HEADER IMMUNE SYSTEM 30-OCT-19 6UUD TITLE CRYSTAL STRUCTURE OF ANTIBODY 5D5 IN COMPLEX WITH PFCSP N-TERMINAL TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5D5 ANTIBODY FAB, HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5D5 ANTIBODY FAB, LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CIRCUMSPOROZOITE PROTEIN; COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 18 ORGANISM_TAXID: 5833 KEYWDS MALARIA, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR E.THAI,S.W.SCALLY,J.P.JULIEN REVDAT 4 03-APR-24 6UUD 1 REMARK REVDAT 3 27-JAN-21 6UUD 1 JRNL HETSYN REVDAT 2 29-JUL-20 6UUD 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 15-JUL-20 6UUD 0 JRNL AUTH E.THAI,G.COSTA,A.WEYRICH,R.MURUGAN,D.OYEN,Y.FLORES-GARCIA, JRNL AUTH 2 K.PRIETO,A.BOSCH,A.VALLERIANI,N.C.WU,T.PHOLCHAREE, JRNL AUTH 3 S.W.SCALLY,I.A.WILSON,H.WARDEMANN,J.P.JULIEN,E.A.LEVASHINA JRNL TITL A HIGH-AFFINITY ANTIBODY AGAINST THE CSP N-TERMINAL DOMAIN JRNL TITL 2 LACKS PLASMODIUM FALCIPARUM INHIBITORY ACTIVITY. JRNL REF J.EXP.MED. V. 217 2020 JRNL REFN ESSN 1540-9538 JRNL PMID 32790871 JRNL DOI 10.1084/JEM.20200061 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 38396 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7400 - 4.4600 0.99 2699 142 0.1469 0.1908 REMARK 3 2 4.4600 - 3.5400 0.99 2646 139 0.1386 0.1593 REMARK 3 3 3.5400 - 3.0900 0.99 2631 139 0.1590 0.2002 REMARK 3 4 3.0900 - 2.8100 0.99 2626 138 0.1801 0.2271 REMARK 3 5 2.8100 - 2.6100 0.99 2610 137 0.1985 0.2483 REMARK 3 6 2.6100 - 2.4500 0.98 2582 136 0.2064 0.2464 REMARK 3 7 2.4500 - 2.3300 0.99 2609 138 0.2038 0.2497 REMARK 3 8 2.3300 - 2.2300 0.98 2603 137 0.2034 0.3195 REMARK 3 9 2.2300 - 2.1400 0.98 2569 134 0.2127 0.2601 REMARK 3 10 2.1400 - 2.0700 0.98 2560 135 0.2161 0.2979 REMARK 3 11 2.0700 - 2.0000 0.98 2596 138 0.2204 0.2794 REMARK 3 12 2.0000 - 1.9500 0.98 2562 135 0.2171 0.2824 REMARK 3 13 1.9500 - 1.9000 0.99 2577 135 0.2379 0.2941 REMARK 3 14 1.9000 - 1.8500 0.99 2606 137 0.2761 0.3251 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.232 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3534 REMARK 3 ANGLE : 0.791 4809 REMARK 3 CHIRALITY : 0.053 549 REMARK 3 PLANARITY : 0.005 609 REMARK 3 DIHEDRAL : 13.345 2126 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7447 -14.5023 -6.4842 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.2308 REMARK 3 T33: 0.2114 T12: 0.0155 REMARK 3 T13: 0.0753 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 3.0846 L22: 4.6341 REMARK 3 L33: 5.1660 L12: -2.2992 REMARK 3 L13: 2.4764 L23: -3.5926 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: -0.3278 S13: -0.2499 REMARK 3 S21: -0.0592 S22: 0.2618 S23: 0.2483 REMARK 3 S31: 0.3939 S32: -0.0550 S33: -0.2884 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5691 -6.9893 -7.9817 REMARK 3 T TENSOR REMARK 3 T11: 0.1842 T22: 0.2636 REMARK 3 T33: 0.1614 T12: -0.0191 REMARK 3 T13: 0.0211 T23: -0.0446 REMARK 3 L TENSOR REMARK 3 L11: 8.0119 L22: 8.6539 REMARK 3 L33: 4.8684 L12: -1.0902 REMARK 3 L13: 0.2549 L23: -1.1338 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: 0.3983 S13: 0.0401 REMARK 3 S21: -0.0626 S22: 0.3155 S23: -0.1328 REMARK 3 S31: -0.4212 S32: 0.3843 S33: -0.2142 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 52A THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5662 -5.3375 -1.5276 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.2727 REMARK 3 T33: 0.2082 T12: 0.0499 REMARK 3 T13: 0.0527 T23: -0.0502 REMARK 3 L TENSOR REMARK 3 L11: 3.0345 L22: 1.1156 REMARK 3 L33: 5.2302 L12: -1.0126 REMARK 3 L13: 1.6110 L23: -0.7116 REMARK 3 S TENSOR REMARK 3 S11: -0.2240 S12: -0.4698 S13: 0.1652 REMARK 3 S21: 0.4904 S22: 0.3737 S23: 0.1619 REMARK 3 S31: -0.6189 S32: 0.0116 S33: -0.0226 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 88 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8196 -14.8015 -7.3596 REMARK 3 T TENSOR REMARK 3 T11: 0.3024 T22: 0.3373 REMARK 3 T33: 0.2057 T12: 0.0797 REMARK 3 T13: 0.0185 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 2.9686 L22: 2.4461 REMARK 3 L33: 5.3907 L12: -0.3324 REMARK 3 L13: 1.0360 L23: -0.2965 REMARK 3 S TENSOR REMARK 3 S11: 0.0557 S12: -0.1044 S13: -0.3100 REMARK 3 S21: 0.1955 S22: 0.1370 S23: -0.0974 REMARK 3 S31: 0.3705 S32: 0.8278 S33: -0.1865 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 107 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5293 -18.0190 -32.5402 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.1465 REMARK 3 T33: 0.1604 T12: 0.0181 REMARK 3 T13: 0.0081 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 1.0792 L22: 3.6767 REMARK 3 L33: 1.7383 L12: -0.3602 REMARK 3 L13: -0.4888 L23: 1.6718 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0318 S13: -0.0440 REMARK 3 S21: -0.0813 S22: -0.0341 S23: 0.1269 REMARK 3 S31: -0.0573 S32: -0.1656 S33: 0.0078 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 204 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.0462 -24.1544 -32.8542 REMARK 3 T TENSOR REMARK 3 T11: 0.2379 T22: 0.2566 REMARK 3 T33: 0.3551 T12: -0.0339 REMARK 3 T13: 0.0138 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.8573 L22: 2.4846 REMARK 3 L33: 0.7715 L12: 0.6513 REMARK 3 L13: 1.1674 L23: 0.1554 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: 0.1218 S13: -0.3281 REMARK 3 S21: 0.1385 S22: 0.0890 S23: 0.4686 REMARK 3 S31: 0.3317 S32: -0.3201 S33: -0.0367 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7947 -7.6245 -21.5619 REMARK 3 T TENSOR REMARK 3 T11: 0.2319 T22: 0.3761 REMARK 3 T33: 0.2953 T12: -0.1167 REMARK 3 T13: 0.0366 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 3.3143 L22: 5.6913 REMARK 3 L33: 6.8985 L12: -0.9719 REMARK 3 L13: 0.2244 L23: 3.5607 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: -0.2640 S13: 0.4168 REMARK 3 S21: 0.0851 S22: 0.0242 S23: -0.5237 REMARK 3 S31: -0.4171 S32: 0.7952 S33: -0.0467 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5645 -13.9730 -14.0409 REMARK 3 T TENSOR REMARK 3 T11: 0.1943 T22: 0.3993 REMARK 3 T33: 0.1903 T12: 0.0042 REMARK 3 T13: 0.0069 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 3.0791 L22: 3.1066 REMARK 3 L33: 5.2210 L12: 0.0275 REMARK 3 L13: 0.6950 L23: 1.7722 REMARK 3 S TENSOR REMARK 3 S11: -0.0979 S12: -0.5712 S13: 0.0071 REMARK 3 S21: 0.3189 S22: 0.0904 S23: -0.2432 REMARK 3 S31: 0.1990 S32: 0.5798 S33: -0.0081 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 102 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5521 -14.6656 -36.8767 REMARK 3 T TENSOR REMARK 3 T11: 0.1861 T22: 0.2191 REMARK 3 T33: 0.2492 T12: 0.0354 REMARK 3 T13: 0.0283 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.4450 L22: 3.8144 REMARK 3 L33: 8.5233 L12: 1.3574 REMARK 3 L13: 1.9380 L23: 5.3135 REMARK 3 S TENSOR REMARK 3 S11: -0.0958 S12: 0.1253 S13: 0.0075 REMARK 3 S21: -0.1180 S22: 0.0996 S23: -0.1179 REMARK 3 S31: -0.0265 S32: 0.5264 S33: 0.0026 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8261 -16.8818 -43.5669 REMARK 3 T TENSOR REMARK 3 T11: 0.2094 T22: 0.2279 REMARK 3 T33: 0.2317 T12: -0.0134 REMARK 3 T13: -0.0412 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.9552 L22: 2.4385 REMARK 3 L33: 2.5911 L12: -0.7685 REMARK 3 L13: -0.4443 L23: -0.2050 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.1848 S13: -0.1576 REMARK 3 S21: -0.0703 S22: 0.0237 S23: 0.4046 REMARK 3 S31: 0.0753 S32: -0.4187 S33: -0.0512 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 129 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1380 -11.3636 -45.3908 REMARK 3 T TENSOR REMARK 3 T11: 0.2134 T22: 0.1703 REMARK 3 T33: 0.1731 T12: 0.0135 REMARK 3 T13: -0.0091 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 5.7655 L22: 2.2476 REMARK 3 L33: 1.6680 L12: -1.3669 REMARK 3 L13: 0.2635 L23: -0.4288 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.0750 S13: 0.2716 REMARK 3 S21: -0.0861 S22: 0.0073 S23: -0.1167 REMARK 3 S31: -0.0711 S32: 0.1208 S33: -0.0003 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 151 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0058 -11.1638 -41.6174 REMARK 3 T TENSOR REMARK 3 T11: 0.1577 T22: 0.1282 REMARK 3 T33: 0.1927 T12: -0.0470 REMARK 3 T13: 0.0286 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 7.6499 L22: 3.7360 REMARK 3 L33: 5.0657 L12: -4.3402 REMARK 3 L13: 4.4340 L23: -2.4748 REMARK 3 S TENSOR REMARK 3 S11: -0.0484 S12: 0.0799 S13: 0.0171 REMARK 3 S21: -0.0299 S22: 0.0697 S23: 0.0530 REMARK 3 S31: -0.0330 S32: 0.1224 S33: -0.0658 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8706 -11.8952 -51.3477 REMARK 3 T TENSOR REMARK 3 T11: 0.2811 T22: 0.2280 REMARK 3 T33: 0.1855 T12: -0.0055 REMARK 3 T13: -0.0120 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 4.0540 L22: 1.1670 REMARK 3 L33: 2.3047 L12: -0.5164 REMARK 3 L13: -0.6768 L23: 0.3781 REMARK 3 S TENSOR REMARK 3 S11: 0.0679 S12: 0.6792 S13: 0.0995 REMARK 3 S21: -0.2729 S22: -0.0351 S23: 0.1008 REMARK 3 S31: 0.0230 S32: -0.3570 S33: -0.0662 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7113 -11.3925 6.6658 REMARK 3 T TENSOR REMARK 3 T11: 0.4620 T22: 0.7198 REMARK 3 T33: 0.2876 T12: 0.0372 REMARK 3 T13: 0.0023 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 8.6688 L22: 6.9530 REMARK 3 L33: 3.8458 L12: 3.4668 REMARK 3 L13: 4.3326 L23: 4.7829 REMARK 3 S TENSOR REMARK 3 S11: -0.1790 S12: -1.0485 S13: 0.1071 REMARK 3 S21: 0.5739 S22: 0.3045 S23: -0.3244 REMARK 3 S31: -0.5001 S32: 0.8775 S33: -0.0919 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6UUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000245190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97959 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INTERNAL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 0.2 M DI-AMMONIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.45050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS H 216 REMARK 465 CYS L 214 REMARK 465 LYS A 93 REMARK 465 LEU A 94 REMARK 465 LYS A 95 REMARK 465 GLN A 96 REMARK 465 PRO A 97 REMARK 465 ALA A 98 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN H 43 CG CD OE1 NE2 REMARK 470 LYS H 62 CG CD CE NZ REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 LYS L 188 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN H 43 -160.51 -113.34 REMARK 500 ASP H 144 61.73 70.29 REMARK 500 THR H 160 -31.16 -130.14 REMARK 500 THR L 30 -119.39 48.61 REMARK 500 ALA L 51 -35.88 74.13 REMARK 500 ASP A 82 -164.51 -110.83 REMARK 500 REMARK 500 REMARK: NULL DBREF 6UUD H 1 216 PDB 6UUD 6UUD 1 216 DBREF 6UUD L 1 214 PDB 6UUD 6UUD 1 214 DBREF 6UUD A 81 98 PDB 6UUD 6UUD 81 98 SEQRES 1 H 221 GLN VAL HIS LEU GLN GLN SER GLY GLY GLU VAL ALA ARG SEQRES 2 H 221 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR GLY TYR GLY LEU SER TRP VAL LYS GLN SEQRES 4 H 221 ARG THR GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE TYR SEQRES 5 H 221 PRO ARG SER GLY ASN THR TYR TYR ASN GLU LYS PHE LYS SEQRES 6 H 221 GLY LYS ALA THR LEU THR ALA ASP LYS SER SER SER THR SEQRES 7 H 221 ALA TYR MET GLU LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 H 221 ALA VAL TYR PHE CYS ALA ARG SER TRP GLY ASN SER SER SEQRES 9 H 221 PHE VAL TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 221 ALA ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 221 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 221 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 221 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 221 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 221 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 221 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 221 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 L 214 SER ILE VAL MET THR GLN THR PRO LYS PHE LEU LEU VAL SEQRES 2 L 214 SER ALA GLY ASP ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 214 GLN SER VAL THR ASN ASP VAL THR TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY GLN SER PRO LYS LEU LEU ILE TYR TYR ALA SER SEQRES 5 L 214 ASN ARG TYR THR GLY VAL PRO ASP ARG PHE THR GLY SER SEQRES 6 L 214 GLY TYR GLY THR ASP PHE THR PHE THR ILE SER THR VAL SEQRES 7 L 214 GLN ALA GLU ASP LEU ALA VAL TYR PHE CYS GLN GLN ASP SEQRES 8 L 214 TYR SER SER PRO PHE THR PHE GLY SER GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 A 18 GLU ASP ASN GLU LYS LEU ARG LYS PRO LYS HIS LYS LYS SEQRES 2 A 18 LEU LYS GLN PRO ALA HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET EDO H 304 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *416(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 GLU H 61 LYS H 64 5 4 HELIX 3 AA3 THR H 83 SER H 87 5 5 HELIX 4 AA4 SER H 127 LYS H 129 5 3 HELIX 5 AA5 SER H 156 ALA H 158 5 3 HELIX 6 AA6 SER H 187 LEU H 189 5 3 HELIX 7 AA7 LYS H 201 ASN H 204 5 4 HELIX 8 AA8 GLN L 79 LEU L 83 5 5 HELIX 9 AA9 SER L 121 LYS L 126 1 6 HELIX 10 AB1 LYS L 183 LYS L 188 1 6 HELIX 11 AB2 ASN A 83 LYS A 92 1 10 SHEET 1 AA1 4 HIS H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA1 4 THR H 77 LEU H 82 -1 O MET H 80 N LEU H 20 SHEET 4 AA1 4 ALA H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AA2 6 GLU H 10 ALA H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA2 6 ALA H 88 TRP H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 LEU H 34 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O TYR H 58 N GLU H 50 SHEET 1 AA3 4 GLU H 10 ALA H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA3 4 ALA H 88 TRP H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA3 4 SER H 99 TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 THR H 131 SER H 132 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 LYS H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AA7 4 MET L 4 THR L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O THR L 22 N THR L 7 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O PHE L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 TYR L 67 -1 N THR L 63 O THR L 74 SHEET 1 AA8 6 PHE L 10 SER L 14 0 SHEET 2 AA8 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA8 6 VAL L 33 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 PHE L 10 SER L 14 0 SHEET 2 AA9 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.06 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.02 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.05 LINK ND2 ASN H 98 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.37 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.37 CISPEP 1 PHE H 146 PRO H 147 0 -5.50 CISPEP 2 GLU H 148 PRO H 149 0 -1.09 CISPEP 3 THR L 7 PRO L 8 0 -5.41 CISPEP 4 SER L 94 PRO L 95 0 -4.79 CISPEP 5 TYR L 140 PRO L 141 0 0.17 CRYST1 52.601 60.901 72.435 90.00 97.67 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019011 0.000000 0.002559 0.00000 SCALE2 0.000000 0.016420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013930 0.00000