEQRES 5 D 243 PRO TYR SER GLY ASP LYS ASN LEU ALA PRO ALA PHE GLN SEQRES 6 D 243 ASP ARG VAL ILE MET THR THR ASP THR GLU VAL PRO VAL SEQRES 7 D 243 THR SER PHE THR SER THR GLY ALA ALA TYR MET GLU ILE SEQRES 8 D 243 ARG ASN LEU LYS PHE ASP ASP THR GLY THR TYR PHE CYS SEQRES 9 D 243 ALA LYS GLY LEU LEU ARG ASP GLY SER SER THR TRP LEU SEQRES 10 D 243 PRO TYR LEU TRP GLY GLN GLY THR LEU LEU THR VAL SER SEQRES 11 D 243 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 D 243 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 D 243 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 D 243 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 D 243 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 D 243 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 D 243 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 D 243 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 19 D 243 ASP LYS GLY LEU GLU VAL LEU PHE GLN SEQRES 1 E 216 GLN SER VAL LEU THR GLN SER ALA SER VAL SER GLY SER SEQRES 2 E 216 LEU GLY GLN SER VAL THR ILE SER CYS THR GLY PRO ASN SEQRES 3 E 216 SER VAL CYS CYS SER HIS LYS SER ILE SER TRP TYR GLN SEQRES 4 E 216 TRP PRO PRO GLY ARG ALA PRO THR LEU ILE ILE TYR GLU SEQRES 5 E 216 ASP ASN GLU ARG ALA PRO GLY ILE SER PRO ARG PHE SER SEQRES 6 E 216 GLY TYR LYS SER TYR TRP SER ALA TYR LEU THR ILE SER SEQRES 7 E 216 ASP LEU ARG PRO GLU ASP GLU THR THR TYR TYR CYS CYS SEQRES 8 E 216 SER TYR THR HIS ASN SER GLY CYS VAL PHE GLY THR GLY SEQRES 9 E 216 THR LYS VAL SER VAL LEU GLY GLN SER LYS ALA ASN PRO SEQRES 10 E 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 E 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 E 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 E 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 E 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 E 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 E 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 E 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 L 213 GLU ILE VAL LEU THR GLN SER PRO VAL THR LEU SER LEU SEQRES 2 L 213 SER SER GLY GLU THR GLY THR LEU SER CYS ARG ALA SER SEQRES 3 L 213 GLN ASN ILE SER SER SER TRP ILE ALA TRP TYR GLN GLN SEQRES 4 L 213 ARG ARG GLY GLN VAL PRO ARG LEU LEU ILE SER ALA ALA SEQRES 5 L 213 SER ALA ARG ALA ALA GLY ILE PRO ASP ARG PHE THR GLY SEQRES 6 L 213 ARG GLY SER GLY THR ASP PHE THR LEU THR ILE THR ARG SEQRES 7 L 213 LEU GLU PRO GLU ASP PHE GLY VAL TYR SER CYS GLN TYR SEQRES 8 L 213 TYR GLY GLY SER PHE PHE THR PHE GLY PRO GLY THR GLN SEQRES 9 L 213 VAL ASP VAL LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 213 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 213 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 213 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 213 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 213 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 213 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 213 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 213 SER PHE ASN ARG GLY SEQRES 1 G 485 ALA GLU ASN LEU TRP VAL THR VAL TYR TYR GLY VAL PRO SEQRES 2 G 485 VAL TRP LYS ASP ALA GLU THR THR LEU PHE CYS ALA SER SEQRES 3 G 485 ASP ALA LYS ALA TYR ASP THR GLU LYS HIS ASN VAL TRP SEQRES 4 G 485 ALA THR HIS ALA CYS VAL PRO THR ASP PRO ASN PRO GLN SEQRES 5 G 485 GLU ILE HIS LEU GLU ASN VAL THR GLU GLU PHE ASN MET SEQRES 6 G 485 TRP LYS ASN ASN MET VAL GLU GLN MET HIS THR ASP ILE SEQRES 7 G 485 ILE SER LEU TRP ASP GLN SER LEU LYS PRO CYS VAL LYS SEQRES 8 G 485 LEU THR PRO LEU CYS VAL THR LEU GLN CYS THR ASN VAL SEQRES 9 G 485 THR ASN ASN ILE THR ASP ASP MET ARG GLY GLU LEU LYS SEQRES 10 G 485 ASN CYS SER PHE ASN MET THR THR GLU LEU ARG ASP LYS SEQRES 11 G 485 LYS GLN LYS VAL TYR SER LEU PHE TYR ARG LEU ASP VAL SEQRES 12 G 485 VAL GLN ILE ASN GLU ASN GLN GLY ASN ARG SER ASN ASN SEQRES 13 G 485 SER ASN LYS GLU TYR ARG LEU ILE ASN CYS ASN THR SER SEQRES 14 G 485 ALA ILE THR GLN ALA CYS PRO LYS VAL SER PHE GLU PRO SEQRES 15 G 485 ILE PRO ILE HIS TYR CYS ALA PRO ALA GLY PHE ALA ILE SEQRES 16 G 485 LEU LYS CYS LYS ASP LYS LYS PHE ASN GLY THR GLY PRO SEQRES 17 G 485 CYS PRO SER VAL SER THR VAL GLN CYS THR HIS GLY ILE SEQRES 18 G 485 LYS PRO VAL VAL SER THR GLN LEU LEU LEU ASN GLY SER SEQRES 19 G 485 LEU ALA GLU GLU GLU VAL MET ILE ARG SER GLU ASN ILE SEQRES 20 G 485 THR ASN ASN ALA LYS ASN ILE LEU VAL GLN PHE ASN THR SEQRES 21 G 485 PRO VAL GLN ILE ASN CYS THR ARG PRO ASN ASN ASN THR SEQRES 22 G 485 ARG LYS SER ILE ARG ILE GLY PRO GLY GLN ALA PHE TYR SEQRES 23 G 485 ALA THR GLY ASP ILE ILE GLY ASP ILE ARG GLN ALA HIS SEQRES 24 G 485 CYS ASN VAL SER LYS ALA THR TRP ASN GLU THR LEU GLY SEQRES 25 G 485 LYS VAL VAL LYS GLN LEU ARG LYS HIS PHE GLY ASN ASN SEQRES 26 G 485 THR ILE ILE ARG PHE ALA ASN SER SER GLY GLY ASP LEU SEQRES 27 G 485 GLU VAL THR THR HIS SER PHE ASN CYS GLY GLY GLU PHE SEQRES 28 G 485 PHE TYR CYS ASN THR SER GLY LEU PHE ASN SER THR TRP SEQRES 29 G 485 ILE SER ASN THR SER VAL GLN GLY SER ASN SER THR GLY SEQRES 30 G 485 SER ASN ASP SER ILE THR LEU PRO CYS ARG ILE LYS GLN SEQRES 31 G 485 ILE ILE ASN MET TRP GLN ARG ILE GLY GLN ALA MET TYR SEQRES 32 G 485 ALA PRO PRO ILE GLN GLY VAL ILE ARG CYS VAL SER ASN SEQRES 33 G 485 ILE THR GLY LEU ILE LEU THR ARG ASP GLY GLY SER THR SEQRES 34 G 485 ASN SER THR THR GLU THR PHE ARG PRO GLY GLY GLY ASP SEQRES 35 G 485 MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS TYR LYS SEQRES 36 G 485 VAL VAL LYS ILE GLU PRO LEU GLY VAL ALA PRO THR ARG SEQRES 37 G 485 CYS LYS ARG ARG VAL VAL GLY GLY GLY GLY GLY SER GLY SEQRES 38 G 485 GLY GLY GLY SER SEQRES 1 T 140 ALA VAL GLY ILE GLY ALA VAL PHE LEU GLY PHE LEU GLY SEQRES 2 T 140 ALA ALA GLY SER THR MET GLY ALA ALA SER MET THR LEU SEQRES 3 T 140 THR VAL GLN ALA ARG ASN LEU LEU SER GLY ASN PRO ASP SEQRES 4 T 140 TRP LEU PRO ASP MET THR VAL TRP GLY ILE LYS GLN LEU SEQRES 5 T 140 GLN ALA ARG VAL LEU ALA VAL GLU ARG TYR LEU ARG ASP SEQRES 6 T 140 GLN GLN LEU LEU GLY ILE TRP GLY CYS SER GLY LYS LEU SEQRES 7 T 140 ILE CYS CYS THR ASN VAL PRO TRP ASN SER SER TRP SER SEQRES 8 T 140 ASN ARG ASN LEU SER GLU ILE TRP ASP ASN MET THR TRP SEQRES 9 T 140 LEU GLN TRP ASP LYS GLU ILE SER ASN TYR THR GLN ILE SEQRES 10 T 140 ILE TYR GLY LEU LEU GLU GLU SER GLN ASN GLN GLN GLU SEQRES 11 T 140 LYS ASN GLU GLN ASP LEU LEU ALA LEU ASP SEQRES 1 H 233 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL ARG LYS SEQRES 2 H 233 PRO GLY SER SER VAL THR ILE SER CYS LYS PRO VAL GLY SEQRES 3 H 233 GLY THR PHE THR ASN PHE ALA ILE HIS TRP VAL ARG GLN SEQRES 4 H 233 ALA PRO GLY GLN GLY LEU GLU TRP VAL GLY GLY ARG VAL SEQRES 5 H 233 PRO VAL VAL GLY ILE TYR LYS TYR GLY LYS LYS PHE HIS SEQRES 6 H 233 ASP ARG LEU ARG LEU TYR GLU ASP ASP PRO MET LYS THR SEQRES 7 H 233 VAL PHE LEU GLU LEU ARG SER LEU THR SER ASP ASP THR SEQRES 8 H 233 GLY VAL TYR TYR CYS THR ARG TRP ARG GLY CYS GLY MET SEQRES 9 H 233 CYS PRO TYR ASP THR SER SER TYR TYR ASN ASP ALA SER SEQRES 10 H 233 ASP VAL TRP GLY PRO GLY THR LYS VAL ILE VAL SER ALA SEQRES 11 H 233 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 12 H 233 SER SER LYS UNK UNK SER GLY GLY THR ALA ALA LEU GLY SEQRES 13 H 233 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 14 H 233 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 15 H 233 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 16 H 233 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 17 H 233 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 18 H 233 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS HET NAG A 1 14 HET NAG A 2 14 HET BMA A 3 11 HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET MAN B 5 11 HET MAN B 6 11 HET MAN B 7 11 HET MAN B 8 11 HET MAN B 9 11 HET MAN B 10 11 HET NAG C 1 14 HET NAG C 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET MAN K 4 11 HET MAN K 5 11 HET MAN K 6 11 HET MAN K 7 11 HET MAN K 8 11 HET MAN K 9 11 HET MAN K 10 11 HET MAN K 11 11 HET NAG M 1 14 HET NAG M 2 14 HET BMA M 3 11 HET MAN M 4 11 HET NAG N 1 14 HET NAG N 2 14 HET BMA N 3 11 HET MAN N 4 11 HET MAN N 5 11 HET MAN N 6 11 HET NAG O 1 14 HET NAG O 2 14 HET NAG P 1 14 HET NAG P 2 14 HET BMA P 3 11 HET NAG Q 1 14 HET NAG Q 2 14 HET BMA Q 3 11 HET NAG R 1 14 HET NAG R 2 14 HET BMA R 3 11 HET MAN R 4 11 HET MAN R 5 11 HET MAN R 6 11 HET MAN R 7 11 HET NAG S 1 14 HET NAG S 2 14 HET BMA S 3 11 HET MAN S 4 11 HET MAN S 5 11 HET NAG U 1 14 HET NAG U 2 14 HET BMA U 3 11 HET NAG V 1 14 HET NAG V 2 14 HET NAG G 601 14 HET NAG G 602 14 HET NAG G 603 14 HET NAG G 604 14 HET NAG G 605 14 HET NAG T 701 14 HET NAG T 702 14 HET NAG T 703 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 7 NAG 40(C8 H15 N O6) FORMUL 7 BMA 12(C6 H12 O6) FORMUL 8 MAN 26(C6 H12 O6) HELIX 1 AA1 ARG D 28 TYR D 32 5 5 HELIX 2 AA2 PRO D 61 GLN D 64 5 4 HELIX 3 AA3 ASP D 217 VAL D 222 1 6 HELIX 4 AA4 ARG E 79 GLU E 83 5 5 HELIX 5 AA5 SER E 121 ALA E 127 1 7 HELIX 6 AA6 THR E 181 SER E 187 1 7 HELIX 7 AA7 SER L 121 LYS L 126 1 6 HELIX 8 AA8 LYS L 183 LYS L 188 1 6 HELIX 9 AA9 LYS G 59 GLU G 64 1 6 HELIX 10 AB1 TRP G 96 ASN G 98 5 3 HELIX 11 AB2 ASN G 99 LYS G 117 1 19 HELIX 12 AB3 LEU G 122 CYS G 126 5 5 HELIX 13 AB4 LYS G 335 GLY G 354 1 20 HELIX 14 AB5 ASP G 368 THR G 373 1 6 HELIX 15 AB6 MET G 475 SER G 481 1 7 HELIX 16 AB7 THR T 529 SER T 534 1 6 HELIX 17 AB8 THR T 536 ASN T 543 1 8 HELIX 18 AB9 TRP T 571 TRP T 596 1 26 HELIX 19 AC1 THR T 627 SER T 636 1 10 HELIX 20 AC2 TYR T 638 GLU T 648 1 11 HELIX 21 AC3 GLN T 653 LEU T 660 1 8 HELIX 22 AC4 LYS H 61 HIS H 64 5 4 HELIX 23 AC5 THR H 83 THR H 87 5 5 HELIX 24 AC6 SER H 187 LEU H 189 5 3 SHEET 1 AA1 2 VAL D 5 GLN D 6 0 SHEET 2 AA1 2 CYS D 22 LYS D 23 -1 O LYS D 23 N VAL D 5 SHEET 1 AA2 3 VAL D 18 ILE D 20 0 SHEET 2 AA2 3 ALA D 78 ILE D 82 -1 O MET D 80 N ILE D 20 SHEET 3 AA2 3 VAL D 67 THR D 71 -1 N ILE D 68 O GLU D 81 SHEET 1 AA3 5 LYS D 57 LEU D 59 0 SHEET 2 AA3 5 GLY D 44 ILE D 51 -1 N TRP D 50 O ASN D 58 SHEET 3 AA3 5 ILE D 34 THR D 40 -1 N ILE D 34 O ILE D 51 SHEET 4 AA3 5 GLY D 88 LYS D 94 -1 O ALA D 93 N ASN D 35 SHEET 5 AA3 5 THR D 107 LEU D 109 -1 O LEU D 109 N GLY D 88 SHEET 1 AA4 3 SER D 120 PRO D 123 0 SHEET 2 AA4 3 THR D 135 TYR D 145 -1 O LEU D 141 N PHE D 122 SHEET 3 AA4 3 SER D 127 SER D 130 -1 N LYS D 129 O THR D 135 SHEET 1 AA5 4 SER D 120 PRO D 123 0 SHEET 2 AA5 4 THR D 135 TYR D 145 -1 O LEU D 141 N PHE D 122 SHEET 3 AA5 4 TYR D 176 PRO D 185 -1 O VAL D 184 N ALA D 136 SHEET 4 AA5 4 HIS D 164 THR D 165 -1 N HIS D 164 O VAL D 181 SHEET 1 AA6 3 THR D 151 TRP D 154 0 SHEET 2 AA6 3 ILE D 195 HIS D 200 -1 O ASN D 197 N SER D 153 SHEET 3 AA6 3 THR D 205 ARG D 210 -1 O THR D 205 N HIS D 200 SHEET 1 AA7 4 THR E 5 GLN E 6 0 SHEET 2 AA7 4 VAL E 19 THR E 24 -1 O THR E 24 N THR E 5 SHEET 3 AA7 4 ALA E 71 ILE E 75 -1 O ALA E 71 N CYS E 23 SHEET 4 AA7 4 PHE E 62 LYS E 66 -1 N SER E 63 O THR E 74 SHEET 1 AA8 2 SER E 9 GLY E 13 0 SHEET 2 AA8 2 LYS E 103 VAL E 106 1 O LYS E 103 N VAL E 11 SHEET 1 AA9 4 THR E 45 ILE E 48 0 SHEET 2 AA9 4 SER E 32 TRP E 38 -1 N GLN E 37 O THR E 45 SHEET 3 AA9 4 THR E 85 TYR E 91 -1 O TYR E 87 N TYR E 36 SHEET 4 AA9 4 VAL E 97 PHE E 98 -1 O VAL E 97 N SER E 90 SHEET 1 AB1 4 SER E 114 PHE E 118 0 SHEET 2 AB1 4 ALA E 130 PHE E 139 -1 O VAL E 133 N PHE E 118 SHEET 3 AB1 4 TYR E 172 LEU E 180 -1 O LEU E 180 N ALA E 130 SHEET 4 AB1 4 VAL E 159 THR E 161 -1 N GLU E 160 O TYR E 177 SHEET 1 AB2 4 SER E 114 PHE E 118 0 SHEET 2 AB2 4 ALA E 130 PHE E 139 -1 O VAL E 133 N PHE E 118 SHEET 3 AB2 4 TYR E 172 LEU E 180 -1 O LEU E 180 N ALA E 130 SHEET 4 AB2 4 SER E 165 LYS E 166 -1 N SER E 165 O ALA E 173 SHEET 1 AB3 3 THR E 145 ALA E 150 0 SHEET 2 AB3 3 TYR E 191 THR E 196 -1 O GLN E 194 N ALA E 147 SHEET 3 AB3 3 THR E 201 VAL E 206 -1 O VAL E 202 N VAL E 195 SHEET 1 AB4 3 LEU L 4 GLN L 6 0 SHEET 2 AB4 3 GLY L 19 ILE L 28 -1 O ARG L 24 N THR L 5 SHEET 3 AB4 3 PHE L 62 ILE L 75 -1 O THR L 69 N ALA L 25 SHEET 1 AB5 6 THR L 10 LEU L 13 0 SHEET 2 AB5 6 THR L 102 VAL L 106 1 O ASP L 105 N LEU L 13 SHEET 3 AB5 6 VAL L 85 TYR L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB5 6 ILE L 33 GLN L 38 -1 N TYR L 36 O SER L 87 SHEET 5 AB5 6 ARG L 45 SER L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 AB5 6 ALA L 53 ARG L 54 -1 O ALA L 53 N SER L 49 SHEET 1 AB6 4 THR L 10 LEU L 13 0 SHEET 2 AB6 4 THR L 102 VAL L 106 1 O ASP L 105 N LEU L 13 SHEET 3 AB6 4 VAL L 85 TYR L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB6 4 THR L 97 PHE L 98 -1 O THR L 97 N TYR L 90 SHEET 1 AB7 4 SER L 114 PHE L 118 0 SHEET 2 AB7 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB7 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB7 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB8 4 ALA L 153 LEU L 154 0 SHEET 2 AB8 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB8 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB8 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB9 3 LEU G 494 THR G 499 0 SHEET 2 AB9 3 TRP G 35 TYR G 40 -1 N TRP G 35 O THR G 499 SHEET 3 AB9 3 ILE T 603 PRO T 609 -1 O VAL T 608 N VAL G 36 SHEET 1 AC1 5 TRP G 45 ASP G 47 0 SHEET 2 AC1 5 TYR G 486 ILE G 491 -1 O LYS G 490 N LYS G 46 SHEET 3 AC1 5 PHE G 223 CYS G 228 -1 N LEU G 226 O LYS G 487 SHEET 4 AC1 5 VAL G 242 VAL G 245 -1 O SER G 243 N LYS G 227 SHEET 5 AC1 5 ILE G 84 LEU G 86 -1 N LEU G 86 O VAL G 242 SHEET 1 AC2 2 GLU G 91 ASN G 94 0 SHEET 2 AC2 2 THR G 236 CYS G 239 -1 O CYS G 239 N GLU G 91 SHEET 1 AC3 2 LEU G 129 CYS G 131 0 SHEET 2 AC3 2 LYS G 189 TYR G 191 -1 O TYR G 191 N LEU G 129 SHEET 1 AC4 2 SER G 158 THR G 162 0 SHEET 2 AC4 2 LYS G 169 TYR G 173 -1 O VAL G 172 N PHE G 159 SHEET 1 AC5 3 ALA G 200 GLN G 203 0 SHEET 2 AC5 3 GLN G 432 TYR G 435 1 O TYR G 435 N THR G 202 SHEET 3 AC5 3 ILE G 423 ILE G 424 -1 N ILE G 424 O MET G 434 SHEET 1 AC6 7 LEU G 259 LEU G 261 0 SHEET 2 AC6 7 GLY G 441 ARG G 456 -1 O THR G 450 N LEU G 260 SHEET 3 AC6 7 ILE G 284 ASN G 302 -1 N ARG G 298 O ILE G 443 SHEET 4 AC6 7 ALA G 329 SER G 334 -1 O ASN G 332 N ASN G 295 SHEET 5 AC6 7 SER G 413 LYS G 421 -1 O ILE G 414 N VAL G 333 SHEET 6 AC6 7 GLU G 381 CYS G 385 -1 N TYR G 384 O ARG G 419 SHEET 7 AC6 7 HIS G 374 CYS G 378 -1 N HIS G 374 O CYS G 385 SHEET 1 AC7 6 MET G 271 SER G 274 0 SHEET 2 AC7 6 ILE G 284 ASN G 302 -1 O LEU G 285 N ARG G 273 SHEET 3 AC7 6 GLY G 441 ARG G 456 -1 O ILE G 443 N ARG G 298 SHEET 4 AC7 6 GLU G 466 PRO G 470 -1 O ARG G 469 N THR G 455 SHEET 5 AC7 6 ILE G 359 PHE G 361 1 N ARG G 360 O GLU G 466 SHEET 6 AC7 6 SER G 393 THR G 394 -1 O SER G 393 N PHE G 361 SHEET 1 AC8 2 ARG G 304 ARG G 308 0 SHEET 2 AC8 2 ALA G 316 THR G 320 -1 O ALA G 319 N LYS G 305 SHEET 1 AC9 4 GLN H 3 GLN H 6 0 SHEET 2 AC9 4 VAL H 18 VAL H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AC9 4 THR H 77 LEU H 82 -1 O LEU H 80 N ILE H 20 SHEET 4 AC9 4 LEU H 67 ASP H 72 -1 N TYR H 70 O PHE H 79 SHEET 1 AD1 6 GLU H 10 ARG H 12 0 SHEET 2 AD1 6 THR H 107 VAL H 111 1 O ILE H 110 N ARG H 12 SHEET 3 AD1 6 GLY H 88 ARG H 94 -1 N GLY H 88 O VAL H 109 SHEET 4 AD1 6 ILE H 34 GLN H 39 -1 N HIS H 35 O THR H 93 SHEET 5 AD1 6 LEU H 45 ARG H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AD1 6 TYR H 57 TYR H 59 -1 O LYS H 58 N GLY H 50 SHEET 1 AD2 4 GLU H 10 ARG H 12 0 SHEET 2 AD2 4 THR H 107 VAL H 111 1 O ILE H 110 N ARG H 12 SHEET 3 AD2 4 GLY H 88 ARG H 94 -1 N GLY H 88 O VAL H 109 SHEET 4 AD2 4 VAL H 102 TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 AD3 4 PHE H 122 LEU H 124 0 SHEET 2 AD3 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AD3 4 TYR H 176 PRO H 185 -1 O SER H 180 N CYS H 140 SHEET 4 AD3 4 HIS H 164 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AD4 4 PHE H 122 LEU H 124 0 SHEET 2 AD4 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AD4 4 TYR H 176 PRO H 185 -1 O SER H 180 N CYS H 140 SHEET 4 AD4 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AD5 3 THR H 151 TRP H 154 0 SHEET 2 AD5 3 CYS H 196 HIS H 200 -1 O ASN H 199 N THR H 151 SHEET 3 AD5 3 THR H 205 VAL H 207 -1 O THR H 205 N HIS H 200 SSBOND 1 CYS D 22 CYS D 92 1555 1555 2.03 SSBOND 2 CYS D 140 CYS D 196 1555 1555 2.03 SSBOND 3 CYS E 23 CYS E 88 1555 1555 2.03 SSBOND 4 CYS E 89 CYS E 96 1555 1555 2.03 SSBOND 5 CYS E 134 CYS E 193 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 7 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 8 CYS G 54 CYS G 74 1555 1555 2.03 SSBOND 9 CYS G 119 CYS G 205 1555 1555 2.03 SSBOND 10 CYS G 126 CYS G 196 1555 1555 2.03 SSBOND 11 CYS G 131 CYS G 157 1555 1555 2.03 SSBOND 12 CYS G 218 CYS G 247 1555 1555 2.03 SSBOND 13 CYS G 228 CYS G 239 1555 1555 2.03 SSBOND 14 CYS G 296 CYS G 331 1555 1555 2.03 SSBOND 15 CYS G 378 CYS G 445 1555 1555 2.03 SSBOND 16 CYS G 385 CYS G 418 1555 1555 2.03 SSBOND 17 CYS G 501 CYS T 605 1555 1555 2.03 SSBOND 18 CYS T 598 CYS T 604 1555 1555 2.03 SSBOND 19 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 20 CYS H 98 CYS H 100A 1555 1555 2.03 SSBOND 21 CYS H 140 CYS H 196 1555 1555 2.03 LINK ND2 ASN L 27A C1 NAG A 1 1555 1555 1.44 LINK ND2 ASN G 88 C1 NAG R 1 1555 1555 1.44 LINK ND2 ASN G 133 C1 NAG G 601 1555 1555 1.45 LINK ND2 ASN G 137 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN G 156 C1 NAG J 1 1555 1555 1.45 LINK ND2 ASN G 160 C1 NAG P 1 1555 1555 1.44 LINK ND2 ASN G 197 C1 NAG Q 1 1555 1555 1.44 LINK ND2 ASN G 234 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN G 262 C1 NAG S 1 1555 1555 1.45 LINK ND2 ASN G 276 C1 NAG G 603 1555 1555 1.44 LINK ND2 ASN G 295 C1 NAG O 1 1555 1555 1.44 LINK ND2 ASN G 301 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN G 332 C1 NAG K 1 1555 1555 1.44 LINK ND2 ASN G 339 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN G 355 C1 NAG G 604 1555 1555 1.44 LINK ND2 ASN G 363 C1 NAG M 1 1555 1555 1.44 LINK ND2 ASN G 392 C1 NAG N 1 1555 1555 1.46 LINK ND2 ASN G 398 C1 NAG G 605 1555 1555 1.44 LINK ND2 ASN G 448 C1 NAG G 602 1555 1555 1.44 LINK ND2 ASN T 611 C1 NAG T 703 1555 1555 1.44 LINK ND2 ASN T 618 C1 NAG V 1 1555 1555 1.45 LINK ND2 ASN T 625 C1 NAG T 701 1555 1555 1.43 LINK ND2 ASN T 637 C1 NAG T 702 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 LINK O4 NAG A 2 C1 BMA A 3 1555 1555 1.45 LINK O3 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.45 LINK O3 BMA B 3 C1 MAN B 9 1555 1555 1.50 LINK O3 MAN B 4 C1 MAN B 5 1555 1555 1.45 LINK O6 MAN B 4 C1 MAN B 7 1555 1555 1.45 LINK O2 MAN B 5 C1 MAN B 6 1555 1555 1.44 LINK O2 MAN B 7 C1 MAN B 8 1555 1555 1.45 LINK O2 MAN B 9 C1 MAN B 10 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.46 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.45 LINK O3 BMA J 3 C1 MAN J 4 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.44 LINK O3 BMA K 3 C1 MAN K 4 1555 1555 1.44 LINK O6 BMA K 3 C1 MAN K 7 1555 1555 1.43 LINK O2 MAN K 4 C1 MAN K 5 1555 1555 1.43 LINK O2 MAN K 5 C1 MAN K 6 1555 1555 1.44 LINK O3 MAN K 7 C1 MAN K 8 1555 1555 1.44 LINK O6 MAN K 7 C1 MAN K 10 1555 1555 1.44 LINK O2 MAN K 8 C1 MAN K 9 1555 1555 1.45 LINK O2 MAN K 10 C1 MAN K 11 1555 1555 1.43 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.44 LINK O4 NAG M 2 C1 BMA M 3 1555 1555 1.44 LINK O3 BMA M 3 C1 MAN M 4 1555 1555 1.45 LINK O4 NAG N 1 C1 NAG N 2 1555 1555 1.44 LINK O4 NAG N 2 C1 BMA N 3 1555 1555 1.46 LINK O6 BMA N 3 C1 MAN N 4 1555 1555 1.45 LINK O3 BMA N 3 C1 MAN N 6 1555 1555 1.45 LINK O3 MAN N 4 C1 MAN N 5 1555 1555 1.46 LINK O4 NAG O 1 C1 NAG O 2 1555 1555 1.44 LINK O4 NAG P 1 C1 NAG P 2 1555 1555 1.45 LINK O4 NAG P 2 C1 BMA P 3 1555 1555 1.44 LINK O4 NAG Q 1 C1 NAG Q 2 1555 1555 1.45 LINK O4 NAG Q 2 C1 BMA Q 3 1555 1555 1.45 LINK O4 NAG R 1 C1 NAG R 2 1555 1555 1.44 LINK O4 NAG R 2 C1 BMA R 3 1555 1555 1.45 LINK O6 BMA R 3 C1 MAN R 4 1555 1555 1.48 LINK O3 BMA R 3 C1 MAN R 7 1555 1555 1.45 LINK O3 MAN R 4 C1 MAN R 5 1555 1555 1.47 LINK O6 MAN R 4 C1 MAN R 6 1555 1555 1.45 LINK O4 NAG S 1 C1 NAG S 2 1555 1555 1.45 LINK O4 NAG S 2 C1 BMA S 3 1555 1555 1.44 LINK O3 BMA S 3 C1 MAN S 4 1555 1555 1.45 LINK O6 BMA S 3 C1 MAN S 5 1555 1555 1.44 LINK O4 NAG U 1 C1 NAG U 2 1555 1555 1.45 LINK O4 NAG U 2 C1 BMA U 3 1555 1555 1.47 LINK O3 NAG V 1 C1 NAG V 2 1555 1555 1.44 CRYST1 247.308 247.308 257.612 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004044 0.002335 0.000000 0.00000 SCALE2 0.000000 0.004669 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003882 0.00000