HEADER HYDROLASE 05-DEC-19 6V6N TITLE THE CRYSTAL STRUCTURE OF A CLASS D BETA-LACTAMASE FROM AGROBACTERIUM TITLE 2 TUMEFACIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM RADIOBACTER; SOURCE 3 ORGANISM_COMMON: AGROBACTERIUM TUMEFACIENS; SOURCE 4 ORGANISM_TAXID: 358; SOURCE 5 GENE: OXA, ATA6_05530, BV900_07365; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS CLASS D BETA-LACTAMASE, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,R.WU,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 2 INFECTIOUS DISEASES (CSGID) REVDAT 1 18-DEC-19 6V6N 0 JRNL AUTH K.TAN,R.WU,M.ENDRES,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A CLASS D BETA-LACTAMASE FROM JRNL TITL 2 AGROBACTERIUM TUMEFACIENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 102587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 5113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9000 - 5.7500 0.94 3211 182 0.1980 0.2034 REMARK 3 2 5.7500 - 4.5600 0.94 3197 157 0.1747 0.1878 REMARK 3 3 4.5600 - 3.9900 0.96 3231 165 0.1707 0.2098 REMARK 3 4 3.9900 - 3.6200 0.97 3233 194 0.1891 0.2310 REMARK 3 5 3.6200 - 3.3600 0.96 3242 157 0.2012 0.2288 REMARK 3 6 3.3600 - 3.1700 0.96 3216 174 0.2234 0.2458 REMARK 3 7 3.1700 - 3.0100 0.97 3279 162 0.2198 0.2623 REMARK 3 8 3.0100 - 2.8800 0.98 3294 161 0.2200 0.2384 REMARK 3 9 2.8800 - 2.7700 0.98 3275 163 0.2273 0.2684 REMARK 3 10 2.7700 - 2.6700 0.98 3307 172 0.2299 0.2750 REMARK 3 11 2.6700 - 2.5900 0.96 3242 159 0.2314 0.2848 REMARK 3 12 2.5900 - 2.5100 0.97 3223 175 0.2266 0.2878 REMARK 3 13 2.5100 - 2.4500 0.98 3277 184 0.2316 0.2779 REMARK 3 14 2.4500 - 2.3900 0.98 3284 159 0.2198 0.2429 REMARK 3 15 2.3900 - 2.3300 0.98 3262 189 0.2236 0.2808 REMARK 3 16 2.3300 - 2.2800 0.99 3308 193 0.2188 0.2690 REMARK 3 17 2.2800 - 2.2400 0.99 3262 171 0.2233 0.2855 REMARK 3 18 2.2400 - 2.2000 0.98 3314 179 0.2204 0.2852 REMARK 3 19 2.2000 - 2.1600 0.96 3180 170 0.2245 0.2684 REMARK 3 20 2.1600 - 2.1200 0.97 3270 165 0.2248 0.2982 REMARK 3 21 2.1200 - 2.0900 0.97 3214 167 0.2320 0.2811 REMARK 3 22 2.0900 - 2.0500 0.98 3291 184 0.2322 0.2731 REMARK 3 23 2.0500 - 2.0200 0.98 3312 158 0.2386 0.3395 REMARK 3 24 2.0200 - 1.9900 0.98 3239 170 0.2429 0.2938 REMARK 3 25 1.9900 - 1.9700 0.99 3349 168 0.2532 0.2913 REMARK 3 26 1.9700 - 1.9400 0.99 3258 172 0.2501 0.2980 REMARK 3 27 1.9400 - 1.9200 0.99 3301 180 0.2569 0.2808 REMARK 3 28 1.9200 - 1.8900 0.99 3311 167 0.2563 0.3099 REMARK 3 29 1.8900 - 1.8700 0.98 3257 156 0.2760 0.3609 REMARK 3 30 1.8700 - 1.8500 0.85 2835 160 0.2838 0.3265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.253 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.063 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7985 REMARK 3 ANGLE : 0.711 10882 REMARK 3 CHIRALITY : 0.048 1163 REMARK 3 PLANARITY : 0.006 1435 REMARK 3 DIHEDRAL : 17.136 4749 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 30 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9711 -45.6479 17.9223 REMARK 3 T TENSOR REMARK 3 T11: 0.5344 T22: 0.3576 REMARK 3 T33: 0.5134 T12: 0.0768 REMARK 3 T13: -0.0823 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 5.3684 L22: 6.3286 REMARK 3 L33: 1.5960 L12: -5.7730 REMARK 3 L13: 0.3783 L23: -0.6318 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: 0.0666 S13: 0.2922 REMARK 3 S21: -0.0749 S22: 0.1210 S23: 0.0868 REMARK 3 S31: -0.6371 S32: -0.2084 S33: -0.1909 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2048 -52.7950 19.3449 REMARK 3 T TENSOR REMARK 3 T11: 0.2970 T22: 0.2936 REMARK 3 T33: 0.2716 T12: 0.0213 REMARK 3 T13: -0.0347 T23: -0.0675 REMARK 3 L TENSOR REMARK 3 L11: 3.0664 L22: 2.5949 REMARK 3 L33: 2.0825 L12: 0.3688 REMARK 3 L13: 1.0767 L23: -0.0340 REMARK 3 S TENSOR REMARK 3 S11: 0.2246 S12: 0.3430 S13: -0.1156 REMARK 3 S21: -0.2851 S22: 0.0802 S23: -0.1040 REMARK 3 S31: 0.0015 S32: 0.1606 S33: -0.2788 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1735 -41.9582 34.1511 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.5887 REMARK 3 T33: 0.8485 T12: -0.2253 REMARK 3 T13: -0.2797 T23: -0.4340 REMARK 3 L TENSOR REMARK 3 L11: 1.5564 L22: 4.3055 REMARK 3 L33: 1.3899 L12: -1.3731 REMARK 3 L13: -1.3870 L23: 0.8337 REMARK 3 S TENSOR REMARK 3 S11: -0.9297 S12: 0.0048 S13: 0.4983 REMARK 3 S21: 0.6622 S22: -0.0417 S23: 0.0862 REMARK 3 S31: -0.3219 S32: 0.3166 S33: 0.4039 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4449 -41.4654 24.0133 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.3489 REMARK 3 T33: 0.5522 T12: -0.0880 REMARK 3 T13: 0.0735 T23: -0.0850 REMARK 3 L TENSOR REMARK 3 L11: 2.3830 L22: 2.9766 REMARK 3 L33: 3.7228 L12: -0.3844 REMARK 3 L13: 0.1084 L23: -0.7632 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: -0.0368 S13: 0.6790 REMARK 3 S21: -0.0806 S22: 0.1521 S23: -0.8011 REMARK 3 S31: -0.4560 S32: 0.5051 S33: -0.1878 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8997 -53.7565 23.0858 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.2717 REMARK 3 T33: 0.2358 T12: -0.0087 REMARK 3 T13: 0.0125 T23: -0.0479 REMARK 3 L TENSOR REMARK 3 L11: 2.2198 L22: 2.4884 REMARK 3 L33: 2.4391 L12: 0.8007 REMARK 3 L13: -0.9035 L23: -0.3489 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.0068 S13: 0.0891 REMARK 3 S21: -0.0895 S22: 0.0984 S23: -0.3057 REMARK 3 S31: 0.0775 S32: 0.1684 S33: 0.0180 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5208 -46.9589 24.5305 REMARK 3 T TENSOR REMARK 3 T11: 0.2004 T22: 0.2717 REMARK 3 T33: 0.2627 T12: 0.0166 REMARK 3 T13: -0.0354 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 3.6014 L22: 3.1986 REMARK 3 L33: 3.2402 L12: -3.3299 REMARK 3 L13: 0.7257 L23: -1.5812 REMARK 3 S TENSOR REMARK 3 S11: 0.1079 S12: 0.0355 S13: 0.3315 REMARK 3 S21: 0.0283 S22: -0.1763 S23: 0.0009 REMARK 3 S31: -0.3022 S32: -0.0533 S33: 0.0863 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2095 -56.9740 29.5708 REMARK 3 T TENSOR REMARK 3 T11: 0.2576 T22: 0.3409 REMARK 3 T33: 0.3289 T12: 0.0184 REMARK 3 T13: -0.1100 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 5.3279 L22: 4.4722 REMARK 3 L33: 6.2860 L12: 1.3810 REMARK 3 L13: -0.1021 L23: 4.5032 REMARK 3 S TENSOR REMARK 3 S11: 0.0640 S12: -0.2546 S13: 0.3069 REMARK 3 S21: -0.3415 S22: -0.8006 S23: 1.8615 REMARK 3 S31: 0.1246 S32: -1.0323 S33: 0.5473 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2525 -14.1946 -11.3757 REMARK 3 T TENSOR REMARK 3 T11: 0.2357 T22: 0.3139 REMARK 3 T33: 0.2691 T12: 0.0521 REMARK 3 T13: -0.1031 T23: -0.0685 REMARK 3 L TENSOR REMARK 3 L11: 6.3232 L22: 6.0397 REMARK 3 L33: 4.1579 L12: -0.6035 REMARK 3 L13: -1.1120 L23: -2.2988 REMARK 3 S TENSOR REMARK 3 S11: -0.0872 S12: -0.1850 S13: 0.1086 REMARK 3 S21: -0.4738 S22: 0.1450 S23: 0.6138 REMARK 3 S31: -0.0964 S32: -0.2466 S33: -0.0223 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4514 -25.8436 4.8200 REMARK 3 T TENSOR REMARK 3 T11: 0.3504 T22: 0.3466 REMARK 3 T33: 0.2456 T12: 0.1958 REMARK 3 T13: -0.0200 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 4.0533 L22: 2.0381 REMARK 3 L33: 3.0712 L12: -0.0895 REMARK 3 L13: 0.5427 L23: -0.1536 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: 0.1501 S13: -0.2537 REMARK 3 S21: -0.1884 S22: -0.0982 S23: -0.1752 REMARK 3 S31: 0.5898 S32: 0.3830 S33: 0.0483 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 148 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5909 -15.1250 -1.4458 REMARK 3 T TENSOR REMARK 3 T11: 0.1491 T22: 0.2432 REMARK 3 T33: 0.2320 T12: 0.0783 REMARK 3 T13: 0.0027 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 1.3731 L22: 0.8191 REMARK 3 L33: 2.3208 L12: 0.1287 REMARK 3 L13: 0.0824 L23: 0.1498 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: 0.0134 S13: -0.0592 REMARK 3 S21: 0.0152 S22: 0.0677 S23: -0.1884 REMARK 3 S31: 0.1594 S32: 0.1295 S33: 0.0226 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 210 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0457 -18.4460 -13.8959 REMARK 3 T TENSOR REMARK 3 T11: 0.2168 T22: 0.3282 REMARK 3 T33: 0.2323 T12: 0.0339 REMARK 3 T13: 0.0046 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 3.4708 L22: 2.3298 REMARK 3 L33: 3.2988 L12: -0.1058 REMARK 3 L13: 0.6058 L23: 1.1205 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: 0.3031 S13: -0.1359 REMARK 3 S21: -0.3187 S22: -0.2194 S23: -0.1236 REMARK 3 S31: 0.3090 S32: 0.0175 S33: 0.0993 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 28 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9330 -15.6191 43.2105 REMARK 3 T TENSOR REMARK 3 T11: 0.2312 T22: 0.2762 REMARK 3 T33: 0.3192 T12: 0.0573 REMARK 3 T13: -0.1078 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 3.7354 L22: 5.3065 REMARK 3 L33: 1.9915 L12: -1.9751 REMARK 3 L13: 0.3127 L23: -1.9715 REMARK 3 S TENSOR REMARK 3 S11: 0.1808 S12: 0.0175 S13: 0.1480 REMARK 3 S21: -0.3853 S22: -0.3022 S23: 0.3079 REMARK 3 S31: 0.0826 S32: -0.2481 S33: 0.1658 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 58 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8665 -21.2418 58.3591 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: 0.1558 REMARK 3 T33: 0.2006 T12: -0.0312 REMARK 3 T13: -0.0142 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.3758 L22: 1.4535 REMARK 3 L33: 8.0462 L12: 0.2561 REMARK 3 L13: 0.8711 L23: 1.7398 REMARK 3 S TENSOR REMARK 3 S11: 0.0718 S12: -0.1371 S13: 0.1277 REMARK 3 S21: 0.0828 S22: 0.1006 S23: -0.1345 REMARK 3 S31: -0.1124 S32: 0.3678 S33: -0.2281 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7556 -28.3735 58.2895 REMARK 3 T TENSOR REMARK 3 T11: 0.2368 T22: 0.3639 REMARK 3 T33: 0.4914 T12: 0.0360 REMARK 3 T13: -0.0553 T23: 0.0995 REMARK 3 L TENSOR REMARK 3 L11: 2.0743 L22: 7.7225 REMARK 3 L33: 5.9788 L12: -2.0594 REMARK 3 L13: -0.3106 L23: 2.7470 REMARK 3 S TENSOR REMARK 3 S11: 0.0550 S12: -0.1725 S13: -0.4949 REMARK 3 S21: 0.0584 S22: 0.0342 S23: -0.6926 REMARK 3 S31: 0.5845 S32: 0.4968 S33: -0.0978 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 93 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9200 -27.0160 58.5282 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.2024 REMARK 3 T33: 0.2455 T12: -0.0116 REMARK 3 T13: -0.0590 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 5.4955 L22: 4.1445 REMARK 3 L33: 4.1589 L12: -1.3165 REMARK 3 L13: -1.5769 L23: 0.5772 REMARK 3 S TENSOR REMARK 3 S11: 0.1051 S12: -0.1180 S13: -0.1144 REMARK 3 S21: 0.0292 S22: -0.2128 S23: -0.3419 REMARK 3 S31: 0.3277 S32: 0.3840 S33: 0.0761 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 133 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1207 -31.5327 57.4254 REMARK 3 T TENSOR REMARK 3 T11: 0.2215 T22: 0.1868 REMARK 3 T33: 0.2482 T12: -0.0775 REMARK 3 T13: -0.0072 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 4.4296 L22: 2.1063 REMARK 3 L33: 3.6109 L12: 0.0421 REMARK 3 L13: -0.0815 L23: -0.4359 REMARK 3 S TENSOR REMARK 3 S11: -0.0946 S12: -0.0580 S13: -0.2343 REMARK 3 S21: 0.1993 S22: -0.0525 S23: 0.1610 REMARK 3 S31: 0.5102 S32: -0.3230 S33: 0.1323 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 162 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7526 -12.7285 53.4056 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.1645 REMARK 3 T33: 0.1952 T12: 0.0031 REMARK 3 T13: -0.0142 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 3.6904 L22: 5.1963 REMARK 3 L33: 9.6723 L12: 4.1894 REMARK 3 L13: 5.2769 L23: 7.0181 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.1139 S13: -0.1785 REMARK 3 S21: -0.3704 S22: -0.1166 S23: -0.2623 REMARK 3 S31: -0.2578 S32: -0.3569 S33: 0.1929 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 175 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3804 -11.0748 61.1038 REMARK 3 T TENSOR REMARK 3 T11: 0.1928 T22: 0.2881 REMARK 3 T33: 0.2172 T12: -0.0126 REMARK 3 T13: -0.0021 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 4.1930 L22: 4.7101 REMARK 3 L33: 8.0544 L12: -0.6876 REMARK 3 L13: -5.7220 L23: 1.2664 REMARK 3 S TENSOR REMARK 3 S11: 0.3622 S12: 0.0622 S13: 0.4778 REMARK 3 S21: 0.0814 S22: -0.1221 S23: -0.5081 REMARK 3 S31: -0.6229 S32: -0.0534 S33: -0.2221 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 191 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3346 -12.8519 42.4559 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.2861 REMARK 3 T33: 0.3392 T12: 0.0393 REMARK 3 T13: 0.1187 T23: 0.0998 REMARK 3 L TENSOR REMARK 3 L11: 1.8556 L22: 5.5679 REMARK 3 L33: 3.6269 L12: 0.5477 REMARK 3 L13: -0.5894 L23: -2.1225 REMARK 3 S TENSOR REMARK 3 S11: 0.5270 S12: 0.5496 S13: 0.3535 REMARK 3 S21: 0.3396 S22: -0.3019 S23: -0.0990 REMARK 3 S31: -0.2355 S32: 0.3643 S33: -0.1471 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 210 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8372 -28.0521 44.2399 REMARK 3 T TENSOR REMARK 3 T11: 0.3181 T22: 0.2765 REMARK 3 T33: 0.3228 T12: -0.0420 REMARK 3 T13: -0.0364 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 3.1933 L22: 4.6744 REMARK 3 L33: 4.1570 L12: -1.7701 REMARK 3 L13: -0.2820 L23: 0.4634 REMARK 3 S TENSOR REMARK 3 S11: 0.5589 S12: -0.1102 S13: -0.4004 REMARK 3 S21: 0.1958 S22: -0.8485 S23: 0.6205 REMARK 3 S31: 1.0039 S32: -0.4684 S33: 0.0689 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 234 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8083 -18.7803 39.7567 REMARK 3 T TENSOR REMARK 3 T11: 0.2997 T22: 0.3029 REMARK 3 T33: 0.2282 T12: 0.0529 REMARK 3 T13: 0.0342 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 4.0366 L22: 2.0733 REMARK 3 L33: 3.3947 L12: 0.7602 REMARK 3 L13: -0.2787 L23: 2.4424 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: 0.3689 S13: -0.0989 REMARK 3 S21: -0.8563 S22: 0.1055 S23: -0.2467 REMARK 3 S31: -0.1293 S32: 0.1512 S33: -0.2564 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 254 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2918 -14.0010 36.2433 REMARK 3 T TENSOR REMARK 3 T11: 0.3386 T22: 0.3687 REMARK 3 T33: 0.3064 T12: 0.0678 REMARK 3 T13: 0.0709 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 7.8030 L22: 8.2607 REMARK 3 L33: 2.3600 L12: 2.9519 REMARK 3 L13: 0.6747 L23: -0.3145 REMARK 3 S TENSOR REMARK 3 S11: 0.2298 S12: 0.9635 S13: 0.7482 REMARK 3 S21: -0.4717 S22: -0.4269 S23: -0.7134 REMARK 3 S31: -0.5529 S32: 0.0123 S33: 0.0829 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 28 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0877 -2.8867 34.7682 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.1691 REMARK 3 T33: 0.2211 T12: 0.0083 REMARK 3 T13: -0.0268 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 3.2218 L22: 3.4942 REMARK 3 L33: 2.4160 L12: -0.9482 REMARK 3 L13: 0.7777 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: -0.0792 S12: -0.2530 S13: 0.1761 REMARK 3 S21: 0.3555 S22: 0.0679 S23: -0.4760 REMARK 3 S31: 0.0525 S32: 0.1313 S33: 0.0003 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 73 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5751 6.4298 18.4011 REMARK 3 T TENSOR REMARK 3 T11: 0.3357 T22: 0.3100 REMARK 3 T33: 0.2460 T12: 0.0664 REMARK 3 T13: -0.0391 T23: 0.0818 REMARK 3 L TENSOR REMARK 3 L11: 2.1697 L22: 5.0710 REMARK 3 L33: 3.2177 L12: -0.1048 REMARK 3 L13: -0.0507 L23: 0.4036 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: 0.3506 S13: 0.2924 REMARK 3 S21: -0.8069 S22: -0.0003 S23: 0.0899 REMARK 3 S31: -0.4272 S32: -0.1085 S33: -0.0480 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 110 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8142 8.6759 35.2899 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.1782 REMARK 3 T33: 0.2307 T12: 0.0533 REMARK 3 T13: 0.0253 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.7606 L22: 1.7519 REMARK 3 L33: 3.8426 L12: 0.5833 REMARK 3 L13: 0.1175 L23: 0.6260 REMARK 3 S TENSOR REMARK 3 S11: 0.1012 S12: -0.1157 S13: 0.3869 REMARK 3 S21: 0.0123 S22: -0.0911 S23: 0.2711 REMARK 3 S31: -0.2814 S32: -0.2319 S33: 0.0287 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 162 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7376 -7.9868 36.6573 REMARK 3 T TENSOR REMARK 3 T11: 0.2994 T22: 0.2624 REMARK 3 T33: 0.2577 T12: 0.0540 REMARK 3 T13: 0.0359 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 4.6862 L22: 5.1178 REMARK 3 L33: 2.8779 L12: 4.9111 REMARK 3 L13: 3.6490 L23: 3.8272 REMARK 3 S TENSOR REMARK 3 S11: 0.2479 S12: -0.4921 S13: -0.0278 REMARK 3 S21: 0.9198 S22: -0.2730 S23: 0.0334 REMARK 3 S31: 0.4554 S32: -0.0379 S33: -0.0131 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 175 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3676 -9.3204 29.9674 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1570 REMARK 3 T33: 0.2270 T12: 0.0106 REMARK 3 T13: 0.0177 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 5.5460 L22: 4.4706 REMARK 3 L33: 7.5654 L12: -0.4073 REMARK 3 L13: -3.7443 L23: -0.3698 REMARK 3 S TENSOR REMARK 3 S11: -0.2233 S12: 0.0884 S13: -0.2937 REMARK 3 S21: -0.0731 S22: 0.0099 S23: 0.1915 REMARK 3 S31: 0.8046 S32: -0.2444 S33: 0.1955 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 193 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4056 1.0456 27.6007 REMARK 3 T TENSOR REMARK 3 T11: 0.1929 T22: 0.1776 REMARK 3 T33: 0.1776 T12: 0.0076 REMARK 3 T13: -0.0226 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 4.0719 L22: 5.0727 REMARK 3 L33: 4.3585 L12: -0.0104 REMARK 3 L13: -0.7151 L23: 1.5358 REMARK 3 S TENSOR REMARK 3 S11: 0.1255 S12: -0.0269 S13: 0.5415 REMARK 3 S21: 0.2509 S22: -0.2337 S23: -0.0637 REMARK 3 S31: -0.2377 S32: 0.2250 S33: 0.1121 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 234 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6359 -1.0172 27.9750 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.3020 REMARK 3 T33: 0.2316 T12: -0.0186 REMARK 3 T13: -0.0250 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 3.4234 L22: 5.1461 REMARK 3 L33: 4.2114 L12: 0.7958 REMARK 3 L13: -0.6453 L23: 0.2651 REMARK 3 S TENSOR REMARK 3 S11: -0.2677 S12: 0.3873 S13: 0.1014 REMARK 3 S21: -0.2316 S22: 0.4389 S23: -0.5911 REMARK 3 S31: -0.1374 S32: 0.4899 S33: -0.1490 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 254 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7529 -5.4047 23.7206 REMARK 3 T TENSOR REMARK 3 T11: 0.2340 T22: 0.2299 REMARK 3 T33: 0.2604 T12: 0.0165 REMARK 3 T13: 0.0115 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 5.6726 L22: 4.9998 REMARK 3 L33: 7.2163 L12: 1.2421 REMARK 3 L13: -0.8835 L23: -1.3183 REMARK 3 S TENSOR REMARK 3 S11: -0.1109 S12: -0.0504 S13: 0.1726 REMARK 3 S21: -0.2596 S22: -0.2464 S23: -0.9470 REMARK 3 S31: 0.2932 S32: 0.7008 S33: 0.3117 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6V6N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000245842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102685 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.50700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M DL-MALIC ACID, 20% (W/V) REMARK 280 PEG3350, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.82750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 273 REMARK 465 SER B 23 REMARK 465 ASN B 24 REMARK 465 ALA B 25 REMARK 465 GLN B 26 REMARK 465 GLN B 27 REMARK 465 SER C 23 REMARK 465 ASN C 24 REMARK 465 ALA C 25 REMARK 465 GLN C 26 REMARK 465 GLN C 27 REMARK 465 SER D 23 REMARK 465 ASN D 24 REMARK 465 ALA D 25 REMARK 465 GLN D 26 REMARK 465 GLN D 27 REMARK 465 HIS D 272 REMARK 465 ARG D 273 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 26 CG CD OE1 NE2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 GLU A 252 CD OE1 OE2 REMARK 470 GLN B 29 CG CD OE1 NE2 REMARK 470 LYS B 86 CE NZ REMARK 470 ARG B 181 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 LYS B 215 CG CD CE NZ REMARK 470 ASN B 217 CG OD1 ND2 REMARK 470 LYS C 248 CD CE NZ REMARK 470 ARG C 273 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 214 CG CD OE1 OE2 REMARK 470 LYS D 215 CG CD CE NZ REMARK 470 GLN D 236 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 51 19.05 58.67 REMARK 500 ALA A 58 -136.65 48.53 REMARK 500 ASP A 77 -153.28 -141.95 REMARK 500 PRO A 143 99.16 -65.13 REMARK 500 SER A 157 -41.80 -162.92 REMARK 500 PRO A 197 153.66 -48.74 REMARK 500 ALA B 58 -138.84 57.28 REMARK 500 SER B 157 -39.22 -169.70 REMARK 500 HIS B 272 31.46 -89.37 REMARK 500 ALA C 58 -134.62 49.10 REMARK 500 ASP C 77 -159.11 -153.56 REMARK 500 SER C 157 -36.52 -167.87 REMARK 500 GLU C 198 36.30 70.04 REMARK 500 ALA C 270 32.23 -93.95 REMARK 500 GLN D 29 42.81 -81.37 REMARK 500 ALA D 58 -137.55 52.42 REMARK 500 ASP D 77 -155.24 -150.75 REMARK 500 SER D 157 -34.74 -170.58 REMARK 500 ASP D 213 -147.95 -87.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97214 RELATED DB: TARGETTRACK DBREF1 6V6N A 26 273 UNP A0A1V2APZ1_RHIRD DBREF2 6V6N A A0A1V2APZ1 26 273 DBREF1 6V6N B 26 273 UNP A0A1V2APZ1_RHIRD DBREF2 6V6N B A0A1V2APZ1 26 273 DBREF1 6V6N C 26 273 UNP A0A1V2APZ1_RHIRD DBREF2 6V6N C A0A1V2APZ1 26 273 DBREF1 6V6N D 26 273 UNP A0A1V2APZ1_RHIRD DBREF2 6V6N D A0A1V2APZ1 26 273 SEQADV 6V6N SER A 23 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ASN A 24 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ALA A 25 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N TYR A 195 UNP A0A1V2APZ ASP 195 ENGINEERED MUTATION SEQADV 6V6N SER B 23 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ASN B 24 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ALA B 25 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N TYR B 195 UNP A0A1V2APZ ASP 195 ENGINEERED MUTATION SEQADV 6V6N SER C 23 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ASN C 24 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ALA C 25 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N TYR C 195 UNP A0A1V2APZ ASP 195 ENGINEERED MUTATION SEQADV 6V6N SER D 23 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ASN D 24 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N ALA D 25 UNP A0A1V2APZ EXPRESSION TAG SEQADV 6V6N TYR D 195 UNP A0A1V2APZ ASP 195 ENGINEERED MUTATION SEQRES 1 A 251 SER ASN ALA GLN GLN SER GLN ALA PHE GLU CYS THR LEU SEQRES 2 A 251 VAL THR SER ILE GLU THR GLY ALA VAL ILE ASN GLN GLN SEQRES 3 A 251 GLY ALA CYS ASP GLN ARG VAL ALA PRO ALA SER THR PHE SEQRES 4 A 251 KCX VAL PRO LEU ALA LEU ILE GLY TYR ASP ALA GLY ILE SEQRES 5 A 251 LEU LEU ASP ASP LYS THR PRO ALA TRP ASP TRP LYS PRO SEQRES 6 A 251 GLY THR GLU ALA ARG ALA GLN ASP ARG LYS THR VAL ASP SEQRES 7 A 251 PRO THR ILE TRP GLU GLN ASP SER VAL LEU TRP TYR SER SEQRES 8 A 251 ARG GLU LEU THR ARG ARG LEU GLY PRO GLU LYS PHE ALA SEQRES 9 A 251 ALA TYR VAL LYS ARG LEU GLY TYR GLY ASN ALA ASP VAL SEQRES 10 A 251 SER GLY GLU PRO GLY LYS ASN ASN GLY LEU THR HIS SER SEQRES 11 A 251 TRP LEU GLY ALA SER LEU THR VAL SER PRO VAL GLU GLN SEQRES 12 A 251 VAL GLY PHE ILE ARG ARG LEU LEU ALA GLY ASN LEU PRO SEQRES 13 A 251 VAL SER ARG ASP ALA GLN ALA LYS THR ARG ALA ILE VAL SEQRES 14 A 251 PRO VAL PHE TYR ALA PRO GLU SER TRP SER VAL HIS GLY SEQRES 15 A 251 LYS THR GLY THR GLY PHE MSE ARG ASP GLU LYS GLY ASN SEQRES 16 A 251 PRO ASP ARG SER ARG PRO PHE GLY TRP PHE VAL GLY TRP SEQRES 17 A 251 ALA GLU ARG GLU GLY GLN HIS ILE VAL PHE ALA ARG LEU SEQRES 18 A 251 ARG VAL ALA ASP LYS PRO SER SER GLU PRO LEU GLY PRO SEQRES 19 A 251 ALA VAL ARG ASP ALA PHE LEU ARG ASP ILE ALA ARG LEU SEQRES 20 A 251 ALA VAL HIS ARG SEQRES 1 B 251 SER ASN ALA GLN GLN SER GLN ALA PHE GLU CYS THR LEU SEQRES 2 B 251 VAL THR SER ILE GLU THR GLY ALA VAL ILE ASN GLN GLN SEQRES 3 B 251 GLY ALA CYS ASP GLN ARG VAL ALA PRO ALA SER THR PHE SEQRES 4 B 251 KCX VAL PRO LEU ALA LEU ILE GLY TYR ASP ALA GLY ILE SEQRES 5 B 251 LEU LEU ASP ASP LYS THR PRO ALA TRP ASP TRP LYS PRO SEQRES 6 B 251 GLY THR GLU ALA ARG ALA GLN ASP ARG LYS THR VAL ASP SEQRES 7 B 251 PRO THR ILE TRP GLU GLN ASP SER VAL LEU TRP TYR SER SEQRES 8 B 251 ARG GLU LEU THR ARG ARG LEU GLY PRO GLU LYS PHE ALA SEQRES 9 B 251 ALA TYR VAL LYS ARG LEU GLY TYR GLY ASN ALA ASP VAL SEQRES 10 B 251 SER GLY GLU PRO GLY LYS ASN ASN GLY LEU THR HIS SER SEQRES 11 B 251 TRP LEU GLY ALA SER LEU THR VAL SER PRO VAL GLU GLN SEQRES 12 B 251 VAL GLY PHE ILE ARG ARG LEU LEU ALA GLY ASN LEU PRO SEQRES 13 B 251 VAL SER ARG ASP ALA GLN ALA LYS THR ARG ALA ILE VAL SEQRES 14 B 251 PRO VAL PHE TYR ALA PRO GLU SER TRP SER VAL HIS GLY SEQRES 15 B 251 LYS THR GLY THR GLY PHE MSE ARG ASP GLU LYS GLY ASN SEQRES 16 B 251 PRO ASP ARG SER ARG PRO PHE GLY TRP PHE VAL GLY TRP SEQRES 17 B 251 ALA GLU ARG GLU GLY GLN HIS ILE VAL PHE ALA ARG LEU SEQRES 18 B 251 ARG VAL ALA ASP LYS PRO SER SER GLU PRO LEU GLY PRO SEQRES 19 B 251 ALA VAL ARG ASP ALA PHE LEU ARG ASP ILE ALA ARG LEU SEQRES 20 B 251 ALA VAL HIS ARG SEQRES 1 C 251 SER ASN ALA GLN GLN SER GLN ALA PHE GLU CYS THR LEU SEQRES 2 C 251 VAL THR SER ILE GLU THR GLY ALA VAL ILE ASN GLN GLN SEQRES 3 C 251 GLY ALA CYS ASP GLN ARG VAL ALA PRO ALA SER THR PHE SEQRES 4 C 251 KCX VAL PRO LEU ALA LEU ILE GLY TYR ASP ALA GLY ILE SEQRES 5 C 251 LEU LEU ASP ASP LYS THR PRO ALA TRP ASP TRP LYS PRO SEQRES 6 C 251 GLY THR GLU ALA ARG ALA GLN ASP ARG LYS THR VAL ASP SEQRES 7 C 251 PRO THR ILE TRP GLU GLN ASP SER VAL LEU TRP TYR SER SEQRES 8 C 251 ARG GLU LEU THR ARG ARG LEU GLY PRO GLU LYS PHE ALA SEQRES 9 C 251 ALA TYR VAL LYS ARG LEU GLY TYR GLY ASN ALA ASP VAL SEQRES 10 C 251 SER GLY GLU PRO GLY LYS ASN ASN GLY LEU THR HIS SER SEQRES 11 C 251 TRP LEU GLY ALA SER LEU THR VAL SER PRO VAL GLU GLN SEQRES 12 C 251 VAL GLY PHE ILE ARG ARG LEU LEU ALA GLY ASN LEU PRO SEQRES 13 C 251 VAL SER ARG ASP ALA GLN ALA LYS THR ARG ALA ILE VAL SEQRES 14 C 251 PRO VAL PHE TYR ALA PRO GLU SER TRP SER VAL HIS GLY SEQRES 15 C 251 LYS THR GLY THR GLY PHE MSE ARG ASP GLU LYS GLY ASN SEQRES 16 C 251 PRO ASP ARG SER ARG PRO PHE GLY TRP PHE VAL GLY TRP SEQRES 17 C 251 ALA GLU ARG GLU GLY GLN HIS ILE VAL PHE ALA ARG LEU SEQRES 18 C 251 ARG VAL ALA ASP LYS PRO SER SER GLU PRO LEU GLY PRO SEQRES 19 C 251 ALA VAL ARG ASP ALA PHE LEU ARG ASP ILE ALA ARG LEU SEQRES 20 C 251 ALA VAL HIS ARG SEQRES 1 D 251 SER ASN ALA GLN GLN SER GLN ALA PHE GLU CYS THR LEU SEQRES 2 D 251 VAL THR SER ILE GLU THR GLY ALA VAL ILE ASN GLN GLN SEQRES 3 D 251 GLY ALA CYS ASP GLN ARG VAL ALA PRO ALA SER THR PHE SEQRES 4 D 251 KCX VAL PRO LEU ALA LEU ILE GLY TYR ASP ALA GLY ILE SEQRES 5 D 251 LEU LEU ASP ASP LYS THR PRO ALA TRP ASP TRP LYS PRO SEQRES 6 D 251 GLY THR GLU ALA ARG ALA GLN ASP ARG LYS THR VAL ASP SEQRES 7 D 251 PRO THR ILE TRP GLU GLN ASP SER VAL LEU TRP TYR SER SEQRES 8 D 251 ARG GLU LEU THR ARG ARG LEU GLY PRO GLU LYS PHE ALA SEQRES 9 D 251 ALA TYR VAL LYS ARG LEU GLY TYR GLY ASN ALA ASP VAL SEQRES 10 D 251 SER GLY GLU PRO GLY LYS ASN ASN GLY LEU THR HIS SER SEQRES 11 D 251 TRP LEU GLY ALA SER LEU THR VAL SER PRO VAL GLU GLN SEQRES 12 D 251 VAL GLY PHE ILE ARG ARG LEU LEU ALA GLY ASN LEU PRO SEQRES 13 D 251 VAL SER ARG ASP ALA GLN ALA LYS THR ARG ALA ILE VAL SEQRES 14 D 251 PRO VAL PHE TYR ALA PRO GLU SER TRP SER VAL HIS GLY SEQRES 15 D 251 LYS THR GLY THR GLY PHE MSE ARG ASP GLU LYS GLY ASN SEQRES 16 D 251 PRO ASP ARG SER ARG PRO PHE GLY TRP PHE VAL GLY TRP SEQRES 17 D 251 ALA GLU ARG GLU GLY GLN HIS ILE VAL PHE ALA ARG LEU SEQRES 18 D 251 ARG VAL ALA ASP LYS PRO SER SER GLU PRO LEU GLY PRO SEQRES 19 D 251 ALA VAL ARG ASP ALA PHE LEU ARG ASP ILE ALA ARG LEU SEQRES 20 D 251 ALA VAL HIS ARG MODRES 6V6N KCX A 62 LYS MODIFIED RESIDUE MODRES 6V6N MSE A 211 MET MODIFIED RESIDUE MODRES 6V6N KCX B 62 LYS MODIFIED RESIDUE MODRES 6V6N MSE B 211 MET MODIFIED RESIDUE MODRES 6V6N KCX C 62 LYS MODIFIED RESIDUE MODRES 6V6N MSE C 211 MET MODIFIED RESIDUE MODRES 6V6N KCX D 62 LYS MODIFIED RESIDUE MODRES 6V6N MSE D 211 MET MODIFIED RESIDUE HET KCX A 62 12 HET MSE A 211 8 HET KCX B 62 12 HET MSE B 211 8 HET KCX C 62 12 HET MSE C 211 8 HET KCX D 62 12 HET MSE D 211 8 HET GOL A 301 6 HET FMT A 302 3 HET GOL B 301 6 HET GOL C 301 6 HET SO4 C 302 5 HET GOL D 301 6 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 KCX 4(C7 H14 N2 O4) FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 6 FMT C H2 O2 FORMUL 9 SO4 O4 S 2- FORMUL 11 HOH *391(H2 O) HELIX 1 AA1 PRO A 57 THR A 60 5 4 HELIX 2 AA2 PHE A 61 GLY A 73 1 13 HELIX 3 AA3 ARG A 92 ARG A 96 5 5 HELIX 4 AA4 ASP A 100 SER A 108 1 9 HELIX 5 AA5 VAL A 109 GLY A 121 1 13 HELIX 6 AA6 GLY A 121 GLY A 133 1 13 HELIX 7 AA7 ASN A 147 SER A 152 1 6 HELIX 8 AA8 SER A 161 GLY A 175 1 15 HELIX 9 AA9 SER A 180 VAL A 191 1 12 HELIX 10 AB1 PRO A 253 ALA A 270 1 18 HELIX 11 AB2 PRO B 57 THR B 60 5 4 HELIX 12 AB3 PHE B 61 ALA B 72 1 12 HELIX 13 AB4 ARG B 92 ARG B 96 5 5 HELIX 14 AB5 ASP B 100 SER B 108 1 9 HELIX 15 AB6 VAL B 109 GLY B 133 1 25 HELIX 16 AB7 ASN B 147 SER B 152 1 6 HELIX 17 AB8 SER B 161 GLY B 175 1 15 HELIX 18 AB9 SER B 180 VAL B 191 1 12 HELIX 19 AC1 PRO B 253 ALA B 270 1 18 HELIX 20 AC2 PRO C 57 THR C 60 5 4 HELIX 21 AC3 PHE C 61 ALA C 72 1 12 HELIX 22 AC4 ARG C 92 ARG C 96 5 5 HELIX 23 AC5 ASP C 100 SER C 108 1 9 HELIX 24 AC6 VAL C 109 GLY C 133 1 25 HELIX 25 AC7 ASN C 147 SER C 152 1 6 HELIX 26 AC8 SER C 161 GLY C 175 1 15 HELIX 27 AC9 SER C 180 ILE C 190 1 11 HELIX 28 AD1 PRO C 253 ALA C 270 1 18 HELIX 29 AD2 PRO D 57 THR D 60 5 4 HELIX 30 AD3 PHE D 61 ALA D 72 1 12 HELIX 31 AD4 ARG D 92 ARG D 96 5 5 HELIX 32 AD5 ASP D 100 SER D 108 1 9 HELIX 33 AD6 VAL D 109 GLY D 121 1 13 HELIX 34 AD7 GLY D 121 GLY D 133 1 13 HELIX 35 AD8 ASN D 147 SER D 152 1 6 HELIX 36 AD9 SER D 161 GLY D 175 1 15 HELIX 37 AE1 SER D 180 ILE D 190 1 11 HELIX 38 AE2 PRO D 253 ALA D 270 1 18 SHEET 1 AA1 6 VAL A 44 GLN A 48 0 SHEET 2 AA1 6 PHE A 31 SER A 38 -1 N VAL A 36 O ILE A 45 SHEET 3 AA1 6 GLN A 236 VAL A 245 -1 O VAL A 245 N PHE A 31 SHEET 4 AA1 6 PRO A 218 ARG A 233 -1 N GLY A 229 O PHE A 240 SHEET 5 AA1 6 TRP A 200 ARG A 212 -1 N HIS A 203 O TRP A 230 SHEET 6 AA1 6 VAL A 193 ALA A 196 -1 N PHE A 194 O VAL A 202 SHEET 1 AA2 2 TRP A 83 ASP A 84 0 SHEET 2 AA2 2 THR A 98 VAL A 99 -1 O VAL A 99 N TRP A 83 SHEET 1 AA3 6 VAL B 44 GLN B 48 0 SHEET 2 AA3 6 PHE B 31 SER B 38 -1 N VAL B 36 O ILE B 45 SHEET 3 AA3 6 GLN B 236 VAL B 245 -1 O VAL B 239 N THR B 37 SHEET 4 AA3 6 PRO B 218 ARG B 233 -1 N PHE B 227 O ARG B 242 SHEET 5 AA3 6 TRP B 200 ARG B 212 -1 N GLY B 207 O TRP B 226 SHEET 6 AA3 6 VAL B 193 ALA B 196 -1 N PHE B 194 O VAL B 202 SHEET 1 AA4 2 TRP B 83 ASP B 84 0 SHEET 2 AA4 2 THR B 98 VAL B 99 -1 O VAL B 99 N TRP B 83 SHEET 1 AA5 6 VAL C 44 GLN C 48 0 SHEET 2 AA5 6 PHE C 31 SER C 38 -1 N VAL C 36 O ASN C 46 SHEET 3 AA5 6 GLN C 236 VAL C 245 -1 O VAL C 245 N PHE C 31 SHEET 4 AA5 6 PRO C 218 ARG C 233 -1 N GLY C 229 O PHE C 240 SHEET 5 AA5 6 TRP C 200 ARG C 212 -1 N MSE C 211 O ARG C 222 SHEET 6 AA5 6 VAL C 193 ALA C 196 -1 N PHE C 194 O VAL C 202 SHEET 1 AA6 2 TRP C 83 ASP C 84 0 SHEET 2 AA6 2 THR C 98 VAL C 99 -1 O VAL C 99 N TRP C 83 SHEET 1 AA7 6 VAL D 44 GLN D 48 0 SHEET 2 AA7 6 PHE D 31 SER D 38 -1 N VAL D 36 O ILE D 45 SHEET 3 AA7 6 GLN D 236 VAL D 245 -1 O VAL D 245 N PHE D 31 SHEET 4 AA7 6 PRO D 218 ARG D 233 -1 N GLY D 229 O PHE D 240 SHEET 5 AA7 6 TRP D 200 ARG D 212 -1 N HIS D 203 O TRP D 230 SHEET 6 AA7 6 VAL D 193 ALA D 196 -1 N PHE D 194 O VAL D 202 SHEET 1 AA8 2 TRP D 83 ASP D 84 0 SHEET 2 AA8 2 THR D 98 VAL D 99 -1 O VAL D 99 N TRP D 83 SSBOND 1 CYS A 33 CYS A 51 1555 1555 2.05 SSBOND 2 CYS B 33 CYS B 51 1555 1555 2.04 SSBOND 3 CYS C 33 CYS C 51 1555 1555 2.05 SSBOND 4 CYS D 33 CYS D 51 1555 1555 2.05 LINK C PHE A 61 N KCX A 62 1555 1555 1.33 LINK C KCX A 62 N VAL A 63 1555 1555 1.33 LINK C PHE A 210 N MSE A 211 1555 1555 1.33 LINK C MSE A 211 N ARG A 212 1555 1555 1.33 LINK C PHE B 61 N KCX B 62 1555 1555 1.33 LINK C KCX B 62 N VAL B 63 1555 1555 1.33 LINK C PHE B 210 N MSE B 211 1555 1555 1.33 LINK C MSE B 211 N ARG B 212 1555 1555 1.33 LINK C PHE C 61 N KCX C 62 1555 1555 1.33 LINK C KCX C 62 N VAL C 63 1555 1555 1.33 LINK C PHE C 210 N MSE C 211 1555 1555 1.33 LINK C MSE C 211 N ARG C 212 1555 1555 1.33 LINK C PHE D 61 N KCX D 62 1555 1555 1.33 LINK C KCX D 62 N VAL D 63 1555 1555 1.34 LINK C PHE D 210 N MSE D 211 1555 1555 1.33 LINK C MSE D 211 N ARG D 212 1555 1555 1.33 CISPEP 1 THR A 80 PRO A 81 0 2.07 CISPEP 2 THR B 80 PRO B 81 0 3.61 CISPEP 3 THR C 80 PRO C 81 0 1.84 CISPEP 4 THR D 80 PRO D 81 0 3.73 SITE 1 AC1 4 ASP A 84 LYS A 86 THR A 89 GLU A 115 SITE 1 AC2 3 TRP A 200 ALA A 270 HOH A 426 SITE 1 AC3 4 ASP B 84 LYS B 86 THR B 89 TRP B 111 SITE 1 AC4 6 ASP C 84 TRP C 85 LYS C 86 THR C 89 SITE 2 AC4 6 TRP C 111 HOH C 485 SITE 1 AC5 2 ARG C 118 ARG C 119 SITE 1 AC6 6 ASP D 84 TRP D 85 LYS D 86 THR D 89 SITE 2 AC6 6 TRP D 111 GLU D 115 CRYST1 58.119 101.655 108.142 90.00 97.84 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017206 0.000000 0.002369 0.00000 SCALE2 0.000000 0.009837 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009334 0.00000